>>> py3-bioframe: Building community/py3-bioframe 0.5.0-r1 (using abuild 3.12.0-r0) started Fri, 27 Oct 2023 16:26:02 +0000 >>> py3-bioframe: Checking sanity of /home/buildozer/aports/community/py3-bioframe/APKBUILD... >>> py3-bioframe: Analyzing dependencies... >>> py3-bioframe: Installing for build: build-base py3-matplotlib py3-numpy py3-pandas py3-yaml py3-requests py3-typing-extensions py3-setuptools py3-gpep517 py3-hatchling py3-wheel py3-pytest-xdist (1/116) Installing libbz2 (1.0.8-r6) (2/116) Installing libffi (3.4.4-r3) (3/116) Installing gdbm (1.23-r1) (4/116) Installing xz-libs (5.4.4-r0) (5/116) Installing mpdecimal (2.5.1-r2) (6/116) Installing libpanelw (6.4_p20231007-r0) (7/116) Installing readline (8.2.1-r2) (8/116) Installing sqlite-libs (3.43.2-r0) (9/116) Installing python3 (3.11.6-r1) (10/116) Installing python3-pycache-pyc0 (3.11.6-r1) (11/116) Installing pyc (3.11.6-r1) (12/116) Installing py3-cairo-pyc (1.25.1-r0) (13/116) Installing py3-certifi (2023.7.22-r0) 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(1.6.40-r0) (36/116) Installing freetype (2.13.2-r0) (37/116) Installing libjpeg-turbo (3.0.1-r0) (38/116) Installing lcms2 (2.15-r4) (39/116) Installing openjpeg (2.5.0-r3) (40/116) Installing libsharpyuv (1.3.2-r0) (41/116) Installing libwebp (1.3.2-r0) (42/116) Installing tiff (4.6.0-r0) (43/116) Installing libwebpdemux (1.3.2-r0) (44/116) Installing libwebpmux (1.3.2-r0) (45/116) Installing libxau (1.0.11-r3) (46/116) Installing libmd (1.1.0-r0) (47/116) Installing libbsd (0.11.7-r3) (48/116) Installing libxdmcp (1.1.4-r3) (49/116) Installing libxcb (1.16-r0) (50/116) Installing py3-pillow (10.1.0-r1) (51/116) Installing py3-pillow-pyc (10.1.0-r1) (52/116) Installing py3-tz (2023.3-r1) (53/116) Installing py3-tz-pyc (2023.3-r1) (54/116) Installing tzdata (2023c-r1) (55/116) Installing tcl (8.6.13-r1) (56/116) Installing libx11 (1.8.7-r0) (57/116) Installing libxrender (0.9.11-r4) (58/116) Installing fontconfig (2.14.2-r4) (59/116) Installing libxft (2.3.8-r2) (60/116) Installing tk 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Installing py3-requests-pyc (2.31.0-r1) (84/116) Installing py3-typing-extensions (4.8.0-r0) (85/116) Installing py3-typing-extensions-pyc (4.8.0-r0) (86/116) Installing py3-setuptools (68.2.2-r0) (87/116) Installing py3-setuptools-pyc (68.2.2-r0) (88/116) Installing py3-installer (0.7.0-r1) (89/116) Installing py3-installer-pyc (0.7.0-r1) (90/116) Installing py3-gpep517 (15-r0) (91/116) Installing py3-gpep517-pyc (15-r0) (92/116) Installing py3-editables (0.5-r0) (93/116) Installing py3-editables-pyc (0.5-r0) (94/116) Installing py3-pathspec (0.11.2-r0) (95/116) Installing py3-pathspec-pyc (0.11.2-r0) (96/116) Installing py3-pluggy (1.3.0-r0) (97/116) Installing py3-pluggy-pyc (1.3.0-r0) (98/116) Installing py3-trove-classifiers (2023.10.18-r0) (99/116) Installing py3-trove-classifiers-pyc (2023.10.18-r0) (100/116) Installing py3-hatchling (1.18.0-r0) (101/116) Installing py3-hatchling-pyc (1.18.0-r0) (102/116) Installing py3-wheel (0.41.2-r0) (103/116) Installing py3-wheel-pyc (0.41.2-r0) (104/116) Installing py3-apipkg (2.1.0-r2) (105/116) Installing py3-apipkg-pyc (2.1.0-r2) (106/116) Installing py3-execnet (1.9.0-r2) (107/116) Installing py3-execnet-pyc (1.9.0-r2) (108/116) Installing py3-iniconfig (1.1.1-r6) (109/116) Installing py3-iniconfig-pyc (1.1.1-r6) (110/116) Installing py3-py (1.11.0-r2) (111/116) Installing py3-py-pyc (1.11.0-r2) (112/116) Installing py3-pytest (7.4.2-r0) (113/116) Installing py3-pytest-pyc (7.4.2-r0) (114/116) Installing py3-pytest-xdist (3.3.1-r0) (115/116) Installing py3-pytest-xdist-pyc (3.3.1-r0) (116/116) Installing .makedepends-py3-bioframe (20231027.162603) Executing busybox-1.36.1-r13.trigger OK: 667 MiB in 222 packages >>> py3-bioframe: Cleaning up srcdir >>> py3-bioframe: Cleaning up pkgdir >>> py3-bioframe: Cleaning up tmpdir >>> py3-bioframe: Fetching https://distfiles.alpinelinux.org/distfiles/v3.19/bioframe-0.5.0.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 0 146 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 curl: (22) The requested URL returned error: 404 >>> py3-bioframe: Fetching https://github.com/open2c/bioframe/archive/v0.5.0/bioframe-0.5.0.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 829k 0 829k 0 0 563k 0 --:--:-- 0:00:01 --:--:-- 951k >>> py3-bioframe: Fetching https://distfiles.alpinelinux.org/distfiles/v3.19/bioframe-0.5.0.tar.gz >>> py3-bioframe: Checking sha512sums... bioframe-0.5.0.tar.gz: OK >>> py3-bioframe: Unpacking /var/cache/distfiles/v3.19/bioframe-0.5.0.tar.gz... 2023-10-27 16:26:06,884 gpep517 INFO Building wheel via backend hatchling.build 2023-10-27 16:26:06,945 gpep517 INFO The backend produced .dist/bioframe-0.5.0-py2.py3-none-any.whl bioframe-0.5.0-py2.py3-none-any.whl ============================= test session starts ============================== platform linux -- Python 3.11.6, pytest-7.4.2, pluggy-1.3.0 rootdir: /home/buildozer/aports/community/py3-bioframe/src/bioframe-0.5.0 plugins: xdist-3.3.1 created: 8/8 workers 8 workers [57 items] ...........sss........................................... [100%] =============================== warnings summary =============================== bioframe/io/assembly.py:4 bioframe/io/assembly.py:4 bioframe/io/assembly.py:4 bioframe/io/assembly.py:4 bioframe/io/assembly.py:4 bioframe/io/assembly.py:4 bioframe/io/assembly.py:4 bioframe/io/assembly.py:4 /home/buildozer/aports/community/py3-bioframe/src/bioframe-0.5.0/bioframe/io/assembly.py:4: DeprecationWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html import pkg_resources ../../../../../../../usr/lib/python3.11/site-packages/pkg_resources/__init__.py:2871 ../../../../../../../usr/lib/python3.11/site-packages/pkg_resources/__init__.py:2871 ../../../../../../../usr/lib/python3.11/site-packages/pkg_resources/__init__.py:2871 ../../../../../../../usr/lib/python3.11/site-packages/pkg_resources/__init__.py:2871 ../../../../../../../usr/lib/python3.11/site-packages/pkg_resources/__init__.py:2871 ../../../../../../../usr/lib/python3.11/site-packages/pkg_resources/__init__.py:2871 ../../../../../../../usr/lib/python3.11/site-packages/pkg_resources/__init__.py:2871 ../../../../../../../usr/lib/python3.11/site-packages/pkg_resources/__init__.py:2871 /usr/lib/python3.11/site-packages/pkg_resources/__init__.py:2871: DeprecationWarning: Deprecated call to `pkg_resources.declare_namespace('mpl_toolkits')`. Implementing implicit namespace packages (as specified in PEP 420) is preferred to `pkg_resources.declare_namespace`. See https://setuptools.pypa.io/en/latest/references/keywords.html#keyword-namespace-packages declare_namespace(pkg) -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html ================== 54 passed, 3 skipped, 16 warnings in 6.12s ================== >>> py3-bioframe: Entering fakeroot... >>> py3-bioframe-pyc*: Running split function pyc... '/home/buildozer/aports/community/py3-bioframe/pkg/py3-bioframe/usr/lib/python3.11/site-packages/bioframe/sandbox/__pycache__' -> '/home/buildozer/aports/community/py3-bioframe/pkg/py3-bioframe-pyc/usr/lib/python3.11/site-packages/bioframe/sandbox/__pycache__' '/home/buildozer/aports/community/py3-bioframe/pkg/py3-bioframe/usr/lib/python3.11/site-packages/bioframe/__pycache__' -> '/home/buildozer/aports/community/py3-bioframe/pkg/py3-bioframe-pyc/usr/lib/python3.11/site-packages/bioframe/__pycache__' '/home/buildozer/aports/community/py3-bioframe/pkg/py3-bioframe/usr/lib/python3.11/site-packages/bioframe/io/__pycache__' -> '/home/buildozer/aports/community/py3-bioframe/pkg/py3-bioframe-pyc/usr/lib/python3.11/site-packages/bioframe/io/__pycache__' '/home/buildozer/aports/community/py3-bioframe/pkg/py3-bioframe/usr/lib/python3.11/site-packages/bioframe/core/__pycache__' -> '/home/buildozer/aports/community/py3-bioframe/pkg/py3-bioframe-pyc/usr/lib/python3.11/site-packages/bioframe/core/__pycache__' >>> py3-bioframe-pyc*: Preparing subpackage py3-bioframe-pyc... >>> py3-bioframe-pyc*: Running postcheck for py3-bioframe-pyc >>> py3-bioframe*: Running postcheck for py3-bioframe >>> py3-bioframe*: Preparing package py3-bioframe... >>> py3-bioframe-pyc*: Tracing dependencies... py3-matplotlib py3-numpy py3-pandas py3-yaml py3-requests py3-typing-extensions py3-setuptools python3~3.11 >>> py3-bioframe-pyc*: Package size: 340.0 KB >>> py3-bioframe-pyc*: Compressing data... >>> py3-bioframe-pyc*: Create checksum... >>> py3-bioframe-pyc*: Create py3-bioframe-pyc-0.5.0-r1.apk >>> py3-bioframe*: Tracing dependencies... py3-matplotlib py3-numpy py3-pandas py3-yaml py3-requests py3-typing-extensions py3-setuptools python3~3.11 >>> py3-bioframe*: Package size: 308.0 KB >>> py3-bioframe*: Compressing data... >>> py3-bioframe*: Create checksum... >>> py3-bioframe*: Create py3-bioframe-0.5.0-r1.apk >>> py3-bioframe: Build complete at Fri, 27 Oct 2023 16:26:13 +0000 elapsed time 0h 0m 11s >>> py3-bioframe: Cleaning up srcdir >>> py3-bioframe: Cleaning up pkgdir >>> py3-bioframe: Uninstalling dependencies... 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