>>> py3-biopython: Building community/py3-biopython 1.85-r0 (using abuild 3.16.0_rc4-r0) started Tue, 04 Nov 2025 22:55:50 +0000
>>> py3-biopython: Validating /home/buildozer/aports/community/py3-biopython/APKBUILD...
>>> WARNING: py3-biopython: No maintainer
>>> py3-biopython: Analyzing dependencies...
>>> py3-biopython: Installing for build: build-base py3-numpy python3 py3-gpep517 py3-setuptools py3-wheel py3-numpy-dev python3-dev
( 1/31) Installing libbz2 (1.0.8-r6)
( 2/31) Installing libffi (3.5.2-r0)
( 3/31) Installing gdbm (1.26-r0)
( 4/31) Installing xz-libs (5.8.1-r0)
( 5/31) Installing mpdecimal (4.0.1-r0)
( 6/31) Installing libpanelw (6.5_p20251010-r0)
( 7/31) Installing sqlite-libs (3.50.4-r1)
( 8/31) Installing python3 (3.12.12-r0)
( 9/31) Installing python3-pycache-pyc0 (3.12.12-r0)
(10/31) Installing pyc (3.12.12-r0)
(11/31) Installing py3-numpy-pyc (2.3.4-r0)
(12/31) Installing python3-pyc (3.12.12-r0)
(13/31) Installing libgfortran (15.2.0-r2)
(14/31) Installing openblas (0.3.30-r0)
(15/31) Installing py3-numpy (2.3.4-r0)
(16/31) Installing py3-numpy-tests (2.3.4-r0)
(17/31) Installing py3-installer (0.7.0-r2)
(18/31) Installing py3-installer-pyc (0.7.0-r2)
(19/31) Installing py3-gpep517 (19-r1)
(20/31) Installing py3-gpep517-pyc (19-r1)
(21/31) Installing py3-parsing (3.2.3-r0)
(22/31) Installing py3-parsing-pyc (3.2.3-r0)
(23/31) Installing py3-packaging (25.0-r0)
(24/31) Installing py3-packaging-pyc (25.0-r0)
(25/31) Installing py3-setuptools (80.9.0-r2)
(26/31) Installing py3-setuptools-pyc (80.9.0-r2)
(27/31) Installing py3-wheel (0.46.1-r0)
(28/31) Installing py3-wheel-pyc (0.46.1-r0)
(29/31) Installing py3-numpy-dev (2.3.4-r0)
(30/31) Installing python3-dev (3.12.12-r0)
(31/31) Installing .makedepends-py3-biopython (20251104.225602)
busybox-1.37.0-r24.trigger: Executing script...
OK: 466 MiB in 136 packages
>>> py3-biopython: Cleaning up srcdir
>>> py3-biopython: Cleaning up pkgdir
>>> py3-biopython: Cleaning up tmpdir
>>> py3-biopython: Fetching https://distfiles.alpinelinux.org/distfiles/v3.23/biopython-1.85.tar.gz
/var/cache/distfiles/v3.23/biopython-1.85.tar.gz: OK
>>> py3-biopython: Fetching https://distfiles.alpinelinux.org/distfiles/v3.23/biopython-1.85.tar.gz
/var/cache/distfiles/v3.23/biopython-1.85.tar.gz: OK
>>> py3-biopython: Unpacking /var/cache/distfiles/v3.23/biopython-1.85.tar.gz...
2025-11-04 22:56:04,186 gpep517 INFO Building wheel via backend setuptools.build_meta:__legacy__
/usr/lib/python3.12/site-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated.
!!

        ********************************************************************************
        Please consider removing the following classifiers in favor of a SPDX license expression:

        License :: Freely Distributable

        See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
        ********************************************************************************

!!
  self._finalize_license_expression()
2025-11-04 22:56:04,212 root INFO running bdist_wheel
2025-11-04 22:56:04,230 root INFO running build
2025-11-04 22:56:04,230 root INFO running build_py
2025-11-04 22:56:04,234 root INFO creating build/lib.linux-armv8l-cpython-312/Bio
2025-11-04 22:56:04,234 root INFO copying Bio/__init__.py -> build/lib.linux-armv8l-cpython-312/Bio
2025-11-04 22:56:04,235 root INFO copying Bio/MaxEntropy.py -> build/lib.linux-armv8l-cpython-312/Bio
2025-11-04 22:56:04,235 root INFO copying Bio/File.py -> build/lib.linux-armv8l-cpython-312/Bio
2025-11-04 22:56:04,235 root INFO copying Bio/bgzf.py -> build/lib.linux-armv8l-cpython-312/Bio
2025-11-04 22:56:04,236 root INFO copying Bio/kNN.py -> build/lib.linux-armv8l-cpython-312/Bio
2025-11-04 22:56:04,236 root INFO copying Bio/MarkovModel.py -> build/lib.linux-armv8l-cpython-312/Bio
2025-11-04 22:56:04,237 root INFO copying Bio/Seq.py -> build/lib.linux-armv8l-cpython-312/Bio
2025-11-04 22:56:04,237 root INFO copying Bio/_utils.py -> build/lib.linux-armv8l-cpython-312/Bio
2025-11-04 22:56:04,237 root INFO copying Bio/LogisticRegression.py -> build/lib.linux-armv8l-cpython-312/Bio
2025-11-04 22:56:04,238 root INFO copying Bio/SeqRecord.py -> build/lib.linux-armv8l-cpython-312/Bio
2025-11-04 22:56:04,238 root INFO copying Bio/SeqFeature.py -> build/lib.linux-armv8l-cpython-312/Bio
2025-11-04 22:56:04,239 root INFO copying Bio/NaiveBayes.py -> build/lib.linux-armv8l-cpython-312/Bio
2025-11-04 22:56:04,239 root INFO copying Bio/pairwise2.py -> build/lib.linux-armv8l-cpython-312/Bio
2025-11-04 22:56:04,239 root INFO creating build/lib.linux-armv8l-cpython-312/Bio/Affy
2025-11-04 22:56:04,239 root INFO copying Bio/Affy/__init__.py -> build/lib.linux-armv8l-cpython-312/Bio/Affy
2025-11-04 22:56:04,240 root INFO copying Bio/Affy/CelFile.py -> build/lib.linux-armv8l-cpython-312/Bio/Affy
2025-11-04 22:56:04,240 root INFO creating build/lib.linux-armv8l-cpython-312/Bio/Align
2025-11-04 22:56:04,241 root INFO copying Bio/Align/__init__.py -> build/lib.linux-armv8l-cpython-312/Bio/Align
2025-11-04 22:56:04,241 root INFO copying Bio/Align/emboss.py -> build/lib.linux-armv8l-cpython-312/Bio/Align
2025-11-04 22:56:04,242 root INFO copying Bio/Align/a2m.py -> build/lib.linux-armv8l-cpython-312/Bio/Align
2025-11-04 22:56:04,242 root INFO copying Bio/Align/chain.py -> build/lib.linux-armv8l-cpython-312/Bio/Align
2025-11-04 22:56:04,242 root INFO copying Bio/Align/bed.py -> build/lib.linux-armv8l-cpython-312/Bio/Align
2025-11-04 22:56:04,242 root INFO copying Bio/Align/psl.py -> build/lib.linux-armv8l-cpython-312/Bio/Align
2025-11-04 22:56:04,243 root INFO copying Bio/Align/clustal.py -> build/lib.linux-armv8l-cpython-312/Bio/Align
2025-11-04 22:56:04,243 root INFO copying Bio/Align/msf.py -> build/lib.linux-armv8l-cpython-312/Bio/Align
2025-11-04 22:56:04,243 root INFO copying Bio/Align/tabular.py -> build/lib.linux-armv8l-cpython-312/Bio/Align
2025-11-04 22:56:04,244 root INFO copying Bio/Align/bigpsl.py -> build/lib.linux-armv8l-cpython-312/Bio/Align
2025-11-04 22:56:04,244 root INFO copying Bio/Align/phylip.py -> build/lib.linux-armv8l-cpython-312/Bio/Align
2025-11-04 22:56:04,244 root INFO copying Bio/Align/exonerate.py -> build/lib.linux-armv8l-cpython-312/Bio/Align
2025-11-04 22:56:04,245 root INFO copying Bio/Align/fasta.py -> build/lib.linux-armv8l-cpython-312/Bio/Align
2025-11-04 22:56:04,245 root INFO copying Bio/Align/sam.py -> build/lib.linux-armv8l-cpython-312/Bio/Align
2025-11-04 22:56:04,245 root INFO copying Bio/Align/AlignInfo.py -> build/lib.linux-armv8l-cpython-312/Bio/Align
2025-11-04 22:56:04,246 root INFO copying Bio/Align/stockholm.py -> build/lib.linux-armv8l-cpython-312/Bio/Align
2025-11-04 22:56:04,246 root INFO copying Bio/Align/maf.py -> build/lib.linux-armv8l-cpython-312/Bio/Align
2025-11-04 22:56:04,246 root INFO copying Bio/Align/mauve.py -> build/lib.linux-armv8l-cpython-312/Bio/Align
2025-11-04 22:56:04,246 root INFO copying Bio/Align/nexus.py -> build/lib.linux-armv8l-cpython-312/Bio/Align
2025-11-04 22:56:04,247 root INFO copying Bio/Align/bigmaf.py -> build/lib.linux-armv8l-cpython-312/Bio/Align
2025-11-04 22:56:04,247 root INFO copying Bio/Align/hhr.py -> build/lib.linux-armv8l-cpython-312/Bio/Align
2025-11-04 22:56:04,247 root INFO copying Bio/Align/interfaces.py -> build/lib.linux-armv8l-cpython-312/Bio/Align
2025-11-04 22:56:04,248 root INFO copying Bio/Align/analysis.py -> build/lib.linux-armv8l-cpython-312/Bio/Align
2025-11-04 22:56:04,248 root INFO copying Bio/Align/bigbed.py -> build/lib.linux-armv8l-cpython-312/Bio/Align
2025-11-04 22:56:04,248 root INFO creating build/lib.linux-armv8l-cpython-312/Bio/Align/Applications
2025-11-04 22:56:04,249 root INFO copying Bio/Align/Applications/__init__.py -> build/lib.linux-armv8l-cpython-312/Bio/Align/Applications
2025-11-04 22:56:04,249 root INFO copying Bio/Align/Applications/_Clustalw.py -> build/lib.linux-armv8l-cpython-312/Bio/Align/Applications
2025-11-04 22:56:04,249 root INFO copying Bio/Align/Applications/_TCoffee.py -> build/lib.linux-armv8l-cpython-312/Bio/Align/Applications
2025-11-04 22:56:04,249 root INFO copying Bio/Align/Applications/_Mafft.py -> build/lib.linux-armv8l-cpython-312/Bio/Align/Applications
2025-11-04 22:56:04,250 root INFO copying Bio/Align/Applications/_Muscle.py -> build/lib.linux-armv8l-cpython-312/Bio/Align/Applications
2025-11-04 22:56:04,250 root INFO copying Bio/Align/Applications/_Probcons.py -> build/lib.linux-armv8l-cpython-312/Bio/Align/Applications
2025-11-04 22:56:04,250 root INFO copying Bio/Align/Applications/_Prank.py -> build/lib.linux-armv8l-cpython-312/Bio/Align/Applications
2025-11-04 22:56:04,251 root INFO copying Bio/Align/Applications/_MSAProbs.py -> build/lib.linux-armv8l-cpython-312/Bio/Align/Applications
2025-11-04 22:56:04,251 root INFO copying Bio/Align/Applications/_ClustalOmega.py -> build/lib.linux-armv8l-cpython-312/Bio/Align/Applications
2025-11-04 22:56:04,251 root INFO copying Bio/Align/Applications/_Dialign.py -> build/lib.linux-armv8l-cpython-312/Bio/Align/Applications
2025-11-04 22:56:04,251 root INFO creating build/lib.linux-armv8l-cpython-312/Bio/Align/substitution_matrices
2025-11-04 22:56:04,252 root INFO copying Bio/Align/substitution_matrices/__init__.py -> build/lib.linux-armv8l-cpython-312/Bio/Align/substitution_matrices
2025-11-04 22:56:04,252 root INFO creating build/lib.linux-armv8l-cpython-312/Bio/AlignIO
2025-11-04 22:56:04,252 root INFO copying Bio/AlignIO/__init__.py -> build/lib.linux-armv8l-cpython-312/Bio/AlignIO
2025-11-04 22:56:04,253 root INFO copying Bio/AlignIO/Interfaces.py -> build/lib.linux-armv8l-cpython-312/Bio/AlignIO
2025-11-04 22:56:04,253 root INFO copying Bio/AlignIO/ClustalIO.py -> build/lib.linux-armv8l-cpython-312/Bio/AlignIO
2025-11-04 22:56:04,253 root INFO copying Bio/AlignIO/PhylipIO.py -> build/lib.linux-armv8l-cpython-312/Bio/AlignIO
2025-11-04 22:56:04,253 root INFO copying Bio/AlignIO/MsfIO.py -> build/lib.linux-armv8l-cpython-312/Bio/AlignIO
2025-11-04 22:56:04,254 root INFO copying Bio/AlignIO/MauveIO.py -> build/lib.linux-armv8l-cpython-312/Bio/AlignIO
2025-11-04 22:56:04,254 root INFO copying Bio/AlignIO/StockholmIO.py -> build/lib.linux-armv8l-cpython-312/Bio/AlignIO
2025-11-04 22:56:04,254 root INFO copying Bio/AlignIO/EmbossIO.py -> build/lib.linux-armv8l-cpython-312/Bio/AlignIO
2025-11-04 22:56:04,255 root INFO copying Bio/AlignIO/FastaIO.py -> build/lib.linux-armv8l-cpython-312/Bio/AlignIO
2025-11-04 22:56:04,255 root INFO copying Bio/AlignIO/MafIO.py -> build/lib.linux-armv8l-cpython-312/Bio/AlignIO
2025-11-04 22:56:04,255 root INFO copying Bio/AlignIO/NexusIO.py -> build/lib.linux-armv8l-cpython-312/Bio/AlignIO
2025-11-04 22:56:04,255 root INFO creating build/lib.linux-armv8l-cpython-312/Bio/Alphabet
2025-11-04 22:56:04,256 root INFO copying Bio/Alphabet/__init__.py -> build/lib.linux-armv8l-cpython-312/Bio/Alphabet
2025-11-04 22:56:04,256 root INFO creating build/lib.linux-armv8l-cpython-312/Bio/Application
2025-11-04 22:56:04,256 root INFO copying Bio/Application/__init__.py -> build/lib.linux-armv8l-cpython-312/Bio/Application
2025-11-04 22:56:04,257 root INFO creating build/lib.linux-armv8l-cpython-312/Bio/Blast
2025-11-04 22:56:04,257 root INFO copying Bio/Blast/__init__.py -> build/lib.linux-armv8l-cpython-312/Bio/Blast
2025-11-04 22:56:04,257 root INFO copying Bio/Blast/_writers.py -> build/lib.linux-armv8l-cpython-312/Bio/Blast
2025-11-04 22:56:04,257 root INFO copying Bio/Blast/NCBIWWW.py -> build/lib.linux-armv8l-cpython-312/Bio/Blast
2025-11-04 22:56:04,258 root INFO copying Bio/Blast/Applications.py -> build/lib.linux-armv8l-cpython-312/Bio/Blast
2025-11-04 22:56:04,258 root INFO copying Bio/Blast/_parser.py -> build/lib.linux-armv8l-cpython-312/Bio/Blast
2025-11-04 22:56:04,258 root INFO copying Bio/Blast/NCBIXML.py -> build/lib.linux-armv8l-cpython-312/Bio/Blast
2025-11-04 22:56:04,259 root INFO creating build/lib.linux-armv8l-cpython-312/Bio/CAPS
2025-11-04 22:56:04,259 root INFO copying Bio/CAPS/__init__.py -> build/lib.linux-armv8l-cpython-312/Bio/CAPS
2025-11-04 22:56:04,259 root INFO creating build/lib.linux-armv8l-cpython-312/Bio/Cluster
2025-11-04 22:56:04,260 root INFO copying Bio/Cluster/__init__.py -> build/lib.linux-armv8l-cpython-312/Bio/Cluster
2025-11-04 22:56:04,260 root INFO creating build/lib.linux-armv8l-cpython-312/Bio/codonalign
2025-11-04 22:56:04,260 root INFO copying Bio/codonalign/__init__.py -> build/lib.linux-armv8l-cpython-312/Bio/codonalign
2025-11-04 22:56:04,260 root INFO copying Bio/codonalign/codonseq.py -> build/lib.linux-armv8l-cpython-312/Bio/codonalign
2025-11-04 22:56:04,261 root INFO copying Bio/codonalign/codonalignment.py -> build/lib.linux-armv8l-cpython-312/Bio/codonalign
2025-11-04 22:56:04,261 root INFO creating build/lib.linux-armv8l-cpython-312/Bio/Compass
2025-11-04 22:56:04,261 root INFO copying Bio/Compass/__init__.py -> build/lib.linux-armv8l-cpython-312/Bio/Compass
2025-11-04 22:56:04,262 root INFO creating build/lib.linux-armv8l-cpython-312/Bio/Data
2025-11-04 22:56:04,262 root INFO copying Bio/Data/__init__.py -> build/lib.linux-armv8l-cpython-312/Bio/Data
2025-11-04 22:56:04,262 root INFO copying Bio/Data/IUPACData.py -> build/lib.linux-armv8l-cpython-312/Bio/Data
2025-11-04 22:56:04,262 root INFO copying Bio/Data/CodonTable.py -> build/lib.linux-armv8l-cpython-312/Bio/Data
2025-11-04 22:56:04,263 root INFO copying Bio/Data/PDBData.py -> build/lib.linux-armv8l-cpython-312/Bio/Data
2025-11-04 22:56:04,263 root INFO creating build/lib.linux-armv8l-cpython-312/Bio/Emboss
2025-11-04 22:56:04,263 root INFO copying Bio/Emboss/__init__.py -> build/lib.linux-armv8l-cpython-312/Bio/Emboss
2025-11-04 22:56:04,264 root INFO copying Bio/Emboss/Primer3.py -> build/lib.linux-armv8l-cpython-312/Bio/Emboss
2025-11-04 22:56:04,264 root INFO copying Bio/Emboss/Applications.py -> build/lib.linux-armv8l-cpython-312/Bio/Emboss
2025-11-04 22:56:04,264 root INFO copying Bio/Emboss/PrimerSearch.py -> build/lib.linux-armv8l-cpython-312/Bio/Emboss
2025-11-04 22:56:04,264 root INFO creating build/lib.linux-armv8l-cpython-312/Bio/Entrez
2025-11-04 22:56:04,265 root INFO copying Bio/Entrez/__init__.py -> build/lib.linux-armv8l-cpython-312/Bio/Entrez
2025-11-04 22:56:04,265 root INFO copying Bio/Entrez/Parser.py -> build/lib.linux-armv8l-cpython-312/Bio/Entrez
2025-11-04 22:56:04,265 root INFO creating build/lib.linux-armv8l-cpython-312/Bio/ExPASy
2025-11-04 22:56:04,266 root INFO copying Bio/ExPASy/__init__.py -> build/lib.linux-armv8l-cpython-312/Bio/ExPASy
2025-11-04 22:56:04,266 root INFO copying Bio/ExPASy/Prosite.py -> build/lib.linux-armv8l-cpython-312/Bio/ExPASy
2025-11-04 22:56:04,266 root INFO copying Bio/ExPASy/ScanProsite.py -> build/lib.linux-armv8l-cpython-312/Bio/ExPASy
2025-11-04 22:56:04,266 root INFO copying Bio/ExPASy/Prodoc.py -> build/lib.linux-armv8l-cpython-312/Bio/ExPASy
2025-11-04 22:56:04,267 root INFO copying Bio/ExPASy/Enzyme.py -> build/lib.linux-armv8l-cpython-312/Bio/ExPASy
2025-11-04 22:56:04,267 root INFO copying Bio/ExPASy/cellosaurus.py -> build/lib.linux-armv8l-cpython-312/Bio/ExPASy
2025-11-04 22:56:04,267 root INFO creating build/lib.linux-armv8l-cpython-312/Bio/GenBank
2025-11-04 22:56:04,268 root INFO copying Bio/GenBank/__init__.py -> build/lib.linux-armv8l-cpython-312/Bio/GenBank
2025-11-04 22:56:04,268 root INFO copying Bio/GenBank/Record.py -> build/lib.linux-armv8l-cpython-312/Bio/GenBank
2025-11-04 22:56:04,268 root INFO copying Bio/GenBank/utils.py -> build/lib.linux-armv8l-cpython-312/Bio/GenBank
2025-11-04 22:56:04,268 root INFO copying Bio/GenBank/Scanner.py -> build/lib.linux-armv8l-cpython-312/Bio/GenBank
2025-11-04 22:56:04,269 root INFO creating build/lib.linux-armv8l-cpython-312/Bio/Geo
2025-11-04 22:56:04,269 root INFO copying Bio/Geo/__init__.py -> build/lib.linux-armv8l-cpython-312/Bio/Geo
2025-11-04 22:56:04,269 root INFO copying Bio/Geo/Record.py -> build/lib.linux-armv8l-cpython-312/Bio/Geo
2025-11-04 22:56:04,270 root INFO creating build/lib.linux-armv8l-cpython-312/Bio/Graphics
2025-11-04 22:56:04,270 root INFO copying Bio/Graphics/__init__.py -> build/lib.linux-armv8l-cpython-312/Bio/Graphics
2025-11-04 22:56:04,270 root INFO copying Bio/Graphics/BasicChromosome.py -> build/lib.linux-armv8l-cpython-312/Bio/Graphics
2025-11-04 22:56:04,270 root INFO copying Bio/Graphics/KGML_vis.py -> build/lib.linux-armv8l-cpython-312/Bio/Graphics
2025-11-04 22:56:04,271 root INFO copying Bio/Graphics/Comparative.py -> build/lib.linux-armv8l-cpython-312/Bio/Graphics
2025-11-04 22:56:04,271 root INFO copying Bio/Graphics/ColorSpiral.py -> build/lib.linux-armv8l-cpython-312/Bio/Graphics
2025-11-04 22:56:04,271 root INFO copying Bio/Graphics/DisplayRepresentation.py -> build/lib.linux-armv8l-cpython-312/Bio/Graphics
2025-11-04 22:56:04,272 root INFO copying Bio/Graphics/Distribution.py -> build/lib.linux-armv8l-cpython-312/Bio/Graphics
2025-11-04 22:56:04,272 root INFO creating build/lib.linux-armv8l-cpython-312/Bio/Graphics/GenomeDiagram
2025-11-04 22:56:04,272 root INFO copying Bio/Graphics/GenomeDiagram/__init__.py -> build/lib.linux-armv8l-cpython-312/Bio/Graphics/GenomeDiagram
2025-11-04 22:56:04,272 root INFO copying Bio/Graphics/GenomeDiagram/_GraphSet.py -> build/lib.linux-armv8l-cpython-312/Bio/Graphics/GenomeDiagram
2025-11-04 22:56:04,273 root INFO copying Bio/Graphics/GenomeDiagram/_FeatureSet.py -> build/lib.linux-armv8l-cpython-312/Bio/Graphics/GenomeDiagram
2025-11-04 22:56:04,273 root INFO copying Bio/Graphics/GenomeDiagram/_Diagram.py -> build/lib.linux-armv8l-cpython-312/Bio/Graphics/GenomeDiagram
2025-11-04 22:56:04,273 root INFO copying Bio/Graphics/GenomeDiagram/_CrossLink.py -> build/lib.linux-armv8l-cpython-312/Bio/Graphics/GenomeDiagram
2025-11-04 22:56:04,274 root INFO copying Bio/Graphics/GenomeDiagram/_Track.py -> build/lib.linux-armv8l-cpython-312/Bio/Graphics/GenomeDiagram
2025-11-04 22:56:04,274 root INFO copying Bio/Graphics/GenomeDiagram/_Colors.py -> build/lib.linux-armv8l-cpython-312/Bio/Graphics/GenomeDiagram
2025-11-04 22:56:04,274 root INFO copying Bio/Graphics/GenomeDiagram/_Feature.py -> build/lib.linux-armv8l-cpython-312/Bio/Graphics/GenomeDiagram
2025-11-04 22:56:04,274 root INFO copying Bio/Graphics/GenomeDiagram/_CircularDrawer.py -> build/lib.linux-armv8l-cpython-312/Bio/Graphics/GenomeDiagram
2025-11-04 22:56:04,275 root INFO copying Bio/Graphics/GenomeDiagram/_LinearDrawer.py -> build/lib.linux-armv8l-cpython-312/Bio/Graphics/GenomeDiagram
2025-11-04 22:56:04,275 root INFO copying Bio/Graphics/GenomeDiagram/_Graph.py -> build/lib.linux-armv8l-cpython-312/Bio/Graphics/GenomeDiagram
2025-11-04 22:56:04,275 root INFO copying Bio/Graphics/GenomeDiagram/_AbstractDrawer.py -> build/lib.linux-armv8l-cpython-312/Bio/Graphics/GenomeDiagram
2025-11-04 22:56:04,276 root INFO creating build/lib.linux-armv8l-cpython-312/Bio/HMM
2025-11-04 22:56:04,276 root INFO copying Bio/HMM/__init__.py -> build/lib.linux-armv8l-cpython-312/Bio/HMM
2025-11-04 22:56:04,276 root INFO copying Bio/HMM/MarkovModel.py -> build/lib.linux-armv8l-cpython-312/Bio/HMM
2025-11-04 22:56:04,277 root INFO copying Bio/HMM/Utilities.py -> build/lib.linux-armv8l-cpython-312/Bio/HMM
2025-11-04 22:56:04,277 root INFO copying Bio/HMM/Trainer.py -> build/lib.linux-armv8l-cpython-312/Bio/HMM
2025-11-04 22:56:04,277 root INFO copying Bio/HMM/DynamicProgramming.py -> build/lib.linux-armv8l-cpython-312/Bio/HMM
2025-11-04 22:56:04,278 root INFO creating build/lib.linux-armv8l-cpython-312/Bio/KEGG
2025-11-04 22:56:04,278 root INFO copying Bio/KEGG/__init__.py -> build/lib.linux-armv8l-cpython-312/Bio/KEGG
2025-11-04 22:56:04,278 root INFO copying Bio/KEGG/REST.py -> build/lib.linux-armv8l-cpython-312/Bio/KEGG
2025-11-04 22:56:04,278 root INFO creating build/lib.linux-armv8l-cpython-312/Bio/KEGG/Compound
2025-11-04 22:56:04,279 root INFO copying Bio/KEGG/Compound/__init__.py -> build/lib.linux-armv8l-cpython-312/Bio/KEGG/Compound
2025-11-04 22:56:04,279 root INFO creating build/lib.linux-armv8l-cpython-312/Bio/KEGG/Enzyme
2025-11-04 22:56:04,279 root INFO copying Bio/KEGG/Enzyme/__init__.py -> build/lib.linux-armv8l-cpython-312/Bio/KEGG/Enzyme
2025-11-04 22:56:04,279 root INFO creating build/lib.linux-armv8l-cpython-312/Bio/KEGG/Gene
2025-11-04 22:56:04,280 root INFO copying Bio/KEGG/Gene/__init__.py -> build/lib.linux-armv8l-cpython-312/Bio/KEGG/Gene
2025-11-04 22:56:04,280 root INFO creating build/lib.linux-armv8l-cpython-312/Bio/KEGG/Map
2025-11-04 22:56:04,280 root INFO copying Bio/KEGG/Map/__init__.py -> build/lib.linux-armv8l-cpython-312/Bio/KEGG/Map
2025-11-04 22:56:04,281 root INFO creating build/lib.linux-armv8l-cpython-312/Bio/PDB/mmtf
2025-11-04 22:56:04,281 root INFO copying Bio/PDB/mmtf/__init__.py -> build/lib.linux-armv8l-cpython-312/Bio/PDB/mmtf
2025-11-04 22:56:04,281 root INFO copying Bio/PDB/mmtf/mmtfio.py -> build/lib.linux-armv8l-cpython-312/Bio/PDB/mmtf
2025-11-04 22:56:04,281 root INFO copying Bio/PDB/mmtf/DefaultParser.py -> build/lib.linux-armv8l-cpython-312/Bio/PDB/mmtf
2025-11-04 22:56:04,282 root INFO creating build/lib.linux-armv8l-cpython-312/Bio/KEGG/KGML
2025-11-04 22:56:04,282 root INFO copying Bio/KEGG/KGML/__init__.py -> build/lib.linux-armv8l-cpython-312/Bio/KEGG/KGML
2025-11-04 22:56:04,282 root INFO copying Bio/KEGG/KGML/KGML_pathway.py -> build/lib.linux-armv8l-cpython-312/Bio/KEGG/KGML
2025-11-04 22:56:04,282 root INFO copying Bio/KEGG/KGML/KGML_parser.py -> build/lib.linux-armv8l-cpython-312/Bio/KEGG/KGML
2025-11-04 22:56:04,283 root INFO creating build/lib.linux-armv8l-cpython-312/Bio/Medline
2025-11-04 22:56:04,283 root INFO copying Bio/Medline/__init__.py -> build/lib.linux-armv8l-cpython-312/Bio/Medline
2025-11-04 22:56:04,283 root INFO creating build/lib.linux-armv8l-cpython-312/Bio/motifs
2025-11-04 22:56:04,284 root INFO copying Bio/motifs/__init__.py -> build/lib.linux-armv8l-cpython-312/Bio/motifs
2025-11-04 22:56:04,284 root INFO copying Bio/motifs/transfac.py -> build/lib.linux-armv8l-cpython-312/Bio/motifs
2025-11-04 22:56:04,284 root INFO copying Bio/motifs/alignace.py -> build/lib.linux-armv8l-cpython-312/Bio/motifs
2025-11-04 22:56:04,284 root INFO copying Bio/motifs/minimal.py -> build/lib.linux-armv8l-cpython-312/Bio/motifs
2025-11-04 22:56:04,285 root INFO copying Bio/motifs/pfm.py -> build/lib.linux-armv8l-cpython-312/Bio/motifs
2025-11-04 22:56:04,285 root INFO copying Bio/motifs/xms.py -> build/lib.linux-armv8l-cpython-312/Bio/motifs
2025-11-04 22:56:04,285 root INFO copying Bio/motifs/meme.py -> build/lib.linux-armv8l-cpython-312/Bio/motifs
2025-11-04 22:56:04,286 root INFO copying Bio/motifs/mast.py -> build/lib.linux-armv8l-cpython-312/Bio/motifs
2025-11-04 22:56:04,286 root INFO copying Bio/motifs/clusterbuster.py -> build/lib.linux-armv8l-cpython-312/Bio/motifs
2025-11-04 22:56:04,286 root INFO copying Bio/motifs/matrix.py -> build/lib.linux-armv8l-cpython-312/Bio/motifs
2025-11-04 22:56:04,286 root INFO copying Bio/motifs/thresholds.py -> build/lib.linux-armv8l-cpython-312/Bio/motifs
2025-11-04 22:56:04,287 root INFO creating build/lib.linux-armv8l-cpython-312/Bio/motifs/applications
2025-11-04 22:56:04,287 root INFO copying Bio/motifs/applications/__init__.py -> build/lib.linux-armv8l-cpython-312/Bio/motifs/applications
2025-11-04 22:56:04,287 root INFO copying Bio/motifs/applications/_xxmotif.py -> build/lib.linux-armv8l-cpython-312/Bio/motifs/applications
2025-11-04 22:56:04,288 root INFO creating build/lib.linux-armv8l-cpython-312/Bio/motifs/jaspar
2025-11-04 22:56:04,288 root INFO copying Bio/motifs/jaspar/__init__.py -> build/lib.linux-armv8l-cpython-312/Bio/motifs/jaspar
2025-11-04 22:56:04,288 root INFO copying Bio/motifs/jaspar/db.py -> build/lib.linux-armv8l-cpython-312/Bio/motifs/jaspar
2025-11-04 22:56:04,288 root INFO creating build/lib.linux-armv8l-cpython-312/Bio/Nexus
2025-11-04 22:56:04,289 root INFO copying Bio/Nexus/__init__.py -> build/lib.linux-armv8l-cpython-312/Bio/Nexus
2025-11-04 22:56:04,289 root INFO copying Bio/Nexus/StandardData.py -> build/lib.linux-armv8l-cpython-312/Bio/Nexus
2025-11-04 22:56:04,289 root INFO copying Bio/Nexus/Nexus.py -> build/lib.linux-armv8l-cpython-312/Bio/Nexus
2025-11-04 22:56:04,289 root INFO copying Bio/Nexus/Trees.py -> build/lib.linux-armv8l-cpython-312/Bio/Nexus
2025-11-04 22:56:04,290 root INFO copying Bio/Nexus/Nodes.py -> build/lib.linux-armv8l-cpython-312/Bio/Nexus
2025-11-04 22:56:04,290 root INFO creating build/lib.linux-armv8l-cpython-312/Bio/NMR
2025-11-04 22:56:04,290 root INFO copying Bio/NMR/__init__.py -> build/lib.linux-armv8l-cpython-312/Bio/NMR
2025-11-04 22:56:04,291 root INFO copying Bio/NMR/xpktools.py -> build/lib.linux-armv8l-cpython-312/Bio/NMR
2025-11-04 22:56:04,291 root INFO copying Bio/NMR/NOEtools.py -> build/lib.linux-armv8l-cpython-312/Bio/NMR
2025-11-04 22:56:04,291 root INFO creating build/lib.linux-armv8l-cpython-312/Bio/Pathway
2025-11-04 22:56:04,291 root INFO copying Bio/Pathway/__init__.py -> build/lib.linux-armv8l-cpython-312/Bio/Pathway
2025-11-04 22:56:04,292 root INFO creating build/lib.linux-armv8l-cpython-312/Bio/Pathway/Rep
2025-11-04 22:56:04,292 root INFO copying Bio/Pathway/Rep/__init__.py -> build/lib.linux-armv8l-cpython-312/Bio/Pathway/Rep
2025-11-04 22:56:04,292 root INFO copying Bio/Pathway/Rep/Graph.py -> build/lib.linux-armv8l-cpython-312/Bio/Pathway/Rep
2025-11-04 22:56:04,292 root INFO copying Bio/Pathway/Rep/MultiGraph.py -> build/lib.linux-armv8l-cpython-312/Bio/Pathway/Rep
2025-11-04 22:56:04,293 root INFO copying Bio/PDB/__init__.py -> build/lib.linux-armv8l-cpython-312/Bio/PDB
2025-11-04 22:56:04,294 root INFO copying Bio/PDB/ic_rebuild.py -> build/lib.linux-armv8l-cpython-312/Bio/PDB
2025-11-04 22:56:04,294 root INFO copying Bio/PDB/MMCIFParser.py -> build/lib.linux-armv8l-cpython-312/Bio/PDB
2025-11-04 22:56:04,294 root INFO copying Bio/PDB/qcprot.py -> build/lib.linux-armv8l-cpython-312/Bio/PDB
2025-11-04 22:56:04,294 root INFO copying Bio/PDB/Entity.py -> build/lib.linux-armv8l-cpython-312/Bio/PDB
2025-11-04 22:56:04,295 root INFO copying Bio/PDB/DSSP.py -> build/lib.linux-armv8l-cpython-312/Bio/PDB
2025-11-04 22:56:04,295 root INFO copying Bio/PDB/mmcifio.py -> build/lib.linux-armv8l-cpython-312/Bio/PDB
2025-11-04 22:56:04,295 root INFO copying Bio/PDB/Dice.py -> build/lib.linux-armv8l-cpython-312/Bio/PDB
2025-11-04 22:56:04,296 root INFO copying Bio/PDB/PDBIO.py -> build/lib.linux-armv8l-cpython-312/Bio/PDB
2025-11-04 22:56:04,296 root INFO copying Bio/PDB/StructureAlignment.py -> build/lib.linux-armv8l-cpython-312/Bio/PDB
2025-11-04 22:56:04,296 root INFO copying Bio/PDB/cealign.py -> build/lib.linux-armv8l-cpython-312/Bio/PDB
2025-11-04 22:56:04,296 root INFO copying Bio/PDB/SCADIO.py -> build/lib.linux-armv8l-cpython-312/Bio/PDB
2025-11-04 22:56:04,297 root INFO copying Bio/PDB/ic_data.py -> build/lib.linux-armv8l-cpython-312/Bio/PDB
2025-11-04 22:56:04,297 root INFO copying Bio/PDB/PDBList.py -> build/lib.linux-armv8l-cpython-312/Bio/PDB
2025-11-04 22:56:04,297 root INFO copying Bio/PDB/binary_cif.py -> build/lib.linux-armv8l-cpython-312/Bio/PDB
2025-11-04 22:56:04,298 root INFO copying Bio/PDB/NeighborSearch.py -> build/lib.linux-armv8l-cpython-312/Bio/PDB
2025-11-04 22:56:04,298 root INFO copying Bio/PDB/PDBMLParser.py -> build/lib.linux-armv8l-cpython-312/Bio/PDB
2025-11-04 22:56:04,298 root INFO copying Bio/PDB/vectors.py -> build/lib.linux-armv8l-cpython-312/Bio/PDB
2025-11-04 22:56:04,298 root INFO copying Bio/PDB/StructureBuilder.py -> build/lib.linux-armv8l-cpython-312/Bio/PDB
2025-11-04 22:56:04,299 root INFO copying Bio/PDB/SASA.py -> build/lib.linux-armv8l-cpython-312/Bio/PDB
2025-11-04 22:56:04,299 root INFO copying Bio/PDB/MMCIF2Dict.py -> build/lib.linux-armv8l-cpython-312/Bio/PDB
2025-11-04 22:56:04,299 root INFO copying Bio/PDB/internal_coords.py -> build/lib.linux-armv8l-cpython-312/Bio/PDB
2025-11-04 22:56:04,300 root INFO copying Bio/PDB/PDBParser.py -> build/lib.linux-armv8l-cpython-312/Bio/PDB
2025-11-04 22:56:04,300 root INFO copying Bio/PDB/Structure.py -> build/lib.linux-armv8l-cpython-312/Bio/PDB
2025-11-04 22:56:04,300 root INFO copying Bio/PDB/Selection.py -> build/lib.linux-armv8l-cpython-312/Bio/PDB
2025-11-04 22:56:04,301 root INFO copying Bio/PDB/PSEA.py -> build/lib.linux-armv8l-cpython-312/Bio/PDB
2025-11-04 22:56:04,301 root INFO copying Bio/PDB/alphafold_db.py -> build/lib.linux-armv8l-cpython-312/Bio/PDB
2025-11-04 22:56:04,301 root INFO copying Bio/PDB/Model.py -> build/lib.linux-armv8l-cpython-312/Bio/PDB
2025-11-04 22:56:04,301 root INFO copying Bio/PDB/PDBExceptions.py -> build/lib.linux-armv8l-cpython-312/Bio/PDB
2025-11-04 22:56:04,302 root INFO copying Bio/PDB/Polypeptide.py -> build/lib.linux-armv8l-cpython-312/Bio/PDB
2025-11-04 22:56:04,302 root INFO copying Bio/PDB/AbstractPropertyMap.py -> build/lib.linux-armv8l-cpython-312/Bio/PDB
2025-11-04 22:56:04,302 root INFO copying Bio/PDB/Atom.py -> build/lib.linux-armv8l-cpython-312/Bio/PDB
2025-11-04 22:56:04,302 root INFO copying Bio/PDB/NACCESS.py -> build/lib.linux-armv8l-cpython-312/Bio/PDB
2025-11-04 22:56:04,303 root INFO copying Bio/PDB/ResidueDepth.py -> build/lib.linux-armv8l-cpython-312/Bio/PDB
2025-11-04 22:56:04,303 root INFO copying Bio/PDB/parse_pdb_header.py -> build/lib.linux-armv8l-cpython-312/Bio/PDB
2025-11-04 22:56:04,303 root INFO copying Bio/PDB/PICIO.py -> build/lib.linux-armv8l-cpython-312/Bio/PDB
2025-11-04 22:56:04,304 root INFO copying Bio/PDB/Superimposer.py -> build/lib.linux-armv8l-cpython-312/Bio/PDB
2025-11-04 22:56:04,304 root INFO copying Bio/PDB/FragmentMapper.py -> build/lib.linux-armv8l-cpython-312/Bio/PDB
2025-11-04 22:56:04,304 root INFO copying Bio/PDB/Chain.py -> build/lib.linux-armv8l-cpython-312/Bio/PDB
2025-11-04 22:56:04,304 root INFO copying Bio/PDB/Residue.py -> build/lib.linux-armv8l-cpython-312/Bio/PDB
2025-11-04 22:56:04,305 root INFO copying Bio/PDB/HSExposure.py -> build/lib.linux-armv8l-cpython-312/Bio/PDB
2025-11-04 22:56:04,305 root INFO creating build/lib.linux-armv8l-cpython-312/Bio/phenotype
2025-11-04 22:56:04,305 root INFO copying Bio/phenotype/__init__.py -> build/lib.linux-armv8l-cpython-312/Bio/phenotype
2025-11-04 22:56:04,306 root INFO copying Bio/phenotype/phen_micro.py -> build/lib.linux-armv8l-cpython-312/Bio/phenotype
2025-11-04 22:56:04,306 root INFO copying Bio/phenotype/pm_fitting.py -> build/lib.linux-armv8l-cpython-312/Bio/phenotype
2025-11-04 22:56:04,306 root INFO creating build/lib.linux-armv8l-cpython-312/Bio/PopGen
2025-11-04 22:56:04,306 root INFO copying Bio/PopGen/__init__.py -> build/lib.linux-armv8l-cpython-312/Bio/PopGen
2025-11-04 22:56:04,307 root INFO creating build/lib.linux-armv8l-cpython-312/Bio/PopGen/GenePop
2025-11-04 22:56:04,307 root INFO copying Bio/PopGen/GenePop/__init__.py -> build/lib.linux-armv8l-cpython-312/Bio/PopGen/GenePop
2025-11-04 22:56:04,307 root INFO copying Bio/PopGen/GenePop/LargeFileParser.py -> build/lib.linux-armv8l-cpython-312/Bio/PopGen/GenePop
2025-11-04 22:56:04,308 root INFO copying Bio/PopGen/GenePop/EasyController.py -> build/lib.linux-armv8l-cpython-312/Bio/PopGen/GenePop
2025-11-04 22:56:04,308 root INFO copying Bio/PopGen/GenePop/Controller.py -> build/lib.linux-armv8l-cpython-312/Bio/PopGen/GenePop
2025-11-04 22:56:04,308 root INFO copying Bio/PopGen/GenePop/FileParser.py -> build/lib.linux-armv8l-cpython-312/Bio/PopGen/GenePop
2025-11-04 22:56:04,309 root INFO creating build/lib.linux-armv8l-cpython-312/Bio/Restriction
2025-11-04 22:56:04,309 root INFO copying Bio/Restriction/__init__.py -> build/lib.linux-armv8l-cpython-312/Bio/Restriction
2025-11-04 22:56:04,309 root INFO copying Bio/Restriction/PrintFormat.py -> build/lib.linux-armv8l-cpython-312/Bio/Restriction
2025-11-04 22:56:04,309 root INFO copying Bio/Restriction/Restriction_Dictionary.py -> build/lib.linux-armv8l-cpython-312/Bio/Restriction
2025-11-04 22:56:04,310 root INFO copying Bio/Restriction/Restriction.py -> build/lib.linux-armv8l-cpython-312/Bio/Restriction
2025-11-04 22:56:04,311 root INFO creating build/lib.linux-armv8l-cpython-312/Bio/SCOP
2025-11-04 22:56:04,311 root INFO copying Bio/SCOP/__init__.py -> build/lib.linux-armv8l-cpython-312/Bio/SCOP
2025-11-04 22:56:04,311 root INFO copying Bio/SCOP/Hie.py -> build/lib.linux-armv8l-cpython-312/Bio/SCOP
2025-11-04 22:56:04,312 root INFO copying Bio/SCOP/Raf.py -> build/lib.linux-armv8l-cpython-312/Bio/SCOP
2025-11-04 22:56:04,312 root INFO copying Bio/SCOP/Dom.py -> build/lib.linux-armv8l-cpython-312/Bio/SCOP
2025-11-04 22:56:04,312 root INFO copying Bio/SCOP/Cla.py -> build/lib.linux-armv8l-cpython-312/Bio/SCOP
2025-11-04 22:56:04,312 root INFO copying Bio/SCOP/Des.py -> build/lib.linux-armv8l-cpython-312/Bio/SCOP
2025-11-04 22:56:04,313 root INFO copying Bio/SCOP/Residues.py -> build/lib.linux-armv8l-cpython-312/Bio/SCOP
2025-11-04 22:56:04,313 root INFO creating build/lib.linux-armv8l-cpython-312/Bio/SearchIO
2025-11-04 22:56:04,313 root INFO copying Bio/SearchIO/__init__.py -> build/lib.linux-armv8l-cpython-312/Bio/SearchIO
2025-11-04 22:56:04,313 root INFO copying Bio/SearchIO/_index.py -> build/lib.linux-armv8l-cpython-312/Bio/SearchIO
2025-11-04 22:56:04,314 root INFO copying Bio/SearchIO/_utils.py -> build/lib.linux-armv8l-cpython-312/Bio/SearchIO
2025-11-04 22:56:04,314 root INFO copying Bio/SearchIO/FastaIO.py -> build/lib.linux-armv8l-cpython-312/Bio/SearchIO
2025-11-04 22:56:04,314 root INFO copying Bio/SearchIO/BlatIO.py -> build/lib.linux-armv8l-cpython-312/Bio/SearchIO
2025-11-04 22:56:04,315 root INFO creating build/lib.linux-armv8l-cpython-312/Bio/SearchIO/_model
2025-11-04 22:56:04,315 root INFO copying Bio/SearchIO/_model/__init__.py -> build/lib.linux-armv8l-cpython-312/Bio/SearchIO/_model
2025-11-04 22:56:04,315 root INFO copying Bio/SearchIO/_model/query.py -> build/lib.linux-armv8l-cpython-312/Bio/SearchIO/_model
2025-11-04 22:56:04,315 root INFO copying Bio/SearchIO/_model/hit.py -> build/lib.linux-armv8l-cpython-312/Bio/SearchIO/_model
2025-11-04 22:56:04,316 root INFO copying Bio/SearchIO/_model/hsp.py -> build/lib.linux-armv8l-cpython-312/Bio/SearchIO/_model
2025-11-04 22:56:04,316 root INFO copying Bio/SearchIO/_model/_base.py -> build/lib.linux-armv8l-cpython-312/Bio/SearchIO/_model
2025-11-04 22:56:04,316 root INFO creating build/lib.linux-armv8l-cpython-312/Bio/SearchIO/BlastIO
2025-11-04 22:56:04,317 root INFO copying Bio/SearchIO/BlastIO/__init__.py -> build/lib.linux-armv8l-cpython-312/Bio/SearchIO/BlastIO
2025-11-04 22:56:04,317 root INFO copying Bio/SearchIO/BlastIO/blast_xml.py -> build/lib.linux-armv8l-cpython-312/Bio/SearchIO/BlastIO
2025-11-04 22:56:04,317 root INFO copying Bio/SearchIO/BlastIO/blast_tab.py -> build/lib.linux-armv8l-cpython-312/Bio/SearchIO/BlastIO
2025-11-04 22:56:04,318 root INFO creating build/lib.linux-armv8l-cpython-312/Bio/SearchIO/HHsuiteIO
2025-11-04 22:56:04,318 root INFO copying Bio/SearchIO/HHsuiteIO/__init__.py -> build/lib.linux-armv8l-cpython-312/Bio/SearchIO/HHsuiteIO
2025-11-04 22:56:04,318 root INFO copying Bio/SearchIO/HHsuiteIO/hhsuite2_text.py -> build/lib.linux-armv8l-cpython-312/Bio/SearchIO/HHsuiteIO
2025-11-04 22:56:04,318 root INFO creating build/lib.linux-armv8l-cpython-312/Bio/SearchIO/HmmerIO
2025-11-04 22:56:04,319 root INFO copying Bio/SearchIO/HmmerIO/__init__.py -> build/lib.linux-armv8l-cpython-312/Bio/SearchIO/HmmerIO
2025-11-04 22:56:04,319 root INFO copying Bio/SearchIO/HmmerIO/hmmer3_tab.py -> build/lib.linux-armv8l-cpython-312/Bio/SearchIO/HmmerIO
2025-11-04 22:56:04,319 root INFO copying Bio/SearchIO/HmmerIO/hmmer2_text.py -> build/lib.linux-armv8l-cpython-312/Bio/SearchIO/HmmerIO
2025-11-04 22:56:04,320 root INFO copying Bio/SearchIO/HmmerIO/hmmer3_text.py -> build/lib.linux-armv8l-cpython-312/Bio/SearchIO/HmmerIO
2025-11-04 22:56:04,320 root INFO copying Bio/SearchIO/HmmerIO/_base.py -> build/lib.linux-armv8l-cpython-312/Bio/SearchIO/HmmerIO
2025-11-04 22:56:04,320 root INFO copying Bio/SearchIO/HmmerIO/hmmer3_domtab.py -> build/lib.linux-armv8l-cpython-312/Bio/SearchIO/HmmerIO
2025-11-04 22:56:04,320 root INFO creating build/lib.linux-armv8l-cpython-312/Bio/SearchIO/ExonerateIO
2025-11-04 22:56:04,321 root INFO copying Bio/SearchIO/ExonerateIO/__init__.py -> build/lib.linux-armv8l-cpython-312/Bio/SearchIO/ExonerateIO
2025-11-04 22:56:04,321 root INFO copying Bio/SearchIO/ExonerateIO/exonerate_vulgar.py -> build/lib.linux-armv8l-cpython-312/Bio/SearchIO/ExonerateIO
2025-11-04 22:56:04,321 root INFO copying Bio/SearchIO/ExonerateIO/exonerate_text.py -> build/lib.linux-armv8l-cpython-312/Bio/SearchIO/ExonerateIO
2025-11-04 22:56:04,322 root INFO copying Bio/SearchIO/ExonerateIO/_base.py -> build/lib.linux-armv8l-cpython-312/Bio/SearchIO/ExonerateIO
2025-11-04 22:56:04,322 root INFO copying Bio/SearchIO/ExonerateIO/exonerate_cigar.py -> build/lib.linux-armv8l-cpython-312/Bio/SearchIO/ExonerateIO
2025-11-04 22:56:04,322 root INFO creating build/lib.linux-armv8l-cpython-312/Bio/SearchIO/InterproscanIO
2025-11-04 22:56:04,322 root INFO copying Bio/SearchIO/InterproscanIO/__init__.py -> build/lib.linux-armv8l-cpython-312/Bio/SearchIO/InterproscanIO
2025-11-04 22:56:04,323 root INFO copying Bio/SearchIO/InterproscanIO/interproscan_xml.py -> build/lib.linux-armv8l-cpython-312/Bio/SearchIO/InterproscanIO
2025-11-04 22:56:04,323 root INFO creating build/lib.linux-armv8l-cpython-312/Bio/SeqIO
2025-11-04 22:56:04,323 root INFO copying Bio/SeqIO/__init__.py -> build/lib.linux-armv8l-cpython-312/Bio/SeqIO
2025-11-04 22:56:04,324 root INFO copying Bio/SeqIO/QualityIO.py -> build/lib.linux-armv8l-cpython-312/Bio/SeqIO
2025-11-04 22:56:04,324 root INFO copying Bio/SeqIO/PhdIO.py -> build/lib.linux-armv8l-cpython-312/Bio/SeqIO
2025-11-04 22:56:04,324 root INFO copying Bio/SeqIO/SffIO.py -> build/lib.linux-armv8l-cpython-312/Bio/SeqIO
2025-11-04 22:56:04,325 root INFO copying Bio/SeqIO/_index.py -> build/lib.linux-armv8l-cpython-312/Bio/SeqIO
2025-11-04 22:56:04,325 root INFO copying Bio/SeqIO/Interfaces.py -> build/lib.linux-armv8l-cpython-312/Bio/SeqIO
2025-11-04 22:56:04,325 root INFO copying Bio/SeqIO/PirIO.py -> build/lib.linux-armv8l-cpython-312/Bio/SeqIO
2025-11-04 22:56:04,326 root INFO copying Bio/SeqIO/SwissIO.py -> build/lib.linux-armv8l-cpython-312/Bio/SeqIO
2025-11-04 22:56:04,326 root INFO copying Bio/SeqIO/InsdcIO.py -> build/lib.linux-armv8l-cpython-312/Bio/SeqIO
2025-11-04 22:56:04,326 root INFO copying Bio/SeqIO/GfaIO.py -> build/lib.linux-armv8l-cpython-312/Bio/SeqIO
2025-11-04 22:56:04,326 root INFO copying Bio/SeqIO/IgIO.py -> build/lib.linux-armv8l-cpython-312/Bio/SeqIO
2025-11-04 22:56:04,327 root INFO copying Bio/SeqIO/XdnaIO.py -> build/lib.linux-armv8l-cpython-312/Bio/SeqIO
2025-11-04 22:56:04,327 root INFO copying Bio/SeqIO/AceIO.py -> build/lib.linux-armv8l-cpython-312/Bio/SeqIO
2025-11-04 22:56:04,327 root INFO copying Bio/SeqIO/AbiIO.py -> build/lib.linux-armv8l-cpython-312/Bio/SeqIO
2025-11-04 22:56:04,328 root INFO copying Bio/SeqIO/PdbIO.py -> build/lib.linux-armv8l-cpython-312/Bio/SeqIO
2025-11-04 22:56:04,328 root INFO copying Bio/SeqIO/UniprotIO.py -> build/lib.linux-armv8l-cpython-312/Bio/SeqIO
2025-11-04 22:56:04,328 root INFO copying Bio/SeqIO/SnapGeneIO.py -> build/lib.linux-armv8l-cpython-312/Bio/SeqIO
2025-11-04 22:56:04,328 root INFO copying Bio/SeqIO/TwoBitIO.py -> build/lib.linux-armv8l-cpython-312/Bio/SeqIO
2025-11-04 22:56:04,329 root INFO copying Bio/SeqIO/SeqXmlIO.py -> build/lib.linux-armv8l-cpython-312/Bio/SeqIO
2025-11-04 22:56:04,329 root INFO copying Bio/SeqIO/NibIO.py -> build/lib.linux-armv8l-cpython-312/Bio/SeqIO
2025-11-04 22:56:04,329 root INFO copying Bio/SeqIO/FastaIO.py -> build/lib.linux-armv8l-cpython-312/Bio/SeqIO
2025-11-04 22:56:04,330 root INFO copying Bio/SeqIO/GckIO.py -> build/lib.linux-armv8l-cpython-312/Bio/SeqIO
2025-11-04 22:56:04,330 root INFO copying Bio/SeqIO/TabIO.py -> build/lib.linux-armv8l-cpython-312/Bio/SeqIO
2025-11-04 22:56:04,330 root INFO creating build/lib.linux-armv8l-cpython-312/Bio/SeqUtils
2025-11-04 22:56:04,330 root INFO copying Bio/SeqUtils/__init__.py -> build/lib.linux-armv8l-cpython-312/Bio/SeqUtils
2025-11-04 22:56:04,331 root INFO copying Bio/SeqUtils/ProtParam.py -> build/lib.linux-armv8l-cpython-312/Bio/SeqUtils
2025-11-04 22:56:04,331 root INFO copying Bio/SeqUtils/CheckSum.py -> build/lib.linux-armv8l-cpython-312/Bio/SeqUtils
2025-11-04 22:56:04,331 root INFO copying Bio/SeqUtils/lcc.py -> build/lib.linux-armv8l-cpython-312/Bio/SeqUtils
2025-11-04 22:56:04,332 root INFO copying Bio/SeqUtils/MeltingTemp.py -> build/lib.linux-armv8l-cpython-312/Bio/SeqUtils
2025-11-04 22:56:04,332 root INFO copying Bio/SeqUtils/ProtParamData.py -> build/lib.linux-armv8l-cpython-312/Bio/SeqUtils
2025-11-04 22:56:04,332 root INFO copying Bio/SeqUtils/IsoelectricPoint.py -> build/lib.linux-armv8l-cpython-312/Bio/SeqUtils
2025-11-04 22:56:04,333 root INFO creating build/lib.linux-armv8l-cpython-312/Bio/Sequencing
2025-11-04 22:56:04,333 root INFO copying Bio/Sequencing/__init__.py -> build/lib.linux-armv8l-cpython-312/Bio/Sequencing
2025-11-04 22:56:04,333 root INFO copying Bio/Sequencing/Ace.py -> build/lib.linux-armv8l-cpython-312/Bio/Sequencing
2025-11-04 22:56:04,333 root INFO copying Bio/Sequencing/Phd.py -> build/lib.linux-armv8l-cpython-312/Bio/Sequencing
2025-11-04 22:56:04,334 root INFO creating build/lib.linux-armv8l-cpython-312/Bio/Sequencing/Applications
2025-11-04 22:56:04,334 root INFO copying Bio/Sequencing/Applications/__init__.py -> build/lib.linux-armv8l-cpython-312/Bio/Sequencing/Applications
2025-11-04 22:56:04,334 root INFO copying Bio/Sequencing/Applications/_samtools.py -> build/lib.linux-armv8l-cpython-312/Bio/Sequencing/Applications
2025-11-04 22:56:04,334 root INFO copying Bio/Sequencing/Applications/_Novoalign.py -> build/lib.linux-armv8l-cpython-312/Bio/Sequencing/Applications
2025-11-04 22:56:04,335 root INFO copying Bio/Sequencing/Applications/_bwa.py -> build/lib.linux-armv8l-cpython-312/Bio/Sequencing/Applications
2025-11-04 22:56:04,335 root INFO creating build/lib.linux-armv8l-cpython-312/Bio/SVDSuperimposer
2025-11-04 22:56:04,335 root INFO copying Bio/SVDSuperimposer/__init__.py -> build/lib.linux-armv8l-cpython-312/Bio/SVDSuperimposer
2025-11-04 22:56:04,336 root INFO creating build/lib.linux-armv8l-cpython-312/Bio/SwissProt
2025-11-04 22:56:04,336 root INFO copying Bio/SwissProt/__init__.py -> build/lib.linux-armv8l-cpython-312/Bio/SwissProt
2025-11-04 22:56:04,336 root INFO copying Bio/SwissProt/KeyWList.py -> build/lib.linux-armv8l-cpython-312/Bio/SwissProt
2025-11-04 22:56:04,337 root INFO creating build/lib.linux-armv8l-cpython-312/Bio/TogoWS
2025-11-04 22:56:04,337 root INFO copying Bio/TogoWS/__init__.py -> build/lib.linux-armv8l-cpython-312/Bio/TogoWS
2025-11-04 22:56:04,337 root INFO creating build/lib.linux-armv8l-cpython-312/Bio/Phylo
2025-11-04 22:56:04,337 root INFO copying Bio/Phylo/__init__.py -> build/lib.linux-armv8l-cpython-312/Bio/Phylo
2025-11-04 22:56:04,338 root INFO copying Bio/Phylo/_cdao_owl.py -> build/lib.linux-armv8l-cpython-312/Bio/Phylo
2025-11-04 22:56:04,338 root INFO copying Bio/Phylo/TreeConstruction.py -> build/lib.linux-armv8l-cpython-312/Bio/Phylo
2025-11-04 22:56:04,338 root INFO copying Bio/Phylo/Newick.py -> build/lib.linux-armv8l-cpython-312/Bio/Phylo
2025-11-04 22:56:04,339 root INFO copying Bio/Phylo/Consensus.py -> build/lib.linux-armv8l-cpython-312/Bio/Phylo
2025-11-04 22:56:04,339 root INFO copying Bio/Phylo/NeXML.py -> build/lib.linux-armv8l-cpython-312/Bio/Phylo
2025-11-04 22:56:04,339 root INFO copying Bio/Phylo/PhyloXMLIO.py -> build/lib.linux-armv8l-cpython-312/Bio/Phylo
2025-11-04 22:56:04,340 root INFO copying Bio/Phylo/BaseTree.py -> build/lib.linux-armv8l-cpython-312/Bio/Phylo
2025-11-04 22:56:04,340 root INFO copying Bio/Phylo/_utils.py -> build/lib.linux-armv8l-cpython-312/Bio/Phylo
2025-11-04 22:56:04,340 root INFO copying Bio/Phylo/_io.py -> build/lib.linux-armv8l-cpython-312/Bio/Phylo
2025-11-04 22:56:04,340 root INFO copying Bio/Phylo/NewickIO.py -> build/lib.linux-armv8l-cpython-312/Bio/Phylo
2025-11-04 22:56:04,341 root INFO copying Bio/Phylo/CDAOIO.py -> build/lib.linux-armv8l-cpython-312/Bio/Phylo
2025-11-04 22:56:04,341 root INFO copying Bio/Phylo/NeXMLIO.py -> build/lib.linux-armv8l-cpython-312/Bio/Phylo
2025-11-04 22:56:04,341 root INFO copying Bio/Phylo/CDAO.py -> build/lib.linux-armv8l-cpython-312/Bio/Phylo
2025-11-04 22:56:04,342 root INFO copying Bio/Phylo/PhyloXML.py -> build/lib.linux-armv8l-cpython-312/Bio/Phylo
2025-11-04 22:56:04,342 root INFO copying Bio/Phylo/NexusIO.py -> build/lib.linux-armv8l-cpython-312/Bio/Phylo
2025-11-04 22:56:04,342 root INFO creating build/lib.linux-armv8l-cpython-312/Bio/Phylo/Applications
2025-11-04 22:56:04,342 root INFO copying Bio/Phylo/Applications/__init__.py -> build/lib.linux-armv8l-cpython-312/Bio/Phylo/Applications
2025-11-04 22:56:04,343 root INFO copying Bio/Phylo/Applications/_Phyml.py -> build/lib.linux-armv8l-cpython-312/Bio/Phylo/Applications
2025-11-04 22:56:04,343 root INFO copying Bio/Phylo/Applications/_Raxml.py -> build/lib.linux-armv8l-cpython-312/Bio/Phylo/Applications
2025-11-04 22:56:04,343 root INFO copying Bio/Phylo/Applications/_Fasttree.py -> build/lib.linux-armv8l-cpython-312/Bio/Phylo/Applications
2025-11-04 22:56:04,344 root INFO creating build/lib.linux-armv8l-cpython-312/Bio/Phylo/PAML
2025-11-04 22:56:04,344 root INFO copying Bio/Phylo/PAML/__init__.py -> build/lib.linux-armv8l-cpython-312/Bio/Phylo/PAML
2025-11-04 22:56:04,344 root INFO copying Bio/Phylo/PAML/codeml.py -> build/lib.linux-armv8l-cpython-312/Bio/Phylo/PAML
2025-11-04 22:56:04,345 root INFO copying Bio/Phylo/PAML/baseml.py -> build/lib.linux-armv8l-cpython-312/Bio/Phylo/PAML
2025-11-04 22:56:04,345 root INFO copying Bio/Phylo/PAML/_parse_codeml.py -> build/lib.linux-armv8l-cpython-312/Bio/Phylo/PAML
2025-11-04 22:56:04,345 root INFO copying Bio/Phylo/PAML/_parse_yn00.py -> build/lib.linux-armv8l-cpython-312/Bio/Phylo/PAML
2025-11-04 22:56:04,346 root INFO copying Bio/Phylo/PAML/_paml.py -> build/lib.linux-armv8l-cpython-312/Bio/Phylo/PAML
2025-11-04 22:56:04,346 root INFO copying Bio/Phylo/PAML/_parse_baseml.py -> build/lib.linux-armv8l-cpython-312/Bio/Phylo/PAML
2025-11-04 22:56:04,346 root INFO copying Bio/Phylo/PAML/yn00.py -> build/lib.linux-armv8l-cpython-312/Bio/Phylo/PAML
2025-11-04 22:56:04,346 root INFO copying Bio/Phylo/PAML/chi2.py -> build/lib.linux-armv8l-cpython-312/Bio/Phylo/PAML
2025-11-04 22:56:04,347 root INFO creating build/lib.linux-armv8l-cpython-312/Bio/UniGene
2025-11-04 22:56:04,347 root INFO copying Bio/UniGene/__init__.py -> build/lib.linux-armv8l-cpython-312/Bio/UniGene
2025-11-04 22:56:04,347 root INFO creating build/lib.linux-armv8l-cpython-312/Bio/UniProt
2025-11-04 22:56:04,347 root INFO copying Bio/UniProt/__init__.py -> build/lib.linux-armv8l-cpython-312/Bio/UniProt
2025-11-04 22:56:04,348 root INFO copying Bio/UniProt/GOA.py -> build/lib.linux-armv8l-cpython-312/Bio/UniProt
2025-11-04 22:56:04,348 root INFO creating build/lib.linux-armv8l-cpython-312/BioSQL
2025-11-04 22:56:04,348 root INFO copying BioSQL/__init__.py -> build/lib.linux-armv8l-cpython-312/BioSQL
2025-11-04 22:56:04,349 root INFO copying BioSQL/BioSeqDatabase.py -> build/lib.linux-armv8l-cpython-312/BioSQL
2025-11-04 22:56:04,349 root INFO copying BioSQL/Loader.py -> build/lib.linux-armv8l-cpython-312/BioSQL
2025-11-04 22:56:04,349 root INFO copying BioSQL/BioSeq.py -> build/lib.linux-armv8l-cpython-312/BioSQL
2025-11-04 22:56:04,349 root INFO copying BioSQL/DBUtils.py -> build/lib.linux-armv8l-cpython-312/BioSQL
2025-11-04 22:56:04,350 root INFO running egg_info
2025-11-04 22:56:04,353 root INFO writing biopython.egg-info/PKG-INFO
2025-11-04 22:56:04,353 root INFO writing dependency_links to biopython.egg-info/dependency_links.txt
2025-11-04 22:56:04,354 root INFO writing requirements to biopython.egg-info/requires.txt
2025-11-04 22:56:04,354 root INFO writing top-level names to biopython.egg-info/top_level.txt
2025-11-04 22:56:04,370 root INFO reading manifest file 'biopython.egg-info/SOURCES.txt'
2025-11-04 22:56:04,418 root INFO reading manifest template 'MANIFEST.in'
2025-11-04 22:56:04,498 root WARNING warning: no previously-included files found matching 'Doc/_build'
2025-11-04 22:56:04,504 root WARNING warning: no previously-included files found matching 'Tests/Gck/DGVC_GCK.zip'
2025-11-04 22:56:04,507 root WARNING warning: no previously-included files matching '*.pyc' found anywhere in distribution
2025-11-04 22:56:04,510 root WARNING warning: no previously-included files matching '*.pyo' found anywhere in distribution
2025-11-04 22:56:04,513 root WARNING warning: no previously-included files matching '*.py{}' found anywhere in distribution
2025-11-04 22:56:04,516 root WARNING warning: no previously-included files matching '*.py-e' found anywhere in distribution
2025-11-04 22:56:04,522 root WARNING warning: no previously-included files found matching 'Bio/Align/substitution_matrices/data/README.txt'
2025-11-04 22:56:04,522 root INFO adding license file 'LICENSE'
2025-11-04 22:56:04,522 root INFO adding license file 'LICENSE.rst'
2025-11-04 22:56:04,563 root INFO writing manifest file 'biopython.egg-info/SOURCES.txt'
/usr/lib/python3.12/site-packages/setuptools/command/build_py.py:212: _Warning: Package 'Bio.Align.substitution_matrices.data' is absent from the `packages` configuration.
!!

        ********************************************************************************
        ############################
        # Package would be ignored #
        ############################
        Python recognizes 'Bio.Align.substitution_matrices.data' as an importable package[^1],
        but it is absent from setuptools' `packages` configuration.

        This leads to an ambiguous overall configuration. If you want to distribute this
        package, please make sure that 'Bio.Align.substitution_matrices.data' is explicitly added
        to the `packages` configuration field.

        Alternatively, you can also rely on setuptools' discovery methods
        (for example by using `find_namespace_packages(...)`/`find_namespace:`
        instead of `find_packages(...)`/`find:`).

        You can read more about "package discovery" on setuptools documentation page:

        - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

        If you don't want 'Bio.Align.substitution_matrices.data' to be distributed and are
        already explicitly excluding 'Bio.Align.substitution_matrices.data' via
        `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
        you can try to use `exclude_package_data`, or `include-package-data=False` in
        combination with a more fine grained `package-data` configuration.

        You can read more about "package data files" on setuptools documentation page:

        - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


        [^1]: For Python, any directory (with suitable naming) can be imported,
              even if it does not contain any `.py` files.
              On the other hand, currently there is no concept of package data
              directory, all directories are treated like packages.
        ********************************************************************************

!!
  check.warn(importable)
/usr/lib/python3.12/site-packages/setuptools/command/build_py.py:212: _Warning: Package 'Bio.Entrez.DTDs' is absent from the `packages` configuration.
!!

        ********************************************************************************
        ############################
        # Package would be ignored #
        ############################
        Python recognizes 'Bio.Entrez.DTDs' as an importable package[^1],
        but it is absent from setuptools' `packages` configuration.

        This leads to an ambiguous overall configuration. If you want to distribute this
        package, please make sure that 'Bio.Entrez.DTDs' is explicitly added
        to the `packages` configuration field.

        Alternatively, you can also rely on setuptools' discovery methods
        (for example by using `find_namespace_packages(...)`/`find_namespace:`
        instead of `find_packages(...)`/`find:`).

        You can read more about "package discovery" on setuptools documentation page:

        - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

        If you don't want 'Bio.Entrez.DTDs' to be distributed and are
        already explicitly excluding 'Bio.Entrez.DTDs' via
        `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
        you can try to use `exclude_package_data`, or `include-package-data=False` in
        combination with a more fine grained `package-data` configuration.

        You can read more about "package data files" on setuptools documentation page:

        - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


        [^1]: For Python, any directory (with suitable naming) can be imported,
              even if it does not contain any `.py` files.
              On the other hand, currently there is no concept of package data
              directory, all directories are treated like packages.
        ********************************************************************************

!!
  check.warn(importable)
/usr/lib/python3.12/site-packages/setuptools/command/build_py.py:212: _Warning: Package 'Bio.Entrez.XSDs' is absent from the `packages` configuration.
!!

        ********************************************************************************
        ############################
        # Package would be ignored #
        ############################
        Python recognizes 'Bio.Entrez.XSDs' as an importable package[^1],
        but it is absent from setuptools' `packages` configuration.

        This leads to an ambiguous overall configuration. If you want to distribute this
        package, please make sure that 'Bio.Entrez.XSDs' is explicitly added
        to the `packages` configuration field.

        Alternatively, you can also rely on setuptools' discovery methods
        (for example by using `find_namespace_packages(...)`/`find_namespace:`
        instead of `find_packages(...)`/`find:`).

        You can read more about "package discovery" on setuptools documentation page:

        - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

        If you don't want 'Bio.Entrez.XSDs' to be distributed and are
        already explicitly excluding 'Bio.Entrez.XSDs' via
        `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
        you can try to use `exclude_package_data`, or `include-package-data=False` in
        combination with a more fine grained `package-data` configuration.

        You can read more about "package data files" on setuptools documentation page:

        - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


        [^1]: For Python, any directory (with suitable naming) can be imported,
              even if it does not contain any `.py` files.
              On the other hand, currently there is no concept of package data
              directory, all directories are treated like packages.
        ********************************************************************************

!!
  check.warn(importable)
2025-11-04 22:56:04,598 root INFO copying Bio/cpairwise2module.c -> build/lib.linux-armv8l-cpython-312/Bio
2025-11-04 22:56:04,598 root INFO copying Bio/py.typed -> build/lib.linux-armv8l-cpython-312/Bio
2025-11-04 22:56:04,598 root INFO copying Bio/Align/_aligncore.c -> build/lib.linux-armv8l-cpython-312/Bio/Align
2025-11-04 22:56:04,599 root INFO copying Bio/Align/_codonaligner.c -> build/lib.linux-armv8l-cpython-312/Bio/Align
2025-11-04 22:56:04,599 root INFO copying Bio/Align/_pairwisealigner.c -> build/lib.linux-armv8l-cpython-312/Bio/Align
2025-11-04 22:56:04,600 root INFO creating build/lib.linux-armv8l-cpython-312/Bio/Align/substitution_matrices/data
2025-11-04 22:56:04,600 root INFO copying Bio/Align/substitution_matrices/data/BENNER22 -> build/lib.linux-armv8l-cpython-312/Bio/Align/substitution_matrices/data
2025-11-04 22:56:04,600 root INFO copying Bio/Align/substitution_matrices/data/BENNER6 -> build/lib.linux-armv8l-cpython-312/Bio/Align/substitution_matrices/data
2025-11-04 22:56:04,600 root INFO copying Bio/Align/substitution_matrices/data/BENNER74 -> build/lib.linux-armv8l-cpython-312/Bio/Align/substitution_matrices/data
2025-11-04 22:56:04,601 root INFO copying Bio/Align/substitution_matrices/data/BLASTN -> build/lib.linux-armv8l-cpython-312/Bio/Align/substitution_matrices/data
2025-11-04 22:56:04,601 root INFO copying Bio/Align/substitution_matrices/data/BLASTP -> build/lib.linux-armv8l-cpython-312/Bio/Align/substitution_matrices/data
2025-11-04 22:56:04,601 root INFO copying Bio/Align/substitution_matrices/data/BLOSUM45 -> build/lib.linux-armv8l-cpython-312/Bio/Align/substitution_matrices/data
2025-11-04 22:56:04,602 root INFO copying Bio/Align/substitution_matrices/data/BLOSUM50 -> build/lib.linux-armv8l-cpython-312/Bio/Align/substitution_matrices/data
2025-11-04 22:56:04,602 root INFO copying Bio/Align/substitution_matrices/data/BLOSUM62 -> build/lib.linux-armv8l-cpython-312/Bio/Align/substitution_matrices/data
2025-11-04 22:56:04,602 root INFO copying Bio/Align/substitution_matrices/data/BLOSUM80 -> build/lib.linux-armv8l-cpython-312/Bio/Align/substitution_matrices/data
2025-11-04 22:56:04,602 root INFO copying Bio/Align/substitution_matrices/data/BLOSUM90 -> build/lib.linux-armv8l-cpython-312/Bio/Align/substitution_matrices/data
2025-11-04 22:56:04,603 root INFO copying Bio/Align/substitution_matrices/data/DAYHOFF -> build/lib.linux-armv8l-cpython-312/Bio/Align/substitution_matrices/data
2025-11-04 22:56:04,603 root INFO copying Bio/Align/substitution_matrices/data/FENG -> build/lib.linux-armv8l-cpython-312/Bio/Align/substitution_matrices/data
2025-11-04 22:56:04,603 root INFO copying Bio/Align/substitution_matrices/data/GENETIC -> build/lib.linux-armv8l-cpython-312/Bio/Align/substitution_matrices/data
2025-11-04 22:56:04,604 root INFO copying Bio/Align/substitution_matrices/data/GONNET1992 -> build/lib.linux-armv8l-cpython-312/Bio/Align/substitution_matrices/data
2025-11-04 22:56:04,604 root INFO copying Bio/Align/substitution_matrices/data/HOXD70 -> build/lib.linux-armv8l-cpython-312/Bio/Align/substitution_matrices/data
2025-11-04 22:56:04,604 root INFO copying Bio/Align/substitution_matrices/data/JOHNSON -> build/lib.linux-armv8l-cpython-312/Bio/Align/substitution_matrices/data
2025-11-04 22:56:04,604 root INFO copying Bio/Align/substitution_matrices/data/JONES -> build/lib.linux-armv8l-cpython-312/Bio/Align/substitution_matrices/data
2025-11-04 22:56:04,605 root INFO copying Bio/Align/substitution_matrices/data/LEVIN -> build/lib.linux-armv8l-cpython-312/Bio/Align/substitution_matrices/data
2025-11-04 22:56:04,605 root INFO copying Bio/Align/substitution_matrices/data/MCLACHLAN -> build/lib.linux-armv8l-cpython-312/Bio/Align/substitution_matrices/data
2025-11-04 22:56:04,605 root INFO copying Bio/Align/substitution_matrices/data/MDM78 -> build/lib.linux-armv8l-cpython-312/Bio/Align/substitution_matrices/data
2025-11-04 22:56:04,605 root INFO copying Bio/Align/substitution_matrices/data/MEGABLAST -> build/lib.linux-armv8l-cpython-312/Bio/Align/substitution_matrices/data
2025-11-04 22:56:04,606 root INFO copying Bio/Align/substitution_matrices/data/NUC.4.4 -> build/lib.linux-armv8l-cpython-312/Bio/Align/substitution_matrices/data
2025-11-04 22:56:04,606 root INFO copying Bio/Align/substitution_matrices/data/PAM250 -> build/lib.linux-armv8l-cpython-312/Bio/Align/substitution_matrices/data
2025-11-04 22:56:04,606 root INFO copying Bio/Align/substitution_matrices/data/PAM30 -> build/lib.linux-armv8l-cpython-312/Bio/Align/substitution_matrices/data
2025-11-04 22:56:04,607 root INFO copying Bio/Align/substitution_matrices/data/PAM70 -> build/lib.linux-armv8l-cpython-312/Bio/Align/substitution_matrices/data
2025-11-04 22:56:04,607 root INFO copying Bio/Align/substitution_matrices/data/RAO -> build/lib.linux-armv8l-cpython-312/Bio/Align/substitution_matrices/data
2025-11-04 22:56:04,607 root INFO copying Bio/Align/substitution_matrices/data/RISLER -> build/lib.linux-armv8l-cpython-312/Bio/Align/substitution_matrices/data
2025-11-04 22:56:04,607 root INFO copying Bio/Align/substitution_matrices/data/SCHNEIDER -> build/lib.linux-armv8l-cpython-312/Bio/Align/substitution_matrices/data
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2025-11-04 22:56:04,608 root INFO copying Bio/Align/substitution_matrices/data/TRANS -> build/lib.linux-armv8l-cpython-312/Bio/Align/substitution_matrices/data
2025-11-04 22:56:04,608 root INFO copying Bio/Cluster/cluster.c -> build/lib.linux-armv8l-cpython-312/Bio/Cluster
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2025-11-04 22:56:04,609 root INFO creating build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs
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2025-11-04 22:56:04,689 root INFO copying Bio/Entrez/DTDs/pubmed_100101.dtd -> build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs
2025-11-04 22:56:04,689 root INFO copying Bio/Entrez/DTDs/pubmed_100301.dtd -> build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs
2025-11-04 22:56:04,690 root INFO copying Bio/Entrez/DTDs/pubmed_110101.dtd -> build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs
2025-11-04 22:56:04,690 root INFO copying Bio/Entrez/DTDs/pubmed_120101.dtd -> build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs
2025-11-04 22:56:04,690 root INFO copying Bio/Entrez/DTDs/pubmed_130101.dtd -> build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs
2025-11-04 22:56:04,691 root INFO copying Bio/Entrez/DTDs/pubmed_130501.dtd -> build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs
2025-11-04 22:56:04,691 root INFO copying Bio/Entrez/DTDs/pubmed_140101.dtd -> build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs
2025-11-04 22:56:04,691 root INFO copying Bio/Entrez/DTDs/pubmed_150101.dtd -> build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs
2025-11-04 22:56:04,691 root INFO copying Bio/Entrez/DTDs/pubmed_180101.dtd -> build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs
2025-11-04 22:56:04,692 root INFO copying Bio/Entrez/DTDs/pubmed_180601.dtd -> build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs
2025-11-04 22:56:04,692 root INFO copying Bio/Entrez/DTDs/pubmed_190101.dtd -> build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs
2025-11-04 22:56:04,692 root INFO copying Bio/Entrez/DTDs/references.ent -> build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs
2025-11-04 22:56:04,693 root INFO copying Bio/Entrez/DTDs/section.ent -> build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs
2025-11-04 22:56:04,693 root INFO copying Bio/Entrez/DTDs/taxon.dtd -> build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs
2025-11-04 22:56:04,693 root INFO copying Bio/Entrez/DTDs/xhtml-inlstyle-1.mod -> build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs
2025-11-04 22:56:04,694 root INFO copying Bio/Entrez/DTDs/xhtml-table-1.mod -> build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs
2025-11-04 22:56:04,694 root INFO copying Bio/Entrez/DTDs/xmlspecchars.ent -> build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs
2025-11-04 22:56:04,694 root INFO creating build/lib.linux-armv8l-cpython-312/Bio/Entrez/XSDs
2025-11-04 22:56:04,694 root INFO copying Bio/Entrez/XSDs/IPGReportSet.xsd -> build/lib.linux-armv8l-cpython-312/Bio/Entrez/XSDs
2025-11-04 22:56:04,695 root INFO copying Bio/Entrez/XSDs/NCBI_BlastOutput2.mod.xsd -> build/lib.linux-armv8l-cpython-312/Bio/Entrez/XSDs
2025-11-04 22:56:04,695 root INFO copying Bio/Entrez/XSDs/NCBI_BlastOutput2.xsd -> build/lib.linux-armv8l-cpython-312/Bio/Entrez/XSDs
2025-11-04 22:56:04,695 root INFO copying Bio/motifs/_pwm.c -> build/lib.linux-armv8l-cpython-312/Bio/motifs
2025-11-04 22:56:04,695 root INFO copying Bio/Nexus/cnexus.c -> build/lib.linux-armv8l-cpython-312/Bio/Nexus
2025-11-04 22:56:04,696 root INFO copying Bio/PDB/bcifhelpermodule.c -> build/lib.linux-armv8l-cpython-312/Bio/PDB
2025-11-04 22:56:04,696 root INFO copying Bio/PDB/ccealignmodule.c -> build/lib.linux-armv8l-cpython-312/Bio/PDB
2025-11-04 22:56:04,696 root INFO copying Bio/PDB/kdtrees.c -> build/lib.linux-armv8l-cpython-312/Bio/PDB
2025-11-04 22:56:04,697 root INFO copying Bio/SeqIO/_twoBitIO.c -> build/lib.linux-armv8l-cpython-312/Bio/SeqIO
2025-11-04 22:56:04,697 root INFO copying BioSQL/py.typed -> build/lib.linux-armv8l-cpython-312/BioSQL
2025-11-04 22:56:04,704 root INFO running build_ext
2025-11-04 22:56:04,706 root INFO building 'Bio.Align._codonaligner' extension
2025-11-04 22:56:04,706 root INFO creating build/temp.linux-armv8l-cpython-312/Bio/Align
2025-11-04 22:56:04,707 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.12 -c Bio/Align/_codonaligner.c -o build/temp.linux-armv8l-cpython-312/Bio/Align/_codonaligner.o
2025-11-04 22:56:05,224 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-armv8l-cpython-312/Bio/Align/_codonaligner.o -L/usr/lib -o build/lib.linux-armv8l-cpython-312/Bio/Align/_codonaligner.cpython-312-arm-linux-musleabihf.so
2025-11-04 22:56:05,235 root INFO building 'Bio.Align._pairwisealigner' extension
2025-11-04 22:56:05,235 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.12 -c Bio/Align/_pairwisealigner.c -o build/temp.linux-armv8l-cpython-312/Bio/Align/_pairwisealigner.o
2025-11-04 22:56:12,059 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-armv8l-cpython-312/Bio/Align/_pairwisealigner.o -L/usr/lib -o build/lib.linux-armv8l-cpython-312/Bio/Align/_pairwisealigner.cpython-312-arm-linux-musleabihf.so
2025-11-04 22:56:12,071 root INFO building 'Bio.Align._aligncore' extension
2025-11-04 22:56:12,071 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.12 -c Bio/Align/_aligncore.c -o build/temp.linux-armv8l-cpython-312/Bio/Align/_aligncore.o
2025-11-04 22:56:12,324 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-armv8l-cpython-312/Bio/Align/_aligncore.o -L/usr/lib -o build/lib.linux-armv8l-cpython-312/Bio/Align/_aligncore.cpython-312-arm-linux-musleabihf.so
2025-11-04 22:56:12,334 root INFO building 'Bio.cpairwise2' extension
2025-11-04 22:56:12,334 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.12 -c Bio/cpairwise2module.c -o build/temp.linux-armv8l-cpython-312/Bio/cpairwise2module.o
2025-11-04 22:56:12,641 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-armv8l-cpython-312/Bio/cpairwise2module.o -L/usr/lib -o build/lib.linux-armv8l-cpython-312/Bio/cpairwise2.cpython-312-arm-linux-musleabihf.so
2025-11-04 22:56:12,652 root INFO building 'Bio.Nexus.cnexus' extension
2025-11-04 22:56:12,652 root INFO creating build/temp.linux-armv8l-cpython-312/Bio/Nexus
2025-11-04 22:56:12,652 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.12 -c Bio/Nexus/cnexus.c -o build/temp.linux-armv8l-cpython-312/Bio/Nexus/cnexus.o
2025-11-04 22:56:12,787 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-armv8l-cpython-312/Bio/Nexus/cnexus.o -L/usr/lib -o build/lib.linux-armv8l-cpython-312/Bio/Nexus/cnexus.cpython-312-arm-linux-musleabihf.so
2025-11-04 22:56:12,797 root INFO building 'Bio.motifs._pwm' extension
2025-11-04 22:56:12,798 root INFO creating build/temp.linux-armv8l-cpython-312/Bio/motifs
2025-11-04 22:56:12,798 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.12 -c Bio/motifs/_pwm.c -o build/temp.linux-armv8l-cpython-312/Bio/motifs/_pwm.o
2025-11-04 22:56:12,951 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-armv8l-cpython-312/Bio/motifs/_pwm.o -L/usr/lib -o build/lib.linux-armv8l-cpython-312/Bio/motifs/_pwm.cpython-312-arm-linux-musleabihf.so
2025-11-04 22:56:12,961 root INFO building 'Bio.Cluster._cluster' extension
2025-11-04 22:56:12,961 root INFO creating build/temp.linux-armv8l-cpython-312/Bio/Cluster
2025-11-04 22:56:12,961 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.12 -c Bio/Cluster/cluster.c -o build/temp.linux-armv8l-cpython-312/Bio/Cluster/cluster.o -DCLUSTER_USE_PYTHON_MEMORY
2025-11-04 22:56:15,117 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.12 -c Bio/Cluster/clustermodule.c -o build/temp.linux-armv8l-cpython-312/Bio/Cluster/clustermodule.o -DCLUSTER_USE_PYTHON_MEMORY
2025-11-04 22:56:15,799 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-armv8l-cpython-312/Bio/Cluster/cluster.o build/temp.linux-armv8l-cpython-312/Bio/Cluster/clustermodule.o -L/usr/lib -o build/lib.linux-armv8l-cpython-312/Bio/Cluster/_cluster.cpython-312-arm-linux-musleabihf.so
2025-11-04 22:56:15,811 root INFO building 'Bio.PDB.ccealign' extension
2025-11-04 22:56:15,811 root INFO creating build/temp.linux-armv8l-cpython-312/Bio/PDB
2025-11-04 22:56:15,812 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.12 -c Bio/PDB/ccealignmodule.c -o build/temp.linux-armv8l-cpython-312/Bio/PDB/ccealignmodule.o
2025-11-04 22:56:16,134 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-armv8l-cpython-312/Bio/PDB/ccealignmodule.o -L/usr/lib -o build/lib.linux-armv8l-cpython-312/Bio/PDB/ccealign.cpython-312-arm-linux-musleabihf.so
2025-11-04 22:56:16,145 root INFO building 'Bio.PDB.kdtrees' extension
2025-11-04 22:56:16,145 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.12 -c Bio/PDB/kdtrees.c -o build/temp.linux-armv8l-cpython-312/Bio/PDB/kdtrees.o
2025-11-04 22:56:16,565 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-armv8l-cpython-312/Bio/PDB/kdtrees.o -L/usr/lib -o build/lib.linux-armv8l-cpython-312/Bio/PDB/kdtrees.cpython-312-arm-linux-musleabihf.so
2025-11-04 22:56:16,575 root INFO building 'Bio.PDB._bcif_helper' extension
2025-11-04 22:56:16,575 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.12 -c Bio/PDB/bcifhelpermodule.c -o build/temp.linux-armv8l-cpython-312/Bio/PDB/bcifhelpermodule.o
2025-11-04 22:56:16,745 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-armv8l-cpython-312/Bio/PDB/bcifhelpermodule.o -L/usr/lib -o build/lib.linux-armv8l-cpython-312/Bio/PDB/_bcif_helper.cpython-312-arm-linux-musleabihf.so
2025-11-04 22:56:16,755 root INFO building 'Bio.SeqIO._twoBitIO' extension
2025-11-04 22:56:16,755 root INFO creating build/temp.linux-armv8l-cpython-312/Bio/SeqIO
2025-11-04 22:56:16,755 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.12 -c Bio/SeqIO/_twoBitIO.c -o build/temp.linux-armv8l-cpython-312/Bio/SeqIO/_twoBitIO.o
2025-11-04 22:56:16,957 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-armv8l-cpython-312/Bio/SeqIO/_twoBitIO.o -L/usr/lib -o build/lib.linux-armv8l-cpython-312/Bio/SeqIO/_twoBitIO.cpython-312-arm-linux-musleabihf.so
2025-11-04 22:56:16,974 root INFO installing to build/bdist.linux-armv8l/wheel
2025-11-04 22:56:16,974 root INFO running install
2025-11-04 22:56:16,985 root INFO running install_lib
2025-11-04 22:56:16,989 root INFO creating build/bdist.linux-armv8l/wheel
2025-11-04 22:56:16,989 root INFO creating build/bdist.linux-armv8l/wheel/BioSQL
2025-11-04 22:56:16,989 root INFO copying build/lib.linux-armv8l-cpython-312/BioSQL/__init__.py -> build/bdist.linux-armv8l/wheel/./BioSQL
2025-11-04 22:56:16,990 root INFO copying build/lib.linux-armv8l-cpython-312/BioSQL/BioSeqDatabase.py -> build/bdist.linux-armv8l/wheel/./BioSQL
2025-11-04 22:56:16,990 root INFO copying build/lib.linux-armv8l-cpython-312/BioSQL/py.typed -> build/bdist.linux-armv8l/wheel/./BioSQL
2025-11-04 22:56:16,990 root INFO copying build/lib.linux-armv8l-cpython-312/BioSQL/Loader.py -> build/bdist.linux-armv8l/wheel/./BioSQL
2025-11-04 22:56:16,990 root INFO copying build/lib.linux-armv8l-cpython-312/BioSQL/BioSeq.py -> build/bdist.linux-armv8l/wheel/./BioSQL
2025-11-04 22:56:16,991 root INFO copying build/lib.linux-armv8l-cpython-312/BioSQL/DBUtils.py -> build/bdist.linux-armv8l/wheel/./BioSQL
2025-11-04 22:56:16,991 root INFO creating build/bdist.linux-armv8l/wheel/Bio
2025-11-04 22:56:16,991 root INFO creating build/bdist.linux-armv8l/wheel/Bio/HMM
2025-11-04 22:56:16,992 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/HMM/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/HMM
2025-11-04 22:56:16,992 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/HMM/MarkovModel.py -> build/bdist.linux-armv8l/wheel/./Bio/HMM
2025-11-04 22:56:16,992 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/HMM/Utilities.py -> build/bdist.linux-armv8l/wheel/./Bio/HMM
2025-11-04 22:56:16,992 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/HMM/Trainer.py -> build/bdist.linux-armv8l/wheel/./Bio/HMM
2025-11-04 22:56:16,992 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/HMM/DynamicProgramming.py -> build/bdist.linux-armv8l/wheel/./Bio/HMM
2025-11-04 22:56:16,993 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio
2025-11-04 22:56:16,993 root INFO creating build/bdist.linux-armv8l/wheel/Bio/Phylo
2025-11-04 22:56:16,993 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Phylo/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/Phylo
2025-11-04 22:56:16,994 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Phylo/_cdao_owl.py -> build/bdist.linux-armv8l/wheel/./Bio/Phylo
2025-11-04 22:56:16,994 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Phylo/TreeConstruction.py -> build/bdist.linux-armv8l/wheel/./Bio/Phylo
2025-11-04 22:56:16,994 root INFO creating build/bdist.linux-armv8l/wheel/Bio/Phylo/Applications
2025-11-04 22:56:16,995 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Phylo/Applications/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/Phylo/Applications
2025-11-04 22:56:16,995 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Phylo/Applications/_Phyml.py -> build/bdist.linux-armv8l/wheel/./Bio/Phylo/Applications
2025-11-04 22:56:16,995 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Phylo/Applications/_Raxml.py -> build/bdist.linux-armv8l/wheel/./Bio/Phylo/Applications
2025-11-04 22:56:16,995 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Phylo/Applications/_Fasttree.py -> build/bdist.linux-armv8l/wheel/./Bio/Phylo/Applications
2025-11-04 22:56:16,996 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Phylo/Newick.py -> build/bdist.linux-armv8l/wheel/./Bio/Phylo
2025-11-04 22:56:16,996 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Phylo/Consensus.py -> build/bdist.linux-armv8l/wheel/./Bio/Phylo
2025-11-04 22:56:16,996 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Phylo/NeXML.py -> build/bdist.linux-armv8l/wheel/./Bio/Phylo
2025-11-04 22:56:16,996 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Phylo/PhyloXMLIO.py -> build/bdist.linux-armv8l/wheel/./Bio/Phylo
2025-11-04 22:56:16,997 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Phylo/BaseTree.py -> build/bdist.linux-armv8l/wheel/./Bio/Phylo
2025-11-04 22:56:16,997 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Phylo/_utils.py -> build/bdist.linux-armv8l/wheel/./Bio/Phylo
2025-11-04 22:56:16,997 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Phylo/_io.py -> build/bdist.linux-armv8l/wheel/./Bio/Phylo
2025-11-04 22:56:16,997 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Phylo/NewickIO.py -> build/bdist.linux-armv8l/wheel/./Bio/Phylo
2025-11-04 22:56:16,998 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Phylo/CDAOIO.py -> build/bdist.linux-armv8l/wheel/./Bio/Phylo
2025-11-04 22:56:16,998 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Phylo/NeXMLIO.py -> build/bdist.linux-armv8l/wheel/./Bio/Phylo
2025-11-04 22:56:16,998 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Phylo/CDAO.py -> build/bdist.linux-armv8l/wheel/./Bio/Phylo
2025-11-04 22:56:16,998 root INFO creating build/bdist.linux-armv8l/wheel/Bio/Phylo/PAML
2025-11-04 22:56:16,999 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Phylo/PAML/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/Phylo/PAML
2025-11-04 22:56:16,999 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Phylo/PAML/codeml.py -> build/bdist.linux-armv8l/wheel/./Bio/Phylo/PAML
2025-11-04 22:56:16,999 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Phylo/PAML/baseml.py -> build/bdist.linux-armv8l/wheel/./Bio/Phylo/PAML
2025-11-04 22:56:16,999 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Phylo/PAML/_parse_codeml.py -> build/bdist.linux-armv8l/wheel/./Bio/Phylo/PAML
2025-11-04 22:56:17,000 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Phylo/PAML/_parse_yn00.py -> build/bdist.linux-armv8l/wheel/./Bio/Phylo/PAML
2025-11-04 22:56:17,000 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Phylo/PAML/_paml.py -> build/bdist.linux-armv8l/wheel/./Bio/Phylo/PAML
2025-11-04 22:56:17,000 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Phylo/PAML/_parse_baseml.py -> build/bdist.linux-armv8l/wheel/./Bio/Phylo/PAML
2025-11-04 22:56:17,000 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Phylo/PAML/yn00.py -> build/bdist.linux-armv8l/wheel/./Bio/Phylo/PAML
2025-11-04 22:56:17,001 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Phylo/PAML/chi2.py -> build/bdist.linux-armv8l/wheel/./Bio/Phylo/PAML
2025-11-04 22:56:17,001 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Phylo/PhyloXML.py -> build/bdist.linux-armv8l/wheel/./Bio/Phylo
2025-11-04 22:56:17,001 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Phylo/NexusIO.py -> build/bdist.linux-armv8l/wheel/./Bio/Phylo
2025-11-04 22:56:17,001 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/MaxEntropy.py -> build/bdist.linux-armv8l/wheel/./Bio
2025-11-04 22:56:17,002 root INFO creating build/bdist.linux-armv8l/wheel/Bio/Restriction
2025-11-04 22:56:17,002 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Restriction/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/Restriction
2025-11-04 22:56:17,002 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Restriction/PrintFormat.py -> build/bdist.linux-armv8l/wheel/./Bio/Restriction
2025-11-04 22:56:17,002 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Restriction/Restriction_Dictionary.py -> build/bdist.linux-armv8l/wheel/./Bio/Restriction
2025-11-04 22:56:17,003 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Restriction/Restriction.py -> build/bdist.linux-armv8l/wheel/./Bio/Restriction
2025-11-04 22:56:17,004 root INFO creating build/bdist.linux-armv8l/wheel/Bio/AlignIO
2025-11-04 22:56:17,004 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/AlignIO/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/AlignIO
2025-11-04 22:56:17,004 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/AlignIO/Interfaces.py -> build/bdist.linux-armv8l/wheel/./Bio/AlignIO
2025-11-04 22:56:17,004 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/AlignIO/ClustalIO.py -> build/bdist.linux-armv8l/wheel/./Bio/AlignIO
2025-11-04 22:56:17,005 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/AlignIO/PhylipIO.py -> build/bdist.linux-armv8l/wheel/./Bio/AlignIO
2025-11-04 22:56:17,005 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/AlignIO/MsfIO.py -> build/bdist.linux-armv8l/wheel/./Bio/AlignIO
2025-11-04 22:56:17,005 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/AlignIO/MauveIO.py -> build/bdist.linux-armv8l/wheel/./Bio/AlignIO
2025-11-04 22:56:17,005 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/AlignIO/StockholmIO.py -> build/bdist.linux-armv8l/wheel/./Bio/AlignIO
2025-11-04 22:56:17,006 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/AlignIO/EmbossIO.py -> build/bdist.linux-armv8l/wheel/./Bio/AlignIO
2025-11-04 22:56:17,006 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/AlignIO/FastaIO.py -> build/bdist.linux-armv8l/wheel/./Bio/AlignIO
2025-11-04 22:56:17,006 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/AlignIO/MafIO.py -> build/bdist.linux-armv8l/wheel/./Bio/AlignIO
2025-11-04 22:56:17,007 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/AlignIO/NexusIO.py -> build/bdist.linux-armv8l/wheel/./Bio/AlignIO
2025-11-04 22:56:17,007 root INFO creating build/bdist.linux-armv8l/wheel/Bio/Compass
2025-11-04 22:56:17,007 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Compass/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/Compass
2025-11-04 22:56:17,007 root INFO creating build/bdist.linux-armv8l/wheel/Bio/Nexus
2025-11-04 22:56:17,008 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Nexus/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/Nexus
2025-11-04 22:56:17,008 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Nexus/StandardData.py -> build/bdist.linux-armv8l/wheel/./Bio/Nexus
2025-11-04 22:56:17,008 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Nexus/cnexus.c -> build/bdist.linux-armv8l/wheel/./Bio/Nexus
2025-11-04 22:56:17,008 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Nexus/Nexus.py -> build/bdist.linux-armv8l/wheel/./Bio/Nexus
2025-11-04 22:56:17,009 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Nexus/Trees.py -> build/bdist.linux-armv8l/wheel/./Bio/Nexus
2025-11-04 22:56:17,009 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Nexus/cnexus.cpython-312-arm-linux-musleabihf.so -> build/bdist.linux-armv8l/wheel/./Bio/Nexus
2025-11-04 22:56:17,009 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Nexus/Nodes.py -> build/bdist.linux-armv8l/wheel/./Bio/Nexus
2025-11-04 22:56:17,010 root INFO creating build/bdist.linux-armv8l/wheel/Bio/codonalign
2025-11-04 22:56:17,010 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/codonalign/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/codonalign
2025-11-04 22:56:17,010 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/codonalign/codonseq.py -> build/bdist.linux-armv8l/wheel/./Bio/codonalign
2025-11-04 22:56:17,010 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/codonalign/codonalignment.py -> build/bdist.linux-armv8l/wheel/./Bio/codonalign
2025-11-04 22:56:17,011 root INFO creating build/bdist.linux-armv8l/wheel/Bio/Cluster
2025-11-04 22:56:17,011 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Cluster/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/Cluster
2025-11-04 22:56:17,011 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Cluster/cluster.h -> build/bdist.linux-armv8l/wheel/./Bio/Cluster
2025-11-04 22:56:17,011 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Cluster/clustermodule.c -> build/bdist.linux-armv8l/wheel/./Bio/Cluster
2025-11-04 22:56:17,012 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Cluster/cluster.c -> build/bdist.linux-armv8l/wheel/./Bio/Cluster
2025-11-04 22:56:17,012 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Cluster/_cluster.cpython-312-arm-linux-musleabihf.so -> build/bdist.linux-armv8l/wheel/./Bio/Cluster
2025-11-04 22:56:17,013 root INFO creating build/bdist.linux-armv8l/wheel/Bio/Graphics
2025-11-04 22:56:17,013 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Graphics/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/Graphics
2025-11-04 22:56:17,013 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Graphics/BasicChromosome.py -> build/bdist.linux-armv8l/wheel/./Bio/Graphics
2025-11-04 22:56:17,013 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Graphics/KGML_vis.py -> build/bdist.linux-armv8l/wheel/./Bio/Graphics
2025-11-04 22:56:17,014 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Graphics/Comparative.py -> build/bdist.linux-armv8l/wheel/./Bio/Graphics
2025-11-04 22:56:17,014 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Graphics/ColorSpiral.py -> build/bdist.linux-armv8l/wheel/./Bio/Graphics
2025-11-04 22:56:17,014 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Graphics/DisplayRepresentation.py -> build/bdist.linux-armv8l/wheel/./Bio/Graphics
2025-11-04 22:56:17,014 root INFO creating build/bdist.linux-armv8l/wheel/Bio/Graphics/GenomeDiagram
2025-11-04 22:56:17,015 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Graphics/GenomeDiagram/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/Graphics/GenomeDiagram
2025-11-04 22:56:17,015 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Graphics/GenomeDiagram/_GraphSet.py -> build/bdist.linux-armv8l/wheel/./Bio/Graphics/GenomeDiagram
2025-11-04 22:56:17,015 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Graphics/GenomeDiagram/_FeatureSet.py -> build/bdist.linux-armv8l/wheel/./Bio/Graphics/GenomeDiagram
2025-11-04 22:56:17,015 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Graphics/GenomeDiagram/_Diagram.py -> build/bdist.linux-armv8l/wheel/./Bio/Graphics/GenomeDiagram
2025-11-04 22:56:17,016 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Graphics/GenomeDiagram/_CrossLink.py -> build/bdist.linux-armv8l/wheel/./Bio/Graphics/GenomeDiagram
2025-11-04 22:56:17,016 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Graphics/GenomeDiagram/_Track.py -> build/bdist.linux-armv8l/wheel/./Bio/Graphics/GenomeDiagram
2025-11-04 22:56:17,016 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Graphics/GenomeDiagram/_Colors.py -> build/bdist.linux-armv8l/wheel/./Bio/Graphics/GenomeDiagram
2025-11-04 22:56:17,016 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Graphics/GenomeDiagram/_Feature.py -> build/bdist.linux-armv8l/wheel/./Bio/Graphics/GenomeDiagram
2025-11-04 22:56:17,017 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Graphics/GenomeDiagram/_CircularDrawer.py -> build/bdist.linux-armv8l/wheel/./Bio/Graphics/GenomeDiagram
2025-11-04 22:56:17,017 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Graphics/GenomeDiagram/_LinearDrawer.py -> build/bdist.linux-armv8l/wheel/./Bio/Graphics/GenomeDiagram
2025-11-04 22:56:17,017 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Graphics/GenomeDiagram/_Graph.py -> build/bdist.linux-armv8l/wheel/./Bio/Graphics/GenomeDiagram
2025-11-04 22:56:17,017 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Graphics/GenomeDiagram/_AbstractDrawer.py -> build/bdist.linux-armv8l/wheel/./Bio/Graphics/GenomeDiagram
2025-11-04 22:56:17,018 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Graphics/Distribution.py -> build/bdist.linux-armv8l/wheel/./Bio/Graphics
2025-11-04 22:56:17,018 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/File.py -> build/bdist.linux-armv8l/wheel/./Bio
2025-11-04 22:56:17,018 root INFO creating build/bdist.linux-armv8l/wheel/Bio/Sequencing
2025-11-04 22:56:17,019 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Sequencing/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/Sequencing
2025-11-04 22:56:17,019 root INFO creating build/bdist.linux-armv8l/wheel/Bio/Sequencing/Applications
2025-11-04 22:56:17,019 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Sequencing/Applications/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/Sequencing/Applications
2025-11-04 22:56:17,019 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Sequencing/Applications/_samtools.py -> build/bdist.linux-armv8l/wheel/./Bio/Sequencing/Applications
2025-11-04 22:56:17,019 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Sequencing/Applications/_Novoalign.py -> build/bdist.linux-armv8l/wheel/./Bio/Sequencing/Applications
2025-11-04 22:56:17,020 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Sequencing/Applications/_bwa.py -> build/bdist.linux-armv8l/wheel/./Bio/Sequencing/Applications
2025-11-04 22:56:17,020 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Sequencing/Ace.py -> build/bdist.linux-armv8l/wheel/./Bio/Sequencing
2025-11-04 22:56:17,020 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Sequencing/Phd.py -> build/bdist.linux-armv8l/wheel/./Bio/Sequencing
2025-11-04 22:56:17,020 root INFO creating build/bdist.linux-armv8l/wheel/Bio/KEGG
2025-11-04 22:56:17,021 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/KEGG/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/KEGG
2025-11-04 22:56:17,021 root INFO creating build/bdist.linux-armv8l/wheel/Bio/KEGG/Gene
2025-11-04 22:56:17,021 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/KEGG/Gene/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/KEGG/Gene
2025-11-04 22:56:17,021 root INFO creating build/bdist.linux-armv8l/wheel/Bio/KEGG/KGML
2025-11-04 22:56:17,021 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/KEGG/KGML/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/KEGG/KGML
2025-11-04 22:56:17,022 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/KEGG/KGML/KGML_pathway.py -> build/bdist.linux-armv8l/wheel/./Bio/KEGG/KGML
2025-11-04 22:56:17,022 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/KEGG/KGML/KGML_parser.py -> build/bdist.linux-armv8l/wheel/./Bio/KEGG/KGML
2025-11-04 22:56:17,022 root INFO creating build/bdist.linux-armv8l/wheel/Bio/KEGG/Map
2025-11-04 22:56:17,022 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/KEGG/Map/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/KEGG/Map
2025-11-04 22:56:17,023 root INFO creating build/bdist.linux-armv8l/wheel/Bio/KEGG/Compound
2025-11-04 22:56:17,023 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/KEGG/Compound/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/KEGG/Compound
2025-11-04 22:56:17,023 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/KEGG/REST.py -> build/bdist.linux-armv8l/wheel/./Bio/KEGG
2025-11-04 22:56:17,023 root INFO creating build/bdist.linux-armv8l/wheel/Bio/KEGG/Enzyme
2025-11-04 22:56:17,024 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/KEGG/Enzyme/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/KEGG/Enzyme
2025-11-04 22:56:17,024 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/cpairwise2.cpython-312-arm-linux-musleabihf.so -> build/bdist.linux-armv8l/wheel/./Bio
2025-11-04 22:56:17,024 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/cpairwise2module.c -> build/bdist.linux-armv8l/wheel/./Bio
2025-11-04 22:56:17,024 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/bgzf.py -> build/bdist.linux-armv8l/wheel/./Bio
2025-11-04 22:56:17,024 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/kNN.py -> build/bdist.linux-armv8l/wheel/./Bio
2025-11-04 22:56:17,025 root INFO creating build/bdist.linux-armv8l/wheel/Bio/Pathway
2025-11-04 22:56:17,025 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Pathway/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/Pathway
2025-11-04 22:56:17,025 root INFO creating build/bdist.linux-armv8l/wheel/Bio/Pathway/Rep
2025-11-04 22:56:17,025 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Pathway/Rep/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/Pathway/Rep
2025-11-04 22:56:17,026 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Pathway/Rep/Graph.py -> build/bdist.linux-armv8l/wheel/./Bio/Pathway/Rep
2025-11-04 22:56:17,026 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Pathway/Rep/MultiGraph.py -> build/bdist.linux-armv8l/wheel/./Bio/Pathway/Rep
2025-11-04 22:56:17,026 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/MarkovModel.py -> build/bdist.linux-armv8l/wheel/./Bio
2025-11-04 22:56:17,026 root INFO creating build/bdist.linux-armv8l/wheel/Bio/SCOP
2025-11-04 22:56:17,027 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/SCOP/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/SCOP
2025-11-04 22:56:17,027 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/SCOP/Hie.py -> build/bdist.linux-armv8l/wheel/./Bio/SCOP
2025-11-04 22:56:17,027 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/SCOP/Raf.py -> build/bdist.linux-armv8l/wheel/./Bio/SCOP
2025-11-04 22:56:17,027 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/SCOP/Dom.py -> build/bdist.linux-armv8l/wheel/./Bio/SCOP
2025-11-04 22:56:17,027 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/SCOP/Cla.py -> build/bdist.linux-armv8l/wheel/./Bio/SCOP
2025-11-04 22:56:17,027 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/SCOP/Des.py -> build/bdist.linux-armv8l/wheel/./Bio/SCOP
2025-11-04 22:56:17,028 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/SCOP/Residues.py -> build/bdist.linux-armv8l/wheel/./Bio/SCOP
2025-11-04 22:56:17,028 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Seq.py -> build/bdist.linux-armv8l/wheel/./Bio
2025-11-04 22:56:17,028 root INFO creating build/bdist.linux-armv8l/wheel/Bio/Data
2025-11-04 22:56:17,028 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Data/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/Data
2025-11-04 22:56:17,029 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Data/IUPACData.py -> build/bdist.linux-armv8l/wheel/./Bio/Data
2025-11-04 22:56:17,029 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Data/CodonTable.py -> build/bdist.linux-armv8l/wheel/./Bio/Data
2025-11-04 22:56:17,029 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Data/PDBData.py -> build/bdist.linux-armv8l/wheel/./Bio/Data
2025-11-04 22:56:17,029 root INFO creating build/bdist.linux-armv8l/wheel/Bio/TogoWS
2025-11-04 22:56:17,029 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/TogoWS/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/TogoWS
2025-11-04 22:56:17,030 root INFO creating build/bdist.linux-armv8l/wheel/Bio/Medline
2025-11-04 22:56:17,030 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Medline/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/Medline
2025-11-04 22:56:17,030 root INFO creating build/bdist.linux-armv8l/wheel/Bio/Blast
2025-11-04 22:56:17,030 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Blast/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/Blast
2025-11-04 22:56:17,031 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Blast/_writers.py -> build/bdist.linux-armv8l/wheel/./Bio/Blast
2025-11-04 22:56:17,031 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Blast/NCBIWWW.py -> build/bdist.linux-armv8l/wheel/./Bio/Blast
2025-11-04 22:56:17,031 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Blast/Applications.py -> build/bdist.linux-armv8l/wheel/./Bio/Blast
2025-11-04 22:56:17,031 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Blast/_parser.py -> build/bdist.linux-armv8l/wheel/./Bio/Blast
2025-11-04 22:56:17,032 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Blast/NCBIXML.py -> build/bdist.linux-armv8l/wheel/./Bio/Blast
2025-11-04 22:56:17,032 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/_utils.py -> build/bdist.linux-armv8l/wheel/./Bio
2025-11-04 22:56:17,032 root INFO creating build/bdist.linux-armv8l/wheel/Bio/PopGen
2025-11-04 22:56:17,032 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/PopGen/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/PopGen
2025-11-04 22:56:17,033 root INFO creating build/bdist.linux-armv8l/wheel/Bio/PopGen/GenePop
2025-11-04 22:56:17,033 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/PopGen/GenePop/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/PopGen/GenePop
2025-11-04 22:56:17,033 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/PopGen/GenePop/LargeFileParser.py -> build/bdist.linux-armv8l/wheel/./Bio/PopGen/GenePop
2025-11-04 22:56:17,033 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/PopGen/GenePop/EasyController.py -> build/bdist.linux-armv8l/wheel/./Bio/PopGen/GenePop
2025-11-04 22:56:17,033 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/PopGen/GenePop/Controller.py -> build/bdist.linux-armv8l/wheel/./Bio/PopGen/GenePop
2025-11-04 22:56:17,034 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/PopGen/GenePop/FileParser.py -> build/bdist.linux-armv8l/wheel/./Bio/PopGen/GenePop
2025-11-04 22:56:17,034 root INFO creating build/bdist.linux-armv8l/wheel/Bio/Emboss
2025-11-04 22:56:17,034 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Emboss/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/Emboss
2025-11-04 22:56:17,034 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Emboss/Primer3.py -> build/bdist.linux-armv8l/wheel/./Bio/Emboss
2025-11-04 22:56:17,035 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Emboss/Applications.py -> build/bdist.linux-armv8l/wheel/./Bio/Emboss
2025-11-04 22:56:17,035 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Emboss/PrimerSearch.py -> build/bdist.linux-armv8l/wheel/./Bio/Emboss
2025-11-04 22:56:17,035 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/LogisticRegression.py -> build/bdist.linux-armv8l/wheel/./Bio
2025-11-04 22:56:17,035 root INFO creating build/bdist.linux-armv8l/wheel/Bio/SwissProt
2025-11-04 22:56:17,035 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/SwissProt/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/SwissProt
2025-11-04 22:56:17,036 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/SwissProt/KeyWList.py -> build/bdist.linux-armv8l/wheel/./Bio/SwissProt
2025-11-04 22:56:17,036 root INFO creating build/bdist.linux-armv8l/wheel/Bio/UniProt
2025-11-04 22:56:17,036 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/UniProt/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/UniProt
2025-11-04 22:56:17,036 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/UniProt/GOA.py -> build/bdist.linux-armv8l/wheel/./Bio/UniProt
2025-11-04 22:56:17,037 root INFO creating build/bdist.linux-armv8l/wheel/Bio/SearchIO
2025-11-04 22:56:17,037 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/SearchIO/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/SearchIO
2025-11-04 22:56:17,037 root INFO creating build/bdist.linux-armv8l/wheel/Bio/SearchIO/HHsuiteIO
2025-11-04 22:56:17,037 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/SearchIO/HHsuiteIO/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/SearchIO/HHsuiteIO
2025-11-04 22:56:17,037 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/SearchIO/HHsuiteIO/hhsuite2_text.py -> build/bdist.linux-armv8l/wheel/./Bio/SearchIO/HHsuiteIO
2025-11-04 22:56:17,038 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/SearchIO/_index.py -> build/bdist.linux-armv8l/wheel/./Bio/SearchIO
2025-11-04 22:56:17,038 root INFO creating build/bdist.linux-armv8l/wheel/Bio/SearchIO/BlastIO
2025-11-04 22:56:17,038 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/SearchIO/BlastIO/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/SearchIO/BlastIO
2025-11-04 22:56:17,038 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/SearchIO/BlastIO/blast_xml.py -> build/bdist.linux-armv8l/wheel/./Bio/SearchIO/BlastIO
2025-11-04 22:56:17,039 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/SearchIO/BlastIO/blast_tab.py -> build/bdist.linux-armv8l/wheel/./Bio/SearchIO/BlastIO
2025-11-04 22:56:17,039 root INFO creating build/bdist.linux-armv8l/wheel/Bio/SearchIO/_model
2025-11-04 22:56:17,039 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/SearchIO/_model/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/SearchIO/_model
2025-11-04 22:56:17,039 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/SearchIO/_model/query.py -> build/bdist.linux-armv8l/wheel/./Bio/SearchIO/_model
2025-11-04 22:56:17,039 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/SearchIO/_model/hit.py -> build/bdist.linux-armv8l/wheel/./Bio/SearchIO/_model
2025-11-04 22:56:17,040 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/SearchIO/_model/hsp.py -> build/bdist.linux-armv8l/wheel/./Bio/SearchIO/_model
2025-11-04 22:56:17,040 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/SearchIO/_model/_base.py -> build/bdist.linux-armv8l/wheel/./Bio/SearchIO/_model
2025-11-04 22:56:17,040 root INFO creating build/bdist.linux-armv8l/wheel/Bio/SearchIO/ExonerateIO
2025-11-04 22:56:17,040 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/SearchIO/ExonerateIO/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/SearchIO/ExonerateIO
2025-11-04 22:56:17,041 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/SearchIO/ExonerateIO/exonerate_vulgar.py -> build/bdist.linux-armv8l/wheel/./Bio/SearchIO/ExonerateIO
2025-11-04 22:56:17,041 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/SearchIO/ExonerateIO/exonerate_text.py -> build/bdist.linux-armv8l/wheel/./Bio/SearchIO/ExonerateIO
2025-11-04 22:56:17,041 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/SearchIO/ExonerateIO/_base.py -> build/bdist.linux-armv8l/wheel/./Bio/SearchIO/ExonerateIO
2025-11-04 22:56:17,041 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/SearchIO/ExonerateIO/exonerate_cigar.py -> build/bdist.linux-armv8l/wheel/./Bio/SearchIO/ExonerateIO
2025-11-04 22:56:17,041 root INFO creating build/bdist.linux-armv8l/wheel/Bio/SearchIO/HmmerIO
2025-11-04 22:56:17,042 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/SearchIO/HmmerIO/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/SearchIO/HmmerIO
2025-11-04 22:56:17,042 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/SearchIO/HmmerIO/hmmer3_tab.py -> build/bdist.linux-armv8l/wheel/./Bio/SearchIO/HmmerIO
2025-11-04 22:56:17,042 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/SearchIO/HmmerIO/hmmer2_text.py -> build/bdist.linux-armv8l/wheel/./Bio/SearchIO/HmmerIO
2025-11-04 22:56:17,042 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/SearchIO/HmmerIO/hmmer3_text.py -> build/bdist.linux-armv8l/wheel/./Bio/SearchIO/HmmerIO
2025-11-04 22:56:17,042 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/SearchIO/HmmerIO/_base.py -> build/bdist.linux-armv8l/wheel/./Bio/SearchIO/HmmerIO
2025-11-04 22:56:17,043 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/SearchIO/HmmerIO/hmmer3_domtab.py -> build/bdist.linux-armv8l/wheel/./Bio/SearchIO/HmmerIO
2025-11-04 22:56:17,043 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/SearchIO/_utils.py -> build/bdist.linux-armv8l/wheel/./Bio/SearchIO
2025-11-04 22:56:17,043 root INFO creating build/bdist.linux-armv8l/wheel/Bio/SearchIO/InterproscanIO
2025-11-04 22:56:17,043 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/SearchIO/InterproscanIO/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/SearchIO/InterproscanIO
2025-11-04 22:56:17,044 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/SearchIO/InterproscanIO/interproscan_xml.py -> build/bdist.linux-armv8l/wheel/./Bio/SearchIO/InterproscanIO
2025-11-04 22:56:17,044 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/SearchIO/FastaIO.py -> build/bdist.linux-armv8l/wheel/./Bio/SearchIO
2025-11-04 22:56:17,044 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/SearchIO/BlatIO.py -> build/bdist.linux-armv8l/wheel/./Bio/SearchIO
2025-11-04 22:56:17,044 root INFO creating build/bdist.linux-armv8l/wheel/Bio/CAPS
2025-11-04 22:56:17,044 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/CAPS/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/CAPS
2025-11-04 22:56:17,045 root INFO creating build/bdist.linux-armv8l/wheel/Bio/Affy
2025-11-04 22:56:17,045 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Affy/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/Affy
2025-11-04 22:56:17,045 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Affy/CelFile.py -> build/bdist.linux-armv8l/wheel/./Bio/Affy
2025-11-04 22:56:17,045 root INFO creating build/bdist.linux-armv8l/wheel/Bio/SVDSuperimposer
2025-11-04 22:56:17,046 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/SVDSuperimposer/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/SVDSuperimposer
2025-11-04 22:56:17,046 root INFO creating build/bdist.linux-armv8l/wheel/Bio/SeqUtils
2025-11-04 22:56:17,046 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/SeqUtils/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/SeqUtils
2025-11-04 22:56:17,046 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/SeqUtils/ProtParam.py -> build/bdist.linux-armv8l/wheel/./Bio/SeqUtils
2025-11-04 22:56:17,046 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/SeqUtils/CheckSum.py -> build/bdist.linux-armv8l/wheel/./Bio/SeqUtils
2025-11-04 22:56:17,047 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/SeqUtils/lcc.py -> build/bdist.linux-armv8l/wheel/./Bio/SeqUtils
2025-11-04 22:56:17,047 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/SeqUtils/MeltingTemp.py -> build/bdist.linux-armv8l/wheel/./Bio/SeqUtils
2025-11-04 22:56:17,047 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/SeqUtils/ProtParamData.py -> build/bdist.linux-armv8l/wheel/./Bio/SeqUtils
2025-11-04 22:56:17,047 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/SeqUtils/IsoelectricPoint.py -> build/bdist.linux-armv8l/wheel/./Bio/SeqUtils
2025-11-04 22:56:17,048 root INFO creating build/bdist.linux-armv8l/wheel/Bio/motifs
2025-11-04 22:56:17,048 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/motifs/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/motifs
2025-11-04 22:56:17,048 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/motifs/_pwm.cpython-312-arm-linux-musleabihf.so -> build/bdist.linux-armv8l/wheel/./Bio/motifs
2025-11-04 22:56:17,048 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/motifs/transfac.py -> build/bdist.linux-armv8l/wheel/./Bio/motifs
2025-11-04 22:56:17,048 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/motifs/alignace.py -> build/bdist.linux-armv8l/wheel/./Bio/motifs
2025-11-04 22:56:17,049 root INFO creating build/bdist.linux-armv8l/wheel/Bio/motifs/jaspar
2025-11-04 22:56:17,049 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/motifs/jaspar/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/motifs/jaspar
2025-11-04 22:56:17,049 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/motifs/jaspar/db.py -> build/bdist.linux-armv8l/wheel/./Bio/motifs/jaspar
2025-11-04 22:56:17,049 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/motifs/minimal.py -> build/bdist.linux-armv8l/wheel/./Bio/motifs
2025-11-04 22:56:17,049 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/motifs/pfm.py -> build/bdist.linux-armv8l/wheel/./Bio/motifs
2025-11-04 22:56:17,050 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/motifs/xms.py -> build/bdist.linux-armv8l/wheel/./Bio/motifs
2025-11-04 22:56:17,050 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/motifs/meme.py -> build/bdist.linux-armv8l/wheel/./Bio/motifs
2025-11-04 22:56:17,050 root INFO creating build/bdist.linux-armv8l/wheel/Bio/motifs/applications
2025-11-04 22:56:17,050 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/motifs/applications/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/motifs/applications
2025-11-04 22:56:17,050 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/motifs/applications/_xxmotif.py -> build/bdist.linux-armv8l/wheel/./Bio/motifs/applications
2025-11-04 22:56:17,051 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/motifs/mast.py -> build/bdist.linux-armv8l/wheel/./Bio/motifs
2025-11-04 22:56:17,051 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/motifs/clusterbuster.py -> build/bdist.linux-armv8l/wheel/./Bio/motifs
2025-11-04 22:56:17,051 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/motifs/matrix.py -> build/bdist.linux-armv8l/wheel/./Bio/motifs
2025-11-04 22:56:17,051 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/motifs/_pwm.c -> build/bdist.linux-armv8l/wheel/./Bio/motifs
2025-11-04 22:56:17,051 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/motifs/thresholds.py -> build/bdist.linux-armv8l/wheel/./Bio/motifs
2025-11-04 22:56:17,052 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/SeqRecord.py -> build/bdist.linux-armv8l/wheel/./Bio
2025-11-04 22:56:17,052 root INFO creating build/bdist.linux-armv8l/wheel/Bio/phenotype
2025-11-04 22:56:17,052 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/phenotype/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/phenotype
2025-11-04 22:56:17,052 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/phenotype/phen_micro.py -> build/bdist.linux-armv8l/wheel/./Bio/phenotype
2025-11-04 22:56:17,053 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/phenotype/pm_fitting.py -> build/bdist.linux-armv8l/wheel/./Bio/phenotype
2025-11-04 22:56:17,053 root INFO creating build/bdist.linux-armv8l/wheel/Bio/NMR
2025-11-04 22:56:17,053 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/NMR/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/NMR
2025-11-04 22:56:17,053 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/NMR/xpktools.py -> build/bdist.linux-armv8l/wheel/./Bio/NMR
2025-11-04 22:56:17,053 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/NMR/NOEtools.py -> build/bdist.linux-armv8l/wheel/./Bio/NMR
2025-11-04 22:56:17,054 root INFO creating build/bdist.linux-armv8l/wheel/Bio/PDB
2025-11-04 22:56:17,054 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/PDB/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2025-11-04 22:56:17,054 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/PDB/ic_rebuild.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2025-11-04 22:56:17,054 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/PDB/MMCIFParser.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2025-11-04 22:56:17,055 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/PDB/qcprot.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2025-11-04 22:56:17,055 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/PDB/Entity.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2025-11-04 22:56:17,055 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/PDB/DSSP.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2025-11-04 22:56:17,055 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/PDB/mmcifio.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2025-11-04 22:56:17,055 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/PDB/Dice.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2025-11-04 22:56:17,056 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/PDB/PDBIO.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2025-11-04 22:56:17,056 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/PDB/_bcif_helper.cpython-312-arm-linux-musleabihf.so -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2025-11-04 22:56:17,056 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/PDB/StructureAlignment.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2025-11-04 22:56:17,056 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/PDB/cealign.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2025-11-04 22:56:17,056 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/PDB/SCADIO.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2025-11-04 22:56:17,057 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/PDB/ic_data.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2025-11-04 22:56:17,057 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/PDB/PDBList.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2025-11-04 22:56:17,057 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/PDB/binary_cif.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2025-11-04 22:56:17,057 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/PDB/NeighborSearch.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2025-11-04 22:56:17,057 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/PDB/PDBMLParser.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2025-11-04 22:56:17,058 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/PDB/vectors.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2025-11-04 22:56:17,058 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/PDB/StructureBuilder.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2025-11-04 22:56:17,058 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/PDB/SASA.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2025-11-04 22:56:17,058 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/PDB/MMCIF2Dict.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2025-11-04 22:56:17,058 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/PDB/internal_coords.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2025-11-04 22:56:17,059 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/PDB/PDBParser.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2025-11-04 22:56:17,059 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/PDB/ccealignmodule.c -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2025-11-04 22:56:17,059 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/PDB/Structure.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2025-11-04 22:56:17,059 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/PDB/Selection.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2025-11-04 22:56:17,060 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/PDB/kdtrees.c -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2025-11-04 22:56:17,060 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/PDB/PSEA.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2025-11-04 22:56:17,060 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/PDB/alphafold_db.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2025-11-04 22:56:17,060 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/PDB/Model.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2025-11-04 22:56:17,060 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/PDB/PDBExceptions.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2025-11-04 22:56:17,061 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/PDB/Polypeptide.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2025-11-04 22:56:17,061 root INFO creating build/bdist.linux-armv8l/wheel/Bio/PDB/mmtf
2025-11-04 22:56:17,061 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/PDB/mmtf/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB/mmtf
2025-11-04 22:56:17,061 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/PDB/mmtf/mmtfio.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB/mmtf
2025-11-04 22:56:17,061 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/PDB/mmtf/DefaultParser.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB/mmtf
2025-11-04 22:56:17,061 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/PDB/bcifhelpermodule.c -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2025-11-04 22:56:17,062 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/PDB/AbstractPropertyMap.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2025-11-04 22:56:17,062 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/PDB/Atom.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2025-11-04 22:56:17,062 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/PDB/ccealign.cpython-312-arm-linux-musleabihf.so -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2025-11-04 22:56:17,062 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/PDB/NACCESS.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2025-11-04 22:56:17,063 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/PDB/ResidueDepth.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2025-11-04 22:56:17,063 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/PDB/parse_pdb_header.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2025-11-04 22:56:17,063 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/PDB/PICIO.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2025-11-04 22:56:17,063 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/PDB/Superimposer.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2025-11-04 22:56:17,063 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/PDB/FragmentMapper.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2025-11-04 22:56:17,064 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/PDB/Chain.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2025-11-04 22:56:17,064 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/PDB/Residue.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2025-11-04 22:56:17,064 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/PDB/HSExposure.py -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2025-11-04 22:56:17,064 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/PDB/kdtrees.cpython-312-arm-linux-musleabihf.so -> build/bdist.linux-armv8l/wheel/./Bio/PDB
2025-11-04 22:56:17,064 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/SeqFeature.py -> build/bdist.linux-armv8l/wheel/./Bio
2025-11-04 22:56:17,065 root INFO creating build/bdist.linux-armv8l/wheel/Bio/Entrez
2025-11-04 22:56:17,065 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/Entrez
2025-11-04 22:56:17,065 root INFO creating build/bdist.linux-armv8l/wheel/Bio/Entrez/XSDs
2025-11-04 22:56:17,066 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/XSDs/NCBI_BlastOutput2.mod.xsd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/XSDs
2025-11-04 22:56:17,066 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/XSDs/IPGReportSet.xsd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/XSDs
2025-11-04 22:56:17,066 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/XSDs/NCBI_BlastOutput2.xsd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/XSDs
2025-11-04 22:56:17,066 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/Parser.py -> build/bdist.linux-armv8l/wheel/./Bio/Entrez
2025-11-04 22:56:17,067 root INFO creating build/bdist.linux-armv8l/wheel/Bio/Entrez/DTDs
2025-11-04 22:56:17,067 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_PubMed.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,067 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/nlmcommon_090101.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,067 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/SP_General.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,067 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_Seqset.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,068 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/nlmserials_080101.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,068 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_Entrezgene.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,068 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_SeqCode.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,068 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/MMDB_Features.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,068 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_Mime.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,069 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/XHTMLtablesetup.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,069 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/backmatter.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,069 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_SeqTable.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,069 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/JATS-display1-3.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,069 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_Mim.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,070 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_Seqset.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,070 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/BITS-embedded-index2.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,070 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/OMSSA.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,070 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_BlastDL.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,070 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/JATS-nlmcitation1-3.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,071 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/nlmmedline_011101.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,071 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/nlmcommon_080101.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,071 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_RNA.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,071 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/Docsum_3_3.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,071 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NSE.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,071 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_Project.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,072 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/JATS-XHTMLtablesetup1-3.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,072 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/nlmmedlinecitation_080101.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,072 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_ScoreMat.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,072 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/Docsum_3_2.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,073 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_Gene.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,073 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_MedArchive.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,073 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/egquery.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,073 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_all.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,073 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/chars.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,074 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/elink_020122.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,074 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_Sequence.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,074 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/htmltable.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,074 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_TSeq.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,074 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/esearch.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,074 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/archivecustom-modules.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,075 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_PCSubstance.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,075 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/JATS-link1-3.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,075 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_ID1Access.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,075 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/SP_General.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,075 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_BioTree.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,076 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/bookdoc_120101.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,076 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/MMDB_Chemical_graph.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,076 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_Entrezgene.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,076 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/MMDB.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,076 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_TxInit.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,077 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_FeatDef.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,077 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/pubmed_090101.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,077 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_Organism.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,077 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/JATS-journalmeta1-3.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,077 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/pubmed_110101.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,077 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/MMDB_Features.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,078 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/JATS-archivecustom-classes1-3.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,078 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/PRF_General.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,078 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_Project.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,078 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/mathml3-qname1.mod -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,078 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_Cdd.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,079 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/GenBank_General.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,079 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/PDB_General.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,079 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/JATS-format1-3.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,079 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_Systems.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,079 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/mmlextra.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,080 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/isoamsn.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,080 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/eInfo_020511.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,080 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_Gene.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,080 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/isoamsa.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,080 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_Pub.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,081 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/mathml2-qname-1.mod -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,081 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_Protein.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,081 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_Pub.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,081 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/JATS-common1-3.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,082 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/archivearticle.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,082 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_ScoreMat.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,082 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/esummary-v1.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,082 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/isogrk1.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,082 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/JATS-mathml3-mathmlsetup1-3.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,083 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/mmlalias.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,083 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/pubmed_180101.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,083 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/MMDB_Structural_model.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,083 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_Sequence.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,083 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/nlmmedlinecitationset_130101.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,084 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/JATS-notat1-3.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,084 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_Cn3d.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,084 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/nlmmedlinecitationset_100301.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,084 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/isopub.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,084 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_Access.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,085 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/nlmsharedcatcit_090101.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,085 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/nlm-articleset-2.0.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,085 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/xhtml-inlstyle-1.mod -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,085 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_Seqres.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,085 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_BlastOutput.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,086 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_Medlars.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,086 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/nlmmedlinecitationset_100101.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,086 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_Medline.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,086 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/default-classes.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,086 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_Cdd.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,087 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_Access.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,087 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_MedArchive.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,087 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/phrase.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,087 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/JATS-mathml3-modules1-3.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,087 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_ObjPrt.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,088 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/isomscr.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,088 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_PCAssay.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,088 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/eLink_090910.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,088 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_ID1Access.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,088 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/pubmed_130101.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,089 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_Organism.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,089 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/OMSSA.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,089 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/pubmed_080101.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,089 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/isoamsb.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,089 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_TxInit.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,089 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/Docsum_3_0.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,090 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/journalmeta.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,090 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/isoamso.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,090 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/esummary_clinvar.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,090 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/archivecustom-mixes.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,090 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_Seqalign.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,091 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/JATS-math1-3.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,091 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_Entrez2.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,091 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/EMBL_General.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,091 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/PDB_General.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,091 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/references.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,092 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/JATS-articlemeta1-3.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,092 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/modules.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,092 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/isonum.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,092 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_Submit.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,093 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_Seq_split.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,093 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/archivecustom-classes.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,093 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/pmc-1.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,093 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/isogrk4.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,093 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_ObjPrt.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,094 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/nlmmedlinecitation_011101.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,094 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/JATS-references1-3.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,094 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/isocyr1.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,094 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_ID2Access.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,095 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_SeqCode.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,095 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/JATS-related-object1-3.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,095 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_SeqTable.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,095 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_Medline.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,095 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/isocyr2.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,096 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_GBSeq.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,096 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/MMDB.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,096 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_Variation.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,096 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/xmlspecchars.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,096 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/JATS-modules1-3.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,097 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/pubmed_120101.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,097 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/common.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,097 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/isoamsr.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,097 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/nlmmedlinecitationset_130501.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,098 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/MMDB_Chemical_graph.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,098 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/list.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,098 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_Rsite.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,098 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/JATS-backmatter1-3.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,098 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/JATS-default-mixes1-3.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,099 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_TSeq.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,099 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/nlmmedline_080101.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,099 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/Docsum_3_1.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,099 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_GBSeq.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,099 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/nlmserials_100101.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,100 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/mathml3.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,100 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/JATS-funding1-3.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,100 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_Entity.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,100 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/nlmsharedcatcit_080101.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,101 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_PCSubstance.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,101 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_BioSource.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,101 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/nlmmedlinecitationset_110101.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,101 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/einfo.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,101 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_RNA.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,101 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/nlmmedline_090101.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,102 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_Blast4.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,102 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/EMBL_General.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,102 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/JATS-archivecustom-modules1-3.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,102 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_General.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,102 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/JATS-archivearticle1-3-mathml3.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,103 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/default-mixes.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,103 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_PCAssay.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,103 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/mathml2.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,103 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/PRF_General.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,104 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/section.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,104 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/pubmed_130501.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,104 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/bookdoc_140101.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,104 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/Docsum_3_3.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,104 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/pubmed_020114.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,105 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/JATS-archivecustom-mixes1-3.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,105 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/nlmmedlinecitationset_140101.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,105 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_Mime.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,105 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_Rsite.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,105 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/JATS-ali-namespace1-3.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,105 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/mathml-in-pubmed.mod -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,106 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/pubmed_180601.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,106 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/elink.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,106 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/taxon.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,106 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/link.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,106 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_Seqfeat.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,107 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_Seqloc.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,107 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_Mim.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,107 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_Medlars.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,107 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_Seqres.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,107 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/xhtml-table-1.mod -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,108 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_BlastOutput.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,108 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/isodia.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,108 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/isomopf.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,108 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_Remap.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,108 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_BlastDL.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,109 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/JATS-default-classes1-3.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,109 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_Blast4.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,109 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_Remap.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,109 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/Docsum_3_1.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,109 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/isotech.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,110 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/isolat1.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,110 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_Cn3d.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,110 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_Biblio.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,110 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/para.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,111 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/eLink_101123.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,111 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/bookdoc_130101.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,111 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_Protein.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,111 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/bookdoc_150101.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,111 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/Docsum_3_4.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,111 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_PubMed.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,112 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_ID2Access.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,112 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/MMDB_Structural_model.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,112 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/pubmed_150101.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,112 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/JATS-archivecustom-models1-3.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,113 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/JATS-xmlspecchars1-3.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,113 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/nlmmedlinecitationset_120101.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,113 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/isomfrk.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,113 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_General.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,113 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/eSpell.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,114 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/eSearch_020511.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,114 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/INSD_INSDSeq.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,114 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/HomoloGene.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,114 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/articlemeta.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,114 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/ePost_020511.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,115 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_Entrez2.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,115 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/pubmed_140101.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,115 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_BioTree.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,115 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/math.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,115 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/HomoloGene.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,115 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/nlmcommon_011101.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,116 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/JATS-para1-3.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,116 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/nlmmedlinecitationset_150101.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,116 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/Docsum_3_0.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,116 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/JATS-section1-3.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,117 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/isogrk2.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,117 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/display.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,117 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/archivecustom-models.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,117 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NSE.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,118 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/pubmed_190101.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,118 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/PIR_General.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,118 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/JATS-common-atts1-3.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,118 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/bookdoc_110101.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,118 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/JATS-list1-3.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,119 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_Variation.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,119 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/isoamsc.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,119 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_Biblio.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,119 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_Seq_split.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,119 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/nlmcatalogrecordset_170601.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,120 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_Seqfeat.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,120 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_Seqalign.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,120 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/Docsum_3_4.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,120 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/esummary_gene.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,120 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/pubmed_100101.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,121 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/Docsum_3_2.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,121 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/JATS-chars1-3.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,121 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/eSummary_041029.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,121 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/nlmmedlinecitation_090101.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,121 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/notat.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,121 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_Submit.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,122 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_FeatDef.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,122 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_BioSource.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,122 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/mathmlsetup.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,122 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/JATS-phrase1-3.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,122 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/NCBI_Seqloc.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,123 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/BITS-question-answer2.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,123 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/pubmed_100301.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,123 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/isolat2.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,123 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/epost.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,123 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/isogrk3.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,124 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/PIR_General.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,124 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/format.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,124 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/INSD_INSDSeq.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,124 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/isobox.ent -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,124 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/GenBank_General.mod.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,125 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Entrez/DTDs/bookdoc_100301.dtd -> build/bdist.linux-armv8l/wheel/./Bio/Entrez/DTDs
2025-11-04 22:56:17,125 root INFO creating build/bdist.linux-armv8l/wheel/Bio/GenBank
2025-11-04 22:56:17,125 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/GenBank/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/GenBank
2025-11-04 22:56:17,125 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/GenBank/Record.py -> build/bdist.linux-armv8l/wheel/./Bio/GenBank
2025-11-04 22:56:17,126 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/GenBank/utils.py -> build/bdist.linux-armv8l/wheel/./Bio/GenBank
2025-11-04 22:56:17,126 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/GenBank/Scanner.py -> build/bdist.linux-armv8l/wheel/./Bio/GenBank
2025-11-04 22:56:17,126 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/py.typed -> build/bdist.linux-armv8l/wheel/./Bio
2025-11-04 22:56:17,126 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/NaiveBayes.py -> build/bdist.linux-armv8l/wheel/./Bio
2025-11-04 22:56:17,127 root INFO creating build/bdist.linux-armv8l/wheel/Bio/SeqIO
2025-11-04 22:56:17,127 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/SeqIO/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/SeqIO
2025-11-04 22:56:17,127 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/SeqIO/QualityIO.py -> build/bdist.linux-armv8l/wheel/./Bio/SeqIO
2025-11-04 22:56:17,127 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/SeqIO/_twoBitIO.cpython-312-arm-linux-musleabihf.so -> build/bdist.linux-armv8l/wheel/./Bio/SeqIO
2025-11-04 22:56:17,127 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/SeqIO/PhdIO.py -> build/bdist.linux-armv8l/wheel/./Bio/SeqIO
2025-11-04 22:56:17,128 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/SeqIO/SffIO.py -> build/bdist.linux-armv8l/wheel/./Bio/SeqIO
2025-11-04 22:56:17,128 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/SeqIO/_index.py -> build/bdist.linux-armv8l/wheel/./Bio/SeqIO
2025-11-04 22:56:17,128 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/SeqIO/Interfaces.py -> build/bdist.linux-armv8l/wheel/./Bio/SeqIO
2025-11-04 22:56:17,128 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/SeqIO/PirIO.py -> build/bdist.linux-armv8l/wheel/./Bio/SeqIO
2025-11-04 22:56:17,129 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/SeqIO/_twoBitIO.c -> build/bdist.linux-armv8l/wheel/./Bio/SeqIO
2025-11-04 22:56:17,129 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/SeqIO/SwissIO.py -> build/bdist.linux-armv8l/wheel/./Bio/SeqIO
2025-11-04 22:56:17,129 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/SeqIO/InsdcIO.py -> build/bdist.linux-armv8l/wheel/./Bio/SeqIO
2025-11-04 22:56:17,129 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/SeqIO/GfaIO.py -> build/bdist.linux-armv8l/wheel/./Bio/SeqIO
2025-11-04 22:56:17,130 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/SeqIO/IgIO.py -> build/bdist.linux-armv8l/wheel/./Bio/SeqIO
2025-11-04 22:56:17,130 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/SeqIO/XdnaIO.py -> build/bdist.linux-armv8l/wheel/./Bio/SeqIO
2025-11-04 22:56:17,130 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/SeqIO/AceIO.py -> build/bdist.linux-armv8l/wheel/./Bio/SeqIO
2025-11-04 22:56:17,130 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/SeqIO/AbiIO.py -> build/bdist.linux-armv8l/wheel/./Bio/SeqIO
2025-11-04 22:56:17,130 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/SeqIO/PdbIO.py -> build/bdist.linux-armv8l/wheel/./Bio/SeqIO
2025-11-04 22:56:17,131 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/SeqIO/UniprotIO.py -> build/bdist.linux-armv8l/wheel/./Bio/SeqIO
2025-11-04 22:56:17,131 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/SeqIO/SnapGeneIO.py -> build/bdist.linux-armv8l/wheel/./Bio/SeqIO
2025-11-04 22:56:17,131 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/SeqIO/TwoBitIO.py -> build/bdist.linux-armv8l/wheel/./Bio/SeqIO
2025-11-04 22:56:17,131 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/SeqIO/SeqXmlIO.py -> build/bdist.linux-armv8l/wheel/./Bio/SeqIO
2025-11-04 22:56:17,131 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/SeqIO/NibIO.py -> build/bdist.linux-armv8l/wheel/./Bio/SeqIO
2025-11-04 22:56:17,132 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/SeqIO/FastaIO.py -> build/bdist.linux-armv8l/wheel/./Bio/SeqIO
2025-11-04 22:56:17,132 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/SeqIO/GckIO.py -> build/bdist.linux-armv8l/wheel/./Bio/SeqIO
2025-11-04 22:56:17,132 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/SeqIO/TabIO.py -> build/bdist.linux-armv8l/wheel/./Bio/SeqIO
2025-11-04 22:56:17,132 root INFO creating build/bdist.linux-armv8l/wheel/Bio/Geo
2025-11-04 22:56:17,133 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Geo/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/Geo
2025-11-04 22:56:17,133 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Geo/Record.py -> build/bdist.linux-armv8l/wheel/./Bio/Geo
2025-11-04 22:56:17,133 root INFO creating build/bdist.linux-armv8l/wheel/Bio/Alphabet
2025-11-04 22:56:17,133 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Alphabet/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/Alphabet
2025-11-04 22:56:17,133 root INFO creating build/bdist.linux-armv8l/wheel/Bio/UniGene
2025-11-04 22:56:17,134 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/UniGene/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/UniGene
2025-11-04 22:56:17,134 root INFO creating build/bdist.linux-armv8l/wheel/Bio/Application
2025-11-04 22:56:17,134 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Application/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/Application
2025-11-04 22:56:17,134 root INFO creating build/bdist.linux-armv8l/wheel/Bio/Align
2025-11-04 22:56:17,135 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Align/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/Align
2025-11-04 22:56:17,135 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Align/_pairwisealigner.cpython-312-arm-linux-musleabihf.so -> build/bdist.linux-armv8l/wheel/./Bio/Align
2025-11-04 22:56:17,135 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Align/emboss.py -> build/bdist.linux-armv8l/wheel/./Bio/Align
2025-11-04 22:56:17,136 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Align/a2m.py -> build/bdist.linux-armv8l/wheel/./Bio/Align
2025-11-04 22:56:17,136 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Align/chain.py -> build/bdist.linux-armv8l/wheel/./Bio/Align
2025-11-04 22:56:17,136 root INFO creating build/bdist.linux-armv8l/wheel/Bio/Align/Applications
2025-11-04 22:56:17,136 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Align/Applications/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/Align/Applications
2025-11-04 22:56:17,136 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Align/Applications/_Clustalw.py -> build/bdist.linux-armv8l/wheel/./Bio/Align/Applications
2025-11-04 22:56:17,137 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Align/Applications/_TCoffee.py -> build/bdist.linux-armv8l/wheel/./Bio/Align/Applications
2025-11-04 22:56:17,137 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Align/Applications/_Mafft.py -> build/bdist.linux-armv8l/wheel/./Bio/Align/Applications
2025-11-04 22:56:17,137 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Align/Applications/_Muscle.py -> build/bdist.linux-armv8l/wheel/./Bio/Align/Applications
2025-11-04 22:56:17,137 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Align/Applications/_Probcons.py -> build/bdist.linux-armv8l/wheel/./Bio/Align/Applications
2025-11-04 22:56:17,137 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Align/Applications/_Prank.py -> build/bdist.linux-armv8l/wheel/./Bio/Align/Applications
2025-11-04 22:56:17,138 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Align/Applications/_MSAProbs.py -> build/bdist.linux-armv8l/wheel/./Bio/Align/Applications
2025-11-04 22:56:17,138 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Align/Applications/_ClustalOmega.py -> build/bdist.linux-armv8l/wheel/./Bio/Align/Applications
2025-11-04 22:56:17,138 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Align/Applications/_Dialign.py -> build/bdist.linux-armv8l/wheel/./Bio/Align/Applications
2025-11-04 22:56:17,138 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Align/bed.py -> build/bdist.linux-armv8l/wheel/./Bio/Align
2025-11-04 22:56:17,138 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Align/_pairwisealigner.c -> build/bdist.linux-armv8l/wheel/./Bio/Align
2025-11-04 22:56:17,139 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Align/psl.py -> build/bdist.linux-armv8l/wheel/./Bio/Align
2025-11-04 22:56:17,139 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Align/clustal.py -> build/bdist.linux-armv8l/wheel/./Bio/Align
2025-11-04 22:56:17,139 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Align/msf.py -> build/bdist.linux-armv8l/wheel/./Bio/Align
2025-11-04 22:56:17,139 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Align/tabular.py -> build/bdist.linux-armv8l/wheel/./Bio/Align
2025-11-04 22:56:17,140 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Align/bigpsl.py -> build/bdist.linux-armv8l/wheel/./Bio/Align
2025-11-04 22:56:17,140 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Align/_codonaligner.c -> build/bdist.linux-armv8l/wheel/./Bio/Align
2025-11-04 22:56:17,140 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Align/phylip.py -> build/bdist.linux-armv8l/wheel/./Bio/Align
2025-11-04 22:56:17,140 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Align/exonerate.py -> build/bdist.linux-armv8l/wheel/./Bio/Align
2025-11-04 22:56:17,141 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Align/fasta.py -> build/bdist.linux-armv8l/wheel/./Bio/Align
2025-11-04 22:56:17,141 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Align/sam.py -> build/bdist.linux-armv8l/wheel/./Bio/Align
2025-11-04 22:56:17,141 root INFO creating build/bdist.linux-armv8l/wheel/Bio/Align/substitution_matrices
2025-11-04 22:56:17,141 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Align/substitution_matrices/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/Align/substitution_matrices
2025-11-04 22:56:17,141 root INFO creating build/bdist.linux-armv8l/wheel/Bio/Align/substitution_matrices/data
2025-11-04 22:56:17,142 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Align/substitution_matrices/data/MEGABLAST -> build/bdist.linux-armv8l/wheel/./Bio/Align/substitution_matrices/data
2025-11-04 22:56:17,142 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Align/substitution_matrices/data/BLOSUM90 -> build/bdist.linux-armv8l/wheel/./Bio/Align/substitution_matrices/data
2025-11-04 22:56:17,142 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Align/substitution_matrices/data/HOXD70 -> build/bdist.linux-armv8l/wheel/./Bio/Align/substitution_matrices/data
2025-11-04 22:56:17,142 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Align/substitution_matrices/data/PAM70 -> build/bdist.linux-armv8l/wheel/./Bio/Align/substitution_matrices/data
2025-11-04 22:56:17,142 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Align/substitution_matrices/data/RAO -> build/bdist.linux-armv8l/wheel/./Bio/Align/substitution_matrices/data
2025-11-04 22:56:17,143 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Align/substitution_matrices/data/PAM30 -> build/bdist.linux-armv8l/wheel/./Bio/Align/substitution_matrices/data
2025-11-04 22:56:17,143 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Align/substitution_matrices/data/BENNER22 -> build/bdist.linux-armv8l/wheel/./Bio/Align/substitution_matrices/data
2025-11-04 22:56:17,143 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Align/substitution_matrices/data/MCLACHLAN -> build/bdist.linux-armv8l/wheel/./Bio/Align/substitution_matrices/data
2025-11-04 22:56:17,143 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Align/substitution_matrices/data/PAM250 -> build/bdist.linux-armv8l/wheel/./Bio/Align/substitution_matrices/data
2025-11-04 22:56:17,143 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Align/substitution_matrices/data/NUC.4.4 -> build/bdist.linux-armv8l/wheel/./Bio/Align/substitution_matrices/data
2025-11-04 22:56:17,143 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Align/substitution_matrices/data/BENNER74 -> build/bdist.linux-armv8l/wheel/./Bio/Align/substitution_matrices/data
2025-11-04 22:56:17,144 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Align/substitution_matrices/data/JONES -> build/bdist.linux-armv8l/wheel/./Bio/Align/substitution_matrices/data
2025-11-04 22:56:17,144 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Align/substitution_matrices/data/BLOSUM50 -> build/bdist.linux-armv8l/wheel/./Bio/Align/substitution_matrices/data
2025-11-04 22:56:17,144 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Align/substitution_matrices/data/BLASTN -> build/bdist.linux-armv8l/wheel/./Bio/Align/substitution_matrices/data
2025-11-04 22:56:17,144 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Align/substitution_matrices/data/LEVIN -> build/bdist.linux-armv8l/wheel/./Bio/Align/substitution_matrices/data
2025-11-04 22:56:17,144 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Align/substitution_matrices/data/BLOSUM80 -> build/bdist.linux-armv8l/wheel/./Bio/Align/substitution_matrices/data
2025-11-04 22:56:17,144 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Align/substitution_matrices/data/DAYHOFF -> build/bdist.linux-armv8l/wheel/./Bio/Align/substitution_matrices/data
2025-11-04 22:56:17,145 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Align/substitution_matrices/data/JOHNSON -> build/bdist.linux-armv8l/wheel/./Bio/Align/substitution_matrices/data
2025-11-04 22:56:17,145 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Align/substitution_matrices/data/STR -> build/bdist.linux-armv8l/wheel/./Bio/Align/substitution_matrices/data
2025-11-04 22:56:17,145 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Align/substitution_matrices/data/FENG -> build/bdist.linux-armv8l/wheel/./Bio/Align/substitution_matrices/data
2025-11-04 22:56:17,145 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Align/substitution_matrices/data/MDM78 -> build/bdist.linux-armv8l/wheel/./Bio/Align/substitution_matrices/data
2025-11-04 22:56:17,145 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Align/substitution_matrices/data/RISLER -> build/bdist.linux-armv8l/wheel/./Bio/Align/substitution_matrices/data
2025-11-04 22:56:17,145 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Align/substitution_matrices/data/SCHNEIDER -> build/bdist.linux-armv8l/wheel/./Bio/Align/substitution_matrices/data
2025-11-04 22:56:17,146 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Align/substitution_matrices/data/TRANS -> build/bdist.linux-armv8l/wheel/./Bio/Align/substitution_matrices/data
2025-11-04 22:56:17,146 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Align/substitution_matrices/data/GONNET1992 -> build/bdist.linux-armv8l/wheel/./Bio/Align/substitution_matrices/data
2025-11-04 22:56:17,146 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Align/substitution_matrices/data/BLOSUM62 -> build/bdist.linux-armv8l/wheel/./Bio/Align/substitution_matrices/data
2025-11-04 22:56:17,146 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Align/substitution_matrices/data/BLASTP -> build/bdist.linux-armv8l/wheel/./Bio/Align/substitution_matrices/data
2025-11-04 22:56:17,146 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Align/substitution_matrices/data/BLOSUM45 -> build/bdist.linux-armv8l/wheel/./Bio/Align/substitution_matrices/data
2025-11-04 22:56:17,147 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Align/substitution_matrices/data/BENNER6 -> build/bdist.linux-armv8l/wheel/./Bio/Align/substitution_matrices/data
2025-11-04 22:56:17,147 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Align/substitution_matrices/data/GENETIC -> build/bdist.linux-armv8l/wheel/./Bio/Align/substitution_matrices/data
2025-11-04 22:56:17,147 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Align/AlignInfo.py -> build/bdist.linux-armv8l/wheel/./Bio/Align
2025-11-04 22:56:17,147 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Align/stockholm.py -> build/bdist.linux-armv8l/wheel/./Bio/Align
2025-11-04 22:56:17,147 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Align/maf.py -> build/bdist.linux-armv8l/wheel/./Bio/Align
2025-11-04 22:56:17,148 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Align/_codonaligner.cpython-312-arm-linux-musleabihf.so -> build/bdist.linux-armv8l/wheel/./Bio/Align
2025-11-04 22:56:17,148 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Align/mauve.py -> build/bdist.linux-armv8l/wheel/./Bio/Align
2025-11-04 22:56:17,148 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Align/nexus.py -> build/bdist.linux-armv8l/wheel/./Bio/Align
2025-11-04 22:56:17,148 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Align/bigmaf.py -> build/bdist.linux-armv8l/wheel/./Bio/Align
2025-11-04 22:56:17,148 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Align/hhr.py -> build/bdist.linux-armv8l/wheel/./Bio/Align
2025-11-04 22:56:17,149 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Align/interfaces.py -> build/bdist.linux-armv8l/wheel/./Bio/Align
2025-11-04 22:56:17,149 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Align/analysis.py -> build/bdist.linux-armv8l/wheel/./Bio/Align
2025-11-04 22:56:17,149 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Align/_aligncore.c -> build/bdist.linux-armv8l/wheel/./Bio/Align
2025-11-04 22:56:17,149 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Align/bigbed.py -> build/bdist.linux-armv8l/wheel/./Bio/Align
2025-11-04 22:56:17,149 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/Align/_aligncore.cpython-312-arm-linux-musleabihf.so -> build/bdist.linux-armv8l/wheel/./Bio/Align
2025-11-04 22:56:17,150 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/pairwise2.py -> build/bdist.linux-armv8l/wheel/./Bio
2025-11-04 22:56:17,150 root INFO creating build/bdist.linux-armv8l/wheel/Bio/ExPASy
2025-11-04 22:56:17,150 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/ExPASy/__init__.py -> build/bdist.linux-armv8l/wheel/./Bio/ExPASy
2025-11-04 22:56:17,150 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/ExPASy/Prosite.py -> build/bdist.linux-armv8l/wheel/./Bio/ExPASy
2025-11-04 22:56:17,151 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/ExPASy/ScanProsite.py -> build/bdist.linux-armv8l/wheel/./Bio/ExPASy
2025-11-04 22:56:17,151 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/ExPASy/Prodoc.py -> build/bdist.linux-armv8l/wheel/./Bio/ExPASy
2025-11-04 22:56:17,151 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/ExPASy/Enzyme.py -> build/bdist.linux-armv8l/wheel/./Bio/ExPASy
2025-11-04 22:56:17,151 root INFO copying build/lib.linux-armv8l-cpython-312/Bio/ExPASy/cellosaurus.py -> build/bdist.linux-armv8l/wheel/./Bio/ExPASy
2025-11-04 22:56:17,151 root INFO running install_egg_info
2025-11-04 22:56:17,155 root INFO Copying biopython.egg-info to build/bdist.linux-armv8l/wheel/./biopython-1.85-py3.12.egg-info
2025-11-04 22:56:17,156 root INFO running install_scripts
2025-11-04 22:56:17,164 root INFO creating build/bdist.linux-armv8l/wheel/biopython-1.85.dist-info/WHEEL
2025-11-04 22:56:17,164 wheel INFO creating '/home/buildozer/aports/community/py3-biopython/src/biopython-1.85/.dist/.tmp-tbovam04/biopython-1.85-cp312-cp312-linux_armv8l.whl' and adding 'build/bdist.linux-armv8l/wheel' to it
2025-11-04 22:56:17,164 wheel INFO adding 'Bio/File.py'
2025-11-04 22:56:17,165 wheel INFO adding 'Bio/LogisticRegression.py'
2025-11-04 22:56:17,165 wheel INFO adding 'Bio/MarkovModel.py'
2025-11-04 22:56:17,165 wheel INFO adding 'Bio/MaxEntropy.py'
2025-11-04 22:56:17,166 wheel INFO adding 'Bio/NaiveBayes.py'
2025-11-04 22:56:17,166 wheel INFO adding 'Bio/Seq.py'
2025-11-04 22:56:17,167 wheel INFO adding 'Bio/SeqFeature.py'
2025-11-04 22:56:17,168 wheel INFO adding 'Bio/SeqRecord.py'
2025-11-04 22:56:17,168 wheel INFO adding 'Bio/__init__.py'
2025-11-04 22:56:17,168 wheel INFO adding 'Bio/_utils.py'
2025-11-04 22:56:17,169 wheel INFO adding 'Bio/bgzf.py'
2025-11-04 22:56:17,169 wheel INFO adding 'Bio/cpairwise2.cpython-312-arm-linux-musleabihf.so'
2025-11-04 22:56:17,169 wheel INFO adding 'Bio/cpairwise2module.c'
2025-11-04 22:56:17,170 wheel INFO adding 'Bio/kNN.py'
2025-11-04 22:56:17,170 wheel INFO adding 'Bio/pairwise2.py'
2025-11-04 22:56:17,170 wheel INFO adding 'Bio/py.typed'
2025-11-04 22:56:17,171 wheel INFO adding 'Bio/Affy/CelFile.py'
2025-11-04 22:56:17,171 wheel INFO adding 'Bio/Affy/__init__.py'
2025-11-04 22:56:17,172 wheel INFO adding 'Bio/Align/AlignInfo.py'
2025-11-04 22:56:17,172 wheel INFO adding 'Bio/Align/__init__.py'
2025-11-04 22:56:17,173 wheel INFO adding 'Bio/Align/_aligncore.c'
2025-11-04 22:56:17,173 wheel INFO adding 'Bio/Align/_aligncore.cpython-312-arm-linux-musleabihf.so'
2025-11-04 22:56:17,174 wheel INFO adding 'Bio/Align/_codonaligner.c'
2025-11-04 22:56:17,174 wheel INFO adding 'Bio/Align/_codonaligner.cpython-312-arm-linux-musleabihf.so'
2025-11-04 22:56:17,175 wheel INFO adding 'Bio/Align/_pairwisealigner.c'
2025-11-04 22:56:17,177 wheel INFO adding 'Bio/Align/_pairwisealigner.cpython-312-arm-linux-musleabihf.so'
2025-11-04 22:56:17,177 wheel INFO adding 'Bio/Align/a2m.py'
2025-11-04 22:56:17,178 wheel INFO adding 'Bio/Align/analysis.py'
2025-11-04 22:56:17,178 wheel INFO adding 'Bio/Align/bed.py'
2025-11-04 22:56:17,179 wheel INFO adding 'Bio/Align/bigbed.py'
2025-11-04 22:56:17,179 wheel INFO adding 'Bio/Align/bigmaf.py'
2025-11-04 22:56:17,179 wheel INFO adding 'Bio/Align/bigpsl.py'
2025-11-04 22:56:17,180 wheel INFO adding 'Bio/Align/chain.py'
2025-11-04 22:56:17,180 wheel INFO adding 'Bio/Align/clustal.py'
2025-11-04 22:56:17,180 wheel INFO adding 'Bio/Align/emboss.py'
2025-11-04 22:56:17,180 wheel INFO adding 'Bio/Align/exonerate.py'
2025-11-04 22:56:17,181 wheel INFO adding 'Bio/Align/fasta.py'
2025-11-04 22:56:17,181 wheel INFO adding 'Bio/Align/hhr.py'
2025-11-04 22:56:17,181 wheel INFO adding 'Bio/Align/interfaces.py'
2025-11-04 22:56:17,182 wheel INFO adding 'Bio/Align/maf.py'
2025-11-04 22:56:17,182 wheel INFO adding 'Bio/Align/mauve.py'
2025-11-04 22:56:17,182 wheel INFO adding 'Bio/Align/msf.py'
2025-11-04 22:56:17,182 wheel INFO adding 'Bio/Align/nexus.py'
2025-11-04 22:56:17,183 wheel INFO adding 'Bio/Align/phylip.py'
2025-11-04 22:56:17,183 wheel INFO adding 'Bio/Align/psl.py'
2025-11-04 22:56:17,183 wheel INFO adding 'Bio/Align/sam.py'
2025-11-04 22:56:17,184 wheel INFO adding 'Bio/Align/stockholm.py'
2025-11-04 22:56:17,184 wheel INFO adding 'Bio/Align/tabular.py'
2025-11-04 22:56:17,184 wheel INFO adding 'Bio/Align/Applications/_ClustalOmega.py'
2025-11-04 22:56:17,185 wheel INFO adding 'Bio/Align/Applications/_Clustalw.py'
2025-11-04 22:56:17,185 wheel INFO adding 'Bio/Align/Applications/_Dialign.py'
2025-11-04 22:56:17,185 wheel INFO adding 'Bio/Align/Applications/_MSAProbs.py'
2025-11-04 22:56:17,185 wheel INFO adding 'Bio/Align/Applications/_Mafft.py'
2025-11-04 22:56:17,186 wheel INFO adding 'Bio/Align/Applications/_Muscle.py'
2025-11-04 22:56:17,186 wheel INFO adding 'Bio/Align/Applications/_Prank.py'
2025-11-04 22:56:17,186 wheel INFO adding 'Bio/Align/Applications/_Probcons.py'
2025-11-04 22:56:17,187 wheel INFO adding 'Bio/Align/Applications/_TCoffee.py'
2025-11-04 22:56:17,187 wheel INFO adding 'Bio/Align/Applications/__init__.py'
2025-11-04 22:56:17,187 wheel INFO adding 'Bio/Align/substitution_matrices/__init__.py'
2025-11-04 22:56:17,187 wheel INFO adding 'Bio/Align/substitution_matrices/data/BENNER22'
2025-11-04 22:56:17,188 wheel INFO adding 'Bio/Align/substitution_matrices/data/BENNER6'
2025-11-04 22:56:17,188 wheel INFO adding 'Bio/Align/substitution_matrices/data/BENNER74'
2025-11-04 22:56:17,188 wheel INFO adding 'Bio/Align/substitution_matrices/data/BLASTN'
2025-11-04 22:56:17,188 wheel INFO adding 'Bio/Align/substitution_matrices/data/BLASTP'
2025-11-04 22:56:17,188 wheel INFO adding 'Bio/Align/substitution_matrices/data/BLOSUM45'
2025-11-04 22:56:17,189 wheel INFO adding 'Bio/Align/substitution_matrices/data/BLOSUM50'
2025-11-04 22:56:17,189 wheel INFO adding 'Bio/Align/substitution_matrices/data/BLOSUM62'
2025-11-04 22:56:17,189 wheel INFO adding 'Bio/Align/substitution_matrices/data/BLOSUM80'
2025-11-04 22:56:17,189 wheel INFO adding 'Bio/Align/substitution_matrices/data/BLOSUM90'
2025-11-04 22:56:17,189 wheel INFO adding 'Bio/Align/substitution_matrices/data/DAYHOFF'
2025-11-04 22:56:17,189 wheel INFO adding 'Bio/Align/substitution_matrices/data/FENG'
2025-11-04 22:56:17,190 wheel INFO adding 'Bio/Align/substitution_matrices/data/GENETIC'
2025-11-04 22:56:17,190 wheel INFO adding 'Bio/Align/substitution_matrices/data/GONNET1992'
2025-11-04 22:56:17,190 wheel INFO adding 'Bio/Align/substitution_matrices/data/HOXD70'
2025-11-04 22:56:17,190 wheel INFO adding 'Bio/Align/substitution_matrices/data/JOHNSON'
2025-11-04 22:56:17,190 wheel INFO adding 'Bio/Align/substitution_matrices/data/JONES'
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2025-11-04 22:56:17,331 wheel INFO adding 'Bio/PopGen/GenePop/EasyController.py'
2025-11-04 22:56:17,331 wheel INFO adding 'Bio/PopGen/GenePop/FileParser.py'
2025-11-04 22:56:17,331 wheel INFO adding 'Bio/PopGen/GenePop/LargeFileParser.py'
2025-11-04 22:56:17,331 wheel INFO adding 'Bio/PopGen/GenePop/__init__.py'
2025-11-04 22:56:17,332 wheel INFO adding 'Bio/Restriction/PrintFormat.py'
2025-11-04 22:56:17,332 wheel INFO adding 'Bio/Restriction/Restriction.py'
2025-11-04 22:56:17,334 wheel INFO adding 'Bio/Restriction/Restriction_Dictionary.py'
2025-11-04 22:56:17,336 wheel INFO adding 'Bio/Restriction/__init__.py'
2025-11-04 22:56:17,336 wheel INFO adding 'Bio/SCOP/Cla.py'
2025-11-04 22:56:17,336 wheel INFO adding 'Bio/SCOP/Des.py'
2025-11-04 22:56:17,337 wheel INFO adding 'Bio/SCOP/Dom.py'
2025-11-04 22:56:17,337 wheel INFO adding 'Bio/SCOP/Hie.py'
2025-11-04 22:56:17,337 wheel INFO adding 'Bio/SCOP/Raf.py'
2025-11-04 22:56:17,337 wheel INFO adding 'Bio/SCOP/Residues.py'
2025-11-04 22:56:17,337 wheel INFO adding 'Bio/SCOP/__init__.py'
2025-11-04 22:56:17,338 wheel INFO adding 'Bio/SVDSuperimposer/__init__.py'
2025-11-04 22:56:17,338 wheel INFO adding 'Bio/SearchIO/BlatIO.py'
2025-11-04 22:56:17,339 wheel INFO adding 'Bio/SearchIO/FastaIO.py'
2025-11-04 22:56:17,339 wheel INFO adding 'Bio/SearchIO/__init__.py'
2025-11-04 22:56:17,339 wheel INFO adding 'Bio/SearchIO/_index.py'
2025-11-04 22:56:17,340 wheel INFO adding 'Bio/SearchIO/_utils.py'
2025-11-04 22:56:17,340 wheel INFO adding 'Bio/SearchIO/BlastIO/__init__.py'
2025-11-04 22:56:17,340 wheel INFO adding 'Bio/SearchIO/BlastIO/blast_tab.py'
2025-11-04 22:56:17,341 wheel INFO adding 'Bio/SearchIO/BlastIO/blast_xml.py'
2025-11-04 22:56:17,341 wheel INFO adding 'Bio/SearchIO/ExonerateIO/__init__.py'
2025-11-04 22:56:17,341 wheel INFO adding 'Bio/SearchIO/ExonerateIO/_base.py'
2025-11-04 22:56:17,342 wheel INFO adding 'Bio/SearchIO/ExonerateIO/exonerate_cigar.py'
2025-11-04 22:56:17,342 wheel INFO adding 'Bio/SearchIO/ExonerateIO/exonerate_text.py'
2025-11-04 22:56:17,342 wheel INFO adding 'Bio/SearchIO/ExonerateIO/exonerate_vulgar.py'
2025-11-04 22:56:17,342 wheel INFO adding 'Bio/SearchIO/HHsuiteIO/__init__.py'
2025-11-04 22:56:17,343 wheel INFO adding 'Bio/SearchIO/HHsuiteIO/hhsuite2_text.py'
2025-11-04 22:56:17,343 wheel INFO adding 'Bio/SearchIO/HmmerIO/__init__.py'
2025-11-04 22:56:17,343 wheel INFO adding 'Bio/SearchIO/HmmerIO/_base.py'
2025-11-04 22:56:17,343 wheel INFO adding 'Bio/SearchIO/HmmerIO/hmmer2_text.py'
2025-11-04 22:56:17,344 wheel INFO adding 'Bio/SearchIO/HmmerIO/hmmer3_domtab.py'
2025-11-04 22:56:17,344 wheel INFO adding 'Bio/SearchIO/HmmerIO/hmmer3_tab.py'
2025-11-04 22:56:17,344 wheel INFO adding 'Bio/SearchIO/HmmerIO/hmmer3_text.py'
2025-11-04 22:56:17,345 wheel INFO adding 'Bio/SearchIO/InterproscanIO/__init__.py'
2025-11-04 22:56:17,345 wheel INFO adding 'Bio/SearchIO/InterproscanIO/interproscan_xml.py'
2025-11-04 22:56:17,345 wheel INFO adding 'Bio/SearchIO/_model/__init__.py'
2025-11-04 22:56:17,345 wheel INFO adding 'Bio/SearchIO/_model/_base.py'
2025-11-04 22:56:17,346 wheel INFO adding 'Bio/SearchIO/_model/hit.py'
2025-11-04 22:56:17,346 wheel INFO adding 'Bio/SearchIO/_model/hsp.py'
2025-11-04 22:56:17,346 wheel INFO adding 'Bio/SearchIO/_model/query.py'
2025-11-04 22:56:17,347 wheel INFO adding 'Bio/SeqIO/AbiIO.py'
2025-11-04 22:56:17,347 wheel INFO adding 'Bio/SeqIO/AceIO.py'
2025-11-04 22:56:17,347 wheel INFO adding 'Bio/SeqIO/FastaIO.py'
2025-11-04 22:56:17,348 wheel INFO adding 'Bio/SeqIO/GckIO.py'
2025-11-04 22:56:17,348 wheel INFO adding 'Bio/SeqIO/GfaIO.py'
2025-11-04 22:56:17,348 wheel INFO adding 'Bio/SeqIO/IgIO.py'
2025-11-04 22:56:17,349 wheel INFO adding 'Bio/SeqIO/InsdcIO.py'
2025-11-04 22:56:17,349 wheel INFO adding 'Bio/SeqIO/Interfaces.py'
2025-11-04 22:56:17,349 wheel INFO adding 'Bio/SeqIO/NibIO.py'
2025-11-04 22:56:17,350 wheel INFO adding 'Bio/SeqIO/PdbIO.py'
2025-11-04 22:56:17,350 wheel INFO adding 'Bio/SeqIO/PhdIO.py'
2025-11-04 22:56:17,350 wheel INFO adding 'Bio/SeqIO/PirIO.py'
2025-11-04 22:56:17,350 wheel INFO adding 'Bio/SeqIO/QualityIO.py'
2025-11-04 22:56:17,351 wheel INFO adding 'Bio/SeqIO/SeqXmlIO.py'
2025-11-04 22:56:17,352 wheel INFO adding 'Bio/SeqIO/SffIO.py'
2025-11-04 22:56:17,352 wheel INFO adding 'Bio/SeqIO/SnapGeneIO.py'
2025-11-04 22:56:17,352 wheel INFO adding 'Bio/SeqIO/SwissIO.py'
2025-11-04 22:56:17,353 wheel INFO adding 'Bio/SeqIO/TabIO.py'
2025-11-04 22:56:17,353 wheel INFO adding 'Bio/SeqIO/TwoBitIO.py'
2025-11-04 22:56:17,353 wheel INFO adding 'Bio/SeqIO/UniprotIO.py'
2025-11-04 22:56:17,353 wheel INFO adding 'Bio/SeqIO/XdnaIO.py'
2025-11-04 22:56:17,354 wheel INFO adding 'Bio/SeqIO/__init__.py'
2025-11-04 22:56:17,354 wheel INFO adding 'Bio/SeqIO/_index.py'
2025-11-04 22:56:17,354 wheel INFO adding 'Bio/SeqIO/_twoBitIO.c'
2025-11-04 22:56:17,355 wheel INFO adding 'Bio/SeqIO/_twoBitIO.cpython-312-arm-linux-musleabihf.so'
2025-11-04 22:56:17,355 wheel INFO adding 'Bio/SeqUtils/CheckSum.py'
2025-11-04 22:56:17,355 wheel INFO adding 'Bio/SeqUtils/IsoelectricPoint.py'
2025-11-04 22:56:17,356 wheel INFO adding 'Bio/SeqUtils/MeltingTemp.py'
2025-11-04 22:56:17,356 wheel INFO adding 'Bio/SeqUtils/ProtParam.py'
2025-11-04 22:56:17,356 wheel INFO adding 'Bio/SeqUtils/ProtParamData.py'
2025-11-04 22:56:17,357 wheel INFO adding 'Bio/SeqUtils/__init__.py'
2025-11-04 22:56:17,357 wheel INFO adding 'Bio/SeqUtils/lcc.py'
2025-11-04 22:56:17,357 wheel INFO adding 'Bio/Sequencing/Ace.py'
2025-11-04 22:56:17,358 wheel INFO adding 'Bio/Sequencing/Phd.py'
2025-11-04 22:56:17,358 wheel INFO adding 'Bio/Sequencing/__init__.py'
2025-11-04 22:56:17,358 wheel INFO adding 'Bio/Sequencing/Applications/_Novoalign.py'
2025-11-04 22:56:17,358 wheel INFO adding 'Bio/Sequencing/Applications/__init__.py'
2025-11-04 22:56:17,359 wheel INFO adding 'Bio/Sequencing/Applications/_bwa.py'
2025-11-04 22:56:17,359 wheel INFO adding 'Bio/Sequencing/Applications/_samtools.py'
2025-11-04 22:56:17,359 wheel INFO adding 'Bio/SwissProt/KeyWList.py'
2025-11-04 22:56:17,360 wheel INFO adding 'Bio/SwissProt/__init__.py'
2025-11-04 22:56:17,360 wheel INFO adding 'Bio/TogoWS/__init__.py'
2025-11-04 22:56:17,360 wheel INFO adding 'Bio/UniGene/__init__.py'
2025-11-04 22:56:17,361 wheel INFO adding 'Bio/UniProt/GOA.py'
2025-11-04 22:56:17,361 wheel INFO adding 'Bio/UniProt/__init__.py'
2025-11-04 22:56:17,361 wheel INFO adding 'Bio/codonalign/__init__.py'
2025-11-04 22:56:17,362 wheel INFO adding 'Bio/codonalign/codonalignment.py'
2025-11-04 22:56:17,362 wheel INFO adding 'Bio/codonalign/codonseq.py'
2025-11-04 22:56:17,363 wheel INFO adding 'Bio/motifs/__init__.py'
2025-11-04 22:56:17,363 wheel INFO adding 'Bio/motifs/_pwm.c'
2025-11-04 22:56:17,363 wheel INFO adding 'Bio/motifs/_pwm.cpython-312-arm-linux-musleabihf.so'
2025-11-04 22:56:17,363 wheel INFO adding 'Bio/motifs/alignace.py'
2025-11-04 22:56:17,364 wheel INFO adding 'Bio/motifs/clusterbuster.py'
2025-11-04 22:56:17,364 wheel INFO adding 'Bio/motifs/mast.py'
2025-11-04 22:56:17,364 wheel INFO adding 'Bio/motifs/matrix.py'
2025-11-04 22:56:17,364 wheel INFO adding 'Bio/motifs/meme.py'
2025-11-04 22:56:17,365 wheel INFO adding 'Bio/motifs/minimal.py'
2025-11-04 22:56:17,365 wheel INFO adding 'Bio/motifs/pfm.py'
2025-11-04 22:56:17,365 wheel INFO adding 'Bio/motifs/thresholds.py'
2025-11-04 22:56:17,365 wheel INFO adding 'Bio/motifs/transfac.py'
2025-11-04 22:56:17,366 wheel INFO adding 'Bio/motifs/xms.py'
2025-11-04 22:56:17,366 wheel INFO adding 'Bio/motifs/applications/__init__.py'
2025-11-04 22:56:17,366 wheel INFO adding 'Bio/motifs/applications/_xxmotif.py'
2025-11-04 22:56:17,366 wheel INFO adding 'Bio/motifs/jaspar/__init__.py'
2025-11-04 22:56:17,367 wheel INFO adding 'Bio/motifs/jaspar/db.py'
2025-11-04 22:56:17,367 wheel INFO adding 'Bio/phenotype/__init__.py'
2025-11-04 22:56:17,367 wheel INFO adding 'Bio/phenotype/phen_micro.py'
2025-11-04 22:56:17,368 wheel INFO adding 'Bio/phenotype/pm_fitting.py'
2025-11-04 22:56:17,368 wheel INFO adding 'BioSQL/BioSeq.py'
2025-11-04 22:56:17,368 wheel INFO adding 'BioSQL/BioSeqDatabase.py'
2025-11-04 22:56:17,369 wheel INFO adding 'BioSQL/DBUtils.py'
2025-11-04 22:56:17,369 wheel INFO adding 'BioSQL/Loader.py'
2025-11-04 22:56:17,369 wheel INFO adding 'BioSQL/__init__.py'
2025-11-04 22:56:17,370 wheel INFO adding 'BioSQL/py.typed'
2025-11-04 22:56:17,370 wheel INFO adding 'biopython-1.85.dist-info/licenses/LICENSE'
2025-11-04 22:56:17,370 wheel INFO adding 'biopython-1.85.dist-info/licenses/LICENSE.rst'
2025-11-04 22:56:17,370 wheel INFO adding 'biopython-1.85.dist-info/METADATA'
2025-11-04 22:56:17,371 wheel INFO adding 'biopython-1.85.dist-info/WHEEL'
2025-11-04 22:56:17,371 wheel INFO adding 'biopython-1.85.dist-info/top_level.txt'
2025-11-04 22:56:17,373 wheel INFO adding 'biopython-1.85.dist-info/RECORD'
2025-11-04 22:56:17,376 root INFO removing build/bdist.linux-armv8l/wheel
2025-11-04 22:56:17,391 gpep517 INFO The backend produced .dist/biopython-1.85-cp312-cp312-linux_armv8l.whl
biopython-1.85-cp312-cp312-linux_armv8l.whl
>>> py3-biopython: Entering fakeroot...
>>> py3-biopython-pyc*: Running split function pyc...
'usr/lib/python3.12/site-packages/BioSQL/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/BioSQL/__pycache__'
'usr/lib/python3.12/site-packages/Bio/HMM/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/HMM/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Phylo/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Phylo/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Phylo/Applications/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Phylo/Applications/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Phylo/PAML/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Phylo/PAML/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Restriction/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Restriction/__pycache__'
'usr/lib/python3.12/site-packages/Bio/AlignIO/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/AlignIO/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Compass/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Compass/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Nexus/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Nexus/__pycache__'
'usr/lib/python3.12/site-packages/Bio/codonalign/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/codonalign/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Cluster/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Cluster/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Graphics/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Graphics/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Graphics/GenomeDiagram/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Graphics/GenomeDiagram/__pycache__'
'usr/lib/python3.12/site-packages/Bio/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Sequencing/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Sequencing/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Sequencing/Applications/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Sequencing/Applications/__pycache__'
'usr/lib/python3.12/site-packages/Bio/KEGG/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/KEGG/__pycache__'
'usr/lib/python3.12/site-packages/Bio/KEGG/Gene/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/KEGG/Gene/__pycache__'
'usr/lib/python3.12/site-packages/Bio/KEGG/KGML/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/KEGG/KGML/__pycache__'
'usr/lib/python3.12/site-packages/Bio/KEGG/Map/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/KEGG/Map/__pycache__'
'usr/lib/python3.12/site-packages/Bio/KEGG/Compound/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/KEGG/Compound/__pycache__'
'usr/lib/python3.12/site-packages/Bio/KEGG/Enzyme/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/KEGG/Enzyme/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Pathway/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Pathway/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Pathway/Rep/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Pathway/Rep/__pycache__'
'usr/lib/python3.12/site-packages/Bio/SCOP/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/SCOP/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Data/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Data/__pycache__'
'usr/lib/python3.12/site-packages/Bio/TogoWS/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/TogoWS/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Medline/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Medline/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Blast/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Blast/__pycache__'
'usr/lib/python3.12/site-packages/Bio/PopGen/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/PopGen/__pycache__'
'usr/lib/python3.12/site-packages/Bio/PopGen/GenePop/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/PopGen/GenePop/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Emboss/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Emboss/__pycache__'
'usr/lib/python3.12/site-packages/Bio/SwissProt/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/SwissProt/__pycache__'
'usr/lib/python3.12/site-packages/Bio/UniProt/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/UniProt/__pycache__'
'usr/lib/python3.12/site-packages/Bio/SearchIO/HHsuiteIO/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/SearchIO/HHsuiteIO/__pycache__'
'usr/lib/python3.12/site-packages/Bio/SearchIO/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/SearchIO/__pycache__'
'usr/lib/python3.12/site-packages/Bio/SearchIO/BlastIO/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/SearchIO/BlastIO/__pycache__'
'usr/lib/python3.12/site-packages/Bio/SearchIO/_model/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/SearchIO/_model/__pycache__'
'usr/lib/python3.12/site-packages/Bio/SearchIO/ExonerateIO/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/SearchIO/ExonerateIO/__pycache__'
'usr/lib/python3.12/site-packages/Bio/SearchIO/HmmerIO/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/SearchIO/HmmerIO/__pycache__'
'usr/lib/python3.12/site-packages/Bio/SearchIO/InterproscanIO/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/SearchIO/InterproscanIO/__pycache__'
'usr/lib/python3.12/site-packages/Bio/CAPS/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/CAPS/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Affy/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Affy/__pycache__'
'usr/lib/python3.12/site-packages/Bio/SVDSuperimposer/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/SVDSuperimposer/__pycache__'
'usr/lib/python3.12/site-packages/Bio/SeqUtils/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/SeqUtils/__pycache__'
'usr/lib/python3.12/site-packages/Bio/motifs/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/motifs/__pycache__'
'usr/lib/python3.12/site-packages/Bio/motifs/jaspar/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/motifs/jaspar/__pycache__'
'usr/lib/python3.12/site-packages/Bio/motifs/applications/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/motifs/applications/__pycache__'
'usr/lib/python3.12/site-packages/Bio/phenotype/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/phenotype/__pycache__'
'usr/lib/python3.12/site-packages/Bio/NMR/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/NMR/__pycache__'
'usr/lib/python3.12/site-packages/Bio/PDB/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/PDB/__pycache__'
'usr/lib/python3.12/site-packages/Bio/PDB/mmtf/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/PDB/mmtf/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Entrez/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Entrez/__pycache__'
'usr/lib/python3.12/site-packages/Bio/GenBank/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/GenBank/__pycache__'
'usr/lib/python3.12/site-packages/Bio/SeqIO/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/SeqIO/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Geo/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Geo/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Alphabet/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Alphabet/__pycache__'
'usr/lib/python3.12/site-packages/Bio/UniGene/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/UniGene/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Application/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Application/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Align/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Align/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Align/Applications/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Align/Applications/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Align/substitution_matrices/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Align/substitution_matrices/__pycache__'
'usr/lib/python3.12/site-packages/Bio/ExPASy/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/ExPASy/__pycache__'
>>> py3-biopython-pyc*: Preparing subpackage py3-biopython-pyc...
>>> py3-biopython-pyc*: Running postcheck for py3-biopython-pyc
>>> py3-biopython*: Running postcheck for py3-biopython
>>> py3-biopython*: Preparing package py3-biopython...
>>> py3-biopython*: Stripping binaries
>>> py3-biopython*: Scanning shared objects
>>> py3-biopython-pyc*: Tracing dependencies...
	python3~3.12
>>> py3-biopython-pyc*: Package size: 6.4 MB
>>> py3-biopython-pyc*: Compressing data...
>>> py3-biopython-pyc*: Create checksum...
>>> py3-biopython-pyc*: Create py3-biopython-pyc-1.85-r0.apk
>>> py3-biopython*: Tracing dependencies...
	py3-numpy
	python3
	python3~3.12
	so:libc.musl-armhf.so.1
>>> py3-biopython*: Package size: 11.1 MB
>>> py3-biopython*: Compressing data...
>>> py3-biopython*: Create checksum...
>>> py3-biopython*: Create py3-biopython-1.85-r0.apk
>>> py3-biopython: Build complete at Tue, 04 Nov 2025 22:56:20 +0000 elapsed time 0h 0m 30s
>>> py3-biopython: Cleaning up srcdir
>>> py3-biopython: Cleaning up pkgdir
>>> py3-biopython: Cleaning up tmpdir
>>> py3-biopython: Uninstalling dependencies...
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(10/31) Purging py3-packaging-pyc (25.0-r0)
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(12/31) Purging py3-parsing-pyc (3.2.3-r0)
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busybox-1.37.0-r24.trigger: Executing script...
OK: 342 MiB in 105 packages
>>> py3-biopython: Updating the community/armhf repository index...
>>> py3-biopython: Signing the index...