>>> py3-bioframe: Building community/py3-bioframe 0.8.0-r0 (using abuild 3.16.0_rc4-r0) started Fri, 21 Nov 2025 11:00:03 +0000 >>> py3-bioframe: Validating /home/buildozer/aports/community/py3-bioframe/APKBUILD... >>> py3-bioframe: Analyzing dependencies... >>> py3-bioframe: Installing for build: build-base py3-matplotlib py3-numpy py3-pandas py3-yaml py3-requests py3-typing-extensions py3-setuptools py3-gpep517 py3-hatchling py3-wheel py3-pytest-xdist ( 1/97) Installing gdbm (1.26-r0) ( 2/97) Installing xz-libs (5.8.1-r0) ( 3/97) Installing mpdecimal (4.0.1-r0) ( 4/97) Installing libpanelw (6.5_p20251115-r0) ( 5/97) Installing python3 (3.12.12-r0) ( 6/97) Installing python3-pycache-pyc0 (3.12.12-r0) ( 7/97) Installing pyc (3.12.12-r0) ( 8/97) Installing py3-contourpy-pyc (1.3.2-r0) ( 9/97) Installing py3-matplotlib-pyc (3.10.6-r0) (10/97) Installing py3-numpy-pyc (2.3.5-r0) (11/97) Installing python3-pyc (3.12.12-r0) (12/97) Installing libgfortran (15.2.0-r2) (13/97) Installing openblas (0.3.30-r0) (14/97) Installing py3-numpy (2.3.5-r0) (15/97) Installing py3-numpy-tests (2.3.5-r0) (16/97) Installing py3-contourpy (1.3.2-r0) (17/97) Installing py3-cycler (0.12.1-r1) (18/97) Installing py3-cycler-pyc (0.12.1-r1) (19/97) Installing py3-six (1.17.0-r0) (20/97) Installing py3-six-pyc (1.17.0-r0) (21/97) Installing py3-dateutil (2.9.0-r2) (22/97) Installing py3-dateutil-pyc (2.9.0-r2) (23/97) Installing py3-fonttools (4.60.1-r0) (24/97) Installing py3-fonttools-pyc (4.60.1-r0) (25/97) Installing py3-kiwisolver (1.4.8-r0) (26/97) Installing py3-kiwisolver-pyc (1.4.8-r0) (27/97) Installing py3-matplotlib-fonts (3.10.6-r0) (28/97) Installing py3-matplotlib-data (3.10.6-r0) (29/97) Installing py3-parsing (3.2.3-r0) (30/97) Installing py3-parsing-pyc (3.2.3-r0) (31/97) Installing py3-packaging (25.0-r0) (32/97) Installing py3-packaging-pyc (25.0-r0) (33/97) Installing libimagequant (4.2.2-r0) (34/97) Installing openjpeg (2.5.4-r1) (35/97) Installing libsharpyuv (1.6.0-r0) (36/97) Installing libwebp (1.6.0-r0) (37/97) Installing tiff (4.7.1-r0) (38/97) Installing libwebpdemux (1.6.0-r0) (39/97) Installing libwebpmux (1.6.0-r0) (40/97) Installing py3-pillow (11.3.0-r1) (41/97) Installing py3-pillow-pyc (11.3.0-r1) (42/97) Installing qhull (2020.2-r3) (43/97) Installing py3-matplotlib (3.10.6-r0) (44/97) Installing py3-tz (2025.2-r0) (45/97) Installing py3-tz-pyc (2025.2-r0) (46/97) Installing py3-attrs (25.3.0-r0) (47/97) Installing py3-attrs-pyc (25.3.0-r0) (48/97) Installing py3-tzdata (2025.2-r0) (49/97) Installing py3-tzdata-pyc (2025.2-r0) (50/97) Installing py3-pandas (2.3.3-r0) (51/97) Installing py3-pandas-pyc (2.3.3-r0) (52/97) Installing yaml (0.2.5-r2) (53/97) Installing py3-yaml (6.0.3-r0) (54/97) Installing py3-yaml-pyc (6.0.3-r0) (55/97) Installing py3-certifi (2025.11.12-r0) (56/97) Installing py3-certifi-pyc (2025.11.12-r0) (57/97) Installing py3-charset-normalizer (3.4.4-r0) (58/97) Installing py3-charset-normalizer-pyc (3.4.4-r0) (59/97) Installing py3-idna (3.11-r0) (60/97) Installing py3-idna-pyc (3.11-r0) (61/97) Installing py3-urllib3 (2.5.0-r0) (62/97) Installing py3-urllib3-pyc (2.5.0-r0) (63/97) Installing py3-requests (2.32.5-r0) (64/97) Installing py3-requests-pyc (2.32.5-r0) (65/97) Installing py3-typing-extensions (4.15.0-r0) (66/97) Installing py3-typing-extensions-pyc (4.15.0-r0) (67/97) Installing py3-setuptools (80.9.0-r2) (68/97) Installing py3-setuptools-pyc (80.9.0-r2) (69/97) Installing py3-installer (0.7.0-r2) (70/97) Installing py3-installer-pyc (0.7.0-r2) (71/97) Installing py3-gpep517 (19-r1) (72/97) Installing py3-gpep517-pyc (19-r1) (73/97) Installing py3-editables (0.5-r2) (74/97) Installing py3-editables-pyc (0.5-r2) (75/97) Installing py3-pathspec (0.12.1-r2) (76/97) Installing py3-pathspec-pyc (0.12.1-r2) (77/97) Installing py3-pluggy (1.6.0-r0) (78/97) Installing py3-pluggy-pyc (1.6.0-r0) (79/97) Installing py3-trove-classifiers (2025.9.11.17-r0) (80/97) Installing py3-trove-classifiers-pyc (2025.9.11.17-r0) (81/97) Installing py3-hatchling (1.27.0-r0) (82/97) Installing py3-hatchling-pyc (1.27.0-r0) (83/97) Installing py3-wheel (0.46.1-r0) (84/97) Installing py3-wheel-pyc (0.46.1-r0) (85/97) Installing py3-execnet (2.1.1-r0) (86/97) Installing py3-execnet-pyc (2.1.1-r0) (87/97) Installing py3-iniconfig (2.3.0-r0) (88/97) Installing py3-iniconfig-pyc (2.3.0-r0) (89/97) Installing py3-py (1.11.0-r4) (90/97) Installing py3-py-pyc (1.11.0-r4) (91/97) Installing py3-pygments (2.19.2-r0) (92/97) Installing py3-pygments-pyc (2.19.2-r0) (93/97) Installing py3-pytest (8.4.2-r1) (94/97) Installing py3-pytest-pyc (8.4.2-r1) (95/97) Installing py3-pytest-xdist (3.8.0-r0) (96/97) Installing py3-pytest-xdist-pyc (3.8.0-r0) (97/97) Installing .makedepends-py3-bioframe (20251121.110026) busybox-1.37.0-r27.trigger: Executing script... OK: 804 MiB in 248 packages >>> py3-bioframe: Cleaning up srcdir >>> py3-bioframe: Cleaning up pkgdir >>> py3-bioframe: Cleaning up tmpdir >>> py3-bioframe: Fetching https://distfiles.alpinelinux.org/distfiles/v3.23/bioframe-0.8.0.tar.gz Connecting to distfiles.alpinelinux.org (172.105.82.32:443) wget: server returned error: HTTP/1.1 404 Not Found >>> py3-bioframe: Fetching https://github.com/open2c/bioframe/archive/v0.8.0/bioframe-0.8.0.tar.gz Connecting to github.com (20.26.156.215:443) Connecting to codeload.github.com (20.26.156.216:443) saving to '/var/cache/distfiles/v3.23/bioframe-0.8.0.tar.gz.part' bioframe-0.8.0.tar.g 412k --:--:-- ETA bioframe-0.8.0.tar.g 100% |********************************| 952k 0:00:00 ETA '/var/cache/distfiles/v3.23/bioframe-0.8.0.tar.gz.part' saved /var/cache/distfiles/v3.23/bioframe-0.8.0.tar.gz: OK >>> py3-bioframe: Fetching https://distfiles.alpinelinux.org/distfiles/v3.23/bioframe-0.8.0.tar.gz /var/cache/distfiles/v3.23/bioframe-0.8.0.tar.gz: OK >>> py3-bioframe: Unpacking /var/cache/distfiles/v3.23/bioframe-0.8.0.tar.gz... 2025-11-21 11:00:33,076 gpep517 INFO Building wheel via backend hatchling.build 2025-11-21 11:00:33,252 gpep517 INFO The backend produced .dist/bioframe-0.8.0-py3-none-any.whl bioframe-0.8.0-py3-none-any.whl ============================= test session starts ============================== platform linux -- Python 3.12.12, pytest-8.4.2, pluggy-1.6.0 rootdir: /home/buildozer/aports/community/py3-bioframe/src/bioframe-0.8.0 configfile: pyproject.toml testpaths: tests plugins: xdist-3.8.0 created: 64/64 workers 64 workers [70 items] ........ss........s................................................... [100%] =========================== short test summary info ============================ SKIPPED [1] tests/test_extras.py:85: could not import 'Bio': No module named 'Bio' SKIPPED [1] tests/test_extras.py:97: could not import 'pysam': No module named 'pysam' SKIPPED [1] tests/test_extras.py:129: could not import 'pysam': No module named 'pysam' ======================== 67 passed, 3 skipped in 19.21s ======================== >>> py3-bioframe: Entering fakeroot... >>> py3-bioframe-doc*: Running split function doc... 'usr/share/doc' -> '/home/buildozer/aports/community/py3-bioframe/pkg/py3-bioframe-doc/usr/share/doc' >>> py3-bioframe-doc*: Preparing subpackage py3-bioframe-doc... >>> py3-bioframe-doc*: Running postcheck for py3-bioframe-doc >>> py3-bioframe-pyc*: Running split function pyc... 'usr/lib/python3.12/site-packages/bioframe/core/__pycache__' -> '/home/buildozer/aports/community/py3-bioframe/pkg/py3-bioframe-pyc/usr/lib/python3.12/site-packages/bioframe/core/__pycache__' 'usr/lib/python3.12/site-packages/bioframe/io/__pycache__' -> '/home/buildozer/aports/community/py3-bioframe/pkg/py3-bioframe-pyc/usr/lib/python3.12/site-packages/bioframe/io/__pycache__' 'usr/lib/python3.12/site-packages/bioframe/sandbox/__pycache__' -> '/home/buildozer/aports/community/py3-bioframe/pkg/py3-bioframe-pyc/usr/lib/python3.12/site-packages/bioframe/sandbox/__pycache__' 'usr/lib/python3.12/site-packages/bioframe/__pycache__' -> '/home/buildozer/aports/community/py3-bioframe/pkg/py3-bioframe-pyc/usr/lib/python3.12/site-packages/bioframe/__pycache__' >>> py3-bioframe-pyc*: Preparing subpackage py3-bioframe-pyc... >>> py3-bioframe-pyc*: Running postcheck for py3-bioframe-pyc >>> py3-bioframe*: Running postcheck for py3-bioframe >>> py3-bioframe*: Preparing package py3-bioframe... >>> py3-bioframe-doc*: Tracing dependencies... >>> py3-bioframe-doc*: Package size: 7.7 KB >>> py3-bioframe-doc*: Compressing data... >>> py3-bioframe-doc*: Create checksum... >>> py3-bioframe-doc*: Create py3-bioframe-doc-0.8.0-r0.apk >>> py3-bioframe-pyc*: Tracing dependencies... python3~3.12 >>> py3-bioframe-pyc*: Package size: 263.5 KB >>> py3-bioframe-pyc*: Compressing data... >>> py3-bioframe-pyc*: Create checksum... >>> py3-bioframe-pyc*: Create py3-bioframe-pyc-0.8.0-r0.apk >>> py3-bioframe*: Tracing dependencies... py3-matplotlib py3-numpy py3-pandas py3-yaml py3-requests py3-typing-extensions py3-setuptools python3~3.12 >>> py3-bioframe*: Package size: 238.5 KB >>> py3-bioframe*: Compressing data... >>> py3-bioframe*: Create checksum... >>> py3-bioframe*: Create py3-bioframe-0.8.0-r0.apk >>> py3-bioframe: Build complete at Fri, 21 Nov 2025 11:00:54 +0000 elapsed time 0h 0m 51s >>> py3-bioframe: Cleaning up srcdir >>> py3-bioframe: Cleaning up pkgdir >>> py3-bioframe: Uninstalling dependencies... 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OK: 579 MiB in 151 packages >>> py3-bioframe: Updating the community/ppc64le repository index... >>> py3-bioframe: Signing the index...