>>> py3-rpy2: Building community/py3-rpy2 3.5.17-r0 (using abuild 3.15.0_rc3-r3) started Thu, 15 May 2025 04:35:05 +0000 >>> py3-rpy2: Validating /home/buildozer/aports/community/py3-rpy2/APKBUILD... >>> py3-rpy2: Analyzing dependencies... >>> py3-rpy2: Installing for build: build-base py3-cffi py3-numpy py3-tz py3-tzlocal py3-jinja2 R py3-gpep517 py3-setuptools py3-wheel python3-dev R-dev libdeflate-dev py3-pytest (1/130) Installing libbz2 (1.0.8-r6) (2/130) Installing libffi (3.4.8-r0) (3/130) Installing gdbm (1.24-r0) (4/130) Installing xz-libs (5.8.1-r0) (5/130) Installing mpdecimal (4.0.0-r0) (6/130) Installing libpanelw (6.5_p20250503-r0) (7/130) Installing sqlite-libs (3.49.2-r0) (8/130) Installing python3 (3.12.10-r0) (9/130) Installing python3-pycache-pyc0 (3.12.10-r0) (10/130) Installing pyc (3.12.10-r0) (11/130) Installing py3-cparser-pyc (2.22-r1) (12/130) Installing py3-cffi-pyc (1.17.1-r1) (13/130) Installing python3-pyc (3.12.10-r0) (14/130) Installing py3-cparser (2.22-r1) (15/130) Installing py3-cffi (1.17.1-r1) (16/130) Installing libquadmath (14.2.0-r6) (17/130) Installing libgfortran (14.2.0-r6) (18/130) Installing openblas (0.3.28-r0) (19/130) Installing py3-numpy (2.2.4-r0) (20/130) Installing py3-numpy-tests (2.2.4-r0) (21/130) Installing py3-numpy-pyc (2.2.4-r0) (22/130) Installing py3-tz (2025.2-r0) (23/130) Installing py3-tz-pyc (2025.2-r0) (24/130) Installing py3-attrs (25.3.0-r0) (25/130) Installing py3-attrs-pyc (25.3.0-r0) (26/130) Installing py3-tzdata (2025.2-r0) (27/130) Installing py3-tzdata-pyc (2025.2-r0) (28/130) Installing py3-tzlocal (5.3-r0) (29/130) Installing py3-tzlocal-pyc (5.3-r0) (30/130) Installing py3-markupsafe (3.0.2-r0) (31/130) Installing py3-markupsafe-pyc (3.0.2-r0) (32/130) Installing py3-jinja2 (3.1.6-r0) (33/130) Installing py3-jinja2-pyc (3.1.6-r0) (34/130) Installing R-mathlib (4.5.0-r0) (35/130) Installing tzdata (2025b-r0) (36/130) Installing libxau (1.0.12-r0) (37/130) Installing libmd (1.1.0-r0) (38/130) Installing libbsd (0.12.2-r0) (39/130) Installing libxdmcp (1.1.5-r1) (40/130) Installing libxcb (1.17.0-r0) (41/130) Installing libx11 (1.8.11-r0) (42/130) Installing libxext (1.3.6-r2) (43/130) Installing libice (1.1.2-r0) (44/130) Installing libuuid (2.41-r7) (45/130) Installing libsm (1.2.5-r0) (46/130) Installing libxt (1.3.1-r0) (47/130) Installing libxmu (1.2.1-r0) (48/130) Installing libxrender (0.9.12-r0) (49/130) Installing libpng (1.6.47-r0) (50/130) Installing freetype (2.13.3-r0) (51/130) Installing fontconfig (2.15.0-r3) (52/130) Installing pixman (0.46.0-r0) (53/130) Installing cairo (1.18.2-r1) (54/130) Installing libdeflate (1.23-r0) (55/130) Installing libintl (0.24.1-r0) (56/130) Installing libeconf (0.6.3-r0) (57/130) Installing libblkid (2.41-r7) (58/130) Installing libmount (2.41-r7) (59/130) Installing glib (2.84.1-r0) (60/130) Installing icu-data-en (76.1-r0) Executing icu-data-en-76.1-r0.post-install * * If you need ICU with non-English locales and legacy charset support, install * package icu-data-full. * (61/130) Installing icu-libs (76.1-r0) (62/130) Installing libjpeg-turbo (3.1.0-r0) (63/130) Installing libxft (2.3.8-r3) (64/130) Installing fribidi (1.0.16-r0) (65/130) Installing graphite2 (1.3.14-r6) (66/130) Installing harfbuzz (11.2.1-r0) (67/130) Installing pango (1.56.3-r0) (68/130) Installing tcl (8.6.16-r0) (69/130) Installing libsharpyuv (1.5.0-r0) (70/130) Installing libwebp (1.5.0-r0) (71/130) Installing tiff (4.7.0-r0) (72/130) Installing tk (8.6.16-r0) (73/130) Installing R (4.5.0-r0) Executing R-4.5.0-r0.post-install * * If you want to install R packages from CRAN that contains native extensions, * then you must also install R-dev. * * To avoid warnings about R.css when installing R extensions also install R-doc. * (74/130) Installing py3-installer (0.7.0-r2) (75/130) Installing py3-installer-pyc (0.7.0-r2) (76/130) Installing py3-gpep517 (19-r0) (77/130) Installing py3-gpep517-pyc (19-r0) (78/130) Installing py3-parsing (3.2.3-r0) (79/130) Installing py3-parsing-pyc (3.2.3-r0) (80/130) Installing py3-packaging (25.0-r0) (81/130) Installing py3-packaging-pyc (25.0-r0) (82/130) Installing py3-setuptools (80.5.0-r0) (83/130) Installing py3-setuptools-pyc (80.5.0-r0) (84/130) Installing py3-wheel (0.46.1-r0) (85/130) Installing py3-wheel-pyc (0.46.1-r0) (86/130) Installing python3-dev (3.12.10-r0) (87/130) Installing bzip2-dev (1.0.8-r6) (88/130) Installing brotli (1.1.0-r2) (89/130) Installing brotli-dev (1.1.0-r2) (90/130) Installing c-ares-dev (1.34.5-r0) (91/130) Installing libidn2-dev (2.3.7-r0) (92/130) Installing libpsl-utils (0.21.5-r3) (93/130) Installing libpsl-dev (0.21.5-r3) (94/130) Installing nghttp2-dev (1.65.0-r0) (95/130) Installing openssl-dev (3.5.0-r0) (96/130) Installing zlib-dev (1.3.1-r2) (97/130) Installing zstd (1.5.7-r0) (98/130) Installing zstd-dev (1.5.7-r0) (99/130) Installing curl-dev (8.13.0-r1) (100/130) Installing gfortran (14.2.0-r6) (101/130) Installing icu (76.1-r0) (102/130) Installing icu-dev (76.1-r0) (103/130) Installing libdeflate-dev (1.23-r0) (104/130) Installing libpng-dev (1.6.47-r0) (105/130) Installing liblapack (0.3.28-r0) (106/130) Installing liblapacke (0.3.28-r0) (107/130) Installing openblas-dev (0.3.28-r0) (108/130) Installing bsd-compat-headers (0.7.2-r6) (109/130) Installing libformw (6.5_p20250503-r0) (110/130) Installing libmenuw (6.5_p20250503-r0) (111/130) Installing libncurses++ (6.5_p20250503-r0) (112/130) Installing ncurses-dev (6.5_p20250503-r0) (113/130) Installing libedit-dev (20250104.3.1-r0) (114/130) Installing libpcre2-16 (10.43-r1) (115/130) Installing libpcre2-32 (10.43-r1) (116/130) Installing pcre2-dev (10.43-r1) (117/130) Installing libhistory (8.2.13-r0) (118/130) Installing readline-dev (8.2.13-r0) (119/130) Installing xz (5.8.1-r0) (120/130) Installing xz-dev (5.8.1-r0) (121/130) Installing R-dev (4.5.0-r0) (122/130) Installing py3-iniconfig (2.1.0-r0) (123/130) Installing py3-iniconfig-pyc (2.1.0-r0) (124/130) Installing py3-pluggy (1.5.0-r0) (125/130) Installing py3-pluggy-pyc (1.5.0-r0) (126/130) Installing py3-py (1.11.0-r4) (127/130) Installing py3-py-pyc (1.11.0-r4) (128/130) Installing py3-pytest (8.3.5-r0) (129/130) Installing py3-pytest-pyc (8.3.5-r0) (130/130) Installing .makedepends-py3-rpy2 (20250515.043521) Executing busybox-1.37.0-r17.trigger Executing glib-2.84.1-r0.trigger OK: 687 MiB in 234 packages >>> py3-rpy2: Cleaning up srcdir >>> py3-rpy2: Cleaning up pkgdir >>> py3-rpy2: Cleaning up tmpdir >>> py3-rpy2: Fetching https://distfiles.alpinelinux.org/distfiles/v3.22/py3-rpy2-3.5.17.tar.gz >>> py3-rpy2: Fetching https://distfiles.alpinelinux.org/distfiles/v3.22/py3-rpy2-3.5.17.tar.gz >>> py3-rpy2: Checking sha512sums... py3-rpy2-3.5.17.tar.gz: OK >>> py3-rpy2: Unpacking /var/cache/distfiles/v3.22/py3-rpy2-3.5.17.tar.gz... 2025-05-15 04:35:24,590 gpep517 INFO Building wheel via backend setuptools.build_meta 2025-05-15 04:35:24,617 situation INFO R home found: /usr/lib/R 2025-05-15 04:35:24,617 situation INFO cffi mode is CFFI_MODE.ANY 2025-05-15 04:35:24,618 situation INFO R exec path: /usr/lib/R/bin/R 2025-05-15 04:35:24,644 situation INFO R exec path: /usr/lib/R/bin/R 2025-05-15 04:35:24,670 root INFO creating /tmp/tmp_pw_r_5b3niaaf/tmp/tmp_pw_r_5b3niaaf 2025-05-15 04:35:24,670 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/R -c /tmp/tmp_pw_r_5b3niaaf/test_pw_r.c -o /tmp/tmp_pw_r_5b3niaaf/tmp/tmp_pw_r_5b3niaaf/test_pw_r.o 2025-05-15 04:35:24,701 root INFO cc /tmp/tmp_pw_r_5b3niaaf/tmp/tmp_pw_r_5b3niaaf/test_pw_r.o -L/usr/lib/R/lib -lR -lpcre2-8 -ldeflate -lzstd -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n -o /tmp/tmp_pw_r_5b3niaaf/test_pw_r 2025-05-15 04:35:24,754 situation INFO cffi mode is CFFI_MODE.ANY 2025-05-15 04:35:24,857 situation INFO R home found: /usr/lib/R 2025-05-15 04:35:24,858 situation INFO R exec path: /usr/lib/R/bin/R 2025-05-15 04:35:24,884 situation INFO R exec path: /usr/lib/R/bin/R 2025-05-15 04:35:24,909 situation INFO R exec path: /usr/lib/R/bin/R 2025-05-15 04:35:24,932 situation INFO R exec path: /usr/lib/R/bin/R 2025-05-15 04:35:25,055 situation INFO cffi mode is CFFI_MODE.ANY 2025-05-15 04:35:25,122 situation INFO R home found: /usr/lib/R 2025-05-15 04:35:25,122 situation INFO R exec path: /usr/lib/R/bin/R 2025-05-15 04:35:25,145 situation INFO R exec path: /usr/lib/R/bin/R 2025-05-15 04:35:25,168 situation INFO R exec path: /usr/lib/R/bin/R 2025-05-15 04:35:25,187 situation INFO R exec path: /usr/lib/R/bin/R /usr/lib/python3.12/site-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated !! ******************************************************************************** Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). By 2026-Feb-18, you need to update your project and remove deprecated calls or your builds will no longer be supported. See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! corresp(dist, value, root_dir) /usr/lib/python3.12/site-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: GNU General Public License v2 or later (GPLv2+) See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! dist._finalize_license_expression() /usr/lib/python3.12/site-packages/setuptools/dist.py:761: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: GNU General Public License v2 or later (GPLv2+) See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! self._finalize_license_expression() 2025-05-15 04:35:25,346 root INFO running bdist_wheel 2025-05-15 04:35:25,361 root INFO running build 2025-05-15 04:35:25,361 root INFO running build_py 2025-05-15 04:35:25,361 root WARNING file _rinterface_cffi_abi.py (for module _rinterface_cffi_abi) not found 2025-05-15 04:35:25,362 root INFO creating build/lib.linux-i686-cpython-312/rpy2 2025-05-15 04:35:25,362 root INFO copying rpy2/_rinterface_cffi_build.py -> build/lib.linux-i686-cpython-312/rpy2 2025-05-15 04:35:25,362 root INFO copying rpy2/situation.py -> build/lib.linux-i686-cpython-312/rpy2 2025-05-15 04:35:25,363 root INFO copying rpy2/__init__.py -> build/lib.linux-i686-cpython-312/rpy2 2025-05-15 04:35:25,363 root INFO copying rpy2/rinterface.py -> build/lib.linux-i686-cpython-312/rpy2 2025-05-15 04:35:25,364 root INFO creating build/lib.linux-i686-cpython-312/rpy2/rlike 2025-05-15 04:35:25,364 root INFO copying rpy2/rlike/indexing.py -> build/lib.linux-i686-cpython-312/rpy2/rlike 2025-05-15 04:35:25,364 root INFO copying rpy2/rlike/container.py -> build/lib.linux-i686-cpython-312/rpy2/rlike 2025-05-15 04:35:25,365 root INFO copying rpy2/rlike/__init__.py -> build/lib.linux-i686-cpython-312/rpy2/rlike 2025-05-15 04:35:25,365 root INFO copying rpy2/rlike/functional.py -> build/lib.linux-i686-cpython-312/rpy2/rlike 2025-05-15 04:35:25,366 root INFO creating build/lib.linux-i686-cpython-312/rpy2/rinterface_lib 2025-05-15 04:35:25,366 root INFO copying rpy2/rinterface_lib/bufferprotocol.py -> build/lib.linux-i686-cpython-312/rpy2/rinterface_lib 2025-05-15 04:35:25,366 root INFO copying rpy2/rinterface_lib/ffi_proxy.py -> build/lib.linux-i686-cpython-312/rpy2/rinterface_lib 2025-05-15 04:35:25,367 root INFO copying rpy2/rinterface_lib/__init__.py -> build/lib.linux-i686-cpython-312/rpy2/rinterface_lib 2025-05-15 04:35:25,367 root INFO copying rpy2/rinterface_lib/sexp.py -> build/lib.linux-i686-cpython-312/rpy2/rinterface_lib 2025-05-15 04:35:25,367 root INFO copying rpy2/rinterface_lib/na_values.py -> build/lib.linux-i686-cpython-312/rpy2/rinterface_lib 2025-05-15 04:35:25,368 root INFO copying rpy2/rinterface_lib/embedded_mswin.py -> build/lib.linux-i686-cpython-312/rpy2/rinterface_lib 2025-05-15 04:35:25,368 root INFO copying rpy2/rinterface_lib/_rinterface_capi.py -> build/lib.linux-i686-cpython-312/rpy2/rinterface_lib 2025-05-15 04:35:25,368 root INFO copying rpy2/rinterface_lib/embedded.py -> build/lib.linux-i686-cpython-312/rpy2/rinterface_lib 2025-05-15 04:35:25,369 root INFO copying rpy2/rinterface_lib/memorymanagement.py -> build/lib.linux-i686-cpython-312/rpy2/rinterface_lib 2025-05-15 04:35:25,369 root INFO copying rpy2/rinterface_lib/conversion.py -> build/lib.linux-i686-cpython-312/rpy2/rinterface_lib 2025-05-15 04:35:25,369 root INFO copying rpy2/rinterface_lib/callbacks.py -> build/lib.linux-i686-cpython-312/rpy2/rinterface_lib 2025-05-15 04:35:25,370 root INFO copying rpy2/rinterface_lib/openrlib.py -> build/lib.linux-i686-cpython-312/rpy2/rinterface_lib 2025-05-15 04:35:25,370 root INFO creating build/lib.linux-i686-cpython-312/rpy2/robjects 2025-05-15 04:35:25,371 root INFO copying rpy2/robjects/environments.py -> build/lib.linux-i686-cpython-312/rpy2/robjects 2025-05-15 04:35:25,371 root INFO copying rpy2/robjects/numpy2ri.py -> build/lib.linux-i686-cpython-312/rpy2/robjects 2025-05-15 04:35:25,371 root INFO copying rpy2/robjects/language.py -> build/lib.linux-i686-cpython-312/rpy2/robjects 2025-05-15 04:35:25,372 root INFO copying rpy2/robjects/constants.py -> build/lib.linux-i686-cpython-312/rpy2/robjects 2025-05-15 04:35:25,372 root INFO copying rpy2/robjects/robject.py -> build/lib.linux-i686-cpython-312/rpy2/robjects 2025-05-15 04:35:25,372 root INFO copying rpy2/robjects/__init__.py -> build/lib.linux-i686-cpython-312/rpy2/robjects 2025-05-15 04:35:25,373 root INFO copying rpy2/robjects/help.py -> build/lib.linux-i686-cpython-312/rpy2/robjects 2025-05-15 04:35:25,373 root INFO copying rpy2/robjects/pandas2ri.py -> build/lib.linux-i686-cpython-312/rpy2/robjects 2025-05-15 04:35:25,373 root INFO copying rpy2/robjects/vectors.py -> build/lib.linux-i686-cpython-312/rpy2/robjects 2025-05-15 04:35:25,374 root INFO copying rpy2/robjects/packages_utils.py -> build/lib.linux-i686-cpython-312/rpy2/robjects 2025-05-15 04:35:25,374 root INFO copying rpy2/robjects/conversion.py -> build/lib.linux-i686-cpython-312/rpy2/robjects 2025-05-15 04:35:25,375 root INFO copying rpy2/robjects/functions.py -> build/lib.linux-i686-cpython-312/rpy2/robjects 2025-05-15 04:35:25,375 root INFO copying rpy2/robjects/methods.py -> build/lib.linux-i686-cpython-312/rpy2/robjects 2025-05-15 04:35:25,375 root INFO copying rpy2/robjects/packages.py -> build/lib.linux-i686-cpython-312/rpy2/robjects 2025-05-15 04:35:25,376 root INFO creating build/lib.linux-i686-cpython-312/rpy2/robjects/lib 2025-05-15 04:35:25,376 root INFO copying rpy2/robjects/lib/grid.py -> build/lib.linux-i686-cpython-312/rpy2/robjects/lib 2025-05-15 04:35:25,376 root INFO copying rpy2/robjects/lib/dbplyr.py -> build/lib.linux-i686-cpython-312/rpy2/robjects/lib 2025-05-15 04:35:25,377 root INFO copying rpy2/robjects/lib/__init__.py -> build/lib.linux-i686-cpython-312/rpy2/robjects/lib 2025-05-15 04:35:25,377 root INFO copying rpy2/robjects/lib/grdevices.py -> build/lib.linux-i686-cpython-312/rpy2/robjects/lib 2025-05-15 04:35:25,377 root INFO copying rpy2/robjects/lib/tidyr.py -> build/lib.linux-i686-cpython-312/rpy2/robjects/lib 2025-05-15 04:35:25,378 root INFO copying rpy2/robjects/lib/dplyr.py -> build/lib.linux-i686-cpython-312/rpy2/robjects/lib 2025-05-15 04:35:25,378 root INFO copying rpy2/robjects/lib/ggplot2.py -> build/lib.linux-i686-cpython-312/rpy2/robjects/lib 2025-05-15 04:35:25,379 root INFO creating build/lib.linux-i686-cpython-312/rpy2/interactive 2025-05-15 04:35:25,379 root INFO copying rpy2/interactive/__init__.py -> build/lib.linux-i686-cpython-312/rpy2/interactive 2025-05-15 04:35:25,379 root INFO copying rpy2/interactive/process_revents.py -> build/lib.linux-i686-cpython-312/rpy2/interactive 2025-05-15 04:35:25,379 root INFO copying rpy2/interactive/packages.py -> build/lib.linux-i686-cpython-312/rpy2/interactive 2025-05-15 04:35:25,380 root INFO creating build/lib.linux-i686-cpython-312/rpy2/ipython 2025-05-15 04:35:25,380 root INFO copying rpy2/ipython/__init__.py -> build/lib.linux-i686-cpython-312/rpy2/ipython 2025-05-15 04:35:25,380 root INFO copying rpy2/ipython/html.py -> build/lib.linux-i686-cpython-312/rpy2/ipython 2025-05-15 04:35:25,381 root INFO copying rpy2/ipython/rmagic.py -> build/lib.linux-i686-cpython-312/rpy2/ipython 2025-05-15 04:35:25,381 root INFO copying rpy2/ipython/ggplot.py -> build/lib.linux-i686-cpython-312/rpy2/ipython 2025-05-15 04:35:25,382 root INFO creating build/lib.linux-i686-cpython-312/rpy2/tests 2025-05-15 04:35:25,382 root INFO copying rpy2/tests/utils.py -> build/lib.linux-i686-cpython-312/rpy2/tests 2025-05-15 04:35:25,382 root INFO copying rpy2/tests/__init__.py -> build/lib.linux-i686-cpython-312/rpy2/tests 2025-05-15 04:35:25,383 root INFO creating build/lib.linux-i686-cpython-312/rpy2/tests/rinterface 2025-05-15 04:35:25,383 root INFO copying rpy2/tests/rinterface/test_noinitialization.py -> build/lib.linux-i686-cpython-312/rpy2/tests/rinterface 2025-05-15 04:35:25,383 root INFO copying rpy2/tests/rinterface/test_openrlib.py -> build/lib.linux-i686-cpython-312/rpy2/tests/rinterface 2025-05-15 04:35:25,383 root INFO copying rpy2/tests/rinterface/test_vector_lang.py -> build/lib.linux-i686-cpython-312/rpy2/tests/rinterface 2025-05-15 04:35:25,384 root INFO copying rpy2/tests/rinterface/test_vector_numpy.py -> build/lib.linux-i686-cpython-312/rpy2/tests/rinterface 2025-05-15 04:35:25,384 root INFO copying rpy2/tests/rinterface/test_endr.py -> build/lib.linux-i686-cpython-312/rpy2/tests/rinterface 2025-05-15 04:35:25,384 root INFO copying rpy2/tests/rinterface/test_memorymanagement.py -> build/lib.linux-i686-cpython-312/rpy2/tests/rinterface 2025-05-15 04:35:25,385 root INFO copying rpy2/tests/rinterface/test_symbol.py -> build/lib.linux-i686-cpython-312/rpy2/tests/rinterface 2025-05-15 04:35:25,385 root INFO copying rpy2/tests/rinterface/test_na.py -> build/lib.linux-i686-cpython-312/rpy2/tests/rinterface 2025-05-15 04:35:25,385 root INFO copying rpy2/tests/rinterface/test_threading.py -> build/lib.linux-i686-cpython-312/rpy2/tests/rinterface 2025-05-15 04:35:25,386 root INFO copying rpy2/tests/rinterface/test_externalptr.py -> build/lib.linux-i686-cpython-312/rpy2/tests/rinterface 2025-05-15 04:35:25,386 root INFO copying rpy2/tests/rinterface/test_vector_float.py -> build/lib.linux-i686-cpython-312/rpy2/tests/rinterface 2025-05-15 04:35:25,386 root INFO copying rpy2/tests/rinterface/test_vector_list.py -> build/lib.linux-i686-cpython-312/rpy2/tests/rinterface 2025-05-15 04:35:25,386 root INFO copying rpy2/tests/rinterface/test_vector_int.py -> build/lib.linux-i686-cpython-312/rpy2/tests/rinterface 2025-05-15 04:35:25,387 root INFO copying rpy2/tests/rinterface/__init__.py -> build/lib.linux-i686-cpython-312/rpy2/tests/rinterface 2025-05-15 04:35:25,387 root INFO copying rpy2/tests/rinterface/test_functions.py -> build/lib.linux-i686-cpython-312/rpy2/tests/rinterface 2025-05-15 04:35:25,387 root INFO copying rpy2/tests/rinterface/test_embedded_r.py -> build/lib.linux-i686-cpython-312/rpy2/tests/rinterface 2025-05-15 04:35:25,388 root INFO copying rpy2/tests/rinterface/test_sexp.py -> build/lib.linux-i686-cpython-312/rpy2/tests/rinterface 2025-05-15 04:35:25,388 root INFO copying rpy2/tests/rinterface/test_vector_str.py -> build/lib.linux-i686-cpython-312/rpy2/tests/rinterface 2025-05-15 04:35:25,388 root INFO copying rpy2/tests/rinterface/test_vector_bool.py -> build/lib.linux-i686-cpython-312/rpy2/tests/rinterface 2025-05-15 04:35:25,388 root INFO copying rpy2/tests/rinterface/test_environment.py -> build/lib.linux-i686-cpython-312/rpy2/tests/rinterface 2025-05-15 04:35:25,389 root INFO copying rpy2/tests/rinterface/test_bufferprotocol.py -> build/lib.linux-i686-cpython-312/rpy2/tests/rinterface 2025-05-15 04:35:25,389 root INFO copying rpy2/tests/rinterface/test_vector_pairlist.py -> build/lib.linux-i686-cpython-312/rpy2/tests/rinterface 2025-05-15 04:35:25,389 root INFO copying rpy2/tests/rinterface/test_callbacks.py -> build/lib.linux-i686-cpython-312/rpy2/tests/rinterface 2025-05-15 04:35:25,390 root INFO copying rpy2/tests/rinterface/test_vectors.py -> build/lib.linux-i686-cpython-312/rpy2/tests/rinterface 2025-05-15 04:35:25,390 root INFO copying rpy2/tests/rinterface/test_conversion.py -> build/lib.linux-i686-cpython-312/rpy2/tests/rinterface 2025-05-15 04:35:25,390 root INFO copying rpy2/tests/rinterface/test_vector_byte.py -> build/lib.linux-i686-cpython-312/rpy2/tests/rinterface 2025-05-15 04:35:25,391 root INFO copying rpy2/tests/rinterface/test_vector_complex.py -> build/lib.linux-i686-cpython-312/rpy2/tests/rinterface 2025-05-15 04:35:25,391 root INFO creating build/lib.linux-i686-cpython-312/rpy2/tests/rlike 2025-05-15 04:35:25,391 root INFO copying rpy2/tests/rlike/test_indexing.py -> build/lib.linux-i686-cpython-312/rpy2/tests/rlike 2025-05-15 04:35:25,392 root INFO copying rpy2/tests/rlike/test_functional.py -> build/lib.linux-i686-cpython-312/rpy2/tests/rlike 2025-05-15 04:35:25,392 root INFO copying rpy2/tests/rlike/test_container.py -> build/lib.linux-i686-cpython-312/rpy2/tests/rlike 2025-05-15 04:35:25,392 root INFO creating build/lib.linux-i686-cpython-312/rpy2/tests/robjects 2025-05-15 04:35:25,393 root INFO copying rpy2/tests/robjects/test_formula.py -> build/lib.linux-i686-cpython-312/rpy2/tests/robjects 2025-05-15 04:35:25,393 root INFO copying rpy2/tests/robjects/test_translated_function.py -> build/lib.linux-i686-cpython-312/rpy2/tests/robjects 2025-05-15 04:35:25,393 root INFO copying rpy2/tests/robjects/test_robjects.py -> build/lib.linux-i686-cpython-312/rpy2/tests/robjects 2025-05-15 04:35:25,394 root INFO copying rpy2/tests/robjects/test_array.py -> build/lib.linux-i686-cpython-312/rpy2/tests/robjects 2025-05-15 04:35:25,394 root INFO copying rpy2/tests/robjects/test_vector_extractdelegator.py -> build/lib.linux-i686-cpython-312/rpy2/tests/robjects 2025-05-15 04:35:25,394 root INFO copying rpy2/tests/robjects/test_vector.py -> build/lib.linux-i686-cpython-312/rpy2/tests/robjects 2025-05-15 04:35:25,395 root INFO copying rpy2/tests/robjects/__init__.py -> build/lib.linux-i686-cpython-312/rpy2/tests/robjects 2025-05-15 04:35:25,395 root INFO copying rpy2/tests/robjects/test_conversion_numpy.py -> build/lib.linux-i686-cpython-312/rpy2/tests/robjects 2025-05-15 04:35:25,395 root INFO copying rpy2/tests/robjects/test_help.py -> build/lib.linux-i686-cpython-312/rpy2/tests/robjects 2025-05-15 04:35:25,395 root INFO copying rpy2/tests/robjects/test_environment.py -> build/lib.linux-i686-cpython-312/rpy2/tests/robjects 2025-05-15 04:35:25,396 root INFO copying rpy2/tests/robjects/test_pandas_conversions.py -> build/lib.linux-i686-cpython-312/rpy2/tests/robjects 2025-05-15 04:35:25,396 root INFO copying rpy2/tests/robjects/test_packages.py -> build/lib.linux-i686-cpython-312/rpy2/tests/robjects 2025-05-15 04:35:25,396 root INFO copying rpy2/tests/robjects/test_serialization.py -> build/lib.linux-i686-cpython-312/rpy2/tests/robjects 2025-05-15 04:35:25,397 root INFO copying rpy2/tests/robjects/test_packages_utils.py -> build/lib.linux-i686-cpython-312/rpy2/tests/robjects 2025-05-15 04:35:25,397 root INFO copying rpy2/tests/robjects/test_methods.py -> build/lib.linux-i686-cpython-312/rpy2/tests/robjects 2025-05-15 04:35:25,397 root INFO copying rpy2/tests/robjects/test_vector_factor.py -> build/lib.linux-i686-cpython-312/rpy2/tests/robjects 2025-05-15 04:35:25,397 root INFO copying rpy2/tests/robjects/test_language.py -> build/lib.linux-i686-cpython-312/rpy2/tests/robjects 2025-05-15 04:35:25,398 root INFO copying rpy2/tests/robjects/test_function.py -> build/lib.linux-i686-cpython-312/rpy2/tests/robjects 2025-05-15 04:35:25,398 root INFO copying rpy2/tests/robjects/test_rs4.py -> build/lib.linux-i686-cpython-312/rpy2/tests/robjects 2025-05-15 04:35:25,399 root INFO copying rpy2/tests/robjects/test_vector_datetime.py -> build/lib.linux-i686-cpython-312/rpy2/tests/robjects 2025-05-15 04:35:25,399 root INFO copying rpy2/tests/robjects/test_dataframe.py -> build/lib.linux-i686-cpython-312/rpy2/tests/robjects 2025-05-15 04:35:25,399 root INFO copying rpy2/tests/robjects/test_conversion.py -> build/lib.linux-i686-cpython-312/rpy2/tests/robjects 2025-05-15 04:35:25,400 root INFO creating build/lib.linux-i686-cpython-312/rpy2/tests/ipython 2025-05-15 04:35:25,400 root INFO copying rpy2/tests/ipython/test_rmagic.py -> build/lib.linux-i686-cpython-312/rpy2/tests/ipython 2025-05-15 04:35:25,400 root INFO copying rpy2/tests/ipython/test_ggplot.py -> build/lib.linux-i686-cpython-312/rpy2/tests/ipython 2025-05-15 04:35:25,401 root INFO copying rpy2/tests/ipython/__init__.py -> build/lib.linux-i686-cpython-312/rpy2/tests/ipython 2025-05-15 04:35:25,401 root INFO copying rpy2/tests/ipython/test_html.py -> build/lib.linux-i686-cpython-312/rpy2/tests/ipython 2025-05-15 04:35:25,401 root INFO creating build/lib.linux-i686-cpython-312/rpy2/tests/robjects/lib 2025-05-15 04:35:25,401 root INFO copying rpy2/tests/robjects/lib/test_grdevices.py -> build/lib.linux-i686-cpython-312/rpy2/tests/robjects/lib 2025-05-15 04:35:25,402 root INFO copying rpy2/tests/robjects/lib/test_tidyr.py -> build/lib.linux-i686-cpython-312/rpy2/tests/robjects/lib 2025-05-15 04:35:25,402 root INFO copying rpy2/tests/robjects/lib/test_dbplyr.py -> build/lib.linux-i686-cpython-312/rpy2/tests/robjects/lib 2025-05-15 04:35:25,402 root INFO copying rpy2/tests/robjects/lib/test_ggplot2.py -> build/lib.linux-i686-cpython-312/rpy2/tests/robjects/lib 2025-05-15 04:35:25,403 root INFO copying rpy2/tests/robjects/lib/__init__.py -> build/lib.linux-i686-cpython-312/rpy2/tests/robjects/lib 2025-05-15 04:35:25,403 root INFO copying rpy2/tests/robjects/lib/test_grid.py -> build/lib.linux-i686-cpython-312/rpy2/tests/robjects/lib 2025-05-15 04:35:25,403 root INFO copying rpy2/tests/robjects/lib/test_dplyr.py -> build/lib.linux-i686-cpython-312/rpy2/tests/robjects/lib 2025-05-15 04:35:25,404 root INFO running egg_info 2025-05-15 04:35:25,409 root INFO writing rpy2.egg-info/PKG-INFO 2025-05-15 04:35:25,417 root INFO writing dependency_links to rpy2.egg-info/dependency_links.txt 2025-05-15 04:35:25,422 root INFO writing requirements to rpy2.egg-info/requires.txt 2025-05-15 04:35:25,422 root INFO writing top-level names to rpy2.egg-info/top_level.txt 2025-05-15 04:35:25,433 root INFO reading manifest file 'rpy2.egg-info/SOURCES.txt' 2025-05-15 04:35:25,437 root INFO reading manifest template 'MANIFEST.in' 2025-05-15 04:35:25,446 root WARNING warning: no files found matching 'README' anywhere in distribution 2025-05-15 04:35:25,446 root WARNING warning: no previously-included files matching '*patch*' found anywhere in distribution 2025-05-15 04:35:25,447 root WARNING warning: no previously-included files matching '*diff*' found anywhere in distribution 2025-05-15 04:35:25,447 root WARNING warning: no previously-included files matching '.hg' found anywhere in distribution 2025-05-15 04:35:25,447 root WARNING warning: no files found matching 'MANIFEST' 2025-05-15 04:35:25,447 root WARNING warning: no files found matching '_rinterface_cffi_build' 2025-05-15 04:35:25,448 root WARNING warning: no files found matching 'rpy/__init__.py' 2025-05-15 04:35:25,448 root WARNING warning: no files found matching 'rpy/situation.py' 2025-05-15 04:35:25,448 root WARNING warning: no files found matching '*.py' under directory 'rpy/robjects' 2025-05-15 04:35:25,448 root WARNING warning: no files found matching '*.py' under directory 'rpy/ipython' 2025-05-15 04:35:25,448 root WARNING warning: no files found matching '*.py' under directory 'rpy/interactive' 2025-05-15 04:35:25,448 root WARNING warning: no files found matching '*.py' under directory 'rpy/rlike' 2025-05-15 04:35:25,449 root WARNING no previously-included directories found matching 'dist' 2025-05-15 04:35:25,449 root WARNING warning: no files found matching 'doc/source/rpy2_logo.png' 2025-05-15 04:35:25,449 root INFO adding license file 'LICENSE' 2025-05-15 04:35:25,449 root INFO adding license file 'AUTHORS' 2025-05-15 04:35:25,452 root INFO writing manifest file 'rpy2.egg-info/SOURCES.txt' 2025-05-15 04:35:25,456 root INFO copying rpy2/rinterface_lib/R_API.h -> build/lib.linux-i686-cpython-312/rpy2/rinterface_lib 2025-05-15 04:35:25,456 root INFO copying rpy2/rinterface_lib/R_API_eventloop.h -> build/lib.linux-i686-cpython-312/rpy2/rinterface_lib 2025-05-15 04:35:25,456 root INFO copying rpy2/rinterface_lib/R_API_eventloop.c -> build/lib.linux-i686-cpython-312/rpy2/rinterface_lib 2025-05-15 04:35:25,457 root INFO copying rpy2/rinterface_lib/RPY2.h -> build/lib.linux-i686-cpython-312/rpy2/rinterface_lib 2025-05-15 04:35:25,457 root INFO copying rpy2/rinterface_lib/_bufferprotocol.c -> build/lib.linux-i686-cpython-312/rpy2/rinterface_lib 2025-05-15 04:35:25,458 root WARNING file _rinterface_cffi_abi.py (for module _rinterface_cffi_abi) not found 2025-05-15 04:35:25,460 root INFO generating cffi module 'build/lib.linux-i686-cpython-312/_rinterface_cffi_abi.py' 2025-05-15 04:35:25,474 root INFO running build_ext 2025-05-15 04:35:25,474 root INFO generating cffi module 'build/temp.linux-i686-cpython-312/_rinterface_cffi_api.c' 2025-05-15 04:35:25,474 root INFO creating build/temp.linux-i686-cpython-312 2025-05-15 04:35:25,499 root INFO building 'rpy2.rinterface_lib._bufferprotocol' extension 2025-05-15 04:35:25,499 root INFO creating build/temp.linux-i686-cpython-312/rpy2/rinterface_lib 2025-05-15 04:35:25,499 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.12 -c rpy2/rinterface_lib/_bufferprotocol.c -o build/temp.linux-i686-cpython-312/rpy2/rinterface_lib/_bufferprotocol.o 2025-05-15 04:35:25,649 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Wl,-z,pack-relative-relocs -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-i686-cpython-312/rpy2/rinterface_lib/_bufferprotocol.o -L/usr/lib -o build/lib.linux-i686-cpython-312/rpy2/rinterface_lib/_bufferprotocol.cpython-312-i386-linux-musl.so 2025-05-15 04:35:25,665 root INFO building '_rinterface_cffi_api' extension 2025-05-15 04:35:25,666 root INFO creating build/temp.linux-i686-cpython-312/build/temp.linux-i686-cpython-312 2025-05-15 04:35:25,666 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -DR_INTERFACE_PTRS=True -Irpy2/rinterface_lib/ -I/usr/include/python3.12 -c build/temp.linux-i686-cpython-312/_rinterface_cffi_api.c -o build/temp.linux-i686-cpython-312/build/temp.linux-i686-cpython-312/_rinterface_cffi_api.o -std=c99 2025-05-15 04:35:28,976 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Wl,-z,pack-relative-relocs -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-i686-cpython-312/build/temp.linux-i686-cpython-312/_rinterface_cffi_api.o -L/usr/lib/R/lib -L/usr/lib -lR -lpcre2-8 -ldeflate -lzstd -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n -lopenblas -o build/lib.linux-i686-cpython-312/_rinterface_cffi_api.abi3.so -Wl,--export-dynamic -fopenmp -Wl,--as-needed,-O1,--sort-common -Wl,-z,pack-relative-relocs -Wl,-rpath,/usr/lib/R/lib 2025-05-15 04:35:29,035 root INFO installing to build/bdist.linux-i686/wheel 2025-05-15 04:35:29,035 root INFO running install 2025-05-15 04:35:29,050 root INFO running install_lib 2025-05-15 04:35:29,055 root INFO creating build/bdist.linux-i686/wheel 2025-05-15 04:35:29,056 root INFO copying build/lib.linux-i686-cpython-312/_rinterface_cffi_api.abi3.so -> build/bdist.linux-i686/wheel/. 2025-05-15 04:35:29,056 root INFO copying build/lib.linux-i686-cpython-312/_rinterface_cffi_abi.py -> build/bdist.linux-i686/wheel/. 2025-05-15 04:35:29,057 root INFO creating build/bdist.linux-i686/wheel/rpy2 2025-05-15 04:35:29,057 root INFO copying build/lib.linux-i686-cpython-312/rpy2/_rinterface_cffi_build.py -> build/bdist.linux-i686/wheel/./rpy2 2025-05-15 04:35:29,057 root INFO copying build/lib.linux-i686-cpython-312/rpy2/situation.py -> build/bdist.linux-i686/wheel/./rpy2 2025-05-15 04:35:29,057 root INFO creating build/bdist.linux-i686/wheel/rpy2/ipython 2025-05-15 04:35:29,058 root INFO copying build/lib.linux-i686-cpython-312/rpy2/ipython/__init__.py -> build/bdist.linux-i686/wheel/./rpy2/ipython 2025-05-15 04:35:29,058 root INFO copying build/lib.linux-i686-cpython-312/rpy2/ipython/html.py -> build/bdist.linux-i686/wheel/./rpy2/ipython 2025-05-15 04:35:29,058 root INFO copying build/lib.linux-i686-cpython-312/rpy2/ipython/rmagic.py -> build/bdist.linux-i686/wheel/./rpy2/ipython 2025-05-15 04:35:29,058 root INFO copying build/lib.linux-i686-cpython-312/rpy2/ipython/ggplot.py -> build/bdist.linux-i686/wheel/./rpy2/ipython 2025-05-15 04:35:29,059 root INFO creating build/bdist.linux-i686/wheel/rpy2/rlike 2025-05-15 04:35:29,059 root INFO copying build/lib.linux-i686-cpython-312/rpy2/rlike/indexing.py -> build/bdist.linux-i686/wheel/./rpy2/rlike 2025-05-15 04:35:29,059 root INFO copying build/lib.linux-i686-cpython-312/rpy2/rlike/container.py -> build/bdist.linux-i686/wheel/./rpy2/rlike 2025-05-15 04:35:29,060 root INFO copying build/lib.linux-i686-cpython-312/rpy2/rlike/__init__.py -> build/bdist.linux-i686/wheel/./rpy2/rlike 2025-05-15 04:35:29,060 root INFO copying build/lib.linux-i686-cpython-312/rpy2/rlike/functional.py -> build/bdist.linux-i686/wheel/./rpy2/rlike 2025-05-15 04:35:29,060 root INFO copying build/lib.linux-i686-cpython-312/rpy2/__init__.py -> build/bdist.linux-i686/wheel/./rpy2 2025-05-15 04:35:29,060 root INFO copying build/lib.linux-i686-cpython-312/rpy2/rinterface.py -> build/bdist.linux-i686/wheel/./rpy2 2025-05-15 04:35:29,061 root INFO creating build/bdist.linux-i686/wheel/rpy2/interactive 2025-05-15 04:35:29,061 root INFO copying build/lib.linux-i686-cpython-312/rpy2/interactive/__init__.py -> build/bdist.linux-i686/wheel/./rpy2/interactive 2025-05-15 04:35:29,061 root INFO copying build/lib.linux-i686-cpython-312/rpy2/interactive/process_revents.py -> build/bdist.linux-i686/wheel/./rpy2/interactive 2025-05-15 04:35:29,061 root INFO copying build/lib.linux-i686-cpython-312/rpy2/interactive/packages.py -> build/bdist.linux-i686/wheel/./rpy2/interactive 2025-05-15 04:35:29,062 root INFO creating build/bdist.linux-i686/wheel/rpy2/tests 2025-05-15 04:35:29,062 root INFO creating build/bdist.linux-i686/wheel/rpy2/tests/ipython 2025-05-15 04:35:29,062 root INFO copying build/lib.linux-i686-cpython-312/rpy2/tests/ipython/test_rmagic.py -> build/bdist.linux-i686/wheel/./rpy2/tests/ipython 2025-05-15 04:35:29,063 root INFO copying build/lib.linux-i686-cpython-312/rpy2/tests/ipython/test_ggplot.py -> build/bdist.linux-i686/wheel/./rpy2/tests/ipython 2025-05-15 04:35:29,063 root INFO copying build/lib.linux-i686-cpython-312/rpy2/tests/ipython/__init__.py -> build/bdist.linux-i686/wheel/./rpy2/tests/ipython 2025-05-15 04:35:29,063 root INFO copying build/lib.linux-i686-cpython-312/rpy2/tests/ipython/test_html.py -> build/bdist.linux-i686/wheel/./rpy2/tests/ipython 2025-05-15 04:35:29,063 root INFO copying build/lib.linux-i686-cpython-312/rpy2/tests/utils.py -> build/bdist.linux-i686/wheel/./rpy2/tests 2025-05-15 04:35:29,064 root INFO creating build/bdist.linux-i686/wheel/rpy2/tests/rinterface 2025-05-15 04:35:29,064 root INFO copying build/lib.linux-i686-cpython-312/rpy2/tests/rinterface/test_noinitialization.py -> build/bdist.linux-i686/wheel/./rpy2/tests/rinterface 2025-05-15 04:35:29,064 root INFO copying build/lib.linux-i686-cpython-312/rpy2/tests/rinterface/test_openrlib.py -> build/bdist.linux-i686/wheel/./rpy2/tests/rinterface 2025-05-15 04:35:29,064 root INFO copying build/lib.linux-i686-cpython-312/rpy2/tests/rinterface/test_vector_lang.py -> build/bdist.linux-i686/wheel/./rpy2/tests/rinterface 2025-05-15 04:35:29,065 root INFO copying build/lib.linux-i686-cpython-312/rpy2/tests/rinterface/test_vector_numpy.py -> build/bdist.linux-i686/wheel/./rpy2/tests/rinterface 2025-05-15 04:35:29,065 root INFO copying build/lib.linux-i686-cpython-312/rpy2/tests/rinterface/test_endr.py -> build/bdist.linux-i686/wheel/./rpy2/tests/rinterface 2025-05-15 04:35:29,065 root INFO copying build/lib.linux-i686-cpython-312/rpy2/tests/rinterface/test_memorymanagement.py -> build/bdist.linux-i686/wheel/./rpy2/tests/rinterface 2025-05-15 04:35:29,065 root INFO copying build/lib.linux-i686-cpython-312/rpy2/tests/rinterface/test_symbol.py -> build/bdist.linux-i686/wheel/./rpy2/tests/rinterface 2025-05-15 04:35:29,066 root INFO copying build/lib.linux-i686-cpython-312/rpy2/tests/rinterface/test_na.py -> build/bdist.linux-i686/wheel/./rpy2/tests/rinterface 2025-05-15 04:35:29,066 root INFO copying build/lib.linux-i686-cpython-312/rpy2/tests/rinterface/test_threading.py -> build/bdist.linux-i686/wheel/./rpy2/tests/rinterface 2025-05-15 04:35:29,066 root INFO copying build/lib.linux-i686-cpython-312/rpy2/tests/rinterface/test_externalptr.py -> build/bdist.linux-i686/wheel/./rpy2/tests/rinterface 2025-05-15 04:35:29,066 root INFO copying build/lib.linux-i686-cpython-312/rpy2/tests/rinterface/test_vector_float.py -> build/bdist.linux-i686/wheel/./rpy2/tests/rinterface 2025-05-15 04:35:29,066 root INFO copying build/lib.linux-i686-cpython-312/rpy2/tests/rinterface/test_vector_list.py -> build/bdist.linux-i686/wheel/./rpy2/tests/rinterface 2025-05-15 04:35:29,067 root INFO copying build/lib.linux-i686-cpython-312/rpy2/tests/rinterface/test_vector_int.py -> build/bdist.linux-i686/wheel/./rpy2/tests/rinterface 2025-05-15 04:35:29,067 root INFO copying build/lib.linux-i686-cpython-312/rpy2/tests/rinterface/__init__.py -> build/bdist.linux-i686/wheel/./rpy2/tests/rinterface 2025-05-15 04:35:29,067 root INFO copying build/lib.linux-i686-cpython-312/rpy2/tests/rinterface/test_functions.py -> build/bdist.linux-i686/wheel/./rpy2/tests/rinterface 2025-05-15 04:35:29,067 root INFO copying build/lib.linux-i686-cpython-312/rpy2/tests/rinterface/test_embedded_r.py -> build/bdist.linux-i686/wheel/./rpy2/tests/rinterface 2025-05-15 04:35:29,068 root INFO copying build/lib.linux-i686-cpython-312/rpy2/tests/rinterface/test_sexp.py -> build/bdist.linux-i686/wheel/./rpy2/tests/rinterface 2025-05-15 04:35:29,068 root INFO copying build/lib.linux-i686-cpython-312/rpy2/tests/rinterface/test_vector_str.py -> build/bdist.linux-i686/wheel/./rpy2/tests/rinterface 2025-05-15 04:35:29,068 root INFO copying build/lib.linux-i686-cpython-312/rpy2/tests/rinterface/test_vector_bool.py -> build/bdist.linux-i686/wheel/./rpy2/tests/rinterface 2025-05-15 04:35:29,068 root INFO copying build/lib.linux-i686-cpython-312/rpy2/tests/rinterface/test_environment.py -> build/bdist.linux-i686/wheel/./rpy2/tests/rinterface 2025-05-15 04:35:29,069 root INFO copying build/lib.linux-i686-cpython-312/rpy2/tests/rinterface/test_bufferprotocol.py -> build/bdist.linux-i686/wheel/./rpy2/tests/rinterface 2025-05-15 04:35:29,069 root INFO copying build/lib.linux-i686-cpython-312/rpy2/tests/rinterface/test_vector_pairlist.py -> build/bdist.linux-i686/wheel/./rpy2/tests/rinterface 2025-05-15 04:35:29,069 root INFO copying build/lib.linux-i686-cpython-312/rpy2/tests/rinterface/test_callbacks.py -> build/bdist.linux-i686/wheel/./rpy2/tests/rinterface 2025-05-15 04:35:29,069 root INFO copying build/lib.linux-i686-cpython-312/rpy2/tests/rinterface/test_vectors.py -> build/bdist.linux-i686/wheel/./rpy2/tests/rinterface 2025-05-15 04:35:29,070 root INFO copying build/lib.linux-i686-cpython-312/rpy2/tests/rinterface/test_conversion.py -> build/bdist.linux-i686/wheel/./rpy2/tests/rinterface 2025-05-15 04:35:29,070 root INFO copying build/lib.linux-i686-cpython-312/rpy2/tests/rinterface/test_vector_byte.py -> build/bdist.linux-i686/wheel/./rpy2/tests/rinterface 2025-05-15 04:35:29,070 root INFO copying build/lib.linux-i686-cpython-312/rpy2/tests/rinterface/test_vector_complex.py -> build/bdist.linux-i686/wheel/./rpy2/tests/rinterface 2025-05-15 04:35:29,070 root INFO creating build/bdist.linux-i686/wheel/rpy2/tests/rlike 2025-05-15 04:35:29,071 root INFO copying build/lib.linux-i686-cpython-312/rpy2/tests/rlike/test_indexing.py -> build/bdist.linux-i686/wheel/./rpy2/tests/rlike 2025-05-15 04:35:29,071 root INFO copying build/lib.linux-i686-cpython-312/rpy2/tests/rlike/test_functional.py -> build/bdist.linux-i686/wheel/./rpy2/tests/rlike 2025-05-15 04:35:29,071 root INFO copying build/lib.linux-i686-cpython-312/rpy2/tests/rlike/test_container.py -> build/bdist.linux-i686/wheel/./rpy2/tests/rlike 2025-05-15 04:35:29,071 root INFO copying build/lib.linux-i686-cpython-312/rpy2/tests/__init__.py -> build/bdist.linux-i686/wheel/./rpy2/tests 2025-05-15 04:35:29,072 root INFO creating build/bdist.linux-i686/wheel/rpy2/tests/robjects 2025-05-15 04:35:29,072 root INFO copying build/lib.linux-i686-cpython-312/rpy2/tests/robjects/test_formula.py -> build/bdist.linux-i686/wheel/./rpy2/tests/robjects 2025-05-15 04:35:29,072 root INFO creating build/bdist.linux-i686/wheel/rpy2/tests/robjects/lib 2025-05-15 04:35:29,073 root INFO copying build/lib.linux-i686-cpython-312/rpy2/tests/robjects/lib/test_grdevices.py -> build/bdist.linux-i686/wheel/./rpy2/tests/robjects/lib 2025-05-15 04:35:29,073 root INFO copying build/lib.linux-i686-cpython-312/rpy2/tests/robjects/lib/test_tidyr.py -> build/bdist.linux-i686/wheel/./rpy2/tests/robjects/lib 2025-05-15 04:35:29,073 root INFO copying build/lib.linux-i686-cpython-312/rpy2/tests/robjects/lib/test_dbplyr.py -> build/bdist.linux-i686/wheel/./rpy2/tests/robjects/lib 2025-05-15 04:35:29,073 root INFO copying build/lib.linux-i686-cpython-312/rpy2/tests/robjects/lib/test_ggplot2.py -> build/bdist.linux-i686/wheel/./rpy2/tests/robjects/lib 2025-05-15 04:35:29,074 root INFO copying build/lib.linux-i686-cpython-312/rpy2/tests/robjects/lib/__init__.py -> build/bdist.linux-i686/wheel/./rpy2/tests/robjects/lib 2025-05-15 04:35:29,074 root INFO copying build/lib.linux-i686-cpython-312/rpy2/tests/robjects/lib/test_grid.py -> build/bdist.linux-i686/wheel/./rpy2/tests/robjects/lib 2025-05-15 04:35:29,074 root INFO copying build/lib.linux-i686-cpython-312/rpy2/tests/robjects/lib/test_dplyr.py -> build/bdist.linux-i686/wheel/./rpy2/tests/robjects/lib 2025-05-15 04:35:29,074 root INFO copying build/lib.linux-i686-cpython-312/rpy2/tests/robjects/test_translated_function.py -> build/bdist.linux-i686/wheel/./rpy2/tests/robjects 2025-05-15 04:35:29,074 root INFO copying build/lib.linux-i686-cpython-312/rpy2/tests/robjects/test_robjects.py -> build/bdist.linux-i686/wheel/./rpy2/tests/robjects 2025-05-15 04:35:29,075 root INFO copying build/lib.linux-i686-cpython-312/rpy2/tests/robjects/test_array.py -> build/bdist.linux-i686/wheel/./rpy2/tests/robjects 2025-05-15 04:35:29,075 root INFO copying build/lib.linux-i686-cpython-312/rpy2/tests/robjects/test_vector_extractdelegator.py -> build/bdist.linux-i686/wheel/./rpy2/tests/robjects 2025-05-15 04:35:29,075 root INFO copying build/lib.linux-i686-cpython-312/rpy2/tests/robjects/test_vector.py -> build/bdist.linux-i686/wheel/./rpy2/tests/robjects 2025-05-15 04:35:29,075 root INFO copying build/lib.linux-i686-cpython-312/rpy2/tests/robjects/__init__.py -> build/bdist.linux-i686/wheel/./rpy2/tests/robjects 2025-05-15 04:35:29,076 root INFO copying build/lib.linux-i686-cpython-312/rpy2/tests/robjects/test_conversion_numpy.py -> build/bdist.linux-i686/wheel/./rpy2/tests/robjects 2025-05-15 04:35:29,076 root INFO copying build/lib.linux-i686-cpython-312/rpy2/tests/robjects/test_help.py -> build/bdist.linux-i686/wheel/./rpy2/tests/robjects 2025-05-15 04:35:29,076 root INFO copying build/lib.linux-i686-cpython-312/rpy2/tests/robjects/test_environment.py -> build/bdist.linux-i686/wheel/./rpy2/tests/robjects 2025-05-15 04:35:29,076 root INFO copying build/lib.linux-i686-cpython-312/rpy2/tests/robjects/test_pandas_conversions.py -> build/bdist.linux-i686/wheel/./rpy2/tests/robjects 2025-05-15 04:35:29,077 root INFO copying build/lib.linux-i686-cpython-312/rpy2/tests/robjects/test_packages.py -> build/bdist.linux-i686/wheel/./rpy2/tests/robjects 2025-05-15 04:35:29,077 root INFO copying build/lib.linux-i686-cpython-312/rpy2/tests/robjects/test_serialization.py -> build/bdist.linux-i686/wheel/./rpy2/tests/robjects 2025-05-15 04:35:29,077 root INFO copying build/lib.linux-i686-cpython-312/rpy2/tests/robjects/test_packages_utils.py -> build/bdist.linux-i686/wheel/./rpy2/tests/robjects 2025-05-15 04:35:29,077 root INFO copying build/lib.linux-i686-cpython-312/rpy2/tests/robjects/test_methods.py -> build/bdist.linux-i686/wheel/./rpy2/tests/robjects 2025-05-15 04:35:29,078 root INFO copying build/lib.linux-i686-cpython-312/rpy2/tests/robjects/test_vector_factor.py -> build/bdist.linux-i686/wheel/./rpy2/tests/robjects 2025-05-15 04:35:29,078 root INFO copying build/lib.linux-i686-cpython-312/rpy2/tests/robjects/test_language.py -> build/bdist.linux-i686/wheel/./rpy2/tests/robjects 2025-05-15 04:35:29,078 root INFO copying build/lib.linux-i686-cpython-312/rpy2/tests/robjects/test_function.py -> build/bdist.linux-i686/wheel/./rpy2/tests/robjects 2025-05-15 04:35:29,078 root INFO copying build/lib.linux-i686-cpython-312/rpy2/tests/robjects/test_rs4.py -> build/bdist.linux-i686/wheel/./rpy2/tests/robjects 2025-05-15 04:35:29,078 root INFO copying build/lib.linux-i686-cpython-312/rpy2/tests/robjects/test_vector_datetime.py -> build/bdist.linux-i686/wheel/./rpy2/tests/robjects 2025-05-15 04:35:29,079 root INFO copying build/lib.linux-i686-cpython-312/rpy2/tests/robjects/test_dataframe.py -> build/bdist.linux-i686/wheel/./rpy2/tests/robjects 2025-05-15 04:35:29,079 root INFO copying build/lib.linux-i686-cpython-312/rpy2/tests/robjects/test_conversion.py -> build/bdist.linux-i686/wheel/./rpy2/tests/robjects 2025-05-15 04:35:29,079 root INFO creating build/bdist.linux-i686/wheel/rpy2/rinterface_lib 2025-05-15 04:35:29,080 root INFO copying build/lib.linux-i686-cpython-312/rpy2/rinterface_lib/R_API.h -> build/bdist.linux-i686/wheel/./rpy2/rinterface_lib 2025-05-15 04:35:29,080 root INFO copying build/lib.linux-i686-cpython-312/rpy2/rinterface_lib/_bufferprotocol.cpython-312-i386-linux-musl.so -> build/bdist.linux-i686/wheel/./rpy2/rinterface_lib 2025-05-15 04:35:29,080 root INFO copying build/lib.linux-i686-cpython-312/rpy2/rinterface_lib/bufferprotocol.py -> build/bdist.linux-i686/wheel/./rpy2/rinterface_lib 2025-05-15 04:35:29,080 root INFO copying build/lib.linux-i686-cpython-312/rpy2/rinterface_lib/ffi_proxy.py -> build/bdist.linux-i686/wheel/./rpy2/rinterface_lib 2025-05-15 04:35:29,081 root INFO copying build/lib.linux-i686-cpython-312/rpy2/rinterface_lib/__init__.py -> build/bdist.linux-i686/wheel/./rpy2/rinterface_lib 2025-05-15 04:35:29,081 root INFO copying build/lib.linux-i686-cpython-312/rpy2/rinterface_lib/sexp.py -> build/bdist.linux-i686/wheel/./rpy2/rinterface_lib 2025-05-15 04:35:29,081 root INFO copying build/lib.linux-i686-cpython-312/rpy2/rinterface_lib/_bufferprotocol.c -> build/bdist.linux-i686/wheel/./rpy2/rinterface_lib 2025-05-15 04:35:29,081 root INFO copying build/lib.linux-i686-cpython-312/rpy2/rinterface_lib/na_values.py -> build/bdist.linux-i686/wheel/./rpy2/rinterface_lib 2025-05-15 04:35:29,081 root INFO copying build/lib.linux-i686-cpython-312/rpy2/rinterface_lib/R_API_eventloop.c -> build/bdist.linux-i686/wheel/./rpy2/rinterface_lib 2025-05-15 04:35:29,082 root INFO copying build/lib.linux-i686-cpython-312/rpy2/rinterface_lib/embedded_mswin.py -> build/bdist.linux-i686/wheel/./rpy2/rinterface_lib 2025-05-15 04:35:29,082 root INFO copying build/lib.linux-i686-cpython-312/rpy2/rinterface_lib/R_API_eventloop.h -> build/bdist.linux-i686/wheel/./rpy2/rinterface_lib 2025-05-15 04:35:29,082 root INFO copying build/lib.linux-i686-cpython-312/rpy2/rinterface_lib/_rinterface_capi.py -> build/bdist.linux-i686/wheel/./rpy2/rinterface_lib 2025-05-15 04:35:29,082 root INFO copying build/lib.linux-i686-cpython-312/rpy2/rinterface_lib/embedded.py -> build/bdist.linux-i686/wheel/./rpy2/rinterface_lib 2025-05-15 04:35:29,083 root INFO copying build/lib.linux-i686-cpython-312/rpy2/rinterface_lib/memorymanagement.py -> build/bdist.linux-i686/wheel/./rpy2/rinterface_lib 2025-05-15 04:35:29,083 root INFO copying build/lib.linux-i686-cpython-312/rpy2/rinterface_lib/conversion.py -> build/bdist.linux-i686/wheel/./rpy2/rinterface_lib 2025-05-15 04:35:29,083 root INFO copying build/lib.linux-i686-cpython-312/rpy2/rinterface_lib/callbacks.py -> build/bdist.linux-i686/wheel/./rpy2/rinterface_lib 2025-05-15 04:35:29,083 root INFO copying build/lib.linux-i686-cpython-312/rpy2/rinterface_lib/openrlib.py -> build/bdist.linux-i686/wheel/./rpy2/rinterface_lib 2025-05-15 04:35:29,084 root INFO copying build/lib.linux-i686-cpython-312/rpy2/rinterface_lib/RPY2.h -> build/bdist.linux-i686/wheel/./rpy2/rinterface_lib 2025-05-15 04:35:29,084 root INFO creating build/bdist.linux-i686/wheel/rpy2/robjects 2025-05-15 04:35:29,084 root INFO copying build/lib.linux-i686-cpython-312/rpy2/robjects/environments.py -> build/bdist.linux-i686/wheel/./rpy2/robjects 2025-05-15 04:35:29,084 root INFO creating build/bdist.linux-i686/wheel/rpy2/robjects/lib 2025-05-15 04:35:29,085 root INFO copying build/lib.linux-i686-cpython-312/rpy2/robjects/lib/grid.py -> build/bdist.linux-i686/wheel/./rpy2/robjects/lib 2025-05-15 04:35:29,085 root INFO copying build/lib.linux-i686-cpython-312/rpy2/robjects/lib/dbplyr.py -> build/bdist.linux-i686/wheel/./rpy2/robjects/lib 2025-05-15 04:35:29,085 root INFO copying build/lib.linux-i686-cpython-312/rpy2/robjects/lib/__init__.py -> build/bdist.linux-i686/wheel/./rpy2/robjects/lib 2025-05-15 04:35:29,085 root INFO copying build/lib.linux-i686-cpython-312/rpy2/robjects/lib/grdevices.py -> build/bdist.linux-i686/wheel/./rpy2/robjects/lib 2025-05-15 04:35:29,085 root INFO copying build/lib.linux-i686-cpython-312/rpy2/robjects/lib/tidyr.py -> build/bdist.linux-i686/wheel/./rpy2/robjects/lib 2025-05-15 04:35:29,086 root INFO copying build/lib.linux-i686-cpython-312/rpy2/robjects/lib/dplyr.py -> build/bdist.linux-i686/wheel/./rpy2/robjects/lib 2025-05-15 04:35:29,086 root INFO copying build/lib.linux-i686-cpython-312/rpy2/robjects/lib/ggplot2.py -> build/bdist.linux-i686/wheel/./rpy2/robjects/lib 2025-05-15 04:35:29,086 root INFO copying build/lib.linux-i686-cpython-312/rpy2/robjects/numpy2ri.py -> build/bdist.linux-i686/wheel/./rpy2/robjects 2025-05-15 04:35:29,087 root INFO copying build/lib.linux-i686-cpython-312/rpy2/robjects/language.py -> build/bdist.linux-i686/wheel/./rpy2/robjects 2025-05-15 04:35:29,087 root INFO copying build/lib.linux-i686-cpython-312/rpy2/robjects/constants.py -> build/bdist.linux-i686/wheel/./rpy2/robjects 2025-05-15 04:35:29,087 root INFO copying build/lib.linux-i686-cpython-312/rpy2/robjects/robject.py -> build/bdist.linux-i686/wheel/./rpy2/robjects 2025-05-15 04:35:29,087 root INFO copying build/lib.linux-i686-cpython-312/rpy2/robjects/__init__.py -> build/bdist.linux-i686/wheel/./rpy2/robjects 2025-05-15 04:35:29,087 root INFO copying build/lib.linux-i686-cpython-312/rpy2/robjects/help.py -> build/bdist.linux-i686/wheel/./rpy2/robjects 2025-05-15 04:35:29,088 root INFO copying build/lib.linux-i686-cpython-312/rpy2/robjects/pandas2ri.py -> build/bdist.linux-i686/wheel/./rpy2/robjects 2025-05-15 04:35:29,088 root INFO copying build/lib.linux-i686-cpython-312/rpy2/robjects/vectors.py -> build/bdist.linux-i686/wheel/./rpy2/robjects 2025-05-15 04:35:29,088 root INFO copying build/lib.linux-i686-cpython-312/rpy2/robjects/packages_utils.py -> build/bdist.linux-i686/wheel/./rpy2/robjects 2025-05-15 04:35:29,088 root INFO copying build/lib.linux-i686-cpython-312/rpy2/robjects/conversion.py -> build/bdist.linux-i686/wheel/./rpy2/robjects 2025-05-15 04:35:29,089 root INFO copying build/lib.linux-i686-cpython-312/rpy2/robjects/functions.py -> build/bdist.linux-i686/wheel/./rpy2/robjects 2025-05-15 04:35:29,089 root INFO copying build/lib.linux-i686-cpython-312/rpy2/robjects/methods.py -> build/bdist.linux-i686/wheel/./rpy2/robjects 2025-05-15 04:35:29,089 root INFO copying build/lib.linux-i686-cpython-312/rpy2/robjects/packages.py -> build/bdist.linux-i686/wheel/./rpy2/robjects 2025-05-15 04:35:29,089 root INFO running install_egg_info 2025-05-15 04:35:29,094 root INFO Copying rpy2.egg-info to build/bdist.linux-i686/wheel/./rpy2-3.5.17-py3.12.egg-info 2025-05-15 04:35:29,095 root INFO running install_scripts 2025-05-15 04:35:29,102 root INFO creating build/bdist.linux-i686/wheel/rpy2-3.5.17.dist-info/WHEEL 2025-05-15 04:35:29,103 wheel INFO creating '/home/buildozer/aports/community/py3-rpy2/src/rpy2-3.5.17/.dist/.tmp-yht15nkn/rpy2-3.5.17-cp312-cp312-linux_i686.whl' and adding 'build/bdist.linux-i686/wheel' to it 2025-05-15 04:35:29,103 wheel INFO adding '_rinterface_cffi_abi.py' 2025-05-15 04:35:29,104 wheel INFO adding '_rinterface_cffi_api.abi3.so' 2025-05-15 04:35:29,105 wheel INFO adding 'rpy2/__init__.py' 2025-05-15 04:35:29,105 wheel INFO adding 'rpy2/_rinterface_cffi_build.py' 2025-05-15 04:35:29,106 wheel INFO adding 'rpy2/rinterface.py' 2025-05-15 04:35:29,106 wheel INFO adding 'rpy2/situation.py' 2025-05-15 04:35:29,106 wheel INFO adding 'rpy2/interactive/__init__.py' 2025-05-15 04:35:29,107 wheel INFO adding 'rpy2/interactive/packages.py' 2025-05-15 04:35:29,107 wheel INFO adding 'rpy2/interactive/process_revents.py' 2025-05-15 04:35:29,107 wheel INFO adding 'rpy2/ipython/__init__.py' 2025-05-15 04:35:29,107 wheel INFO adding 'rpy2/ipython/ggplot.py' 2025-05-15 04:35:29,108 wheel INFO adding 'rpy2/ipython/html.py' 2025-05-15 04:35:29,108 wheel INFO adding 'rpy2/ipython/rmagic.py' 2025-05-15 04:35:29,109 wheel INFO adding 'rpy2/rinterface_lib/RPY2.h' 2025-05-15 04:35:29,109 wheel INFO adding 'rpy2/rinterface_lib/R_API.h' 2025-05-15 04:35:29,109 wheel INFO adding 'rpy2/rinterface_lib/R_API_eventloop.c' 2025-05-15 04:35:29,109 wheel INFO adding 'rpy2/rinterface_lib/R_API_eventloop.h' 2025-05-15 04:35:29,110 wheel INFO adding 'rpy2/rinterface_lib/__init__.py' 2025-05-15 04:35:29,110 wheel INFO adding 'rpy2/rinterface_lib/_bufferprotocol.c' 2025-05-15 04:35:29,110 wheel INFO adding 'rpy2/rinterface_lib/_bufferprotocol.cpython-312-i386-linux-musl.so' 2025-05-15 04:35:29,110 wheel INFO adding 'rpy2/rinterface_lib/_rinterface_capi.py' 2025-05-15 04:35:29,111 wheel INFO adding 'rpy2/rinterface_lib/bufferprotocol.py' 2025-05-15 04:35:29,111 wheel INFO adding 'rpy2/rinterface_lib/callbacks.py' 2025-05-15 04:35:29,111 wheel INFO adding 'rpy2/rinterface_lib/conversion.py' 2025-05-15 04:35:29,112 wheel INFO adding 'rpy2/rinterface_lib/embedded.py' 2025-05-15 04:35:29,112 wheel INFO adding 'rpy2/rinterface_lib/embedded_mswin.py' 2025-05-15 04:35:29,112 wheel INFO adding 'rpy2/rinterface_lib/ffi_proxy.py' 2025-05-15 04:35:29,112 wheel INFO adding 'rpy2/rinterface_lib/memorymanagement.py' 2025-05-15 04:35:29,113 wheel INFO adding 'rpy2/rinterface_lib/na_values.py' 2025-05-15 04:35:29,113 wheel INFO adding 'rpy2/rinterface_lib/openrlib.py' 2025-05-15 04:35:29,113 wheel INFO adding 'rpy2/rinterface_lib/sexp.py' 2025-05-15 04:35:29,114 wheel INFO adding 'rpy2/rlike/__init__.py' 2025-05-15 04:35:29,114 wheel INFO adding 'rpy2/rlike/container.py' 2025-05-15 04:35:29,114 wheel INFO adding 'rpy2/rlike/functional.py' 2025-05-15 04:35:29,115 wheel INFO adding 'rpy2/rlike/indexing.py' 2025-05-15 04:35:29,115 wheel INFO adding 'rpy2/robjects/__init__.py' 2025-05-15 04:35:29,115 wheel INFO adding 'rpy2/robjects/constants.py' 2025-05-15 04:35:29,115 wheel INFO adding 'rpy2/robjects/conversion.py' 2025-05-15 04:35:29,116 wheel INFO adding 'rpy2/robjects/environments.py' 2025-05-15 04:35:29,116 wheel INFO adding 'rpy2/robjects/functions.py' 2025-05-15 04:35:29,116 wheel INFO adding 'rpy2/robjects/help.py' 2025-05-15 04:35:29,117 wheel INFO adding 'rpy2/robjects/language.py' 2025-05-15 04:35:29,117 wheel INFO adding 'rpy2/robjects/methods.py' 2025-05-15 04:35:29,117 wheel INFO adding 'rpy2/robjects/numpy2ri.py' 2025-05-15 04:35:29,118 wheel INFO adding 'rpy2/robjects/packages.py' 2025-05-15 04:35:29,118 wheel INFO adding 'rpy2/robjects/packages_utils.py' 2025-05-15 04:35:29,118 wheel INFO adding 'rpy2/robjects/pandas2ri.py' 2025-05-15 04:35:29,119 wheel INFO adding 'rpy2/robjects/robject.py' 2025-05-15 04:35:29,119 wheel INFO adding 'rpy2/robjects/vectors.py' 2025-05-15 04:35:29,119 wheel INFO adding 'rpy2/robjects/lib/__init__.py' 2025-05-15 04:35:29,120 wheel INFO adding 'rpy2/robjects/lib/dbplyr.py' 2025-05-15 04:35:29,120 wheel INFO adding 'rpy2/robjects/lib/dplyr.py' 2025-05-15 04:35:29,120 wheel INFO adding 'rpy2/robjects/lib/ggplot2.py' 2025-05-15 04:35:29,121 wheel INFO adding 'rpy2/robjects/lib/grdevices.py' 2025-05-15 04:35:29,121 wheel INFO adding 'rpy2/robjects/lib/grid.py' 2025-05-15 04:35:29,121 wheel INFO adding 'rpy2/robjects/lib/tidyr.py' 2025-05-15 04:35:29,122 wheel INFO adding 'rpy2/tests/__init__.py' 2025-05-15 04:35:29,122 wheel INFO adding 'rpy2/tests/utils.py' 2025-05-15 04:35:29,122 wheel INFO adding 'rpy2/tests/ipython/__init__.py' 2025-05-15 04:35:29,122 wheel INFO adding 'rpy2/tests/ipython/test_ggplot.py' 2025-05-15 04:35:29,123 wheel INFO adding 'rpy2/tests/ipython/test_html.py' 2025-05-15 04:35:29,123 wheel INFO adding 'rpy2/tests/ipython/test_rmagic.py' 2025-05-15 04:35:29,123 wheel INFO adding 'rpy2/tests/rinterface/__init__.py' 2025-05-15 04:35:29,123 wheel INFO adding 'rpy2/tests/rinterface/test_bufferprotocol.py' 2025-05-15 04:35:29,124 wheel INFO adding 'rpy2/tests/rinterface/test_callbacks.py' 2025-05-15 04:35:29,124 wheel INFO adding 'rpy2/tests/rinterface/test_conversion.py' 2025-05-15 04:35:29,124 wheel INFO adding 'rpy2/tests/rinterface/test_embedded_r.py' 2025-05-15 04:35:29,125 wheel INFO adding 'rpy2/tests/rinterface/test_endr.py' 2025-05-15 04:35:29,125 wheel INFO adding 'rpy2/tests/rinterface/test_environment.py' 2025-05-15 04:35:29,125 wheel INFO adding 'rpy2/tests/rinterface/test_externalptr.py' 2025-05-15 04:35:29,125 wheel INFO adding 'rpy2/tests/rinterface/test_functions.py' 2025-05-15 04:35:29,126 wheel INFO adding 'rpy2/tests/rinterface/test_memorymanagement.py' 2025-05-15 04:35:29,126 wheel INFO adding 'rpy2/tests/rinterface/test_na.py' 2025-05-15 04:35:29,126 wheel INFO adding 'rpy2/tests/rinterface/test_noinitialization.py' 2025-05-15 04:35:29,126 wheel INFO adding 'rpy2/tests/rinterface/test_openrlib.py' 2025-05-15 04:35:29,127 wheel INFO adding 'rpy2/tests/rinterface/test_sexp.py' 2025-05-15 04:35:29,127 wheel INFO adding 'rpy2/tests/rinterface/test_symbol.py' 2025-05-15 04:35:29,127 wheel INFO adding 'rpy2/tests/rinterface/test_threading.py' 2025-05-15 04:35:29,127 wheel INFO adding 'rpy2/tests/rinterface/test_vector_bool.py' 2025-05-15 04:35:29,128 wheel INFO adding 'rpy2/tests/rinterface/test_vector_byte.py' 2025-05-15 04:35:29,128 wheel INFO adding 'rpy2/tests/rinterface/test_vector_complex.py' 2025-05-15 04:35:29,128 wheel INFO adding 'rpy2/tests/rinterface/test_vector_float.py' 2025-05-15 04:35:29,128 wheel INFO adding 'rpy2/tests/rinterface/test_vector_int.py' 2025-05-15 04:35:29,129 wheel INFO adding 'rpy2/tests/rinterface/test_vector_lang.py' 2025-05-15 04:35:29,129 wheel INFO adding 'rpy2/tests/rinterface/test_vector_list.py' 2025-05-15 04:35:29,129 wheel INFO adding 'rpy2/tests/rinterface/test_vector_numpy.py' 2025-05-15 04:35:29,129 wheel INFO adding 'rpy2/tests/rinterface/test_vector_pairlist.py' 2025-05-15 04:35:29,129 wheel INFO adding 'rpy2/tests/rinterface/test_vector_str.py' 2025-05-15 04:35:29,130 wheel INFO adding 'rpy2/tests/rinterface/test_vectors.py' 2025-05-15 04:35:29,130 wheel INFO adding 'rpy2/tests/rlike/test_container.py' 2025-05-15 04:35:29,130 wheel INFO adding 'rpy2/tests/rlike/test_functional.py' 2025-05-15 04:35:29,131 wheel INFO adding 'rpy2/tests/rlike/test_indexing.py' 2025-05-15 04:35:29,131 wheel INFO adding 'rpy2/tests/robjects/__init__.py' 2025-05-15 04:35:29,131 wheel INFO adding 'rpy2/tests/robjects/test_array.py' 2025-05-15 04:35:29,131 wheel INFO adding 'rpy2/tests/robjects/test_conversion.py' 2025-05-15 04:35:29,132 wheel INFO adding 'rpy2/tests/robjects/test_conversion_numpy.py' 2025-05-15 04:35:29,132 wheel INFO adding 'rpy2/tests/robjects/test_dataframe.py' 2025-05-15 04:35:29,132 wheel INFO adding 'rpy2/tests/robjects/test_environment.py' 2025-05-15 04:35:29,132 wheel INFO adding 'rpy2/tests/robjects/test_formula.py' 2025-05-15 04:35:29,133 wheel INFO adding 'rpy2/tests/robjects/test_function.py' 2025-05-15 04:35:29,133 wheel INFO adding 'rpy2/tests/robjects/test_help.py' 2025-05-15 04:35:29,133 wheel INFO adding 'rpy2/tests/robjects/test_language.py' 2025-05-15 04:35:29,133 wheel INFO adding 'rpy2/tests/robjects/test_methods.py' 2025-05-15 04:35:29,134 wheel INFO adding 'rpy2/tests/robjects/test_packages.py' 2025-05-15 04:35:29,134 wheel INFO adding 'rpy2/tests/robjects/test_packages_utils.py' 2025-05-15 04:35:29,134 wheel INFO adding 'rpy2/tests/robjects/test_pandas_conversions.py' 2025-05-15 04:35:29,135 wheel INFO adding 'rpy2/tests/robjects/test_robjects.py' 2025-05-15 04:35:29,135 wheel INFO adding 'rpy2/tests/robjects/test_rs4.py' 2025-05-15 04:35:29,135 wheel INFO adding 'rpy2/tests/robjects/test_serialization.py' 2025-05-15 04:35:29,135 wheel INFO adding 'rpy2/tests/robjects/test_translated_function.py' 2025-05-15 04:35:29,136 wheel INFO adding 'rpy2/tests/robjects/test_vector.py' 2025-05-15 04:35:29,136 wheel INFO adding 'rpy2/tests/robjects/test_vector_datetime.py' 2025-05-15 04:35:29,136 wheel INFO adding 'rpy2/tests/robjects/test_vector_extractdelegator.py' 2025-05-15 04:35:29,136 wheel INFO adding 'rpy2/tests/robjects/test_vector_factor.py' 2025-05-15 04:35:29,137 wheel INFO adding 'rpy2/tests/robjects/lib/__init__.py' 2025-05-15 04:35:29,137 wheel INFO adding 'rpy2/tests/robjects/lib/test_dbplyr.py' 2025-05-15 04:35:29,137 wheel INFO adding 'rpy2/tests/robjects/lib/test_dplyr.py' 2025-05-15 04:35:29,137 wheel INFO adding 'rpy2/tests/robjects/lib/test_ggplot2.py' 2025-05-15 04:35:29,138 wheel INFO adding 'rpy2/tests/robjects/lib/test_grdevices.py' 2025-05-15 04:35:29,138 wheel INFO adding 'rpy2/tests/robjects/lib/test_grid.py' 2025-05-15 04:35:29,138 wheel INFO adding 'rpy2/tests/robjects/lib/test_tidyr.py' 2025-05-15 04:35:29,139 wheel INFO adding 'rpy2-3.5.17.dist-info/licenses/AUTHORS' 2025-05-15 04:35:29,139 wheel INFO adding 'rpy2-3.5.17.dist-info/licenses/LICENSE' 2025-05-15 04:35:29,139 wheel INFO adding 'rpy2-3.5.17.dist-info/METADATA' 2025-05-15 04:35:29,139 wheel INFO adding 'rpy2-3.5.17.dist-info/WHEEL' 2025-05-15 04:35:29,140 wheel INFO adding 'rpy2-3.5.17.dist-info/top_level.txt' 2025-05-15 04:35:29,140 wheel INFO adding 'rpy2-3.5.17.dist-info/RECORD' 2025-05-15 04:35:29,141 root INFO removing build/bdist.linux-i686/wheel 2025-05-15 04:35:29,145 gpep517 INFO The backend produced .dist/rpy2-3.5.17-cp312-cp312-linux_i686.whl rpy2-3.5.17-cp312-cp312-linux_i686.whl cffi mode: CFFI_MODE.ANY --- CFFI_MODE.ANY ABI mode interface built. API mode interface built. To change the API/ABI build mode, set or modify the environment variable RPY2_CFFI_MODE. ============================= test session starts ============================== platform linux -- Python 3.12.10, pytest-8.3.5, pluggy-1.5.0 -- /home/buildozer/aports/community/py3-rpy2/src/rpy2-3.5.17/.testenv/bin/python3 cachedir: .pytest_cache rootdir: /home/buildozer/aports/community/py3-rpy2/src/rpy2-3.5.17 configfile: pyproject.toml testpaths: rpy2/tests collecting ... collected 363 items / 30 errors / 1 deselected / 362 selected ==================================== ERRORS ==================================== ______________ ERROR collecting rpy2/tests/ipython/test_ggplot.py ______________ rpy2/tests/ipython/test_ggplot.py:2: in from rpy2.robjects.packages import PackageNotInstalledError rpy2/robjects/__init__.py:21: in from rpy2.robjects.robject import RObjectMixin, RObject rpy2/robjects/robject.py:81: in class RObjectMixin(abc.ABC): rpy2/robjects/robject.py:93: in RObjectMixin __show = _get_exported_value('methods', 'show') rpy2/rinterface_lib/conversion.py:45: in _ cdata = function(*args, **kwargs) rpy2/rinterface.py:890: in __call__ raise embedded.RRuntimeError(_rinterface._geterrmessage()) E rpy2.rinterface_lib.embedded.RRuntimeError: Error in dyn.load(file, DLLpath = DLLpath, ...) : E unable to load shared object '/usr/lib/R/library/methods/libs/methods.so': E Error loading shared library libR.so: No such file or directory (needed by /usr/lib/R/library/methods/libs/methods.so) ------------------------------- Captured stderr -------------------------------- During startup - Warning messages: 1: package "methods" in options("defaultPackages") was not found 2: package ‘utils’ in options("defaultPackages") was not found 3: package ‘grDevices’ in options("defaultPackages") was not found 4: package ‘graphics’ in options("defaultPackages") was not found 5: package ‘stats’ in options("defaultPackages") was not found 6: package ‘methods’ in options("defaultPackages") was not found _______________ ERROR collecting rpy2/tests/ipython/test_html.py _______________ rpy2/tests/ipython/test_html.py:4: in from rpy2.robjects import vectors rpy2/robjects/__init__.py:21: in from rpy2.robjects.robject import RObjectMixin, RObject rpy2/robjects/robject.py:81: in class RObjectMixin(abc.ABC): rpy2/robjects/robject.py:93: in RObjectMixin __show = _get_exported_value('methods', 'show') rpy2/rinterface_lib/conversion.py:45: in _ cdata = function(*args, **kwargs) rpy2/rinterface.py:890: in __call__ raise embedded.RRuntimeError(_rinterface._geterrmessage()) E rpy2.rinterface_lib.embedded.RRuntimeError: Error in dyn.load(file, DLLpath = DLLpath, ...) : E unable to load shared object '/usr/lib/R/library/methods/libs/methods.so': E Error loading shared library libR.so: No such file or directory (needed by /usr/lib/R/library/methods/libs/methods.so) ______________ ERROR collecting rpy2/tests/ipython/test_rmagic.py ______________ rpy2/tests/ipython/test_rmagic.py:8: in import rpy2.robjects rpy2/robjects/__init__.py:21: in from rpy2.robjects.robject import RObjectMixin, RObject rpy2/robjects/robject.py:81: in class RObjectMixin(abc.ABC): rpy2/robjects/robject.py:93: in RObjectMixin __show = _get_exported_value('methods', 'show') rpy2/rinterface_lib/conversion.py:45: in _ cdata = function(*args, **kwargs) rpy2/rinterface.py:890: in __call__ raise embedded.RRuntimeError(_rinterface._geterrmessage()) E rpy2.rinterface_lib.embedded.RRuntimeError: Error in dyn.load(file, DLLpath = DLLpath, ...) : E unable to load shared object '/usr/lib/R/library/methods/libs/methods.so': E Error loading shared library libR.so: No such file or directory (needed by /usr/lib/R/library/methods/libs/methods.so) ___________ ERROR collecting rpy2/tests/robjects/lib/test_dbplyr.py ____________ rpy2/tests/robjects/lib/test_dbplyr.py:2: in from rpy2.robjects import packages rpy2/robjects/__init__.py:21: in from rpy2.robjects.robject import RObjectMixin, RObject rpy2/robjects/robject.py:81: in class RObjectMixin(abc.ABC): rpy2/robjects/robject.py:93: in RObjectMixin __show = _get_exported_value('methods', 'show') rpy2/rinterface_lib/conversion.py:45: in _ cdata = function(*args, **kwargs) rpy2/rinterface.py:890: in __call__ raise embedded.RRuntimeError(_rinterface._geterrmessage()) E rpy2.rinterface_lib.embedded.RRuntimeError: Error in dyn.load(file, DLLpath = DLLpath, ...) : E unable to load shared object '/usr/lib/R/library/methods/libs/methods.so': E Error loading shared library libR.so: No such file or directory (needed by /usr/lib/R/library/methods/libs/methods.so) ____________ ERROR collecting rpy2/tests/robjects/lib/test_dplyr.py ____________ rpy2/tests/robjects/lib/test_dplyr.py:2: in from rpy2.robjects import packages rpy2/robjects/__init__.py:21: in from rpy2.robjects.robject import RObjectMixin, RObject rpy2/robjects/robject.py:81: in class RObjectMixin(abc.ABC): rpy2/robjects/robject.py:93: in RObjectMixin __show = _get_exported_value('methods', 'show') rpy2/rinterface_lib/conversion.py:45: in _ cdata = function(*args, **kwargs) rpy2/rinterface.py:890: in __call__ raise embedded.RRuntimeError(_rinterface._geterrmessage()) E rpy2.rinterface_lib.embedded.RRuntimeError: Error in dyn.load(file, DLLpath = DLLpath, ...) : E unable to load shared object '/usr/lib/R/library/methods/libs/methods.so': E Error loading shared library libR.so: No such file or directory (needed by /usr/lib/R/library/methods/libs/methods.so) ___________ ERROR collecting rpy2/tests/robjects/lib/test_ggplot2.py ___________ rpy2/tests/robjects/lib/test_ggplot2.py:3: in from rpy2.robjects import packages rpy2/robjects/__init__.py:21: in from rpy2.robjects.robject import RObjectMixin, RObject rpy2/robjects/robject.py:81: in class RObjectMixin(abc.ABC): rpy2/robjects/robject.py:93: in RObjectMixin __show = _get_exported_value('methods', 'show') rpy2/rinterface_lib/conversion.py:45: in _ cdata = function(*args, **kwargs) rpy2/rinterface.py:890: in __call__ raise embedded.RRuntimeError(_rinterface._geterrmessage()) E rpy2.rinterface_lib.embedded.RRuntimeError: Error in dyn.load(file, DLLpath = DLLpath, ...) : E unable to load shared object '/usr/lib/R/library/methods/libs/methods.so': E Error loading shared library libR.so: No such file or directory (needed by /usr/lib/R/library/methods/libs/methods.so) __________ ERROR collecting rpy2/tests/robjects/lib/test_grdevices.py __________ rpy2/tests/robjects/lib/test_grdevices.py:6: in from rpy2.robjects.packages import importr, data rpy2/robjects/__init__.py:21: in from rpy2.robjects.robject import RObjectMixin, RObject rpy2/robjects/robject.py:81: in class RObjectMixin(abc.ABC): rpy2/robjects/robject.py:93: in RObjectMixin __show = _get_exported_value('methods', 'show') rpy2/rinterface_lib/conversion.py:45: in _ cdata = function(*args, **kwargs) rpy2/rinterface.py:890: in __call__ raise embedded.RRuntimeError(_rinterface._geterrmessage()) E rpy2.rinterface_lib.embedded.RRuntimeError: Error in dyn.load(file, DLLpath = DLLpath, ...) : E unable to load shared object '/usr/lib/R/library/methods/libs/methods.so': E Error loading shared library libR.so: No such file or directory (needed by /usr/lib/R/library/methods/libs/methods.so) ____________ ERROR collecting rpy2/tests/robjects/lib/test_grid.py _____________ rpy2/tests/robjects/lib/test_grid.py:7: in import rpy2.robjects as robjects rpy2/robjects/__init__.py:21: in from rpy2.robjects.robject import RObjectMixin, RObject rpy2/robjects/robject.py:81: in class RObjectMixin(abc.ABC): rpy2/robjects/robject.py:93: in RObjectMixin __show = _get_exported_value('methods', 'show') rpy2/rinterface_lib/conversion.py:45: in _ cdata = function(*args, **kwargs) rpy2/rinterface.py:890: in __call__ raise embedded.RRuntimeError(_rinterface._geterrmessage()) E rpy2.rinterface_lib.embedded.RRuntimeError: Error in dyn.load(file, DLLpath = DLLpath, ...) : E unable to load shared object '/usr/lib/R/library/methods/libs/methods.so': E Error loading shared library libR.so: No such file or directory (needed by /usr/lib/R/library/methods/libs/methods.so) ____________ ERROR collecting rpy2/tests/robjects/lib/test_tidyr.py ____________ rpy2/tests/robjects/lib/test_tidyr.py:3: in from rpy2.robjects import packages rpy2/robjects/__init__.py:21: in from rpy2.robjects.robject import RObjectMixin, RObject rpy2/robjects/robject.py:81: in class RObjectMixin(abc.ABC): rpy2/robjects/robject.py:93: in RObjectMixin __show = _get_exported_value('methods', 'show') rpy2/rinterface_lib/conversion.py:45: in _ cdata = function(*args, **kwargs) rpy2/rinterface.py:890: in __call__ raise embedded.RRuntimeError(_rinterface._geterrmessage()) E rpy2.rinterface_lib.embedded.RRuntimeError: Error in dyn.load(file, DLLpath = DLLpath, ...) : E unable to load shared object '/usr/lib/R/library/methods/libs/methods.so': E Error loading shared library libR.so: No such file or directory (needed by /usr/lib/R/library/methods/libs/methods.so) ______________ ERROR collecting rpy2/tests/robjects/test_array.py ______________ rpy2/tests/robjects/test_array.py:2: in import rpy2.robjects as robjects rpy2/robjects/__init__.py:21: in from rpy2.robjects.robject import RObjectMixin, RObject rpy2/robjects/robject.py:81: in class RObjectMixin(abc.ABC): rpy2/robjects/robject.py:93: in RObjectMixin __show = _get_exported_value('methods', 'show') rpy2/rinterface_lib/conversion.py:45: in _ cdata = function(*args, **kwargs) rpy2/rinterface.py:890: in __call__ raise embedded.RRuntimeError(_rinterface._geterrmessage()) E rpy2.rinterface_lib.embedded.RRuntimeError: Error in dyn.load(file, DLLpath = DLLpath, ...) : E unable to load shared object '/usr/lib/R/library/methods/libs/methods.so': E Error loading shared library libR.so: No such file or directory (needed by /usr/lib/R/library/methods/libs/methods.so) ___________ ERROR collecting rpy2/tests/robjects/test_conversion.py ____________ rpy2/tests/robjects/test_conversion.py:5: in from rpy2 import robjects rpy2/robjects/__init__.py:21: in from rpy2.robjects.robject import RObjectMixin, RObject rpy2/robjects/robject.py:81: in class RObjectMixin(abc.ABC): rpy2/robjects/robject.py:93: in RObjectMixin __show = _get_exported_value('methods', 'show') rpy2/rinterface_lib/conversion.py:45: in _ cdata = function(*args, **kwargs) rpy2/rinterface.py:890: in __call__ raise embedded.RRuntimeError(_rinterface._geterrmessage()) E rpy2.rinterface_lib.embedded.RRuntimeError: Error in dyn.load(file, DLLpath = DLLpath, ...) : E unable to load shared object '/usr/lib/R/library/methods/libs/methods.so': E Error loading shared library libR.so: No such file or directory (needed by /usr/lib/R/library/methods/libs/methods.so) ________ ERROR collecting rpy2/tests/robjects/test_conversion_numpy.py _________ rpy2/tests/robjects/test_conversion_numpy.py:3: in from rpy2 import robjects rpy2/robjects/__init__.py:21: in from rpy2.robjects.robject import RObjectMixin, RObject rpy2/robjects/robject.py:81: in class RObjectMixin(abc.ABC): rpy2/robjects/robject.py:93: in RObjectMixin __show = _get_exported_value('methods', 'show') rpy2/rinterface_lib/conversion.py:45: in _ cdata = function(*args, **kwargs) rpy2/rinterface.py:890: in __call__ raise embedded.RRuntimeError(_rinterface._geterrmessage()) E rpy2.rinterface_lib.embedded.RRuntimeError: Error in dyn.load(file, DLLpath = DLLpath, ...) : E unable to load shared object '/usr/lib/R/library/methods/libs/methods.so': E Error loading shared library libR.so: No such file or directory (needed by /usr/lib/R/library/methods/libs/methods.so) ____________ ERROR collecting rpy2/tests/robjects/test_dataframe.py ____________ rpy2/tests/robjects/test_dataframe.py:2: in import rpy2.robjects as robjects rpy2/robjects/__init__.py:21: in from rpy2.robjects.robject import RObjectMixin, RObject rpy2/robjects/robject.py:81: in class RObjectMixin(abc.ABC): rpy2/robjects/robject.py:93: in RObjectMixin __show = _get_exported_value('methods', 'show') rpy2/rinterface_lib/conversion.py:45: in _ cdata = function(*args, **kwargs) rpy2/rinterface.py:890: in __call__ raise embedded.RRuntimeError(_rinterface._geterrmessage()) E rpy2.rinterface_lib.embedded.RRuntimeError: Error in dyn.load(file, DLLpath = DLLpath, ...) : E unable to load shared object '/usr/lib/R/library/methods/libs/methods.so': E Error loading shared library libR.so: No such file or directory (needed by /usr/lib/R/library/methods/libs/methods.so) ___________ ERROR collecting rpy2/tests/robjects/test_environment.py ___________ rpy2/tests/robjects/test_environment.py:2: in import rpy2.robjects as robjects rpy2/robjects/__init__.py:21: in from rpy2.robjects.robject import RObjectMixin, RObject rpy2/robjects/robject.py:81: in class RObjectMixin(abc.ABC): rpy2/robjects/robject.py:93: in RObjectMixin __show = _get_exported_value('methods', 'show') rpy2/rinterface_lib/conversion.py:45: in _ cdata = function(*args, **kwargs) rpy2/rinterface.py:890: in __call__ raise embedded.RRuntimeError(_rinterface._geterrmessage()) E rpy2.rinterface_lib.embedded.RRuntimeError: Error in dyn.load(file, DLLpath = DLLpath, ...) : E unable to load shared object '/usr/lib/R/library/methods/libs/methods.so': E Error loading shared library libR.so: No such file or directory (needed by /usr/lib/R/library/methods/libs/methods.so) _____________ ERROR collecting rpy2/tests/robjects/test_formula.py _____________ rpy2/tests/robjects/test_formula.py:2: in import rpy2.robjects as robjects rpy2/robjects/__init__.py:21: in from rpy2.robjects.robject import RObjectMixin, RObject rpy2/robjects/robject.py:81: in class RObjectMixin(abc.ABC): rpy2/robjects/robject.py:93: in RObjectMixin __show = _get_exported_value('methods', 'show') rpy2/rinterface_lib/conversion.py:45: in _ cdata = function(*args, **kwargs) rpy2/rinterface.py:890: in __call__ raise embedded.RRuntimeError(_rinterface._geterrmessage()) E rpy2.rinterface_lib.embedded.RRuntimeError: Error in dyn.load(file, DLLpath = DLLpath, ...) : E unable to load shared object '/usr/lib/R/library/methods/libs/methods.so': E Error loading shared library libR.so: No such file or directory (needed by /usr/lib/R/library/methods/libs/methods.so) ____________ ERROR collecting rpy2/tests/robjects/test_function.py _____________ rpy2/tests/robjects/test_function.py:3: in import rpy2.robjects as robjects rpy2/robjects/__init__.py:21: in from rpy2.robjects.robject import RObjectMixin, RObject rpy2/robjects/robject.py:81: in class RObjectMixin(abc.ABC): rpy2/robjects/robject.py:93: in RObjectMixin __show = _get_exported_value('methods', 'show') rpy2/rinterface_lib/conversion.py:45: in _ cdata = function(*args, **kwargs) rpy2/rinterface.py:890: in __call__ raise embedded.RRuntimeError(_rinterface._geterrmessage()) E rpy2.rinterface_lib.embedded.RRuntimeError: Error in dyn.load(file, DLLpath = DLLpath, ...) : E unable to load shared object '/usr/lib/R/library/methods/libs/methods.so': E Error loading shared library libR.so: No such file or directory (needed by /usr/lib/R/library/methods/libs/methods.so) ______________ ERROR collecting rpy2/tests/robjects/test_help.py _______________ rpy2/tests/robjects/test_help.py:3: in import rpy2.robjects as robjects rpy2/robjects/__init__.py:21: in from rpy2.robjects.robject import RObjectMixin, RObject rpy2/robjects/robject.py:81: in class RObjectMixin(abc.ABC): rpy2/robjects/robject.py:93: in RObjectMixin __show = _get_exported_value('methods', 'show') rpy2/rinterface_lib/conversion.py:45: in _ cdata = function(*args, **kwargs) rpy2/rinterface.py:890: in __call__ raise embedded.RRuntimeError(_rinterface._geterrmessage()) E rpy2.rinterface_lib.embedded.RRuntimeError: Error in dyn.load(file, DLLpath = DLLpath, ...) : E unable to load shared object '/usr/lib/R/library/methods/libs/methods.so': E Error loading shared library libR.so: No such file or directory (needed by /usr/lib/R/library/methods/libs/methods.so) ____________ ERROR collecting rpy2/tests/robjects/test_language.py _____________ rpy2/tests/robjects/test_language.py:2: in import rpy2.robjects as robjects rpy2/robjects/__init__.py:21: in from rpy2.robjects.robject import RObjectMixin, RObject rpy2/robjects/robject.py:81: in class RObjectMixin(abc.ABC): rpy2/robjects/robject.py:93: in RObjectMixin __show = _get_exported_value('methods', 'show') rpy2/rinterface_lib/conversion.py:45: in _ cdata = function(*args, **kwargs) rpy2/rinterface.py:890: in __call__ raise embedded.RRuntimeError(_rinterface._geterrmessage()) E rpy2.rinterface_lib.embedded.RRuntimeError: Error in dyn.load(file, DLLpath = DLLpath, ...) : E unable to load shared object '/usr/lib/R/library/methods/libs/methods.so': E Error loading shared library libR.so: No such file or directory (needed by /usr/lib/R/library/methods/libs/methods.so) _____________ ERROR collecting rpy2/tests/robjects/test_methods.py _____________ rpy2/tests/robjects/test_methods.py:4: in import rpy2.robjects as robjects rpy2/robjects/__init__.py:21: in from rpy2.robjects.robject import RObjectMixin, RObject rpy2/robjects/robject.py:81: in class RObjectMixin(abc.ABC): rpy2/robjects/robject.py:93: in RObjectMixin __show = _get_exported_value('methods', 'show') rpy2/rinterface_lib/conversion.py:45: in _ cdata = function(*args, **kwargs) rpy2/rinterface.py:890: in __call__ raise embedded.RRuntimeError(_rinterface._geterrmessage()) E rpy2.rinterface_lib.embedded.RRuntimeError: Error in dyn.load(file, DLLpath = DLLpath, ...) : E unable to load shared object '/usr/lib/R/library/methods/libs/methods.so': E Error loading shared library libR.so: No such file or directory (needed by /usr/lib/R/library/methods/libs/methods.so) ____________ ERROR collecting rpy2/tests/robjects/test_packages.py _____________ rpy2/tests/robjects/test_packages.py:5: in import rpy2.robjects as robjects rpy2/robjects/__init__.py:21: in from rpy2.robjects.robject import RObjectMixin, RObject rpy2/robjects/robject.py:81: in class RObjectMixin(abc.ABC): rpy2/robjects/robject.py:93: in RObjectMixin __show = _get_exported_value('methods', 'show') rpy2/rinterface_lib/conversion.py:45: in _ cdata = function(*args, **kwargs) rpy2/rinterface.py:890: in __call__ raise embedded.RRuntimeError(_rinterface._geterrmessage()) E rpy2.rinterface_lib.embedded.RRuntimeError: Error in dyn.load(file, DLLpath = DLLpath, ...) : E unable to load shared object '/usr/lib/R/library/methods/libs/methods.so': E Error loading shared library libR.so: No such file or directory (needed by /usr/lib/R/library/methods/libs/methods.so) _________ ERROR collecting rpy2/tests/robjects/test_packages_utils.py __________ rpy2/tests/robjects/test_packages_utils.py:2: in import rpy2.robjects.packages_utils as p_u rpy2/robjects/__init__.py:21: in from rpy2.robjects.robject import RObjectMixin, RObject rpy2/robjects/robject.py:81: in class RObjectMixin(abc.ABC): rpy2/robjects/robject.py:93: in RObjectMixin __show = _get_exported_value('methods', 'show') rpy2/rinterface_lib/conversion.py:45: in _ cdata = function(*args, **kwargs) rpy2/rinterface.py:890: in __call__ raise embedded.RRuntimeError(_rinterface._geterrmessage()) E rpy2.rinterface_lib.embedded.RRuntimeError: Error in dyn.load(file, DLLpath = DLLpath, ...) : E unable to load shared object '/usr/lib/R/library/methods/libs/methods.so': E Error loading shared library libR.so: No such file or directory (needed by /usr/lib/R/library/methods/libs/methods.so) _______ ERROR collecting rpy2/tests/robjects/test_pandas_conversions.py ________ rpy2/tests/robjects/test_pandas_conversions.py:8: in from rpy2 import robjects rpy2/robjects/__init__.py:21: in from rpy2.robjects.robject import RObjectMixin, RObject rpy2/robjects/robject.py:81: in class RObjectMixin(abc.ABC): rpy2/robjects/robject.py:93: in RObjectMixin __show = _get_exported_value('methods', 'show') rpy2/rinterface_lib/conversion.py:45: in _ cdata = function(*args, **kwargs) rpy2/rinterface.py:890: in __call__ raise embedded.RRuntimeError(_rinterface._geterrmessage()) E rpy2.rinterface_lib.embedded.RRuntimeError: Error in dyn.load(file, DLLpath = DLLpath, ...) : E unable to load shared object '/usr/lib/R/library/methods/libs/methods.so': E Error loading shared library libR.so: No such file or directory (needed by /usr/lib/R/library/methods/libs/methods.so) ____________ ERROR collecting rpy2/tests/robjects/test_robjects.py _____________ rpy2/tests/robjects/test_robjects.py:3: in import rpy2.robjects as robjects rpy2/robjects/__init__.py:21: in from rpy2.robjects.robject import RObjectMixin, RObject rpy2/robjects/robject.py:81: in class RObjectMixin(abc.ABC): rpy2/robjects/robject.py:93: in RObjectMixin __show = _get_exported_value('methods', 'show') rpy2/rinterface_lib/conversion.py:45: in _ cdata = function(*args, **kwargs) rpy2/rinterface.py:890: in __call__ raise embedded.RRuntimeError(_rinterface._geterrmessage()) E rpy2.rinterface_lib.embedded.RRuntimeError: Error in dyn.load(file, DLLpath = DLLpath, ...) : E unable to load shared object '/usr/lib/R/library/methods/libs/methods.so': E Error loading shared library libR.so: No such file or directory (needed by /usr/lib/R/library/methods/libs/methods.so) _______________ ERROR collecting rpy2/tests/robjects/test_rs4.py _______________ rpy2/tests/robjects/test_rs4.py:2: in from rpy2 import robjects rpy2/robjects/__init__.py:21: in from rpy2.robjects.robject import RObjectMixin, RObject rpy2/robjects/robject.py:81: in class RObjectMixin(abc.ABC): rpy2/robjects/robject.py:93: in RObjectMixin __show = _get_exported_value('methods', 'show') rpy2/rinterface_lib/conversion.py:45: in _ cdata = function(*args, **kwargs) rpy2/rinterface.py:890: in __call__ raise embedded.RRuntimeError(_rinterface._geterrmessage()) E rpy2.rinterface_lib.embedded.RRuntimeError: Error in dyn.load(file, DLLpath = DLLpath, ...) : E unable to load shared object '/usr/lib/R/library/methods/libs/methods.so': E Error loading shared library libR.so: No such file or directory (needed by /usr/lib/R/library/methods/libs/methods.so) __________ ERROR collecting rpy2/tests/robjects/test_serialization.py __________ rpy2/tests/robjects/test_serialization.py:5: in from rpy2 import robjects rpy2/robjects/__init__.py:21: in from rpy2.robjects.robject import RObjectMixin, RObject rpy2/robjects/robject.py:81: in class RObjectMixin(abc.ABC): rpy2/robjects/robject.py:93: in RObjectMixin __show = _get_exported_value('methods', 'show') rpy2/rinterface_lib/conversion.py:45: in _ cdata = function(*args, **kwargs) rpy2/rinterface.py:890: in __call__ raise embedded.RRuntimeError(_rinterface._geterrmessage()) E rpy2.rinterface_lib.embedded.RRuntimeError: Error in dyn.load(file, DLLpath = DLLpath, ...) : E unable to load shared object '/usr/lib/R/library/methods/libs/methods.so': E Error loading shared library libR.so: No such file or directory (needed by /usr/lib/R/library/methods/libs/methods.so) _______ ERROR collecting rpy2/tests/robjects/test_translated_function.py _______ rpy2/tests/robjects/test_translated_function.py:3: in import rpy2.robjects as robjects rpy2/robjects/__init__.py:21: in from rpy2.robjects.robject import RObjectMixin, RObject rpy2/robjects/robject.py:81: in class RObjectMixin(abc.ABC): rpy2/robjects/robject.py:93: in RObjectMixin __show = _get_exported_value('methods', 'show') rpy2/rinterface_lib/conversion.py:45: in _ cdata = function(*args, **kwargs) rpy2/rinterface.py:890: in __call__ raise embedded.RRuntimeError(_rinterface._geterrmessage()) E rpy2.rinterface_lib.embedded.RRuntimeError: Error in dyn.load(file, DLLpath = DLLpath, ...) : E unable to load shared object '/usr/lib/R/library/methods/libs/methods.so': E Error loading shared library libR.so: No such file or directory (needed by /usr/lib/R/library/methods/libs/methods.so) _____________ ERROR collecting rpy2/tests/robjects/test_vector.py ______________ rpy2/tests/robjects/test_vector.py:2: in import rpy2.robjects as robjects rpy2/robjects/__init__.py:21: in from rpy2.robjects.robject import RObjectMixin, RObject rpy2/robjects/robject.py:81: in class RObjectMixin(abc.ABC): rpy2/robjects/robject.py:93: in RObjectMixin __show = _get_exported_value('methods', 'show') rpy2/rinterface_lib/conversion.py:45: in _ cdata = function(*args, **kwargs) rpy2/rinterface.py:890: in __call__ raise embedded.RRuntimeError(_rinterface._geterrmessage()) E rpy2.rinterface_lib.embedded.RRuntimeError: Error in dyn.load(file, DLLpath = DLLpath, ...) : E unable to load shared object '/usr/lib/R/library/methods/libs/methods.so': E Error loading shared library libR.so: No such file or directory (needed by /usr/lib/R/library/methods/libs/methods.so) _________ ERROR collecting rpy2/tests/robjects/test_vector_datetime.py _________ rpy2/tests/robjects/test_vector_datetime.py:9: in from rpy2 import robjects rpy2/robjects/__init__.py:21: in from rpy2.robjects.robject import RObjectMixin, RObject rpy2/robjects/robject.py:81: in class RObjectMixin(abc.ABC): rpy2/robjects/robject.py:93: in RObjectMixin __show = _get_exported_value('methods', 'show') rpy2/rinterface_lib/conversion.py:45: in _ cdata = function(*args, **kwargs) rpy2/rinterface.py:890: in __call__ raise embedded.RRuntimeError(_rinterface._geterrmessage()) E rpy2.rinterface_lib.embedded.RRuntimeError: Error in dyn.load(file, DLLpath = DLLpath, ...) : E unable to load shared object '/usr/lib/R/library/methods/libs/methods.so': E Error loading shared library libR.so: No such file or directory (needed by /usr/lib/R/library/methods/libs/methods.so) _____ ERROR collecting rpy2/tests/robjects/test_vector_extractdelegator.py _____ rpy2/tests/robjects/test_vector_extractdelegator.py:6: in from rpy2 import robjects rpy2/robjects/__init__.py:21: in from rpy2.robjects.robject import RObjectMixin, RObject rpy2/robjects/robject.py:81: in class RObjectMixin(abc.ABC): rpy2/robjects/robject.py:93: in RObjectMixin __show = _get_exported_value('methods', 'show') rpy2/rinterface_lib/conversion.py:45: in _ cdata = function(*args, **kwargs) rpy2/rinterface.py:890: in __call__ raise embedded.RRuntimeError(_rinterface._geterrmessage()) E rpy2.rinterface_lib.embedded.RRuntimeError: Error in dyn.load(file, DLLpath = DLLpath, ...) : E unable to load shared object '/usr/lib/R/library/methods/libs/methods.so': E Error loading shared library libR.so: No such file or directory (needed by /usr/lib/R/library/methods/libs/methods.so) __________ ERROR collecting rpy2/tests/robjects/test_vector_factor.py __________ rpy2/tests/robjects/test_vector_factor.py:3: in from rpy2 import robjects rpy2/robjects/__init__.py:21: in from rpy2.robjects.robject import RObjectMixin, RObject rpy2/robjects/robject.py:81: in class RObjectMixin(abc.ABC): rpy2/robjects/robject.py:93: in RObjectMixin __show = _get_exported_value('methods', 'show') rpy2/rinterface_lib/conversion.py:45: in _ cdata = function(*args, **kwargs) rpy2/rinterface.py:890: in __call__ raise embedded.RRuntimeError(_rinterface._geterrmessage()) E rpy2.rinterface_lib.embedded.RRuntimeError: Error in dyn.load(file, DLLpath = DLLpath, ...) : E unable to load shared object '/usr/lib/R/library/methods/libs/methods.so': E Error loading shared library libR.so: No such file or directory (needed by /usr/lib/R/library/methods/libs/methods.so) =============================== warnings summary =============================== rpy2/rinterface.py:1189 rpy2/rinterface.py:1189 /home/buildozer/aports/community/py3-rpy2/src/rpy2-3.5.17/rpy2/rinterface.py:1189: UserWarning: Environment variable "LD_LIBRARY_PATH" redefined by R and overriding existing variable. warnings.warn( rpy2/rinterface.py:1189 rpy2/rinterface.py:1189 /home/buildozer/aports/community/py3-rpy2/src/rpy2-3.5.17/rpy2/rinterface.py:1189: UserWarning: Environment variable "SHLVL" redefined by R and overriding existing variable. warnings.warn( rpy2/rinterface.py:1189 rpy2/rinterface.py:1189 /home/buildozer/aports/community/py3-rpy2/src/rpy2-3.5.17/rpy2/rinterface.py:1189: UserWarning: Environment variable "R_SESSION_TMPDIR" redefined by R and overriding existing variable. warnings.warn( -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html =========================== short test summary info ============================ ERROR rpy2/tests/ipython/test_ggplot.py - rpy2.rinterface_lib.embedded.RRunti... ERROR rpy2/tests/ipython/test_html.py - rpy2.rinterface_lib.embedded.RRuntime... ERROR rpy2/tests/ipython/test_rmagic.py - rpy2.rinterface_lib.embedded.RRunti... ERROR rpy2/tests/robjects/lib/test_dbplyr.py - rpy2.rinterface_lib.embedded.R... ERROR rpy2/tests/robjects/lib/test_dplyr.py - rpy2.rinterface_lib.embedded.RR... ERROR rpy2/tests/robjects/lib/test_ggplot2.py - rpy2.rinterface_lib.embedded.... ERROR rpy2/tests/robjects/lib/test_grdevices.py - rpy2.rinterface_lib.embedde... ERROR rpy2/tests/robjects/lib/test_grid.py - rpy2.rinterface_lib.embedded.RRu... ERROR rpy2/tests/robjects/lib/test_tidyr.py - rpy2.rinterface_lib.embedded.RR... ERROR rpy2/tests/robjects/test_array.py - rpy2.rinterface_lib.embedded.RRunti... ERROR rpy2/tests/robjects/test_conversion.py - rpy2.rinterface_lib.embedded.R... ERROR rpy2/tests/robjects/test_conversion_numpy.py - rpy2.rinterface_lib.embe... ERROR rpy2/tests/robjects/test_dataframe.py - rpy2.rinterface_lib.embedded.RR... ERROR rpy2/tests/robjects/test_environment.py - rpy2.rinterface_lib.embedded.... ERROR rpy2/tests/robjects/test_formula.py - rpy2.rinterface_lib.embedded.RRun... ERROR rpy2/tests/robjects/test_function.py - rpy2.rinterface_lib.embedded.RRu... ERROR rpy2/tests/robjects/test_help.py - rpy2.rinterface_lib.embedded.RRuntim... ERROR rpy2/tests/robjects/test_language.py - rpy2.rinterface_lib.embedded.RRu... ERROR rpy2/tests/robjects/test_methods.py - rpy2.rinterface_lib.embedded.RRun... ERROR rpy2/tests/robjects/test_packages.py - rpy2.rinterface_lib.embedded.RRu... ERROR rpy2/tests/robjects/test_packages_utils.py - rpy2.rinterface_lib.embedd... ERROR rpy2/tests/robjects/test_pandas_conversions.py - rpy2.rinterface_lib.em... ERROR rpy2/tests/robjects/test_robjects.py - rpy2.rinterface_lib.embedded.RRu... ERROR rpy2/tests/robjects/test_rs4.py - rpy2.rinterface_lib.embedded.RRuntime... ERROR rpy2/tests/robjects/test_serialization.py - rpy2.rinterface_lib.embedde... ERROR rpy2/tests/robjects/test_translated_function.py - rpy2.rinterface_lib.e... ERROR rpy2/tests/robjects/test_vector.py - rpy2.rinterface_lib.embedded.RRunt... ERROR rpy2/tests/robjects/test_vector_datetime.py - rpy2.rinterface_lib.embed... ERROR rpy2/tests/robjects/test_vector_extractdelegator.py - rpy2.rinterface_l... ERROR rpy2/tests/robjects/test_vector_factor.py - rpy2.rinterface_lib.embedde... !!!!!!!!!!!!!!!!!!! Interrupted: 30 errors during collection !!!!!!!!!!!!!!!!!!! ================= 1 deselected, 6 warnings, 30 errors in 8.52s ================= >>> ERROR: py3-rpy2: check failed >>> py3-rpy2: Uninstalling dependencies... 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(126/130) Purging libuuid (2.41-r7) (127/130) Purging libxau (1.0.12-r0) (128/130) Purging pixman (0.46.0-r0) (129/130) Purging tcl (8.6.16-r0) (130/130) Purging tzdata (2025b-r0) Executing busybox-1.37.0-r17.trigger OK: 400 MiB in 104 packages