>>> py3-biopython: Building community/py3-biopython 1.85-r0 (using abuild 3.16.0_rc4-r0) started Thu, 20 Nov 2025 00:44:11 +0000 >>> py3-biopython: Validating /home/buildozer/aports/community/py3-biopython/APKBUILD... >>> WARNING: py3-biopython: No maintainer >>> py3-biopython: Analyzing dependencies... >>> py3-biopython: Installing for build: build-base py3-numpy python3 py3-gpep517 py3-setuptools py3-wheel py3-numpy-dev python3-dev ( 1/28) Installing gdbm (1.26-r0) ( 2/28) Installing xz-libs (5.8.1-r0) ( 3/28) Installing mpdecimal (4.0.1-r0) ( 4/28) Installing libpanelw (6.5_p20251115-r0) ( 5/28) Installing python3 (3.12.12-r0) ( 6/28) Installing python3-pycache-pyc0 (3.12.12-r0) ( 7/28) Installing pyc (3.12.12-r0) ( 8/28) Installing py3-numpy-pyc (2.3.5-r0) ( 9/28) Installing python3-pyc (3.12.12-r0) (10/28) Installing libgfortran (15.2.0-r2) (11/28) Installing openblas (0.3.30-r0) (12/28) Installing py3-numpy (2.3.5-r0) (13/28) Installing py3-numpy-tests (2.3.5-r0) (14/28) Installing py3-installer (0.7.0-r2) (15/28) Installing py3-installer-pyc (0.7.0-r2) (16/28) Installing py3-gpep517 (19-r1) (17/28) Installing py3-gpep517-pyc (19-r1) (18/28) Installing py3-parsing (3.2.3-r0) (19/28) Installing py3-parsing-pyc (3.2.3-r0) (20/28) Installing py3-packaging (25.0-r0) (21/28) Installing py3-packaging-pyc (25.0-r0) (22/28) Installing py3-setuptools (80.9.0-r2) (23/28) Installing py3-setuptools-pyc (80.9.0-r2) (24/28) Installing py3-wheel (0.46.1-r0) (25/28) Installing py3-wheel-pyc (0.46.1-r0) (26/28) Installing py3-numpy-dev (2.3.5-r0) (27/28) Installing python3-dev (3.12.12-r0) (28/28) Installing .makedepends-py3-biopython (20251120.004430) busybox-1.37.0-r26.trigger: Executing script... OK: 738 MiB in 179 packages >>> py3-biopython: Cleaning up srcdir >>> py3-biopython: Cleaning up pkgdir >>> py3-biopython: Cleaning up tmpdir >>> py3-biopython: Fetching https://distfiles.alpinelinux.org/distfiles/v3.23/biopython-1.85.tar.gz Connecting to distfiles.alpinelinux.org (172.105.82.32:443) saving to '/var/cache/distfiles/v3.23/biopython-1.85.tar.gz.part' biopython-1.85.tar.g 2% | | 479k 0:00:39 ETA biopython-1.85.tar.g 21% |****** | 4191k 0:00:07 ETA biopython-1.85.tar.g 53% |***************** | 10.1M 0:00:02 ETA biopython-1.85.tar.g 83% |************************** | 15.8M 0:00:00 ETA biopython-1.85.tar.g 100% |********************************| 18.9M 0:00:00 ETA '/var/cache/distfiles/v3.23/biopython-1.85.tar.gz.part' saved /var/cache/distfiles/v3.23/biopython-1.85.tar.gz: OK >>> py3-biopython: Fetching https://distfiles.alpinelinux.org/distfiles/v3.23/biopython-1.85.tar.gz /var/cache/distfiles/v3.23/biopython-1.85.tar.gz: OK >>> py3-biopython: Unpacking /var/cache/distfiles/v3.23/biopython-1.85.tar.gz... 2025-11-20 00:44:38,068 gpep517 INFO Building wheel via backend setuptools.build_meta:__legacy__ /usr/lib/python3.12/site-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: Freely Distributable See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! self._finalize_license_expression() 2025-11-20 00:44:38,107 root INFO running bdist_wheel 2025-11-20 00:44:38,139 root INFO running build 2025-11-20 00:44:38,139 root INFO running build_py 2025-11-20 00:44:38,146 root INFO creating build/lib.linux-ppc64le-cpython-312/Bio 2025-11-20 00:44:38,146 root INFO copying Bio/pairwise2.py -> build/lib.linux-ppc64le-cpython-312/Bio 2025-11-20 00:44:38,147 root INFO copying Bio/MarkovModel.py -> build/lib.linux-ppc64le-cpython-312/Bio 2025-11-20 00:44:38,147 root INFO copying Bio/bgzf.py -> build/lib.linux-ppc64le-cpython-312/Bio 2025-11-20 00:44:38,147 root INFO copying Bio/MaxEntropy.py -> build/lib.linux-ppc64le-cpython-312/Bio 2025-11-20 00:44:38,148 root INFO copying Bio/NaiveBayes.py -> build/lib.linux-ppc64le-cpython-312/Bio 2025-11-20 00:44:38,148 root INFO copying Bio/kNN.py -> build/lib.linux-ppc64le-cpython-312/Bio 2025-11-20 00:44:38,148 root INFO copying Bio/File.py -> build/lib.linux-ppc64le-cpython-312/Bio 2025-11-20 00:44:38,149 root INFO copying Bio/SeqFeature.py -> build/lib.linux-ppc64le-cpython-312/Bio 2025-11-20 00:44:38,149 root INFO copying Bio/LogisticRegression.py -> build/lib.linux-ppc64le-cpython-312/Bio 2025-11-20 00:44:38,149 root INFO copying Bio/SeqRecord.py -> build/lib.linux-ppc64le-cpython-312/Bio 2025-11-20 00:44:38,150 root INFO copying Bio/__init__.py -> build/lib.linux-ppc64le-cpython-312/Bio 2025-11-20 00:44:38,150 root INFO copying Bio/_utils.py -> build/lib.linux-ppc64le-cpython-312/Bio 2025-11-20 00:44:38,150 root INFO copying Bio/Seq.py -> build/lib.linux-ppc64le-cpython-312/Bio 2025-11-20 00:44:38,151 root INFO creating build/lib.linux-ppc64le-cpython-312/Bio/Affy 2025-11-20 00:44:38,151 root INFO copying Bio/Affy/CelFile.py -> build/lib.linux-ppc64le-cpython-312/Bio/Affy 2025-11-20 00:44:38,151 root INFO copying Bio/Affy/__init__.py -> build/lib.linux-ppc64le-cpython-312/Bio/Affy 2025-11-20 00:44:38,152 root INFO creating build/lib.linux-ppc64le-cpython-312/Bio/Align 2025-11-20 00:44:38,152 root INFO copying Bio/Align/msf.py -> build/lib.linux-ppc64le-cpython-312/Bio/Align 2025-11-20 00:44:38,153 root INFO copying Bio/Align/bigpsl.py -> build/lib.linux-ppc64le-cpython-312/Bio/Align 2025-11-20 00:44:38,153 root INFO copying Bio/Align/tabular.py -> build/lib.linux-ppc64le-cpython-312/Bio/Align 2025-11-20 00:44:38,153 root INFO copying Bio/Align/psl.py -> build/lib.linux-ppc64le-cpython-312/Bio/Align 2025-11-20 00:44:38,154 root INFO copying Bio/Align/chain.py -> build/lib.linux-ppc64le-cpython-312/Bio/Align 2025-11-20 00:44:38,154 root INFO copying Bio/Align/phylip.py -> build/lib.linux-ppc64le-cpython-312/Bio/Align 2025-11-20 00:44:38,154 root INFO copying Bio/Align/maf.py -> build/lib.linux-ppc64le-cpython-312/Bio/Align 2025-11-20 00:44:38,155 root INFO copying Bio/Align/clustal.py -> build/lib.linux-ppc64le-cpython-312/Bio/Align 2025-11-20 00:44:38,155 root INFO copying Bio/Align/mauve.py -> build/lib.linux-ppc64le-cpython-312/Bio/Align 2025-11-20 00:44:38,155 root INFO copying Bio/Align/nexus.py -> build/lib.linux-ppc64le-cpython-312/Bio/Align 2025-11-20 00:44:38,156 root INFO copying Bio/Align/exonerate.py -> build/lib.linux-ppc64le-cpython-312/Bio/Align 2025-11-20 00:44:38,156 root INFO copying Bio/Align/stockholm.py -> build/lib.linux-ppc64le-cpython-312/Bio/Align 2025-11-20 00:44:38,156 root INFO copying Bio/Align/fasta.py -> build/lib.linux-ppc64le-cpython-312/Bio/Align 2025-11-20 00:44:38,157 root INFO copying Bio/Align/analysis.py -> build/lib.linux-ppc64le-cpython-312/Bio/Align 2025-11-20 00:44:38,157 root INFO copying Bio/Align/bed.py -> build/lib.linux-ppc64le-cpython-312/Bio/Align 2025-11-20 00:44:38,157 root INFO copying Bio/Align/a2m.py -> build/lib.linux-ppc64le-cpython-312/Bio/Align 2025-11-20 00:44:38,157 root INFO copying Bio/Align/AlignInfo.py -> build/lib.linux-ppc64le-cpython-312/Bio/Align 2025-11-20 00:44:38,158 root INFO copying Bio/Align/sam.py -> build/lib.linux-ppc64le-cpython-312/Bio/Align 2025-11-20 00:44:38,158 root INFO copying Bio/Align/hhr.py -> build/lib.linux-ppc64le-cpython-312/Bio/Align 2025-11-20 00:44:38,158 root INFO copying Bio/Align/bigbed.py -> build/lib.linux-ppc64le-cpython-312/Bio/Align 2025-11-20 00:44:38,159 root INFO copying Bio/Align/bigmaf.py -> build/lib.linux-ppc64le-cpython-312/Bio/Align 2025-11-20 00:44:38,159 root INFO copying Bio/Align/__init__.py -> build/lib.linux-ppc64le-cpython-312/Bio/Align 2025-11-20 00:44:38,160 root INFO copying Bio/Align/emboss.py -> build/lib.linux-ppc64le-cpython-312/Bio/Align 2025-11-20 00:44:38,160 root INFO copying Bio/Align/interfaces.py -> build/lib.linux-ppc64le-cpython-312/Bio/Align 2025-11-20 00:44:38,160 root INFO creating build/lib.linux-ppc64le-cpython-312/Bio/Align/Applications 2025-11-20 00:44:38,161 root INFO copying Bio/Align/Applications/_Prank.py -> build/lib.linux-ppc64le-cpython-312/Bio/Align/Applications 2025-11-20 00:44:38,161 root INFO copying Bio/Align/Applications/_Clustalw.py -> build/lib.linux-ppc64le-cpython-312/Bio/Align/Applications 2025-11-20 00:44:38,161 root INFO copying Bio/Align/Applications/_Probcons.py -> build/lib.linux-ppc64le-cpython-312/Bio/Align/Applications 2025-11-20 00:44:38,162 root INFO copying Bio/Align/Applications/_Muscle.py -> build/lib.linux-ppc64le-cpython-312/Bio/Align/Applications 2025-11-20 00:44:38,162 root INFO copying Bio/Align/Applications/_ClustalOmega.py -> build/lib.linux-ppc64le-cpython-312/Bio/Align/Applications 2025-11-20 00:44:38,162 root INFO copying Bio/Align/Applications/_Dialign.py -> build/lib.linux-ppc64le-cpython-312/Bio/Align/Applications 2025-11-20 00:44:38,163 root INFO copying Bio/Align/Applications/_TCoffee.py -> build/lib.linux-ppc64le-cpython-312/Bio/Align/Applications 2025-11-20 00:44:38,163 root INFO copying Bio/Align/Applications/_Mafft.py -> build/lib.linux-ppc64le-cpython-312/Bio/Align/Applications 2025-11-20 00:44:38,163 root INFO copying Bio/Align/Applications/_MSAProbs.py -> build/lib.linux-ppc64le-cpython-312/Bio/Align/Applications 2025-11-20 00:44:38,164 root INFO copying Bio/Align/Applications/__init__.py -> build/lib.linux-ppc64le-cpython-312/Bio/Align/Applications 2025-11-20 00:44:38,164 root INFO creating build/lib.linux-ppc64le-cpython-312/Bio/Align/substitution_matrices 2025-11-20 00:44:38,164 root INFO copying Bio/Align/substitution_matrices/__init__.py -> build/lib.linux-ppc64le-cpython-312/Bio/Align/substitution_matrices 2025-11-20 00:44:38,165 root INFO creating build/lib.linux-ppc64le-cpython-312/Bio/AlignIO 2025-11-20 00:44:38,165 root INFO copying Bio/AlignIO/NexusIO.py -> build/lib.linux-ppc64le-cpython-312/Bio/AlignIO 2025-11-20 00:44:38,165 root INFO copying Bio/AlignIO/FastaIO.py -> build/lib.linux-ppc64le-cpython-312/Bio/AlignIO 2025-11-20 00:44:38,166 root INFO copying Bio/AlignIO/PhylipIO.py -> build/lib.linux-ppc64le-cpython-312/Bio/AlignIO 2025-11-20 00:44:38,166 root INFO copying Bio/AlignIO/EmbossIO.py -> build/lib.linux-ppc64le-cpython-312/Bio/AlignIO 2025-11-20 00:44:38,166 root INFO copying Bio/AlignIO/StockholmIO.py -> build/lib.linux-ppc64le-cpython-312/Bio/AlignIO 2025-11-20 00:44:38,167 root INFO copying Bio/AlignIO/MsfIO.py -> build/lib.linux-ppc64le-cpython-312/Bio/AlignIO 2025-11-20 00:44:38,167 root INFO copying Bio/AlignIO/ClustalIO.py -> build/lib.linux-ppc64le-cpython-312/Bio/AlignIO 2025-11-20 00:44:38,167 root INFO copying Bio/AlignIO/__init__.py -> build/lib.linux-ppc64le-cpython-312/Bio/AlignIO 2025-11-20 00:44:38,168 root INFO copying Bio/AlignIO/Interfaces.py -> build/lib.linux-ppc64le-cpython-312/Bio/AlignIO 2025-11-20 00:44:38,168 root INFO copying Bio/AlignIO/MafIO.py -> build/lib.linux-ppc64le-cpython-312/Bio/AlignIO 2025-11-20 00:44:38,168 root INFO copying Bio/AlignIO/MauveIO.py -> build/lib.linux-ppc64le-cpython-312/Bio/AlignIO 2025-11-20 00:44:38,169 root INFO creating build/lib.linux-ppc64le-cpython-312/Bio/Alphabet 2025-11-20 00:44:38,169 root INFO copying Bio/Alphabet/__init__.py -> build/lib.linux-ppc64le-cpython-312/Bio/Alphabet 2025-11-20 00:44:38,169 root INFO creating build/lib.linux-ppc64le-cpython-312/Bio/Application 2025-11-20 00:44:38,169 root INFO copying Bio/Application/__init__.py -> build/lib.linux-ppc64le-cpython-312/Bio/Application 2025-11-20 00:44:38,170 root INFO creating build/lib.linux-ppc64le-cpython-312/Bio/Blast 2025-11-20 00:44:38,170 root INFO copying Bio/Blast/_parser.py -> build/lib.linux-ppc64le-cpython-312/Bio/Blast 2025-11-20 00:44:38,170 root INFO copying Bio/Blast/NCBIXML.py -> build/lib.linux-ppc64le-cpython-312/Bio/Blast 2025-11-20 00:44:38,171 root INFO copying Bio/Blast/Applications.py -> build/lib.linux-ppc64le-cpython-312/Bio/Blast 2025-11-20 00:44:38,171 root INFO copying Bio/Blast/_writers.py -> build/lib.linux-ppc64le-cpython-312/Bio/Blast 2025-11-20 00:44:38,171 root INFO copying Bio/Blast/__init__.py -> build/lib.linux-ppc64le-cpython-312/Bio/Blast 2025-11-20 00:44:38,172 root INFO copying Bio/Blast/NCBIWWW.py -> build/lib.linux-ppc64le-cpython-312/Bio/Blast 2025-11-20 00:44:38,172 root INFO creating build/lib.linux-ppc64le-cpython-312/Bio/CAPS 2025-11-20 00:44:38,172 root INFO copying Bio/CAPS/__init__.py -> build/lib.linux-ppc64le-cpython-312/Bio/CAPS 2025-11-20 00:44:38,173 root INFO creating build/lib.linux-ppc64le-cpython-312/Bio/Cluster 2025-11-20 00:44:38,173 root INFO copying Bio/Cluster/__init__.py -> build/lib.linux-ppc64le-cpython-312/Bio/Cluster 2025-11-20 00:44:38,174 root INFO creating build/lib.linux-ppc64le-cpython-312/Bio/codonalign 2025-11-20 00:44:38,174 root INFO copying Bio/codonalign/codonseq.py -> build/lib.linux-ppc64le-cpython-312/Bio/codonalign 2025-11-20 00:44:38,174 root INFO copying Bio/codonalign/codonalignment.py -> build/lib.linux-ppc64le-cpython-312/Bio/codonalign 2025-11-20 00:44:38,174 root INFO copying Bio/codonalign/__init__.py -> build/lib.linux-ppc64le-cpython-312/Bio/codonalign 2025-11-20 00:44:38,175 root INFO creating build/lib.linux-ppc64le-cpython-312/Bio/Compass 2025-11-20 00:44:38,175 root INFO copying Bio/Compass/__init__.py -> build/lib.linux-ppc64le-cpython-312/Bio/Compass 2025-11-20 00:44:38,175 root INFO creating build/lib.linux-ppc64le-cpython-312/Bio/Data 2025-11-20 00:44:38,176 root INFO copying Bio/Data/PDBData.py -> build/lib.linux-ppc64le-cpython-312/Bio/Data 2025-11-20 00:44:38,176 root INFO copying Bio/Data/CodonTable.py -> build/lib.linux-ppc64le-cpython-312/Bio/Data 2025-11-20 00:44:38,176 root INFO copying Bio/Data/IUPACData.py -> build/lib.linux-ppc64le-cpython-312/Bio/Data 2025-11-20 00:44:38,177 root INFO copying Bio/Data/__init__.py -> build/lib.linux-ppc64le-cpython-312/Bio/Data 2025-11-20 00:44:38,177 root INFO creating build/lib.linux-ppc64le-cpython-312/Bio/Emboss 2025-11-20 00:44:38,177 root INFO copying Bio/Emboss/Primer3.py -> build/lib.linux-ppc64le-cpython-312/Bio/Emboss 2025-11-20 00:44:38,178 root INFO copying Bio/Emboss/PrimerSearch.py -> build/lib.linux-ppc64le-cpython-312/Bio/Emboss 2025-11-20 00:44:38,178 root INFO copying Bio/Emboss/Applications.py -> build/lib.linux-ppc64le-cpython-312/Bio/Emboss 2025-11-20 00:44:38,178 root INFO copying Bio/Emboss/__init__.py -> build/lib.linux-ppc64le-cpython-312/Bio/Emboss 2025-11-20 00:44:38,179 root INFO creating build/lib.linux-ppc64le-cpython-312/Bio/Entrez 2025-11-20 00:44:38,179 root INFO copying Bio/Entrez/Parser.py -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez 2025-11-20 00:44:38,179 root INFO copying Bio/Entrez/__init__.py -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez 2025-11-20 00:44:38,180 root INFO creating build/lib.linux-ppc64le-cpython-312/Bio/ExPASy 2025-11-20 00:44:38,180 root INFO copying Bio/ExPASy/Prodoc.py -> build/lib.linux-ppc64le-cpython-312/Bio/ExPASy 2025-11-20 00:44:38,180 root INFO copying Bio/ExPASy/Enzyme.py -> build/lib.linux-ppc64le-cpython-312/Bio/ExPASy 2025-11-20 00:44:38,181 root INFO copying Bio/ExPASy/ScanProsite.py -> build/lib.linux-ppc64le-cpython-312/Bio/ExPASy 2025-11-20 00:44:38,181 root INFO copying Bio/ExPASy/cellosaurus.py -> build/lib.linux-ppc64le-cpython-312/Bio/ExPASy 2025-11-20 00:44:38,181 root INFO copying Bio/ExPASy/Prosite.py -> build/lib.linux-ppc64le-cpython-312/Bio/ExPASy 2025-11-20 00:44:38,182 root INFO copying Bio/ExPASy/__init__.py -> build/lib.linux-ppc64le-cpython-312/Bio/ExPASy 2025-11-20 00:44:38,182 root INFO creating build/lib.linux-ppc64le-cpython-312/Bio/GenBank 2025-11-20 00:44:38,182 root INFO copying Bio/GenBank/utils.py -> build/lib.linux-ppc64le-cpython-312/Bio/GenBank 2025-11-20 00:44:38,183 root INFO copying Bio/GenBank/__init__.py -> build/lib.linux-ppc64le-cpython-312/Bio/GenBank 2025-11-20 00:44:38,183 root INFO copying Bio/GenBank/Scanner.py -> build/lib.linux-ppc64le-cpython-312/Bio/GenBank 2025-11-20 00:44:38,183 root INFO copying Bio/GenBank/Record.py -> build/lib.linux-ppc64le-cpython-312/Bio/GenBank 2025-11-20 00:44:38,184 root INFO creating build/lib.linux-ppc64le-cpython-312/Bio/Geo 2025-11-20 00:44:38,184 root INFO copying Bio/Geo/__init__.py -> build/lib.linux-ppc64le-cpython-312/Bio/Geo 2025-11-20 00:44:38,184 root INFO copying Bio/Geo/Record.py -> build/lib.linux-ppc64le-cpython-312/Bio/Geo 2025-11-20 00:44:38,185 root INFO creating build/lib.linux-ppc64le-cpython-312/Bio/Graphics 2025-11-20 00:44:38,185 root INFO copying Bio/Graphics/BasicChromosome.py -> build/lib.linux-ppc64le-cpython-312/Bio/Graphics 2025-11-20 00:44:38,185 root INFO copying Bio/Graphics/KGML_vis.py -> build/lib.linux-ppc64le-cpython-312/Bio/Graphics 2025-11-20 00:44:38,186 root INFO copying Bio/Graphics/ColorSpiral.py -> build/lib.linux-ppc64le-cpython-312/Bio/Graphics 2025-11-20 00:44:38,186 root INFO copying Bio/Graphics/Comparative.py -> build/lib.linux-ppc64le-cpython-312/Bio/Graphics 2025-11-20 00:44:38,186 root INFO copying Bio/Graphics/DisplayRepresentation.py -> build/lib.linux-ppc64le-cpython-312/Bio/Graphics 2025-11-20 00:44:38,187 root INFO copying Bio/Graphics/Distribution.py -> build/lib.linux-ppc64le-cpython-312/Bio/Graphics 2025-11-20 00:44:38,187 root INFO copying Bio/Graphics/__init__.py -> build/lib.linux-ppc64le-cpython-312/Bio/Graphics 2025-11-20 00:44:38,187 root INFO creating build/lib.linux-ppc64le-cpython-312/Bio/Graphics/GenomeDiagram 2025-11-20 00:44:38,188 root INFO copying Bio/Graphics/GenomeDiagram/_CircularDrawer.py -> build/lib.linux-ppc64le-cpython-312/Bio/Graphics/GenomeDiagram 2025-11-20 00:44:38,188 root INFO copying Bio/Graphics/GenomeDiagram/_Feature.py -> build/lib.linux-ppc64le-cpython-312/Bio/Graphics/GenomeDiagram 2025-11-20 00:44:38,188 root INFO copying Bio/Graphics/GenomeDiagram/_Diagram.py -> build/lib.linux-ppc64le-cpython-312/Bio/Graphics/GenomeDiagram 2025-11-20 00:44:38,189 root INFO copying Bio/Graphics/GenomeDiagram/_Colors.py -> build/lib.linux-ppc64le-cpython-312/Bio/Graphics/GenomeDiagram 2025-11-20 00:44:38,189 root INFO copying Bio/Graphics/GenomeDiagram/_LinearDrawer.py -> build/lib.linux-ppc64le-cpython-312/Bio/Graphics/GenomeDiagram 2025-11-20 00:44:38,189 root INFO copying Bio/Graphics/GenomeDiagram/_AbstractDrawer.py -> build/lib.linux-ppc64le-cpython-312/Bio/Graphics/GenomeDiagram 2025-11-20 00:44:38,190 root INFO copying Bio/Graphics/GenomeDiagram/_FeatureSet.py -> build/lib.linux-ppc64le-cpython-312/Bio/Graphics/GenomeDiagram 2025-11-20 00:44:38,190 root INFO copying Bio/Graphics/GenomeDiagram/_CrossLink.py -> build/lib.linux-ppc64le-cpython-312/Bio/Graphics/GenomeDiagram 2025-11-20 00:44:38,190 root INFO copying Bio/Graphics/GenomeDiagram/_GraphSet.py -> build/lib.linux-ppc64le-cpython-312/Bio/Graphics/GenomeDiagram 2025-11-20 00:44:38,191 root INFO copying Bio/Graphics/GenomeDiagram/_Graph.py -> build/lib.linux-ppc64le-cpython-312/Bio/Graphics/GenomeDiagram 2025-11-20 00:44:38,191 root INFO copying Bio/Graphics/GenomeDiagram/_Track.py -> build/lib.linux-ppc64le-cpython-312/Bio/Graphics/GenomeDiagram 2025-11-20 00:44:38,191 root INFO copying Bio/Graphics/GenomeDiagram/__init__.py -> build/lib.linux-ppc64le-cpython-312/Bio/Graphics/GenomeDiagram 2025-11-20 00:44:38,192 root INFO creating build/lib.linux-ppc64le-cpython-312/Bio/HMM 2025-11-20 00:44:38,192 root INFO copying Bio/HMM/MarkovModel.py -> build/lib.linux-ppc64le-cpython-312/Bio/HMM 2025-11-20 00:44:38,192 root INFO copying Bio/HMM/Utilities.py -> build/lib.linux-ppc64le-cpython-312/Bio/HMM 2025-11-20 00:44:38,193 root INFO copying Bio/HMM/DynamicProgramming.py -> build/lib.linux-ppc64le-cpython-312/Bio/HMM 2025-11-20 00:44:38,193 root INFO copying Bio/HMM/Trainer.py -> build/lib.linux-ppc64le-cpython-312/Bio/HMM 2025-11-20 00:44:38,193 root INFO copying Bio/HMM/__init__.py -> build/lib.linux-ppc64le-cpython-312/Bio/HMM 2025-11-20 00:44:38,194 root INFO creating build/lib.linux-ppc64le-cpython-312/Bio/KEGG 2025-11-20 00:44:38,194 root INFO copying Bio/KEGG/REST.py -> build/lib.linux-ppc64le-cpython-312/Bio/KEGG 2025-11-20 00:44:38,194 root INFO copying Bio/KEGG/__init__.py -> build/lib.linux-ppc64le-cpython-312/Bio/KEGG 2025-11-20 00:44:38,195 root INFO creating build/lib.linux-ppc64le-cpython-312/Bio/KEGG/Compound 2025-11-20 00:44:38,195 root INFO copying Bio/KEGG/Compound/__init__.py -> build/lib.linux-ppc64le-cpython-312/Bio/KEGG/Compound 2025-11-20 00:44:38,195 root INFO creating build/lib.linux-ppc64le-cpython-312/Bio/KEGG/Enzyme 2025-11-20 00:44:38,195 root INFO copying Bio/KEGG/Enzyme/__init__.py -> build/lib.linux-ppc64le-cpython-312/Bio/KEGG/Enzyme 2025-11-20 00:44:38,196 root INFO creating build/lib.linux-ppc64le-cpython-312/Bio/KEGG/Gene 2025-11-20 00:44:38,196 root INFO copying Bio/KEGG/Gene/__init__.py -> build/lib.linux-ppc64le-cpython-312/Bio/KEGG/Gene 2025-11-20 00:44:38,196 root INFO creating build/lib.linux-ppc64le-cpython-312/Bio/KEGG/Map 2025-11-20 00:44:38,197 root INFO copying Bio/KEGG/Map/__init__.py -> build/lib.linux-ppc64le-cpython-312/Bio/KEGG/Map 2025-11-20 00:44:38,197 root INFO creating build/lib.linux-ppc64le-cpython-312/Bio/PDB/mmtf 2025-11-20 00:44:38,197 root INFO copying Bio/PDB/mmtf/mmtfio.py -> build/lib.linux-ppc64le-cpython-312/Bio/PDB/mmtf 2025-11-20 00:44:38,198 root INFO copying Bio/PDB/mmtf/__init__.py -> build/lib.linux-ppc64le-cpython-312/Bio/PDB/mmtf 2025-11-20 00:44:38,198 root INFO copying Bio/PDB/mmtf/DefaultParser.py -> build/lib.linux-ppc64le-cpython-312/Bio/PDB/mmtf 2025-11-20 00:44:38,198 root INFO creating build/lib.linux-ppc64le-cpython-312/Bio/KEGG/KGML 2025-11-20 00:44:38,199 root INFO copying Bio/KEGG/KGML/KGML_pathway.py -> build/lib.linux-ppc64le-cpython-312/Bio/KEGG/KGML 2025-11-20 00:44:38,199 root INFO copying Bio/KEGG/KGML/KGML_parser.py -> build/lib.linux-ppc64le-cpython-312/Bio/KEGG/KGML 2025-11-20 00:44:38,199 root INFO copying Bio/KEGG/KGML/__init__.py -> build/lib.linux-ppc64le-cpython-312/Bio/KEGG/KGML 2025-11-20 00:44:38,200 root INFO creating build/lib.linux-ppc64le-cpython-312/Bio/Medline 2025-11-20 00:44:38,200 root INFO copying Bio/Medline/__init__.py -> build/lib.linux-ppc64le-cpython-312/Bio/Medline 2025-11-20 00:44:38,201 root INFO creating build/lib.linux-ppc64le-cpython-312/Bio/motifs 2025-11-20 00:44:38,201 root INFO copying Bio/motifs/pfm.py -> build/lib.linux-ppc64le-cpython-312/Bio/motifs 2025-11-20 00:44:38,201 root INFO copying Bio/motifs/alignace.py -> build/lib.linux-ppc64le-cpython-312/Bio/motifs 2025-11-20 00:44:38,201 root INFO copying Bio/motifs/mast.py -> build/lib.linux-ppc64le-cpython-312/Bio/motifs 2025-11-20 00:44:38,202 root INFO copying Bio/motifs/clusterbuster.py -> build/lib.linux-ppc64le-cpython-312/Bio/motifs 2025-11-20 00:44:38,202 root INFO copying Bio/motifs/thresholds.py -> build/lib.linux-ppc64le-cpython-312/Bio/motifs 2025-11-20 00:44:38,202 root INFO copying Bio/motifs/transfac.py -> build/lib.linux-ppc64le-cpython-312/Bio/motifs 2025-11-20 00:44:38,203 root INFO copying Bio/motifs/meme.py -> build/lib.linux-ppc64le-cpython-312/Bio/motifs 2025-11-20 00:44:38,203 root INFO copying Bio/motifs/xms.py -> build/lib.linux-ppc64le-cpython-312/Bio/motifs 2025-11-20 00:44:38,203 root INFO copying Bio/motifs/__init__.py -> build/lib.linux-ppc64le-cpython-312/Bio/motifs 2025-11-20 00:44:38,204 root INFO copying Bio/motifs/matrix.py -> build/lib.linux-ppc64le-cpython-312/Bio/motifs 2025-11-20 00:44:38,204 root INFO copying Bio/motifs/minimal.py -> build/lib.linux-ppc64le-cpython-312/Bio/motifs 2025-11-20 00:44:38,204 root INFO creating build/lib.linux-ppc64le-cpython-312/Bio/motifs/applications 2025-11-20 00:44:38,205 root INFO copying Bio/motifs/applications/_xxmotif.py -> build/lib.linux-ppc64le-cpython-312/Bio/motifs/applications 2025-11-20 00:44:38,205 root INFO copying Bio/motifs/applications/__init__.py -> build/lib.linux-ppc64le-cpython-312/Bio/motifs/applications 2025-11-20 00:44:38,205 root INFO creating build/lib.linux-ppc64le-cpython-312/Bio/motifs/jaspar 2025-11-20 00:44:38,206 root INFO copying Bio/motifs/jaspar/db.py -> build/lib.linux-ppc64le-cpython-312/Bio/motifs/jaspar 2025-11-20 00:44:38,206 root INFO copying Bio/motifs/jaspar/__init__.py -> build/lib.linux-ppc64le-cpython-312/Bio/motifs/jaspar 2025-11-20 00:44:38,206 root INFO creating build/lib.linux-ppc64le-cpython-312/Bio/Nexus 2025-11-20 00:44:38,207 root INFO copying Bio/Nexus/Nexus.py -> build/lib.linux-ppc64le-cpython-312/Bio/Nexus 2025-11-20 00:44:38,207 root INFO copying Bio/Nexus/StandardData.py -> build/lib.linux-ppc64le-cpython-312/Bio/Nexus 2025-11-20 00:44:38,207 root INFO copying Bio/Nexus/Trees.py -> build/lib.linux-ppc64le-cpython-312/Bio/Nexus 2025-11-20 00:44:38,208 root INFO copying Bio/Nexus/__init__.py -> build/lib.linux-ppc64le-cpython-312/Bio/Nexus 2025-11-20 00:44:38,208 root INFO copying Bio/Nexus/Nodes.py -> build/lib.linux-ppc64le-cpython-312/Bio/Nexus 2025-11-20 00:44:38,208 root INFO creating build/lib.linux-ppc64le-cpython-312/Bio/NMR 2025-11-20 00:44:38,209 root INFO copying Bio/NMR/NOEtools.py -> build/lib.linux-ppc64le-cpython-312/Bio/NMR 2025-11-20 00:44:38,209 root INFO copying Bio/NMR/xpktools.py -> build/lib.linux-ppc64le-cpython-312/Bio/NMR 2025-11-20 00:44:38,209 root INFO copying Bio/NMR/__init__.py -> build/lib.linux-ppc64le-cpython-312/Bio/NMR 2025-11-20 00:44:38,210 root INFO creating build/lib.linux-ppc64le-cpython-312/Bio/Pathway 2025-11-20 00:44:38,210 root INFO copying Bio/Pathway/__init__.py -> build/lib.linux-ppc64le-cpython-312/Bio/Pathway 2025-11-20 00:44:38,210 root INFO creating build/lib.linux-ppc64le-cpython-312/Bio/Pathway/Rep 2025-11-20 00:44:38,211 root INFO copying Bio/Pathway/Rep/MultiGraph.py -> build/lib.linux-ppc64le-cpython-312/Bio/Pathway/Rep 2025-11-20 00:44:38,211 root INFO copying Bio/Pathway/Rep/Graph.py -> build/lib.linux-ppc64le-cpython-312/Bio/Pathway/Rep 2025-11-20 00:44:38,211 root INFO copying Bio/Pathway/Rep/__init__.py -> build/lib.linux-ppc64le-cpython-312/Bio/Pathway/Rep 2025-11-20 00:44:38,212 root INFO copying Bio/PDB/Entity.py -> build/lib.linux-ppc64le-cpython-312/Bio/PDB 2025-11-20 00:44:38,213 root INFO copying Bio/PDB/Dice.py -> build/lib.linux-ppc64le-cpython-312/Bio/PDB 2025-11-20 00:44:38,213 root INFO copying Bio/PDB/DSSP.py -> build/lib.linux-ppc64le-cpython-312/Bio/PDB 2025-11-20 00:44:38,213 root INFO copying Bio/PDB/AbstractPropertyMap.py -> build/lib.linux-ppc64le-cpython-312/Bio/PDB 2025-11-20 00:44:38,214 root INFO copying Bio/PDB/Selection.py -> build/lib.linux-ppc64le-cpython-312/Bio/PDB 2025-11-20 00:44:38,214 root INFO copying Bio/PDB/MMCIF2Dict.py -> build/lib.linux-ppc64le-cpython-312/Bio/PDB 2025-11-20 00:44:38,214 root INFO copying Bio/PDB/vectors.py -> build/lib.linux-ppc64le-cpython-312/Bio/PDB 2025-11-20 00:44:38,215 root INFO copying Bio/PDB/PICIO.py -> build/lib.linux-ppc64le-cpython-312/Bio/PDB 2025-11-20 00:44:38,215 root INFO copying Bio/PDB/PSEA.py -> build/lib.linux-ppc64le-cpython-312/Bio/PDB 2025-11-20 00:44:38,215 root INFO copying Bio/PDB/Structure.py -> build/lib.linux-ppc64le-cpython-312/Bio/PDB 2025-11-20 00:44:38,216 root INFO copying Bio/PDB/internal_coords.py -> build/lib.linux-ppc64le-cpython-312/Bio/PDB 2025-11-20 00:44:38,216 root INFO copying Bio/PDB/qcprot.py -> build/lib.linux-ppc64le-cpython-312/Bio/PDB 2025-11-20 00:44:38,216 root INFO copying Bio/PDB/NACCESS.py -> build/lib.linux-ppc64le-cpython-312/Bio/PDB 2025-11-20 00:44:38,217 root INFO copying Bio/PDB/Model.py -> build/lib.linux-ppc64le-cpython-312/Bio/PDB 2025-11-20 00:44:38,217 root INFO copying Bio/PDB/Polypeptide.py -> build/lib.linux-ppc64le-cpython-312/Bio/PDB 2025-11-20 00:44:38,217 root INFO copying Bio/PDB/StructureAlignment.py -> build/lib.linux-ppc64le-cpython-312/Bio/PDB 2025-11-20 00:44:38,218 root INFO copying Bio/PDB/cealign.py -> build/lib.linux-ppc64le-cpython-312/Bio/PDB 2025-11-20 00:44:38,218 root INFO copying Bio/PDB/ic_data.py -> build/lib.linux-ppc64le-cpython-312/Bio/PDB 2025-11-20 00:44:38,218 root INFO copying Bio/PDB/PDBMLParser.py -> build/lib.linux-ppc64le-cpython-312/Bio/PDB 2025-11-20 00:44:38,219 root INFO copying Bio/PDB/Residue.py -> build/lib.linux-ppc64le-cpython-312/Bio/PDB 2025-11-20 00:44:38,219 root INFO copying Bio/PDB/PDBParser.py -> build/lib.linux-ppc64le-cpython-312/Bio/PDB 2025-11-20 00:44:38,219 root INFO copying Bio/PDB/MMCIFParser.py -> build/lib.linux-ppc64le-cpython-312/Bio/PDB 2025-11-20 00:44:38,220 root INFO copying Bio/PDB/mmcifio.py -> build/lib.linux-ppc64le-cpython-312/Bio/PDB 2025-11-20 00:44:38,220 root INFO copying Bio/PDB/Superimposer.py -> build/lib.linux-ppc64le-cpython-312/Bio/PDB 2025-11-20 00:44:38,220 root INFO copying Bio/PDB/PDBIO.py -> build/lib.linux-ppc64le-cpython-312/Bio/PDB 2025-11-20 00:44:38,221 root INFO copying Bio/PDB/NeighborSearch.py -> build/lib.linux-ppc64le-cpython-312/Bio/PDB 2025-11-20 00:44:38,221 root INFO copying Bio/PDB/PDBList.py -> build/lib.linux-ppc64le-cpython-312/Bio/PDB 2025-11-20 00:44:38,221 root INFO copying Bio/PDB/SCADIO.py -> build/lib.linux-ppc64le-cpython-312/Bio/PDB 2025-11-20 00:44:38,221 root INFO copying Bio/PDB/Atom.py -> build/lib.linux-ppc64le-cpython-312/Bio/PDB 2025-11-20 00:44:38,222 root INFO copying Bio/PDB/StructureBuilder.py -> build/lib.linux-ppc64le-cpython-312/Bio/PDB 2025-11-20 00:44:38,222 root INFO copying Bio/PDB/Chain.py -> build/lib.linux-ppc64le-cpython-312/Bio/PDB 2025-11-20 00:44:38,222 root INFO copying Bio/PDB/alphafold_db.py -> build/lib.linux-ppc64le-cpython-312/Bio/PDB 2025-11-20 00:44:38,223 root INFO copying Bio/PDB/PDBExceptions.py -> build/lib.linux-ppc64le-cpython-312/Bio/PDB 2025-11-20 00:44:38,223 root INFO copying Bio/PDB/SASA.py -> build/lib.linux-ppc64le-cpython-312/Bio/PDB 2025-11-20 00:44:38,223 root INFO copying Bio/PDB/ic_rebuild.py -> build/lib.linux-ppc64le-cpython-312/Bio/PDB 2025-11-20 00:44:38,224 root INFO copying Bio/PDB/__init__.py -> build/lib.linux-ppc64le-cpython-312/Bio/PDB 2025-11-20 00:44:38,224 root INFO copying Bio/PDB/FragmentMapper.py -> build/lib.linux-ppc64le-cpython-312/Bio/PDB 2025-11-20 00:44:38,224 root INFO copying Bio/PDB/HSExposure.py -> build/lib.linux-ppc64le-cpython-312/Bio/PDB 2025-11-20 00:44:38,225 root INFO copying Bio/PDB/ResidueDepth.py -> build/lib.linux-ppc64le-cpython-312/Bio/PDB 2025-11-20 00:44:38,225 root INFO copying Bio/PDB/parse_pdb_header.py -> build/lib.linux-ppc64le-cpython-312/Bio/PDB 2025-11-20 00:44:38,225 root INFO copying Bio/PDB/binary_cif.py -> build/lib.linux-ppc64le-cpython-312/Bio/PDB 2025-11-20 00:44:38,226 root INFO creating build/lib.linux-ppc64le-cpython-312/Bio/phenotype 2025-11-20 00:44:38,226 root INFO copying Bio/phenotype/pm_fitting.py -> build/lib.linux-ppc64le-cpython-312/Bio/phenotype 2025-11-20 00:44:38,226 root INFO copying Bio/phenotype/phen_micro.py -> build/lib.linux-ppc64le-cpython-312/Bio/phenotype 2025-11-20 00:44:38,227 root INFO copying Bio/phenotype/__init__.py -> build/lib.linux-ppc64le-cpython-312/Bio/phenotype 2025-11-20 00:44:38,227 root INFO creating build/lib.linux-ppc64le-cpython-312/Bio/PopGen 2025-11-20 00:44:38,227 root INFO copying Bio/PopGen/__init__.py -> build/lib.linux-ppc64le-cpython-312/Bio/PopGen 2025-11-20 00:44:38,228 root INFO creating build/lib.linux-ppc64le-cpython-312/Bio/PopGen/GenePop 2025-11-20 00:44:38,228 root INFO copying Bio/PopGen/GenePop/FileParser.py -> build/lib.linux-ppc64le-cpython-312/Bio/PopGen/GenePop 2025-11-20 00:44:38,228 root INFO copying Bio/PopGen/GenePop/Controller.py -> build/lib.linux-ppc64le-cpython-312/Bio/PopGen/GenePop 2025-11-20 00:44:38,229 root INFO copying Bio/PopGen/GenePop/LargeFileParser.py -> build/lib.linux-ppc64le-cpython-312/Bio/PopGen/GenePop 2025-11-20 00:44:38,229 root INFO copying Bio/PopGen/GenePop/EasyController.py -> build/lib.linux-ppc64le-cpython-312/Bio/PopGen/GenePop 2025-11-20 00:44:38,229 root INFO copying Bio/PopGen/GenePop/__init__.py -> build/lib.linux-ppc64le-cpython-312/Bio/PopGen/GenePop 2025-11-20 00:44:38,230 root INFO creating build/lib.linux-ppc64le-cpython-312/Bio/Restriction 2025-11-20 00:44:38,230 root INFO copying Bio/Restriction/Restriction.py -> build/lib.linux-ppc64le-cpython-312/Bio/Restriction 2025-11-20 00:44:38,230 root INFO copying Bio/Restriction/PrintFormat.py -> build/lib.linux-ppc64le-cpython-312/Bio/Restriction 2025-11-20 00:44:38,231 root INFO copying Bio/Restriction/Restriction_Dictionary.py -> build/lib.linux-ppc64le-cpython-312/Bio/Restriction 2025-11-20 00:44:38,231 root INFO copying Bio/Restriction/__init__.py -> build/lib.linux-ppc64le-cpython-312/Bio/Restriction 2025-11-20 00:44:38,232 root INFO creating build/lib.linux-ppc64le-cpython-312/Bio/SCOP 2025-11-20 00:44:38,232 root INFO copying Bio/SCOP/Dom.py -> build/lib.linux-ppc64le-cpython-312/Bio/SCOP 2025-11-20 00:44:38,232 root INFO copying Bio/SCOP/Residues.py -> build/lib.linux-ppc64le-cpython-312/Bio/SCOP 2025-11-20 00:44:38,233 root INFO copying Bio/SCOP/Hie.py -> build/lib.linux-ppc64le-cpython-312/Bio/SCOP 2025-11-20 00:44:38,233 root INFO copying Bio/SCOP/Cla.py -> build/lib.linux-ppc64le-cpython-312/Bio/SCOP 2025-11-20 00:44:38,233 root INFO copying Bio/SCOP/Raf.py -> build/lib.linux-ppc64le-cpython-312/Bio/SCOP 2025-11-20 00:44:38,234 root INFO copying Bio/SCOP/Des.py -> build/lib.linux-ppc64le-cpython-312/Bio/SCOP 2025-11-20 00:44:38,234 root INFO copying Bio/SCOP/__init__.py -> build/lib.linux-ppc64le-cpython-312/Bio/SCOP 2025-11-20 00:44:38,234 root INFO creating build/lib.linux-ppc64le-cpython-312/Bio/SearchIO 2025-11-20 00:44:38,235 root INFO copying Bio/SearchIO/_index.py -> build/lib.linux-ppc64le-cpython-312/Bio/SearchIO 2025-11-20 00:44:38,235 root INFO copying Bio/SearchIO/FastaIO.py -> build/lib.linux-ppc64le-cpython-312/Bio/SearchIO 2025-11-20 00:44:38,235 root INFO copying Bio/SearchIO/__init__.py -> build/lib.linux-ppc64le-cpython-312/Bio/SearchIO 2025-11-20 00:44:38,236 root INFO copying Bio/SearchIO/BlatIO.py -> build/lib.linux-ppc64le-cpython-312/Bio/SearchIO 2025-11-20 00:44:38,236 root INFO copying Bio/SearchIO/_utils.py -> build/lib.linux-ppc64le-cpython-312/Bio/SearchIO 2025-11-20 00:44:38,236 root INFO creating build/lib.linux-ppc64le-cpython-312/Bio/SearchIO/_model 2025-11-20 00:44:38,237 root INFO copying Bio/SearchIO/_model/hsp.py -> build/lib.linux-ppc64le-cpython-312/Bio/SearchIO/_model 2025-11-20 00:44:38,237 root INFO copying Bio/SearchIO/_model/_base.py -> build/lib.linux-ppc64le-cpython-312/Bio/SearchIO/_model 2025-11-20 00:44:38,237 root INFO copying Bio/SearchIO/_model/hit.py -> build/lib.linux-ppc64le-cpython-312/Bio/SearchIO/_model 2025-11-20 00:44:38,238 root INFO copying Bio/SearchIO/_model/query.py -> build/lib.linux-ppc64le-cpython-312/Bio/SearchIO/_model 2025-11-20 00:44:38,238 root INFO copying Bio/SearchIO/_model/__init__.py -> build/lib.linux-ppc64le-cpython-312/Bio/SearchIO/_model 2025-11-20 00:44:38,238 root INFO creating build/lib.linux-ppc64le-cpython-312/Bio/SearchIO/BlastIO 2025-11-20 00:44:38,239 root INFO copying Bio/SearchIO/BlastIO/blast_tab.py -> build/lib.linux-ppc64le-cpython-312/Bio/SearchIO/BlastIO 2025-11-20 00:44:38,239 root INFO copying Bio/SearchIO/BlastIO/blast_xml.py -> build/lib.linux-ppc64le-cpython-312/Bio/SearchIO/BlastIO 2025-11-20 00:44:38,239 root INFO copying Bio/SearchIO/BlastIO/__init__.py -> build/lib.linux-ppc64le-cpython-312/Bio/SearchIO/BlastIO 2025-11-20 00:44:38,240 root INFO creating build/lib.linux-ppc64le-cpython-312/Bio/SearchIO/HHsuiteIO 2025-11-20 00:44:38,240 root INFO copying Bio/SearchIO/HHsuiteIO/hhsuite2_text.py -> build/lib.linux-ppc64le-cpython-312/Bio/SearchIO/HHsuiteIO 2025-11-20 00:44:38,240 root INFO copying Bio/SearchIO/HHsuiteIO/__init__.py -> build/lib.linux-ppc64le-cpython-312/Bio/SearchIO/HHsuiteIO 2025-11-20 00:44:38,241 root INFO creating build/lib.linux-ppc64le-cpython-312/Bio/SearchIO/HmmerIO 2025-11-20 00:44:38,241 root INFO copying Bio/SearchIO/HmmerIO/hmmer3_domtab.py -> build/lib.linux-ppc64le-cpython-312/Bio/SearchIO/HmmerIO 2025-11-20 00:44:38,241 root INFO copying Bio/SearchIO/HmmerIO/_base.py -> build/lib.linux-ppc64le-cpython-312/Bio/SearchIO/HmmerIO 2025-11-20 00:44:38,242 root INFO copying Bio/SearchIO/HmmerIO/hmmer3_tab.py -> build/lib.linux-ppc64le-cpython-312/Bio/SearchIO/HmmerIO 2025-11-20 00:44:38,242 root INFO copying Bio/SearchIO/HmmerIO/hmmer2_text.py -> build/lib.linux-ppc64le-cpython-312/Bio/SearchIO/HmmerIO 2025-11-20 00:44:38,242 root INFO copying Bio/SearchIO/HmmerIO/__init__.py -> build/lib.linux-ppc64le-cpython-312/Bio/SearchIO/HmmerIO 2025-11-20 00:44:38,243 root INFO copying Bio/SearchIO/HmmerIO/hmmer3_text.py -> build/lib.linux-ppc64le-cpython-312/Bio/SearchIO/HmmerIO 2025-11-20 00:44:38,243 root INFO creating build/lib.linux-ppc64le-cpython-312/Bio/SearchIO/ExonerateIO 2025-11-20 00:44:38,243 root INFO copying Bio/SearchIO/ExonerateIO/_base.py -> build/lib.linux-ppc64le-cpython-312/Bio/SearchIO/ExonerateIO 2025-11-20 00:44:38,244 root INFO copying Bio/SearchIO/ExonerateIO/exonerate_text.py -> build/lib.linux-ppc64le-cpython-312/Bio/SearchIO/ExonerateIO 2025-11-20 00:44:38,244 root INFO copying Bio/SearchIO/ExonerateIO/__init__.py -> build/lib.linux-ppc64le-cpython-312/Bio/SearchIO/ExonerateIO 2025-11-20 00:44:38,244 root INFO copying Bio/SearchIO/ExonerateIO/exonerate_vulgar.py -> build/lib.linux-ppc64le-cpython-312/Bio/SearchIO/ExonerateIO 2025-11-20 00:44:38,245 root INFO copying Bio/SearchIO/ExonerateIO/exonerate_cigar.py -> build/lib.linux-ppc64le-cpython-312/Bio/SearchIO/ExonerateIO 2025-11-20 00:44:38,245 root INFO creating build/lib.linux-ppc64le-cpython-312/Bio/SearchIO/InterproscanIO 2025-11-20 00:44:38,245 root INFO copying Bio/SearchIO/InterproscanIO/interproscan_xml.py -> build/lib.linux-ppc64le-cpython-312/Bio/SearchIO/InterproscanIO 2025-11-20 00:44:38,246 root INFO copying Bio/SearchIO/InterproscanIO/__init__.py -> build/lib.linux-ppc64le-cpython-312/Bio/SearchIO/InterproscanIO 2025-11-20 00:44:38,246 root INFO creating build/lib.linux-ppc64le-cpython-312/Bio/SeqIO 2025-11-20 00:44:38,247 root INFO copying Bio/SeqIO/PirIO.py -> build/lib.linux-ppc64le-cpython-312/Bio/SeqIO 2025-11-20 00:44:38,247 root INFO copying Bio/SeqIO/SwissIO.py -> build/lib.linux-ppc64le-cpython-312/Bio/SeqIO 2025-11-20 00:44:38,247 root INFO copying Bio/SeqIO/InsdcIO.py -> build/lib.linux-ppc64le-cpython-312/Bio/SeqIO 2025-11-20 00:44:38,248 root INFO copying Bio/SeqIO/NibIO.py -> build/lib.linux-ppc64le-cpython-312/Bio/SeqIO 2025-11-20 00:44:38,248 root INFO copying Bio/SeqIO/PhdIO.py -> build/lib.linux-ppc64le-cpython-312/Bio/SeqIO 2025-11-20 00:44:38,248 root INFO copying Bio/SeqIO/_index.py -> build/lib.linux-ppc64le-cpython-312/Bio/SeqIO 2025-11-20 00:44:38,248 root INFO copying Bio/SeqIO/UniprotIO.py -> build/lib.linux-ppc64le-cpython-312/Bio/SeqIO 2025-11-20 00:44:38,249 root INFO copying Bio/SeqIO/FastaIO.py -> build/lib.linux-ppc64le-cpython-312/Bio/SeqIO 2025-11-20 00:44:38,249 root INFO copying Bio/SeqIO/TabIO.py -> build/lib.linux-ppc64le-cpython-312/Bio/SeqIO 2025-11-20 00:44:38,249 root INFO copying Bio/SeqIO/GckIO.py -> build/lib.linux-ppc64le-cpython-312/Bio/SeqIO 2025-11-20 00:44:38,250 root INFO copying Bio/SeqIO/PdbIO.py -> build/lib.linux-ppc64le-cpython-312/Bio/SeqIO 2025-11-20 00:44:38,250 root INFO copying Bio/SeqIO/SffIO.py -> build/lib.linux-ppc64le-cpython-312/Bio/SeqIO 2025-11-20 00:44:38,250 root INFO copying Bio/SeqIO/IgIO.py -> build/lib.linux-ppc64le-cpython-312/Bio/SeqIO 2025-11-20 00:44:38,251 root INFO copying Bio/SeqIO/GfaIO.py -> build/lib.linux-ppc64le-cpython-312/Bio/SeqIO 2025-11-20 00:44:38,251 root INFO copying Bio/SeqIO/SnapGeneIO.py -> build/lib.linux-ppc64le-cpython-312/Bio/SeqIO 2025-11-20 00:44:38,251 root INFO copying Bio/SeqIO/TwoBitIO.py -> build/lib.linux-ppc64le-cpython-312/Bio/SeqIO 2025-11-20 00:44:38,252 root INFO copying Bio/SeqIO/AceIO.py -> build/lib.linux-ppc64le-cpython-312/Bio/SeqIO 2025-11-20 00:44:38,252 root INFO copying Bio/SeqIO/QualityIO.py -> build/lib.linux-ppc64le-cpython-312/Bio/SeqIO 2025-11-20 00:44:38,252 root INFO copying Bio/SeqIO/__init__.py -> build/lib.linux-ppc64le-cpython-312/Bio/SeqIO 2025-11-20 00:44:38,253 root INFO copying Bio/SeqIO/SeqXmlIO.py -> build/lib.linux-ppc64le-cpython-312/Bio/SeqIO 2025-11-20 00:44:38,253 root INFO copying Bio/SeqIO/Interfaces.py -> build/lib.linux-ppc64le-cpython-312/Bio/SeqIO 2025-11-20 00:44:38,253 root INFO copying Bio/SeqIO/XdnaIO.py -> build/lib.linux-ppc64le-cpython-312/Bio/SeqIO 2025-11-20 00:44:38,254 root INFO copying Bio/SeqIO/AbiIO.py -> build/lib.linux-ppc64le-cpython-312/Bio/SeqIO 2025-11-20 00:44:38,254 root INFO creating build/lib.linux-ppc64le-cpython-312/Bio/SeqUtils 2025-11-20 00:44:38,254 root INFO copying Bio/SeqUtils/MeltingTemp.py -> build/lib.linux-ppc64le-cpython-312/Bio/SeqUtils 2025-11-20 00:44:38,255 root INFO copying Bio/SeqUtils/CheckSum.py -> build/lib.linux-ppc64le-cpython-312/Bio/SeqUtils 2025-11-20 00:44:38,255 root INFO copying Bio/SeqUtils/IsoelectricPoint.py -> build/lib.linux-ppc64le-cpython-312/Bio/SeqUtils 2025-11-20 00:44:38,255 root INFO copying Bio/SeqUtils/ProtParamData.py -> build/lib.linux-ppc64le-cpython-312/Bio/SeqUtils 2025-11-20 00:44:38,256 root INFO copying Bio/SeqUtils/lcc.py -> build/lib.linux-ppc64le-cpython-312/Bio/SeqUtils 2025-11-20 00:44:38,256 root INFO copying Bio/SeqUtils/__init__.py -> build/lib.linux-ppc64le-cpython-312/Bio/SeqUtils 2025-11-20 00:44:38,256 root INFO copying Bio/SeqUtils/ProtParam.py -> build/lib.linux-ppc64le-cpython-312/Bio/SeqUtils 2025-11-20 00:44:38,257 root INFO creating build/lib.linux-ppc64le-cpython-312/Bio/Sequencing 2025-11-20 00:44:38,257 root INFO copying Bio/Sequencing/Ace.py -> build/lib.linux-ppc64le-cpython-312/Bio/Sequencing 2025-11-20 00:44:38,257 root INFO copying Bio/Sequencing/Phd.py -> build/lib.linux-ppc64le-cpython-312/Bio/Sequencing 2025-11-20 00:44:38,258 root INFO copying Bio/Sequencing/__init__.py -> build/lib.linux-ppc64le-cpython-312/Bio/Sequencing 2025-11-20 00:44:38,258 root INFO creating build/lib.linux-ppc64le-cpython-312/Bio/Sequencing/Applications 2025-11-20 00:44:38,258 root INFO copying Bio/Sequencing/Applications/_Novoalign.py -> build/lib.linux-ppc64le-cpython-312/Bio/Sequencing/Applications 2025-11-20 00:44:38,259 root INFO copying Bio/Sequencing/Applications/_bwa.py -> build/lib.linux-ppc64le-cpython-312/Bio/Sequencing/Applications 2025-11-20 00:44:38,259 root INFO copying Bio/Sequencing/Applications/__init__.py -> build/lib.linux-ppc64le-cpython-312/Bio/Sequencing/Applications 2025-11-20 00:44:38,259 root INFO copying Bio/Sequencing/Applications/_samtools.py -> build/lib.linux-ppc64le-cpython-312/Bio/Sequencing/Applications 2025-11-20 00:44:38,260 root INFO creating build/lib.linux-ppc64le-cpython-312/Bio/SVDSuperimposer 2025-11-20 00:44:38,260 root INFO copying Bio/SVDSuperimposer/__init__.py -> build/lib.linux-ppc64le-cpython-312/Bio/SVDSuperimposer 2025-11-20 00:44:38,260 root INFO creating build/lib.linux-ppc64le-cpython-312/Bio/SwissProt 2025-11-20 00:44:38,261 root INFO copying Bio/SwissProt/KeyWList.py -> build/lib.linux-ppc64le-cpython-312/Bio/SwissProt 2025-11-20 00:44:38,261 root INFO copying Bio/SwissProt/__init__.py -> build/lib.linux-ppc64le-cpython-312/Bio/SwissProt 2025-11-20 00:44:38,261 root INFO creating build/lib.linux-ppc64le-cpython-312/Bio/TogoWS 2025-11-20 00:44:38,261 root INFO copying Bio/TogoWS/__init__.py -> build/lib.linux-ppc64le-cpython-312/Bio/TogoWS 2025-11-20 00:44:38,262 root INFO creating build/lib.linux-ppc64le-cpython-312/Bio/Phylo 2025-11-20 00:44:38,262 root INFO copying Bio/Phylo/Newick.py -> build/lib.linux-ppc64le-cpython-312/Bio/Phylo 2025-11-20 00:44:38,263 root INFO copying Bio/Phylo/NexusIO.py -> build/lib.linux-ppc64le-cpython-312/Bio/Phylo 2025-11-20 00:44:38,263 root INFO copying Bio/Phylo/_io.py -> build/lib.linux-ppc64le-cpython-312/Bio/Phylo 2025-11-20 00:44:38,263 root INFO copying Bio/Phylo/Consensus.py -> build/lib.linux-ppc64le-cpython-312/Bio/Phylo 2025-11-20 00:44:38,264 root INFO copying Bio/Phylo/TreeConstruction.py -> build/lib.linux-ppc64le-cpython-312/Bio/Phylo 2025-11-20 00:44:38,264 root INFO copying Bio/Phylo/PhyloXMLIO.py -> build/lib.linux-ppc64le-cpython-312/Bio/Phylo 2025-11-20 00:44:38,264 root INFO copying Bio/Phylo/CDAOIO.py -> build/lib.linux-ppc64le-cpython-312/Bio/Phylo 2025-11-20 00:44:38,265 root INFO copying Bio/Phylo/CDAO.py -> build/lib.linux-ppc64le-cpython-312/Bio/Phylo 2025-11-20 00:44:38,265 root INFO copying Bio/Phylo/NewickIO.py -> build/lib.linux-ppc64le-cpython-312/Bio/Phylo 2025-11-20 00:44:38,265 root INFO copying Bio/Phylo/NeXMLIO.py -> build/lib.linux-ppc64le-cpython-312/Bio/Phylo 2025-11-20 00:44:38,266 root INFO copying Bio/Phylo/BaseTree.py -> build/lib.linux-ppc64le-cpython-312/Bio/Phylo 2025-11-20 00:44:38,266 root INFO copying Bio/Phylo/NeXML.py -> build/lib.linux-ppc64le-cpython-312/Bio/Phylo 2025-11-20 00:44:38,266 root INFO copying Bio/Phylo/_cdao_owl.py -> build/lib.linux-ppc64le-cpython-312/Bio/Phylo 2025-11-20 00:44:38,267 root INFO copying Bio/Phylo/__init__.py -> build/lib.linux-ppc64le-cpython-312/Bio/Phylo 2025-11-20 00:44:38,267 root INFO copying Bio/Phylo/PhyloXML.py -> build/lib.linux-ppc64le-cpython-312/Bio/Phylo 2025-11-20 00:44:38,267 root INFO copying Bio/Phylo/_utils.py -> build/lib.linux-ppc64le-cpython-312/Bio/Phylo 2025-11-20 00:44:38,268 root INFO creating build/lib.linux-ppc64le-cpython-312/Bio/Phylo/Applications 2025-11-20 00:44:38,268 root INFO copying Bio/Phylo/Applications/_Phyml.py -> build/lib.linux-ppc64le-cpython-312/Bio/Phylo/Applications 2025-11-20 00:44:38,268 root INFO copying Bio/Phylo/Applications/_Fasttree.py -> build/lib.linux-ppc64le-cpython-312/Bio/Phylo/Applications 2025-11-20 00:44:38,269 root INFO copying Bio/Phylo/Applications/__init__.py -> build/lib.linux-ppc64le-cpython-312/Bio/Phylo/Applications 2025-11-20 00:44:38,269 root INFO copying Bio/Phylo/Applications/_Raxml.py -> build/lib.linux-ppc64le-cpython-312/Bio/Phylo/Applications 2025-11-20 00:44:38,270 root INFO creating build/lib.linux-ppc64le-cpython-312/Bio/Phylo/PAML 2025-11-20 00:44:38,270 root INFO copying Bio/Phylo/PAML/_parse_baseml.py -> build/lib.linux-ppc64le-cpython-312/Bio/Phylo/PAML 2025-11-20 00:44:38,270 root INFO copying Bio/Phylo/PAML/codeml.py -> build/lib.linux-ppc64le-cpython-312/Bio/Phylo/PAML 2025-11-20 00:44:38,271 root INFO copying Bio/Phylo/PAML/_parse_codeml.py -> build/lib.linux-ppc64le-cpython-312/Bio/Phylo/PAML 2025-11-20 00:44:38,271 root INFO copying Bio/Phylo/PAML/chi2.py -> build/lib.linux-ppc64le-cpython-312/Bio/Phylo/PAML 2025-11-20 00:44:38,271 root INFO copying Bio/Phylo/PAML/baseml.py -> build/lib.linux-ppc64le-cpython-312/Bio/Phylo/PAML 2025-11-20 00:44:38,271 root INFO copying Bio/Phylo/PAML/__init__.py -> build/lib.linux-ppc64le-cpython-312/Bio/Phylo/PAML 2025-11-20 00:44:38,272 root INFO copying Bio/Phylo/PAML/_paml.py -> build/lib.linux-ppc64le-cpython-312/Bio/Phylo/PAML 2025-11-20 00:44:38,272 root INFO copying Bio/Phylo/PAML/_parse_yn00.py -> build/lib.linux-ppc64le-cpython-312/Bio/Phylo/PAML 2025-11-20 00:44:38,272 root INFO copying Bio/Phylo/PAML/yn00.py -> build/lib.linux-ppc64le-cpython-312/Bio/Phylo/PAML 2025-11-20 00:44:38,273 root INFO creating build/lib.linux-ppc64le-cpython-312/Bio/UniGene 2025-11-20 00:44:38,273 root INFO copying Bio/UniGene/__init__.py -> build/lib.linux-ppc64le-cpython-312/Bio/UniGene 2025-11-20 00:44:38,273 root INFO creating build/lib.linux-ppc64le-cpython-312/Bio/UniProt 2025-11-20 00:44:38,274 root INFO copying Bio/UniProt/GOA.py -> build/lib.linux-ppc64le-cpython-312/Bio/UniProt 2025-11-20 00:44:38,274 root INFO copying Bio/UniProt/__init__.py -> build/lib.linux-ppc64le-cpython-312/Bio/UniProt 2025-11-20 00:44:38,274 root INFO creating build/lib.linux-ppc64le-cpython-312/BioSQL 2025-11-20 00:44:38,275 root INFO copying BioSQL/DBUtils.py -> build/lib.linux-ppc64le-cpython-312/BioSQL 2025-11-20 00:44:38,275 root INFO copying BioSQL/BioSeqDatabase.py -> build/lib.linux-ppc64le-cpython-312/BioSQL 2025-11-20 00:44:38,275 root INFO copying BioSQL/Loader.py -> build/lib.linux-ppc64le-cpython-312/BioSQL 2025-11-20 00:44:38,276 root INFO copying BioSQL/__init__.py -> build/lib.linux-ppc64le-cpython-312/BioSQL 2025-11-20 00:44:38,276 root INFO copying BioSQL/BioSeq.py -> build/lib.linux-ppc64le-cpython-312/BioSQL 2025-11-20 00:44:38,277 root INFO running egg_info 2025-11-20 00:44:38,282 root INFO writing biopython.egg-info/PKG-INFO 2025-11-20 00:44:38,283 root INFO writing dependency_links to biopython.egg-info/dependency_links.txt 2025-11-20 00:44:38,283 root INFO writing requirements to biopython.egg-info/requires.txt 2025-11-20 00:44:38,283 root INFO writing top-level names to biopython.egg-info/top_level.txt 2025-11-20 00:44:38,316 root INFO reading manifest file 'biopython.egg-info/SOURCES.txt' 2025-11-20 00:44:38,417 root INFO reading manifest template 'MANIFEST.in' 2025-11-20 00:44:38,586 root WARNING warning: no previously-included files found matching 'Doc/_build' 2025-11-20 00:44:38,598 root WARNING warning: no previously-included files found matching 'Tests/Gck/DGVC_GCK.zip' 2025-11-20 00:44:38,605 root WARNING warning: no previously-included files matching '*.pyc' found anywhere in distribution 2025-11-20 00:44:38,612 root WARNING warning: no previously-included files matching '*.pyo' found anywhere in distribution 2025-11-20 00:44:38,619 root WARNING warning: no previously-included files matching '*.py{}' found anywhere in distribution 2025-11-20 00:44:38,626 root WARNING warning: no previously-included files matching '*.py-e' found anywhere in distribution 2025-11-20 00:44:38,640 root WARNING warning: no previously-included files found matching 'Bio/Align/substitution_matrices/data/README.txt' 2025-11-20 00:44:38,640 root INFO adding license file 'LICENSE' 2025-11-20 00:44:38,640 root INFO adding license file 'LICENSE.rst' 2025-11-20 00:44:38,739 root INFO writing manifest file 'biopython.egg-info/SOURCES.txt' /usr/lib/python3.12/site-packages/setuptools/command/build_py.py:212: _Warning: Package 'Bio.Align.substitution_matrices.data' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'Bio.Align.substitution_matrices.data' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'Bio.Align.substitution_matrices.data' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'Bio.Align.substitution_matrices.data' to be distributed and are already explicitly excluding 'Bio.Align.substitution_matrices.data' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3.12/site-packages/setuptools/command/build_py.py:212: _Warning: Package 'Bio.Entrez.DTDs' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'Bio.Entrez.DTDs' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'Bio.Entrez.DTDs' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'Bio.Entrez.DTDs' to be distributed and are already explicitly excluding 'Bio.Entrez.DTDs' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3.12/site-packages/setuptools/command/build_py.py:212: _Warning: Package 'Bio.Entrez.XSDs' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'Bio.Entrez.XSDs' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'Bio.Entrez.XSDs' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'Bio.Entrez.XSDs' to be distributed and are already explicitly excluding 'Bio.Entrez.XSDs' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) 2025-11-20 00:44:38,820 root INFO copying Bio/cpairwise2module.c -> build/lib.linux-ppc64le-cpython-312/Bio 2025-11-20 00:44:38,820 root INFO copying Bio/py.typed -> build/lib.linux-ppc64le-cpython-312/Bio 2025-11-20 00:44:38,821 root INFO copying Bio/Align/_aligncore.c -> build/lib.linux-ppc64le-cpython-312/Bio/Align 2025-11-20 00:44:38,821 root INFO copying Bio/Align/_codonaligner.c -> build/lib.linux-ppc64le-cpython-312/Bio/Align 2025-11-20 00:44:38,822 root INFO copying Bio/Align/_pairwisealigner.c -> build/lib.linux-ppc64le-cpython-312/Bio/Align 2025-11-20 00:44:38,822 root INFO creating build/lib.linux-ppc64le-cpython-312/Bio/Align/substitution_matrices/data 2025-11-20 00:44:38,822 root INFO copying Bio/Align/substitution_matrices/data/BENNER22 -> build/lib.linux-ppc64le-cpython-312/Bio/Align/substitution_matrices/data 2025-11-20 00:44:38,823 root INFO copying Bio/Align/substitution_matrices/data/BENNER6 -> build/lib.linux-ppc64le-cpython-312/Bio/Align/substitution_matrices/data 2025-11-20 00:44:38,823 root INFO copying Bio/Align/substitution_matrices/data/BENNER74 -> build/lib.linux-ppc64le-cpython-312/Bio/Align/substitution_matrices/data 2025-11-20 00:44:38,823 root INFO copying Bio/Align/substitution_matrices/data/BLASTN -> build/lib.linux-ppc64le-cpython-312/Bio/Align/substitution_matrices/data 2025-11-20 00:44:38,824 root INFO copying Bio/Align/substitution_matrices/data/BLASTP -> build/lib.linux-ppc64le-cpython-312/Bio/Align/substitution_matrices/data 2025-11-20 00:44:38,824 root INFO copying Bio/Align/substitution_matrices/data/BLOSUM45 -> build/lib.linux-ppc64le-cpython-312/Bio/Align/substitution_matrices/data 2025-11-20 00:44:38,824 root INFO copying Bio/Align/substitution_matrices/data/BLOSUM50 -> build/lib.linux-ppc64le-cpython-312/Bio/Align/substitution_matrices/data 2025-11-20 00:44:38,825 root INFO copying Bio/Align/substitution_matrices/data/BLOSUM62 -> build/lib.linux-ppc64le-cpython-312/Bio/Align/substitution_matrices/data 2025-11-20 00:44:38,825 root INFO copying Bio/Align/substitution_matrices/data/BLOSUM80 -> build/lib.linux-ppc64le-cpython-312/Bio/Align/substitution_matrices/data 2025-11-20 00:44:38,825 root INFO copying Bio/Align/substitution_matrices/data/BLOSUM90 -> build/lib.linux-ppc64le-cpython-312/Bio/Align/substitution_matrices/data 2025-11-20 00:44:38,826 root INFO copying Bio/Align/substitution_matrices/data/DAYHOFF -> build/lib.linux-ppc64le-cpython-312/Bio/Align/substitution_matrices/data 2025-11-20 00:44:38,826 root INFO copying Bio/Align/substitution_matrices/data/FENG -> build/lib.linux-ppc64le-cpython-312/Bio/Align/substitution_matrices/data 2025-11-20 00:44:38,826 root INFO copying Bio/Align/substitution_matrices/data/GENETIC -> build/lib.linux-ppc64le-cpython-312/Bio/Align/substitution_matrices/data 2025-11-20 00:44:38,827 root INFO copying Bio/Align/substitution_matrices/data/GONNET1992 -> build/lib.linux-ppc64le-cpython-312/Bio/Align/substitution_matrices/data 2025-11-20 00:44:38,827 root INFO copying Bio/Align/substitution_matrices/data/HOXD70 -> build/lib.linux-ppc64le-cpython-312/Bio/Align/substitution_matrices/data 2025-11-20 00:44:38,827 root INFO copying Bio/Align/substitution_matrices/data/JOHNSON -> build/lib.linux-ppc64le-cpython-312/Bio/Align/substitution_matrices/data 2025-11-20 00:44:38,828 root INFO copying Bio/Align/substitution_matrices/data/JONES -> build/lib.linux-ppc64le-cpython-312/Bio/Align/substitution_matrices/data 2025-11-20 00:44:38,828 root INFO copying Bio/Align/substitution_matrices/data/LEVIN -> build/lib.linux-ppc64le-cpython-312/Bio/Align/substitution_matrices/data 2025-11-20 00:44:38,829 root INFO copying Bio/Align/substitution_matrices/data/MCLACHLAN -> build/lib.linux-ppc64le-cpython-312/Bio/Align/substitution_matrices/data 2025-11-20 00:44:38,829 root INFO copying Bio/Align/substitution_matrices/data/MDM78 -> build/lib.linux-ppc64le-cpython-312/Bio/Align/substitution_matrices/data 2025-11-20 00:44:38,829 root INFO copying Bio/Align/substitution_matrices/data/MEGABLAST -> build/lib.linux-ppc64le-cpython-312/Bio/Align/substitution_matrices/data 2025-11-20 00:44:38,830 root INFO copying Bio/Align/substitution_matrices/data/NUC.4.4 -> build/lib.linux-ppc64le-cpython-312/Bio/Align/substitution_matrices/data 2025-11-20 00:44:38,830 root INFO copying Bio/Align/substitution_matrices/data/PAM250 -> build/lib.linux-ppc64le-cpython-312/Bio/Align/substitution_matrices/data 2025-11-20 00:44:38,830 root INFO copying Bio/Align/substitution_matrices/data/PAM30 -> build/lib.linux-ppc64le-cpython-312/Bio/Align/substitution_matrices/data 2025-11-20 00:44:38,831 root INFO copying Bio/Align/substitution_matrices/data/PAM70 -> build/lib.linux-ppc64le-cpython-312/Bio/Align/substitution_matrices/data 2025-11-20 00:44:38,831 root INFO copying Bio/Align/substitution_matrices/data/RAO -> build/lib.linux-ppc64le-cpython-312/Bio/Align/substitution_matrices/data 2025-11-20 00:44:38,831 root INFO copying Bio/Align/substitution_matrices/data/RISLER -> build/lib.linux-ppc64le-cpython-312/Bio/Align/substitution_matrices/data 2025-11-20 00:44:38,832 root INFO copying Bio/Align/substitution_matrices/data/SCHNEIDER -> build/lib.linux-ppc64le-cpython-312/Bio/Align/substitution_matrices/data 2025-11-20 00:44:38,832 root INFO copying Bio/Align/substitution_matrices/data/STR -> build/lib.linux-ppc64le-cpython-312/Bio/Align/substitution_matrices/data 2025-11-20 00:44:38,832 root INFO copying Bio/Align/substitution_matrices/data/TRANS -> build/lib.linux-ppc64le-cpython-312/Bio/Align/substitution_matrices/data 2025-11-20 00:44:38,833 root INFO copying Bio/Cluster/cluster.c -> build/lib.linux-ppc64le-cpython-312/Bio/Cluster 2025-11-20 00:44:38,833 root INFO copying Bio/Cluster/cluster.h -> build/lib.linux-ppc64le-cpython-312/Bio/Cluster 2025-11-20 00:44:38,833 root INFO copying Bio/Cluster/clustermodule.c -> build/lib.linux-ppc64le-cpython-312/Bio/Cluster 2025-11-20 00:44:38,834 root INFO creating build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,834 root INFO copying Bio/Entrez/DTDs/BITS-embedded-index2.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,834 root INFO copying Bio/Entrez/DTDs/BITS-question-answer2.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,835 root INFO copying Bio/Entrez/DTDs/Docsum_3_0.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,835 root INFO copying Bio/Entrez/DTDs/Docsum_3_0.mod.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,835 root INFO copying Bio/Entrez/DTDs/Docsum_3_1.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,836 root INFO copying Bio/Entrez/DTDs/Docsum_3_1.mod.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,836 root INFO copying Bio/Entrez/DTDs/Docsum_3_2.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,836 root INFO copying Bio/Entrez/DTDs/Docsum_3_2.mod.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,837 root INFO copying Bio/Entrez/DTDs/Docsum_3_3.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,837 root INFO copying Bio/Entrez/DTDs/Docsum_3_3.mod.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,837 root INFO copying Bio/Entrez/DTDs/Docsum_3_4.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,838 root INFO copying Bio/Entrez/DTDs/Docsum_3_4.mod.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,838 root INFO copying Bio/Entrez/DTDs/EMBL_General.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,839 root INFO copying Bio/Entrez/DTDs/EMBL_General.mod.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,839 root INFO copying Bio/Entrez/DTDs/GenBank_General.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,839 root INFO copying Bio/Entrez/DTDs/GenBank_General.mod.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,840 root INFO copying Bio/Entrez/DTDs/HomoloGene.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,840 root INFO copying Bio/Entrez/DTDs/HomoloGene.mod.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,840 root INFO copying Bio/Entrez/DTDs/INSD_INSDSeq.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,841 root INFO copying Bio/Entrez/DTDs/INSD_INSDSeq.mod.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,841 root INFO copying Bio/Entrez/DTDs/JATS-XHTMLtablesetup1-3.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,841 root INFO copying Bio/Entrez/DTDs/JATS-ali-namespace1-3.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,842 root INFO copying Bio/Entrez/DTDs/JATS-archivearticle1-3-mathml3.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,842 root INFO copying Bio/Entrez/DTDs/JATS-archivecustom-classes1-3.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,842 root INFO copying Bio/Entrez/DTDs/JATS-archivecustom-mixes1-3.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,843 root INFO copying Bio/Entrez/DTDs/JATS-archivecustom-models1-3.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,843 root INFO copying Bio/Entrez/DTDs/JATS-archivecustom-modules1-3.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,843 root INFO copying Bio/Entrez/DTDs/JATS-articlemeta1-3.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,844 root INFO copying Bio/Entrez/DTDs/JATS-backmatter1-3.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,844 root INFO copying Bio/Entrez/DTDs/JATS-chars1-3.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,844 root INFO copying Bio/Entrez/DTDs/JATS-common-atts1-3.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,845 root INFO copying Bio/Entrez/DTDs/JATS-common1-3.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,845 root INFO copying Bio/Entrez/DTDs/JATS-default-classes1-3.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,846 root INFO copying Bio/Entrez/DTDs/JATS-default-mixes1-3.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,846 root INFO copying Bio/Entrez/DTDs/JATS-display1-3.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,846 root INFO copying Bio/Entrez/DTDs/JATS-format1-3.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,847 root INFO copying Bio/Entrez/DTDs/JATS-funding1-3.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,847 root INFO copying Bio/Entrez/DTDs/JATS-journalmeta1-3.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,848 root INFO copying Bio/Entrez/DTDs/JATS-link1-3.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,848 root INFO copying Bio/Entrez/DTDs/JATS-list1-3.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,848 root INFO copying Bio/Entrez/DTDs/JATS-math1-3.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,849 root INFO copying Bio/Entrez/DTDs/JATS-mathml3-mathmlsetup1-3.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,849 root INFO copying Bio/Entrez/DTDs/JATS-mathml3-modules1-3.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,849 root INFO copying Bio/Entrez/DTDs/JATS-modules1-3.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,850 root INFO copying Bio/Entrez/DTDs/JATS-nlmcitation1-3.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,850 root INFO copying Bio/Entrez/DTDs/JATS-notat1-3.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,850 root INFO copying Bio/Entrez/DTDs/JATS-para1-3.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,851 root INFO copying Bio/Entrez/DTDs/JATS-phrase1-3.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,851 root INFO copying Bio/Entrez/DTDs/JATS-references1-3.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,852 root INFO copying Bio/Entrez/DTDs/JATS-related-object1-3.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,852 root INFO copying Bio/Entrez/DTDs/JATS-section1-3.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,852 root INFO copying Bio/Entrez/DTDs/JATS-xmlspecchars1-3.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,853 root INFO copying Bio/Entrez/DTDs/MMDB.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,853 root INFO copying Bio/Entrez/DTDs/MMDB.mod.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,853 root INFO copying Bio/Entrez/DTDs/MMDB_Chemical_graph.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,854 root INFO copying Bio/Entrez/DTDs/MMDB_Chemical_graph.mod.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,854 root INFO copying Bio/Entrez/DTDs/MMDB_Features.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,854 root INFO copying Bio/Entrez/DTDs/MMDB_Features.mod.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,855 root INFO copying Bio/Entrez/DTDs/MMDB_Structural_model.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,855 root INFO copying Bio/Entrez/DTDs/MMDB_Structural_model.mod.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,855 root INFO copying Bio/Entrez/DTDs/NCBI_Access.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,856 root INFO copying Bio/Entrez/DTDs/NCBI_Access.mod.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,856 root INFO copying Bio/Entrez/DTDs/NCBI_Biblio.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,856 root INFO copying Bio/Entrez/DTDs/NCBI_Biblio.mod.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,857 root INFO copying Bio/Entrez/DTDs/NCBI_BioSource.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,857 root INFO copying Bio/Entrez/DTDs/NCBI_BioSource.mod.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,857 root INFO copying Bio/Entrez/DTDs/NCBI_BioTree.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,858 root INFO copying Bio/Entrez/DTDs/NCBI_BioTree.mod.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,858 root INFO copying Bio/Entrez/DTDs/NCBI_Blast4.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,858 root INFO copying Bio/Entrez/DTDs/NCBI_Blast4.mod.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,859 root INFO copying Bio/Entrez/DTDs/NCBI_BlastDL.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,859 root INFO copying Bio/Entrez/DTDs/NCBI_BlastDL.mod.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,859 root INFO copying Bio/Entrez/DTDs/NCBI_BlastOutput.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,860 root INFO copying Bio/Entrez/DTDs/NCBI_BlastOutput.mod.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,860 root INFO copying Bio/Entrez/DTDs/NCBI_Cdd.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,860 root INFO copying Bio/Entrez/DTDs/NCBI_Cdd.mod.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,861 root INFO copying Bio/Entrez/DTDs/NCBI_Cn3d.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,861 root INFO copying Bio/Entrez/DTDs/NCBI_Cn3d.mod.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,861 root INFO copying Bio/Entrez/DTDs/NCBI_Entity.mod.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,862 root INFO copying Bio/Entrez/DTDs/NCBI_Entrez2.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,862 root INFO copying Bio/Entrez/DTDs/NCBI_Entrez2.mod.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,862 root INFO copying Bio/Entrez/DTDs/NCBI_Entrezgene.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,863 root INFO copying Bio/Entrez/DTDs/NCBI_Entrezgene.mod.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,863 root INFO copying Bio/Entrez/DTDs/NCBI_FeatDef.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,863 root INFO copying Bio/Entrez/DTDs/NCBI_FeatDef.mod.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,864 root INFO copying Bio/Entrez/DTDs/NCBI_GBSeq.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,864 root INFO copying Bio/Entrez/DTDs/NCBI_GBSeq.mod.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,864 root INFO copying Bio/Entrez/DTDs/NCBI_Gene.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,865 root INFO copying Bio/Entrez/DTDs/NCBI_Gene.mod.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,865 root INFO copying Bio/Entrez/DTDs/NCBI_General.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,865 root INFO copying Bio/Entrez/DTDs/NCBI_General.mod.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,866 root INFO copying Bio/Entrez/DTDs/NCBI_ID1Access.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,866 root INFO copying Bio/Entrez/DTDs/NCBI_ID1Access.mod.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,866 root INFO copying Bio/Entrez/DTDs/NCBI_ID2Access.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,867 root INFO copying Bio/Entrez/DTDs/NCBI_ID2Access.mod.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,867 root INFO copying Bio/Entrez/DTDs/NCBI_MedArchive.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,868 root INFO copying Bio/Entrez/DTDs/NCBI_MedArchive.mod.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,868 root INFO copying Bio/Entrez/DTDs/NCBI_Medlars.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,868 root INFO copying Bio/Entrez/DTDs/NCBI_Medlars.mod.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,869 root INFO copying Bio/Entrez/DTDs/NCBI_Medline.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,869 root INFO copying Bio/Entrez/DTDs/NCBI_Medline.mod.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,869 root INFO copying Bio/Entrez/DTDs/NCBI_Mim.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,870 root INFO copying Bio/Entrez/DTDs/NCBI_Mim.mod.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,870 root INFO copying Bio/Entrez/DTDs/NCBI_Mime.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,870 root INFO copying Bio/Entrez/DTDs/NCBI_Mime.mod.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,871 root INFO copying Bio/Entrez/DTDs/NCBI_ObjPrt.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,871 root INFO copying Bio/Entrez/DTDs/NCBI_ObjPrt.mod.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,871 root INFO copying Bio/Entrez/DTDs/NCBI_Organism.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,872 root INFO copying Bio/Entrez/DTDs/NCBI_Organism.mod.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,872 root INFO copying Bio/Entrez/DTDs/NCBI_PCAssay.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,872 root INFO copying Bio/Entrez/DTDs/NCBI_PCAssay.mod.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,873 root INFO copying Bio/Entrez/DTDs/NCBI_PCSubstance.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,873 root INFO copying Bio/Entrez/DTDs/NCBI_PCSubstance.mod.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,873 root INFO copying Bio/Entrez/DTDs/NCBI_Project.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,874 root INFO copying Bio/Entrez/DTDs/NCBI_Project.mod.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,874 root INFO copying Bio/Entrez/DTDs/NCBI_Protein.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,874 root INFO copying Bio/Entrez/DTDs/NCBI_Protein.mod.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,875 root INFO copying Bio/Entrez/DTDs/NCBI_Pub.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,875 root INFO copying Bio/Entrez/DTDs/NCBI_Pub.mod.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,875 root INFO copying Bio/Entrez/DTDs/NCBI_PubMed.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,876 root INFO copying Bio/Entrez/DTDs/NCBI_PubMed.mod.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,876 root INFO copying Bio/Entrez/DTDs/NCBI_RNA.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,876 root INFO copying Bio/Entrez/DTDs/NCBI_RNA.mod.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,877 root INFO copying Bio/Entrez/DTDs/NCBI_Remap.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,877 root INFO copying Bio/Entrez/DTDs/NCBI_Remap.mod.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,877 root INFO copying Bio/Entrez/DTDs/NCBI_Rsite.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,878 root INFO copying Bio/Entrez/DTDs/NCBI_Rsite.mod.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,878 root INFO copying Bio/Entrez/DTDs/NCBI_ScoreMat.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,878 root INFO copying Bio/Entrez/DTDs/NCBI_ScoreMat.mod.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,879 root INFO copying Bio/Entrez/DTDs/NCBI_SeqCode.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,879 root INFO copying Bio/Entrez/DTDs/NCBI_SeqCode.mod.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,879 root INFO copying Bio/Entrez/DTDs/NCBI_SeqTable.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,880 root INFO copying Bio/Entrez/DTDs/NCBI_SeqTable.mod.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,880 root INFO copying Bio/Entrez/DTDs/NCBI_Seq_split.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,880 root INFO copying Bio/Entrez/DTDs/NCBI_Seq_split.mod.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,881 root INFO copying Bio/Entrez/DTDs/NCBI_Seqalign.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,881 root INFO copying Bio/Entrez/DTDs/NCBI_Seqalign.mod.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,881 root INFO copying Bio/Entrez/DTDs/NCBI_Seqfeat.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,882 root INFO copying Bio/Entrez/DTDs/NCBI_Seqfeat.mod.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,882 root INFO copying Bio/Entrez/DTDs/NCBI_Seqloc.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,882 root INFO copying Bio/Entrez/DTDs/NCBI_Seqloc.mod.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,883 root INFO copying Bio/Entrez/DTDs/NCBI_Seqres.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,883 root INFO copying Bio/Entrez/DTDs/NCBI_Seqres.mod.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,883 root INFO copying Bio/Entrez/DTDs/NCBI_Seqset.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,884 root INFO copying Bio/Entrez/DTDs/NCBI_Seqset.mod.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,884 root INFO copying Bio/Entrez/DTDs/NCBI_Sequence.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,884 root INFO copying Bio/Entrez/DTDs/NCBI_Sequence.mod.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,885 root INFO copying Bio/Entrez/DTDs/NCBI_Submit.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,885 root INFO copying Bio/Entrez/DTDs/NCBI_Submit.mod.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,886 root INFO copying Bio/Entrez/DTDs/NCBI_Systems.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,886 root INFO copying Bio/Entrez/DTDs/NCBI_TSeq.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,886 root INFO copying Bio/Entrez/DTDs/NCBI_TSeq.mod.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,886 root INFO copying Bio/Entrez/DTDs/NCBI_TxInit.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,887 root INFO copying Bio/Entrez/DTDs/NCBI_TxInit.mod.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,887 root INFO copying Bio/Entrez/DTDs/NCBI_Variation.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,887 root INFO copying Bio/Entrez/DTDs/NCBI_Variation.mod.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,888 root INFO copying Bio/Entrez/DTDs/NCBI_all.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,888 root INFO copying Bio/Entrez/DTDs/NSE.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,888 root INFO copying Bio/Entrez/DTDs/NSE.mod.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,889 root INFO copying Bio/Entrez/DTDs/OMSSA.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,889 root INFO copying Bio/Entrez/DTDs/OMSSA.mod.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,890 root INFO copying Bio/Entrez/DTDs/PDB_General.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,890 root INFO copying Bio/Entrez/DTDs/PDB_General.mod.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,890 root INFO copying Bio/Entrez/DTDs/PIR_General.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,891 root INFO copying Bio/Entrez/DTDs/PIR_General.mod.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,891 root INFO copying Bio/Entrez/DTDs/PRF_General.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,891 root INFO copying Bio/Entrez/DTDs/PRF_General.mod.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,891 root INFO copying Bio/Entrez/DTDs/SP_General.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,892 root INFO copying Bio/Entrez/DTDs/SP_General.mod.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,892 root INFO copying Bio/Entrez/DTDs/XHTMLtablesetup.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,892 root INFO copying Bio/Entrez/DTDs/archivearticle.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,893 root INFO copying Bio/Entrez/DTDs/archivecustom-classes.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,893 root INFO copying Bio/Entrez/DTDs/archivecustom-mixes.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,894 root INFO copying Bio/Entrez/DTDs/archivecustom-models.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,894 root INFO copying Bio/Entrez/DTDs/archivecustom-modules.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,894 root INFO copying Bio/Entrez/DTDs/articlemeta.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,895 root INFO copying Bio/Entrez/DTDs/backmatter.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,895 root INFO copying Bio/Entrez/DTDs/bookdoc_100301.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,895 root INFO copying Bio/Entrez/DTDs/bookdoc_110101.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,896 root INFO copying Bio/Entrez/DTDs/bookdoc_120101.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,896 root INFO copying Bio/Entrez/DTDs/bookdoc_130101.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,896 root INFO copying Bio/Entrez/DTDs/bookdoc_140101.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,897 root INFO copying Bio/Entrez/DTDs/bookdoc_150101.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,897 root INFO copying Bio/Entrez/DTDs/chars.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,897 root INFO copying Bio/Entrez/DTDs/common.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,898 root INFO copying Bio/Entrez/DTDs/default-classes.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,898 root INFO copying Bio/Entrez/DTDs/default-mixes.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,898 root INFO copying Bio/Entrez/DTDs/display.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,899 root INFO copying Bio/Entrez/DTDs/eInfo_020511.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,899 root INFO copying Bio/Entrez/DTDs/eLink_090910.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,899 root INFO copying Bio/Entrez/DTDs/eLink_101123.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,900 root INFO copying Bio/Entrez/DTDs/ePost_020511.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,900 root INFO copying Bio/Entrez/DTDs/eSearch_020511.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,900 root INFO copying Bio/Entrez/DTDs/eSpell.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,901 root INFO copying Bio/Entrez/DTDs/eSummary_041029.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,901 root INFO copying Bio/Entrez/DTDs/egquery.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,901 root INFO copying Bio/Entrez/DTDs/einfo.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,902 root INFO copying Bio/Entrez/DTDs/elink.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,902 root INFO copying Bio/Entrez/DTDs/elink_020122.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,902 root INFO copying Bio/Entrez/DTDs/epost.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,903 root INFO copying Bio/Entrez/DTDs/esearch.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,903 root INFO copying Bio/Entrez/DTDs/esummary-v1.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,903 root INFO copying Bio/Entrez/DTDs/esummary_clinvar.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,904 root INFO copying Bio/Entrez/DTDs/esummary_gene.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,904 root INFO copying Bio/Entrez/DTDs/format.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,904 root INFO copying Bio/Entrez/DTDs/htmltable.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,905 root INFO copying Bio/Entrez/DTDs/isoamsa.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,905 root INFO copying Bio/Entrez/DTDs/isoamsb.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,905 root INFO copying Bio/Entrez/DTDs/isoamsc.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,906 root INFO copying Bio/Entrez/DTDs/isoamsn.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,906 root INFO copying Bio/Entrez/DTDs/isoamso.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,906 root INFO copying Bio/Entrez/DTDs/isoamsr.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,907 root INFO copying Bio/Entrez/DTDs/isobox.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,907 root INFO copying Bio/Entrez/DTDs/isocyr1.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,907 root INFO copying Bio/Entrez/DTDs/isocyr2.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,908 root INFO copying Bio/Entrez/DTDs/isodia.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,908 root INFO copying Bio/Entrez/DTDs/isogrk1.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,908 root INFO copying Bio/Entrez/DTDs/isogrk2.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,909 root INFO copying Bio/Entrez/DTDs/isogrk3.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,909 root INFO copying Bio/Entrez/DTDs/isogrk4.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,909 root INFO copying Bio/Entrez/DTDs/isolat1.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,910 root INFO copying Bio/Entrez/DTDs/isolat2.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,910 root INFO copying Bio/Entrez/DTDs/isomfrk.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,910 root INFO copying Bio/Entrez/DTDs/isomopf.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,911 root INFO copying Bio/Entrez/DTDs/isomscr.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,911 root INFO copying Bio/Entrez/DTDs/isonum.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,911 root INFO copying Bio/Entrez/DTDs/isopub.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,912 root INFO copying Bio/Entrez/DTDs/isotech.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,912 root INFO copying Bio/Entrez/DTDs/journalmeta.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,912 root INFO copying Bio/Entrez/DTDs/link.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,913 root INFO copying Bio/Entrez/DTDs/list.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,913 root INFO copying Bio/Entrez/DTDs/math.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,913 root INFO copying Bio/Entrez/DTDs/mathml-in-pubmed.mod -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,914 root INFO copying Bio/Entrez/DTDs/mathml2-qname-1.mod -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,914 root INFO copying Bio/Entrez/DTDs/mathml2.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,914 root INFO copying Bio/Entrez/DTDs/mathml3-qname1.mod -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,915 root INFO copying Bio/Entrez/DTDs/mathml3.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,915 root INFO copying Bio/Entrez/DTDs/mathmlsetup.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,915 root INFO copying Bio/Entrez/DTDs/mmlalias.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,916 root INFO copying Bio/Entrez/DTDs/mmlextra.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,916 root INFO copying Bio/Entrez/DTDs/modules.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,916 root INFO copying Bio/Entrez/DTDs/nlm-articleset-2.0.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,917 root INFO copying Bio/Entrez/DTDs/nlmcatalogrecordset_170601.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,917 root INFO copying Bio/Entrez/DTDs/nlmcommon_011101.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,917 root INFO copying Bio/Entrez/DTDs/nlmcommon_080101.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,918 root INFO copying Bio/Entrez/DTDs/nlmcommon_090101.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,918 root INFO copying Bio/Entrez/DTDs/nlmmedline_011101.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,918 root INFO copying Bio/Entrez/DTDs/nlmmedline_080101.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,919 root INFO copying Bio/Entrez/DTDs/nlmmedline_090101.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,919 root INFO copying Bio/Entrez/DTDs/nlmmedlinecitation_011101.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,920 root INFO copying Bio/Entrez/DTDs/nlmmedlinecitation_080101.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,920 root INFO copying Bio/Entrez/DTDs/nlmmedlinecitation_090101.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,920 root INFO copying Bio/Entrez/DTDs/nlmmedlinecitationset_100101.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,921 root INFO copying Bio/Entrez/DTDs/nlmmedlinecitationset_100301.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,921 root INFO copying Bio/Entrez/DTDs/nlmmedlinecitationset_110101.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,921 root INFO copying Bio/Entrez/DTDs/nlmmedlinecitationset_120101.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,922 root INFO copying Bio/Entrez/DTDs/nlmmedlinecitationset_130101.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,922 root INFO copying Bio/Entrez/DTDs/nlmmedlinecitationset_130501.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,922 root INFO copying Bio/Entrez/DTDs/nlmmedlinecitationset_140101.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,923 root INFO copying Bio/Entrez/DTDs/nlmmedlinecitationset_150101.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,923 root INFO copying Bio/Entrez/DTDs/nlmserials_080101.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,923 root INFO copying Bio/Entrez/DTDs/nlmserials_100101.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,924 root INFO copying Bio/Entrez/DTDs/nlmsharedcatcit_080101.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,924 root INFO copying Bio/Entrez/DTDs/nlmsharedcatcit_090101.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,924 root INFO copying Bio/Entrez/DTDs/notat.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,925 root INFO copying Bio/Entrez/DTDs/para.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,925 root INFO copying Bio/Entrez/DTDs/phrase.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,925 root INFO copying Bio/Entrez/DTDs/pmc-1.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,926 root INFO copying Bio/Entrez/DTDs/pubmed_020114.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,926 root INFO copying Bio/Entrez/DTDs/pubmed_080101.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,926 root INFO copying Bio/Entrez/DTDs/pubmed_090101.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,927 root INFO copying Bio/Entrez/DTDs/pubmed_100101.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,927 root INFO copying Bio/Entrez/DTDs/pubmed_100301.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,927 root INFO copying Bio/Entrez/DTDs/pubmed_110101.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,928 root INFO copying Bio/Entrez/DTDs/pubmed_120101.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,928 root INFO copying Bio/Entrez/DTDs/pubmed_130101.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,928 root INFO copying Bio/Entrez/DTDs/pubmed_130501.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,928 root INFO copying Bio/Entrez/DTDs/pubmed_140101.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,929 root INFO copying Bio/Entrez/DTDs/pubmed_150101.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,929 root INFO copying Bio/Entrez/DTDs/pubmed_180101.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,929 root INFO copying Bio/Entrez/DTDs/pubmed_180601.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,930 root INFO copying Bio/Entrez/DTDs/pubmed_190101.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,930 root INFO copying Bio/Entrez/DTDs/references.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,931 root INFO copying Bio/Entrez/DTDs/section.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,931 root INFO copying Bio/Entrez/DTDs/taxon.dtd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,931 root INFO copying Bio/Entrez/DTDs/xhtml-inlstyle-1.mod -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,932 root INFO copying Bio/Entrez/DTDs/xhtml-table-1.mod -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,932 root INFO copying Bio/Entrez/DTDs/xmlspecchars.ent -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs 2025-11-20 00:44:38,932 root INFO creating build/lib.linux-ppc64le-cpython-312/Bio/Entrez/XSDs 2025-11-20 00:44:38,932 root INFO copying Bio/Entrez/XSDs/IPGReportSet.xsd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/XSDs 2025-11-20 00:44:38,933 root INFO copying Bio/Entrez/XSDs/NCBI_BlastOutput2.mod.xsd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/XSDs 2025-11-20 00:44:38,933 root INFO copying Bio/Entrez/XSDs/NCBI_BlastOutput2.xsd -> build/lib.linux-ppc64le-cpython-312/Bio/Entrez/XSDs 2025-11-20 00:44:38,933 root INFO copying Bio/motifs/_pwm.c -> build/lib.linux-ppc64le-cpython-312/Bio/motifs 2025-11-20 00:44:38,934 root INFO copying Bio/Nexus/cnexus.c -> build/lib.linux-ppc64le-cpython-312/Bio/Nexus 2025-11-20 00:44:38,934 root INFO copying Bio/PDB/bcifhelpermodule.c -> build/lib.linux-ppc64le-cpython-312/Bio/PDB 2025-11-20 00:44:38,934 root INFO copying Bio/PDB/ccealignmodule.c -> build/lib.linux-ppc64le-cpython-312/Bio/PDB 2025-11-20 00:44:38,935 root INFO copying Bio/PDB/kdtrees.c -> build/lib.linux-ppc64le-cpython-312/Bio/PDB 2025-11-20 00:44:38,935 root INFO copying Bio/SeqIO/_twoBitIO.c -> build/lib.linux-ppc64le-cpython-312/Bio/SeqIO 2025-11-20 00:44:38,935 root INFO copying BioSQL/py.typed -> build/lib.linux-ppc64le-cpython-312/BioSQL 2025-11-20 00:44:38,951 root INFO running build_ext 2025-11-20 00:44:38,954 root INFO building 'Bio.Align._codonaligner' extension 2025-11-20 00:44:38,955 root INFO creating build/temp.linux-ppc64le-cpython-312/Bio/Align 2025-11-20 00:44:38,955 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.12 -c Bio/Align/_codonaligner.c -o build/temp.linux-ppc64le-cpython-312/Bio/Align/_codonaligner.o 2025-11-20 00:44:39,470 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Wl,-z,pack-relative-relocs -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-ppc64le-cpython-312/Bio/Align/_codonaligner.o -L/usr/lib -o build/lib.linux-ppc64le-cpython-312/Bio/Align/_codonaligner.cpython-312-powerpc64le-linux-musl.so 2025-11-20 00:44:39,484 root INFO building 'Bio.Align._pairwisealigner' extension 2025-11-20 00:44:39,485 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.12 -c Bio/Align/_pairwisealigner.c -o build/temp.linux-ppc64le-cpython-312/Bio/Align/_pairwisealigner.o 2025-11-20 00:44:47,106 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Wl,-z,pack-relative-relocs -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-ppc64le-cpython-312/Bio/Align/_pairwisealigner.o -L/usr/lib -o build/lib.linux-ppc64le-cpython-312/Bio/Align/_pairwisealigner.cpython-312-powerpc64le-linux-musl.so 2025-11-20 00:44:47,124 root INFO building 'Bio.Align._aligncore' extension 2025-11-20 00:44:47,125 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.12 -c Bio/Align/_aligncore.c -o build/temp.linux-ppc64le-cpython-312/Bio/Align/_aligncore.o 2025-11-20 00:44:47,368 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Wl,-z,pack-relative-relocs -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-ppc64le-cpython-312/Bio/Align/_aligncore.o -L/usr/lib -o build/lib.linux-ppc64le-cpython-312/Bio/Align/_aligncore.cpython-312-powerpc64le-linux-musl.so 2025-11-20 00:44:47,381 root INFO building 'Bio.cpairwise2' extension 2025-11-20 00:44:47,382 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.12 -c Bio/cpairwise2module.c -o build/temp.linux-ppc64le-cpython-312/Bio/cpairwise2module.o 2025-11-20 00:44:47,696 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Wl,-z,pack-relative-relocs -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-ppc64le-cpython-312/Bio/cpairwise2module.o -L/usr/lib -o build/lib.linux-ppc64le-cpython-312/Bio/cpairwise2.cpython-312-powerpc64le-linux-musl.so 2025-11-20 00:44:47,714 root INFO building 'Bio.Nexus.cnexus' extension 2025-11-20 00:44:47,714 root INFO creating build/temp.linux-ppc64le-cpython-312/Bio/Nexus 2025-11-20 00:44:47,715 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.12 -c Bio/Nexus/cnexus.c -o build/temp.linux-ppc64le-cpython-312/Bio/Nexus/cnexus.o 2025-11-20 00:44:47,848 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Wl,-z,pack-relative-relocs -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-ppc64le-cpython-312/Bio/Nexus/cnexus.o -L/usr/lib -o build/lib.linux-ppc64le-cpython-312/Bio/Nexus/cnexus.cpython-312-powerpc64le-linux-musl.so 2025-11-20 00:44:47,863 root INFO building 'Bio.motifs._pwm' extension 2025-11-20 00:44:47,864 root INFO creating build/temp.linux-ppc64le-cpython-312/Bio/motifs 2025-11-20 00:44:47,864 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.12 -c Bio/motifs/_pwm.c -o build/temp.linux-ppc64le-cpython-312/Bio/motifs/_pwm.o 2025-11-20 00:44:48,011 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Wl,-z,pack-relative-relocs -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-ppc64le-cpython-312/Bio/motifs/_pwm.o -L/usr/lib -o build/lib.linux-ppc64le-cpython-312/Bio/motifs/_pwm.cpython-312-powerpc64le-linux-musl.so 2025-11-20 00:44:48,027 root INFO building 'Bio.Cluster._cluster' extension 2025-11-20 00:44:48,028 root INFO creating build/temp.linux-ppc64le-cpython-312/Bio/Cluster 2025-11-20 00:44:48,028 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.12 -c Bio/Cluster/cluster.c -o build/temp.linux-ppc64le-cpython-312/Bio/Cluster/cluster.o -DCLUSTER_USE_PYTHON_MEMORY 2025-11-20 00:44:50,461 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.12 -c Bio/Cluster/clustermodule.c -o build/temp.linux-ppc64le-cpython-312/Bio/Cluster/clustermodule.o -DCLUSTER_USE_PYTHON_MEMORY 2025-11-20 00:44:51,224 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Wl,-z,pack-relative-relocs -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-ppc64le-cpython-312/Bio/Cluster/cluster.o build/temp.linux-ppc64le-cpython-312/Bio/Cluster/clustermodule.o -L/usr/lib -o build/lib.linux-ppc64le-cpython-312/Bio/Cluster/_cluster.cpython-312-powerpc64le-linux-musl.so 2025-11-20 00:44:51,240 root INFO building 'Bio.PDB.ccealign' extension 2025-11-20 00:44:51,241 root INFO creating build/temp.linux-ppc64le-cpython-312/Bio/PDB 2025-11-20 00:44:51,241 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.12 -c Bio/PDB/ccealignmodule.c -o build/temp.linux-ppc64le-cpython-312/Bio/PDB/ccealignmodule.o 2025-11-20 00:44:51,593 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Wl,-z,pack-relative-relocs -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-ppc64le-cpython-312/Bio/PDB/ccealignmodule.o -L/usr/lib -o build/lib.linux-ppc64le-cpython-312/Bio/PDB/ccealign.cpython-312-powerpc64le-linux-musl.so 2025-11-20 00:44:51,605 root INFO building 'Bio.PDB.kdtrees' extension 2025-11-20 00:44:51,606 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.12 -c Bio/PDB/kdtrees.c -o build/temp.linux-ppc64le-cpython-312/Bio/PDB/kdtrees.o 2025-11-20 00:44:52,069 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Wl,-z,pack-relative-relocs -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-ppc64le-cpython-312/Bio/PDB/kdtrees.o -L/usr/lib -o build/lib.linux-ppc64le-cpython-312/Bio/PDB/kdtrees.cpython-312-powerpc64le-linux-musl.so 2025-11-20 00:44:52,085 root INFO building 'Bio.PDB._bcif_helper' extension 2025-11-20 00:44:52,086 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.12 -c Bio/PDB/bcifhelpermodule.c -o build/temp.linux-ppc64le-cpython-312/Bio/PDB/bcifhelpermodule.o 2025-11-20 00:44:52,237 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Wl,-z,pack-relative-relocs -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-ppc64le-cpython-312/Bio/PDB/bcifhelpermodule.o -L/usr/lib -o build/lib.linux-ppc64le-cpython-312/Bio/PDB/_bcif_helper.cpython-312-powerpc64le-linux-musl.so 2025-11-20 00:44:52,254 root INFO building 'Bio.SeqIO._twoBitIO' extension 2025-11-20 00:44:52,254 root INFO creating build/temp.linux-ppc64le-cpython-312/Bio/SeqIO 2025-11-20 00:44:52,255 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.12 -c Bio/SeqIO/_twoBitIO.c -o build/temp.linux-ppc64le-cpython-312/Bio/SeqIO/_twoBitIO.o 2025-11-20 00:44:52,433 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Wl,-z,pack-relative-relocs -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-ppc64le-cpython-312/Bio/SeqIO/_twoBitIO.o -L/usr/lib -o build/lib.linux-ppc64le-cpython-312/Bio/SeqIO/_twoBitIO.cpython-312-powerpc64le-linux-musl.so 2025-11-20 00:44:52,465 root INFO installing to build/bdist.linux-ppc64le/wheel 2025-11-20 00:44:52,465 root INFO running install 2025-11-20 00:44:52,499 root INFO running install_lib 2025-11-20 00:44:52,505 root INFO creating build/bdist.linux-ppc64le/wheel 2025-11-20 00:44:52,505 root INFO creating build/bdist.linux-ppc64le/wheel/BioSQL 2025-11-20 00:44:52,505 root INFO copying build/lib.linux-ppc64le-cpython-312/BioSQL/DBUtils.py -> build/bdist.linux-ppc64le/wheel/./BioSQL 2025-11-20 00:44:52,506 root INFO copying build/lib.linux-ppc64le-cpython-312/BioSQL/BioSeqDatabase.py -> build/bdist.linux-ppc64le/wheel/./BioSQL 2025-11-20 00:44:52,506 root INFO copying build/lib.linux-ppc64le-cpython-312/BioSQL/Loader.py -> build/bdist.linux-ppc64le/wheel/./BioSQL 2025-11-20 00:44:52,506 root INFO copying build/lib.linux-ppc64le-cpython-312/BioSQL/py.typed -> build/bdist.linux-ppc64le/wheel/./BioSQL 2025-11-20 00:44:52,506 root INFO copying build/lib.linux-ppc64le-cpython-312/BioSQL/__init__.py -> build/bdist.linux-ppc64le/wheel/./BioSQL 2025-11-20 00:44:52,507 root INFO copying build/lib.linux-ppc64le-cpython-312/BioSQL/BioSeq.py -> build/bdist.linux-ppc64le/wheel/./BioSQL 2025-11-20 00:44:52,507 root INFO creating build/bdist.linux-ppc64le/wheel/Bio 2025-11-20 00:44:52,507 root INFO creating build/bdist.linux-ppc64le/wheel/Bio/Pathway 2025-11-20 00:44:52,508 root INFO creating build/bdist.linux-ppc64le/wheel/Bio/Pathway/Rep 2025-11-20 00:44:52,508 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Pathway/Rep/MultiGraph.py -> build/bdist.linux-ppc64le/wheel/./Bio/Pathway/Rep 2025-11-20 00:44:52,508 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Pathway/Rep/Graph.py -> build/bdist.linux-ppc64le/wheel/./Bio/Pathway/Rep 2025-11-20 00:44:52,508 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Pathway/Rep/__init__.py -> build/bdist.linux-ppc64le/wheel/./Bio/Pathway/Rep 2025-11-20 00:44:52,509 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Pathway/__init__.py -> build/bdist.linux-ppc64le/wheel/./Bio/Pathway 2025-11-20 00:44:52,509 root INFO creating build/bdist.linux-ppc64le/wheel/Bio/codonalign 2025-11-20 00:44:52,509 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/codonalign/codonseq.py -> build/bdist.linux-ppc64le/wheel/./Bio/codonalign 2025-11-20 00:44:52,509 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/codonalign/codonalignment.py -> build/bdist.linux-ppc64le/wheel/./Bio/codonalign 2025-11-20 00:44:52,510 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/codonalign/__init__.py -> build/bdist.linux-ppc64le/wheel/./Bio/codonalign 2025-11-20 00:44:52,510 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/pairwise2.py -> build/bdist.linux-ppc64le/wheel/./Bio 2025-11-20 00:44:52,510 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/MarkovModel.py -> build/bdist.linux-ppc64le/wheel/./Bio 2025-11-20 00:44:52,510 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/cpairwise2.cpython-312-powerpc64le-linux-musl.so -> build/bdist.linux-ppc64le/wheel/./Bio 2025-11-20 00:44:52,511 root INFO creating build/bdist.linux-ppc64le/wheel/Bio/Nexus 2025-11-20 00:44:52,511 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Nexus/Nexus.py -> build/bdist.linux-ppc64le/wheel/./Bio/Nexus 2025-11-20 00:44:52,511 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Nexus/StandardData.py -> build/bdist.linux-ppc64le/wheel/./Bio/Nexus 2025-11-20 00:44:52,512 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Nexus/cnexus.cpython-312-powerpc64le-linux-musl.so -> build/bdist.linux-ppc64le/wheel/./Bio/Nexus 2025-11-20 00:44:52,512 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Nexus/Trees.py -> build/bdist.linux-ppc64le/wheel/./Bio/Nexus 2025-11-20 00:44:52,512 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Nexus/cnexus.c -> build/bdist.linux-ppc64le/wheel/./Bio/Nexus 2025-11-20 00:44:52,512 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Nexus/__init__.py -> build/bdist.linux-ppc64le/wheel/./Bio/Nexus 2025-11-20 00:44:52,512 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Nexus/Nodes.py -> build/bdist.linux-ppc64le/wheel/./Bio/Nexus 2025-11-20 00:44:52,513 root INFO creating build/bdist.linux-ppc64le/wheel/Bio/phenotype 2025-11-20 00:44:52,513 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/phenotype/pm_fitting.py -> build/bdist.linux-ppc64le/wheel/./Bio/phenotype 2025-11-20 00:44:52,513 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/phenotype/phen_micro.py -> build/bdist.linux-ppc64le/wheel/./Bio/phenotype 2025-11-20 00:44:52,513 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/phenotype/__init__.py -> build/bdist.linux-ppc64le/wheel/./Bio/phenotype 2025-11-20 00:44:52,514 root INFO creating build/bdist.linux-ppc64le/wheel/Bio/Align 2025-11-20 00:44:52,514 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Align/msf.py -> build/bdist.linux-ppc64le/wheel/./Bio/Align 2025-11-20 00:44:52,514 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Align/bigpsl.py -> build/bdist.linux-ppc64le/wheel/./Bio/Align 2025-11-20 00:44:52,515 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Align/_codonaligner.c -> build/bdist.linux-ppc64le/wheel/./Bio/Align 2025-11-20 00:44:52,515 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Align/_pairwisealigner.c -> build/bdist.linux-ppc64le/wheel/./Bio/Align 2025-11-20 00:44:52,515 root INFO creating build/bdist.linux-ppc64le/wheel/Bio/Align/Applications 2025-11-20 00:44:52,516 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Align/Applications/_Prank.py -> build/bdist.linux-ppc64le/wheel/./Bio/Align/Applications 2025-11-20 00:44:52,516 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Align/Applications/_Clustalw.py -> build/bdist.linux-ppc64le/wheel/./Bio/Align/Applications 2025-11-20 00:44:52,516 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Align/Applications/_Probcons.py -> build/bdist.linux-ppc64le/wheel/./Bio/Align/Applications 2025-11-20 00:44:52,516 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Align/Applications/_Muscle.py -> build/bdist.linux-ppc64le/wheel/./Bio/Align/Applications 2025-11-20 00:44:52,516 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Align/Applications/_ClustalOmega.py -> build/bdist.linux-ppc64le/wheel/./Bio/Align/Applications 2025-11-20 00:44:52,517 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Align/Applications/_Dialign.py -> build/bdist.linux-ppc64le/wheel/./Bio/Align/Applications 2025-11-20 00:44:52,517 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Align/Applications/_TCoffee.py -> build/bdist.linux-ppc64le/wheel/./Bio/Align/Applications 2025-11-20 00:44:52,517 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Align/Applications/_Mafft.py -> build/bdist.linux-ppc64le/wheel/./Bio/Align/Applications 2025-11-20 00:44:52,517 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Align/Applications/_MSAProbs.py -> build/bdist.linux-ppc64le/wheel/./Bio/Align/Applications 2025-11-20 00:44:52,518 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Align/Applications/__init__.py -> build/bdist.linux-ppc64le/wheel/./Bio/Align/Applications 2025-11-20 00:44:52,518 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Align/tabular.py -> build/bdist.linux-ppc64le/wheel/./Bio/Align 2025-11-20 00:44:52,518 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Align/psl.py -> build/bdist.linux-ppc64le/wheel/./Bio/Align 2025-11-20 00:44:52,518 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Align/_pairwisealigner.cpython-312-powerpc64le-linux-musl.so -> build/bdist.linux-ppc64le/wheel/./Bio/Align 2025-11-20 00:44:52,519 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Align/chain.py -> build/bdist.linux-ppc64le/wheel/./Bio/Align 2025-11-20 00:44:52,519 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Align/phylip.py -> build/bdist.linux-ppc64le/wheel/./Bio/Align 2025-11-20 00:44:52,519 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Align/maf.py -> build/bdist.linux-ppc64le/wheel/./Bio/Align 2025-11-20 00:44:52,519 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Align/clustal.py -> build/bdist.linux-ppc64le/wheel/./Bio/Align 2025-11-20 00:44:52,520 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Align/mauve.py -> build/bdist.linux-ppc64le/wheel/./Bio/Align 2025-11-20 00:44:52,520 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Align/nexus.py -> build/bdist.linux-ppc64le/wheel/./Bio/Align 2025-11-20 00:44:52,520 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Align/exonerate.py -> build/bdist.linux-ppc64le/wheel/./Bio/Align 2025-11-20 00:44:52,520 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Align/stockholm.py -> build/bdist.linux-ppc64le/wheel/./Bio/Align 2025-11-20 00:44:52,521 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Align/fasta.py -> build/bdist.linux-ppc64le/wheel/./Bio/Align 2025-11-20 00:44:52,521 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Align/analysis.py -> build/bdist.linux-ppc64le/wheel/./Bio/Align 2025-11-20 00:44:52,521 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Align/_aligncore.cpython-312-powerpc64le-linux-musl.so -> build/bdist.linux-ppc64le/wheel/./Bio/Align 2025-11-20 00:44:52,521 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Align/bed.py -> build/bdist.linux-ppc64le/wheel/./Bio/Align 2025-11-20 00:44:52,522 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Align/a2m.py -> build/bdist.linux-ppc64le/wheel/./Bio/Align 2025-11-20 00:44:52,522 root INFO creating build/bdist.linux-ppc64le/wheel/Bio/Align/substitution_matrices 2025-11-20 00:44:52,522 root INFO creating build/bdist.linux-ppc64le/wheel/Bio/Align/substitution_matrices/data 2025-11-20 00:44:52,522 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Align/substitution_matrices/data/RAO -> build/bdist.linux-ppc64le/wheel/./Bio/Align/substitution_matrices/data 2025-11-20 00:44:52,523 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Align/substitution_matrices/data/FENG -> build/bdist.linux-ppc64le/wheel/./Bio/Align/substitution_matrices/data 2025-11-20 00:44:52,523 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Align/substitution_matrices/data/STR -> build/bdist.linux-ppc64le/wheel/./Bio/Align/substitution_matrices/data 2025-11-20 00:44:52,523 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Align/substitution_matrices/data/PAM250 -> build/bdist.linux-ppc64le/wheel/./Bio/Align/substitution_matrices/data 2025-11-20 00:44:52,523 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Align/substitution_matrices/data/MDM78 -> build/bdist.linux-ppc64le/wheel/./Bio/Align/substitution_matrices/data 2025-11-20 00:44:52,524 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Align/substitution_matrices/data/BENNER74 -> build/bdist.linux-ppc64le/wheel/./Bio/Align/substitution_matrices/data 2025-11-20 00:44:52,524 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Align/substitution_matrices/data/JONES -> build/bdist.linux-ppc64le/wheel/./Bio/Align/substitution_matrices/data 2025-11-20 00:44:52,524 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Align/substitution_matrices/data/BLOSUM50 -> build/bdist.linux-ppc64le/wheel/./Bio/Align/substitution_matrices/data 2025-11-20 00:44:52,524 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Align/substitution_matrices/data/JOHNSON -> build/bdist.linux-ppc64le/wheel/./Bio/Align/substitution_matrices/data 2025-11-20 00:44:52,524 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Align/substitution_matrices/data/MCLACHLAN -> build/bdist.linux-ppc64le/wheel/./Bio/Align/substitution_matrices/data 2025-11-20 00:44:52,525 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Align/substitution_matrices/data/BENNER22 -> build/bdist.linux-ppc64le/wheel/./Bio/Align/substitution_matrices/data 2025-11-20 00:44:52,525 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Align/substitution_matrices/data/GENETIC -> build/bdist.linux-ppc64le/wheel/./Bio/Align/substitution_matrices/data 2025-11-20 00:44:52,525 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Align/substitution_matrices/data/BLOSUM90 -> build/bdist.linux-ppc64le/wheel/./Bio/Align/substitution_matrices/data 2025-11-20 00:44:52,525 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Align/substitution_matrices/data/DAYHOFF -> build/bdist.linux-ppc64le/wheel/./Bio/Align/substitution_matrices/data 2025-11-20 00:44:52,526 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Align/substitution_matrices/data/NUC.4.4 -> build/bdist.linux-ppc64le/wheel/./Bio/Align/substitution_matrices/data 2025-11-20 00:44:52,526 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Align/substitution_matrices/data/MEGABLAST -> build/bdist.linux-ppc64le/wheel/./Bio/Align/substitution_matrices/data 2025-11-20 00:44:52,526 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Align/substitution_matrices/data/TRANS -> build/bdist.linux-ppc64le/wheel/./Bio/Align/substitution_matrices/data 2025-11-20 00:44:52,526 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Align/substitution_matrices/data/RISLER -> build/bdist.linux-ppc64le/wheel/./Bio/Align/substitution_matrices/data 2025-11-20 00:44:52,526 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Align/substitution_matrices/data/BLOSUM45 -> build/bdist.linux-ppc64le/wheel/./Bio/Align/substitution_matrices/data 2025-11-20 00:44:52,527 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Align/substitution_matrices/data/BLOSUM62 -> build/bdist.linux-ppc64le/wheel/./Bio/Align/substitution_matrices/data 2025-11-20 00:44:52,527 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Align/substitution_matrices/data/SCHNEIDER -> build/bdist.linux-ppc64le/wheel/./Bio/Align/substitution_matrices/data 2025-11-20 00:44:52,527 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Align/substitution_matrices/data/PAM70 -> build/bdist.linux-ppc64le/wheel/./Bio/Align/substitution_matrices/data 2025-11-20 00:44:52,527 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Align/substitution_matrices/data/BLASTP -> build/bdist.linux-ppc64le/wheel/./Bio/Align/substitution_matrices/data 2025-11-20 00:44:52,528 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Align/substitution_matrices/data/LEVIN -> build/bdist.linux-ppc64le/wheel/./Bio/Align/substitution_matrices/data 2025-11-20 00:44:52,528 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Align/substitution_matrices/data/PAM30 -> build/bdist.linux-ppc64le/wheel/./Bio/Align/substitution_matrices/data 2025-11-20 00:44:52,528 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Align/substitution_matrices/data/HOXD70 -> build/bdist.linux-ppc64le/wheel/./Bio/Align/substitution_matrices/data 2025-11-20 00:44:52,528 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Align/substitution_matrices/data/GONNET1992 -> build/bdist.linux-ppc64le/wheel/./Bio/Align/substitution_matrices/data 2025-11-20 00:44:52,529 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Align/substitution_matrices/data/BENNER6 -> build/bdist.linux-ppc64le/wheel/./Bio/Align/substitution_matrices/data 2025-11-20 00:44:52,529 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Align/substitution_matrices/data/BLOSUM80 -> build/bdist.linux-ppc64le/wheel/./Bio/Align/substitution_matrices/data 2025-11-20 00:44:52,529 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Align/substitution_matrices/data/BLASTN -> build/bdist.linux-ppc64le/wheel/./Bio/Align/substitution_matrices/data 2025-11-20 00:44:52,529 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Align/substitution_matrices/__init__.py -> build/bdist.linux-ppc64le/wheel/./Bio/Align/substitution_matrices 2025-11-20 00:44:52,530 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Align/_codonaligner.cpython-312-powerpc64le-linux-musl.so -> build/bdist.linux-ppc64le/wheel/./Bio/Align 2025-11-20 00:44:52,530 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Align/AlignInfo.py -> build/bdist.linux-ppc64le/wheel/./Bio/Align 2025-11-20 00:44:52,530 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Align/sam.py -> build/bdist.linux-ppc64le/wheel/./Bio/Align 2025-11-20 00:44:52,530 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Align/hhr.py -> build/bdist.linux-ppc64le/wheel/./Bio/Align 2025-11-20 00:44:52,530 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Align/_aligncore.c -> build/bdist.linux-ppc64le/wheel/./Bio/Align 2025-11-20 00:44:52,531 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Align/bigbed.py -> build/bdist.linux-ppc64le/wheel/./Bio/Align 2025-11-20 00:44:52,531 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Align/bigmaf.py -> build/bdist.linux-ppc64le/wheel/./Bio/Align 2025-11-20 00:44:52,531 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Align/__init__.py -> build/bdist.linux-ppc64le/wheel/./Bio/Align 2025-11-20 00:44:52,532 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Align/emboss.py -> build/bdist.linux-ppc64le/wheel/./Bio/Align 2025-11-20 00:44:52,532 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Align/interfaces.py -> build/bdist.linux-ppc64le/wheel/./Bio/Align 2025-11-20 00:44:52,532 root INFO creating build/bdist.linux-ppc64le/wheel/Bio/SearchIO 2025-11-20 00:44:52,532 root INFO creating build/bdist.linux-ppc64le/wheel/Bio/SearchIO/HmmerIO 2025-11-20 00:44:52,533 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/SearchIO/HmmerIO/hmmer3_domtab.py -> build/bdist.linux-ppc64le/wheel/./Bio/SearchIO/HmmerIO 2025-11-20 00:44:52,533 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/SearchIO/HmmerIO/_base.py -> build/bdist.linux-ppc64le/wheel/./Bio/SearchIO/HmmerIO 2025-11-20 00:44:52,533 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/SearchIO/HmmerIO/hmmer3_tab.py -> build/bdist.linux-ppc64le/wheel/./Bio/SearchIO/HmmerIO 2025-11-20 00:44:52,533 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/SearchIO/HmmerIO/hmmer2_text.py -> build/bdist.linux-ppc64le/wheel/./Bio/SearchIO/HmmerIO 2025-11-20 00:44:52,534 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/SearchIO/HmmerIO/__init__.py -> build/bdist.linux-ppc64le/wheel/./Bio/SearchIO/HmmerIO 2025-11-20 00:44:52,534 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/SearchIO/HmmerIO/hmmer3_text.py -> build/bdist.linux-ppc64le/wheel/./Bio/SearchIO/HmmerIO 2025-11-20 00:44:52,534 root INFO creating build/bdist.linux-ppc64le/wheel/Bio/SearchIO/HHsuiteIO 2025-11-20 00:44:52,534 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/SearchIO/HHsuiteIO/hhsuite2_text.py -> build/bdist.linux-ppc64le/wheel/./Bio/SearchIO/HHsuiteIO 2025-11-20 00:44:52,535 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/SearchIO/HHsuiteIO/__init__.py -> build/bdist.linux-ppc64le/wheel/./Bio/SearchIO/HHsuiteIO 2025-11-20 00:44:52,535 root INFO creating build/bdist.linux-ppc64le/wheel/Bio/SearchIO/InterproscanIO 2025-11-20 00:44:52,535 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/SearchIO/InterproscanIO/interproscan_xml.py -> build/bdist.linux-ppc64le/wheel/./Bio/SearchIO/InterproscanIO 2025-11-20 00:44:52,535 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/SearchIO/InterproscanIO/__init__.py -> build/bdist.linux-ppc64le/wheel/./Bio/SearchIO/InterproscanIO 2025-11-20 00:44:52,536 root INFO creating build/bdist.linux-ppc64le/wheel/Bio/SearchIO/_model 2025-11-20 00:44:52,536 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/SearchIO/_model/hsp.py -> build/bdist.linux-ppc64le/wheel/./Bio/SearchIO/_model 2025-11-20 00:44:52,536 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/SearchIO/_model/_base.py -> build/bdist.linux-ppc64le/wheel/./Bio/SearchIO/_model 2025-11-20 00:44:52,536 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/SearchIO/_model/hit.py -> build/bdist.linux-ppc64le/wheel/./Bio/SearchIO/_model 2025-11-20 00:44:52,537 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/SearchIO/_model/query.py -> build/bdist.linux-ppc64le/wheel/./Bio/SearchIO/_model 2025-11-20 00:44:52,537 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/SearchIO/_model/__init__.py -> build/bdist.linux-ppc64le/wheel/./Bio/SearchIO/_model 2025-11-20 00:44:52,537 root INFO creating build/bdist.linux-ppc64le/wheel/Bio/SearchIO/BlastIO 2025-11-20 00:44:52,537 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/SearchIO/BlastIO/blast_tab.py -> build/bdist.linux-ppc64le/wheel/./Bio/SearchIO/BlastIO 2025-11-20 00:44:52,538 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/SearchIO/BlastIO/blast_xml.py -> build/bdist.linux-ppc64le/wheel/./Bio/SearchIO/BlastIO 2025-11-20 00:44:52,538 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/SearchIO/BlastIO/__init__.py -> build/bdist.linux-ppc64le/wheel/./Bio/SearchIO/BlastIO 2025-11-20 00:44:52,538 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/SearchIO/_index.py -> build/bdist.linux-ppc64le/wheel/./Bio/SearchIO 2025-11-20 00:44:52,538 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/SearchIO/FastaIO.py -> build/bdist.linux-ppc64le/wheel/./Bio/SearchIO 2025-11-20 00:44:52,539 root INFO creating build/bdist.linux-ppc64le/wheel/Bio/SearchIO/ExonerateIO 2025-11-20 00:44:52,539 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/SearchIO/ExonerateIO/_base.py -> build/bdist.linux-ppc64le/wheel/./Bio/SearchIO/ExonerateIO 2025-11-20 00:44:52,539 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/SearchIO/ExonerateIO/exonerate_text.py -> build/bdist.linux-ppc64le/wheel/./Bio/SearchIO/ExonerateIO 2025-11-20 00:44:52,539 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/SearchIO/ExonerateIO/__init__.py -> build/bdist.linux-ppc64le/wheel/./Bio/SearchIO/ExonerateIO 2025-11-20 00:44:52,540 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/SearchIO/ExonerateIO/exonerate_vulgar.py -> build/bdist.linux-ppc64le/wheel/./Bio/SearchIO/ExonerateIO 2025-11-20 00:44:52,540 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/SearchIO/ExonerateIO/exonerate_cigar.py -> build/bdist.linux-ppc64le/wheel/./Bio/SearchIO/ExonerateIO 2025-11-20 00:44:52,540 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/SearchIO/__init__.py -> build/bdist.linux-ppc64le/wheel/./Bio/SearchIO 2025-11-20 00:44:52,540 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/SearchIO/BlatIO.py -> build/bdist.linux-ppc64le/wheel/./Bio/SearchIO 2025-11-20 00:44:52,541 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/SearchIO/_utils.py -> build/bdist.linux-ppc64le/wheel/./Bio/SearchIO 2025-11-20 00:44:52,541 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/bgzf.py -> build/bdist.linux-ppc64le/wheel/./Bio 2025-11-20 00:44:52,541 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/MaxEntropy.py -> build/bdist.linux-ppc64le/wheel/./Bio 2025-11-20 00:44:52,541 root INFO creating build/bdist.linux-ppc64le/wheel/Bio/UniProt 2025-11-20 00:44:52,542 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/UniProt/GOA.py -> build/bdist.linux-ppc64le/wheel/./Bio/UniProt 2025-11-20 00:44:52,542 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/UniProt/__init__.py -> build/bdist.linux-ppc64le/wheel/./Bio/UniProt 2025-11-20 00:44:52,542 root INFO creating build/bdist.linux-ppc64le/wheel/Bio/Compass 2025-11-20 00:44:52,542 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Compass/__init__.py -> build/bdist.linux-ppc64le/wheel/./Bio/Compass 2025-11-20 00:44:52,543 root INFO creating build/bdist.linux-ppc64le/wheel/Bio/ExPASy 2025-11-20 00:44:52,543 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/ExPASy/Prodoc.py -> build/bdist.linux-ppc64le/wheel/./Bio/ExPASy 2025-11-20 00:44:52,543 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/ExPASy/Enzyme.py -> build/bdist.linux-ppc64le/wheel/./Bio/ExPASy 2025-11-20 00:44:52,543 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/ExPASy/ScanProsite.py -> build/bdist.linux-ppc64le/wheel/./Bio/ExPASy 2025-11-20 00:44:52,544 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/ExPASy/cellosaurus.py -> build/bdist.linux-ppc64le/wheel/./Bio/ExPASy 2025-11-20 00:44:52,544 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/ExPASy/Prosite.py -> build/bdist.linux-ppc64le/wheel/./Bio/ExPASy 2025-11-20 00:44:52,544 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/ExPASy/__init__.py -> build/bdist.linux-ppc64le/wheel/./Bio/ExPASy 2025-11-20 00:44:52,544 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/NaiveBayes.py -> build/bdist.linux-ppc64le/wheel/./Bio 2025-11-20 00:44:52,545 root INFO creating build/bdist.linux-ppc64le/wheel/Bio/Emboss 2025-11-20 00:44:52,545 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Emboss/Primer3.py -> build/bdist.linux-ppc64le/wheel/./Bio/Emboss 2025-11-20 00:44:52,545 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Emboss/PrimerSearch.py -> build/bdist.linux-ppc64le/wheel/./Bio/Emboss 2025-11-20 00:44:52,545 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Emboss/Applications.py -> build/bdist.linux-ppc64le/wheel/./Bio/Emboss 2025-11-20 00:44:52,546 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Emboss/__init__.py -> build/bdist.linux-ppc64le/wheel/./Bio/Emboss 2025-11-20 00:44:52,546 root INFO creating build/bdist.linux-ppc64le/wheel/Bio/motifs 2025-11-20 00:44:52,546 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/motifs/pfm.py -> build/bdist.linux-ppc64le/wheel/./Bio/motifs 2025-11-20 00:44:52,546 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/motifs/_pwm.c -> build/bdist.linux-ppc64le/wheel/./Bio/motifs 2025-11-20 00:44:52,547 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/motifs/alignace.py -> build/bdist.linux-ppc64le/wheel/./Bio/motifs 2025-11-20 00:44:52,547 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/motifs/mast.py -> build/bdist.linux-ppc64le/wheel/./Bio/motifs 2025-11-20 00:44:52,547 root INFO creating build/bdist.linux-ppc64le/wheel/Bio/motifs/jaspar 2025-11-20 00:44:52,547 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/motifs/jaspar/db.py -> build/bdist.linux-ppc64le/wheel/./Bio/motifs/jaspar 2025-11-20 00:44:52,548 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/motifs/jaspar/__init__.py -> build/bdist.linux-ppc64le/wheel/./Bio/motifs/jaspar 2025-11-20 00:44:52,548 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/motifs/clusterbuster.py -> build/bdist.linux-ppc64le/wheel/./Bio/motifs 2025-11-20 00:44:52,548 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/motifs/thresholds.py -> build/bdist.linux-ppc64le/wheel/./Bio/motifs 2025-11-20 00:44:52,548 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/motifs/transfac.py -> build/bdist.linux-ppc64le/wheel/./Bio/motifs 2025-11-20 00:44:52,548 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/motifs/_pwm.cpython-312-powerpc64le-linux-musl.so -> build/bdist.linux-ppc64le/wheel/./Bio/motifs 2025-11-20 00:44:52,549 root INFO creating build/bdist.linux-ppc64le/wheel/Bio/motifs/applications 2025-11-20 00:44:52,549 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/motifs/applications/_xxmotif.py -> build/bdist.linux-ppc64le/wheel/./Bio/motifs/applications 2025-11-20 00:44:52,549 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/motifs/applications/__init__.py -> build/bdist.linux-ppc64le/wheel/./Bio/motifs/applications 2025-11-20 00:44:52,550 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/motifs/meme.py -> build/bdist.linux-ppc64le/wheel/./Bio/motifs 2025-11-20 00:44:52,550 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/motifs/xms.py -> build/bdist.linux-ppc64le/wheel/./Bio/motifs 2025-11-20 00:44:52,550 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/motifs/__init__.py -> build/bdist.linux-ppc64le/wheel/./Bio/motifs 2025-11-20 00:44:52,550 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/motifs/matrix.py -> build/bdist.linux-ppc64le/wheel/./Bio/motifs 2025-11-20 00:44:52,550 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/motifs/minimal.py -> build/bdist.linux-ppc64le/wheel/./Bio/motifs 2025-11-20 00:44:52,551 root INFO creating build/bdist.linux-ppc64le/wheel/Bio/Medline 2025-11-20 00:44:52,551 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Medline/__init__.py -> build/bdist.linux-ppc64le/wheel/./Bio/Medline 2025-11-20 00:44:52,551 root INFO creating build/bdist.linux-ppc64le/wheel/Bio/Application 2025-11-20 00:44:52,552 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Application/__init__.py -> build/bdist.linux-ppc64le/wheel/./Bio/Application 2025-11-20 00:44:52,552 root INFO creating build/bdist.linux-ppc64le/wheel/Bio/Geo 2025-11-20 00:44:52,552 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Geo/__init__.py -> build/bdist.linux-ppc64le/wheel/./Bio/Geo 2025-11-20 00:44:52,552 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Geo/Record.py -> build/bdist.linux-ppc64le/wheel/./Bio/Geo 2025-11-20 00:44:52,553 root INFO creating build/bdist.linux-ppc64le/wheel/Bio/HMM 2025-11-20 00:44:52,553 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/HMM/MarkovModel.py -> build/bdist.linux-ppc64le/wheel/./Bio/HMM 2025-11-20 00:44:52,553 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/HMM/Utilities.py -> build/bdist.linux-ppc64le/wheel/./Bio/HMM 2025-11-20 00:44:52,553 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/HMM/DynamicProgramming.py -> build/bdist.linux-ppc64le/wheel/./Bio/HMM 2025-11-20 00:44:52,554 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/HMM/Trainer.py -> build/bdist.linux-ppc64le/wheel/./Bio/HMM 2025-11-20 00:44:52,554 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/HMM/__init__.py -> build/bdist.linux-ppc64le/wheel/./Bio/HMM 2025-11-20 00:44:52,554 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/kNN.py -> build/bdist.linux-ppc64le/wheel/./Bio 2025-11-20 00:44:52,554 root INFO creating build/bdist.linux-ppc64le/wheel/Bio/GenBank 2025-11-20 00:44:52,555 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/GenBank/utils.py -> build/bdist.linux-ppc64le/wheel/./Bio/GenBank 2025-11-20 00:44:52,555 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/GenBank/__init__.py -> build/bdist.linux-ppc64le/wheel/./Bio/GenBank 2025-11-20 00:44:52,555 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/GenBank/Scanner.py -> build/bdist.linux-ppc64le/wheel/./Bio/GenBank 2025-11-20 00:44:52,555 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/GenBank/Record.py -> build/bdist.linux-ppc64le/wheel/./Bio/GenBank 2025-11-20 00:44:52,556 root INFO creating build/bdist.linux-ppc64le/wheel/Bio/AlignIO 2025-11-20 00:44:52,556 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/AlignIO/NexusIO.py -> build/bdist.linux-ppc64le/wheel/./Bio/AlignIO 2025-11-20 00:44:52,556 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/AlignIO/FastaIO.py -> build/bdist.linux-ppc64le/wheel/./Bio/AlignIO 2025-11-20 00:44:52,556 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/AlignIO/PhylipIO.py -> build/bdist.linux-ppc64le/wheel/./Bio/AlignIO 2025-11-20 00:44:52,557 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/AlignIO/EmbossIO.py -> build/bdist.linux-ppc64le/wheel/./Bio/AlignIO 2025-11-20 00:44:52,557 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/AlignIO/StockholmIO.py -> build/bdist.linux-ppc64le/wheel/./Bio/AlignIO 2025-11-20 00:44:52,557 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/AlignIO/MsfIO.py -> build/bdist.linux-ppc64le/wheel/./Bio/AlignIO 2025-11-20 00:44:52,557 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/AlignIO/ClustalIO.py -> build/bdist.linux-ppc64le/wheel/./Bio/AlignIO 2025-11-20 00:44:52,557 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/AlignIO/__init__.py -> build/bdist.linux-ppc64le/wheel/./Bio/AlignIO 2025-11-20 00:44:52,558 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/AlignIO/Interfaces.py -> build/bdist.linux-ppc64le/wheel/./Bio/AlignIO 2025-11-20 00:44:52,558 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/AlignIO/MafIO.py -> build/bdist.linux-ppc64le/wheel/./Bio/AlignIO 2025-11-20 00:44:52,558 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/AlignIO/MauveIO.py -> build/bdist.linux-ppc64le/wheel/./Bio/AlignIO 2025-11-20 00:44:52,559 root INFO creating build/bdist.linux-ppc64le/wheel/Bio/SCOP 2025-11-20 00:44:52,559 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/SCOP/Dom.py -> build/bdist.linux-ppc64le/wheel/./Bio/SCOP 2025-11-20 00:44:52,559 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/SCOP/Residues.py -> build/bdist.linux-ppc64le/wheel/./Bio/SCOP 2025-11-20 00:44:52,559 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/SCOP/Hie.py -> build/bdist.linux-ppc64le/wheel/./Bio/SCOP 2025-11-20 00:44:52,559 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/SCOP/Cla.py -> build/bdist.linux-ppc64le/wheel/./Bio/SCOP 2025-11-20 00:44:52,560 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/SCOP/Raf.py -> build/bdist.linux-ppc64le/wheel/./Bio/SCOP 2025-11-20 00:44:52,560 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/SCOP/Des.py -> build/bdist.linux-ppc64le/wheel/./Bio/SCOP 2025-11-20 00:44:52,560 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/SCOP/__init__.py -> build/bdist.linux-ppc64le/wheel/./Bio/SCOP 2025-11-20 00:44:52,560 root INFO creating build/bdist.linux-ppc64le/wheel/Bio/Blast 2025-11-20 00:44:52,561 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Blast/_parser.py -> build/bdist.linux-ppc64le/wheel/./Bio/Blast 2025-11-20 00:44:52,561 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Blast/NCBIXML.py -> build/bdist.linux-ppc64le/wheel/./Bio/Blast 2025-11-20 00:44:52,561 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Blast/Applications.py -> build/bdist.linux-ppc64le/wheel/./Bio/Blast 2025-11-20 00:44:52,561 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Blast/_writers.py -> build/bdist.linux-ppc64le/wheel/./Bio/Blast 2025-11-20 00:44:52,562 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Blast/__init__.py -> build/bdist.linux-ppc64le/wheel/./Bio/Blast 2025-11-20 00:44:52,562 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Blast/NCBIWWW.py -> build/bdist.linux-ppc64le/wheel/./Bio/Blast 2025-11-20 00:44:52,562 root INFO creating build/bdist.linux-ppc64le/wheel/Bio/Cluster 2025-11-20 00:44:52,563 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Cluster/cluster.h -> build/bdist.linux-ppc64le/wheel/./Bio/Cluster 2025-11-20 00:44:52,563 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Cluster/clustermodule.c -> build/bdist.linux-ppc64le/wheel/./Bio/Cluster 2025-11-20 00:44:52,563 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Cluster/_cluster.cpython-312-powerpc64le-linux-musl.so -> build/bdist.linux-ppc64le/wheel/./Bio/Cluster 2025-11-20 00:44:52,563 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Cluster/cluster.c -> build/bdist.linux-ppc64le/wheel/./Bio/Cluster 2025-11-20 00:44:52,564 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Cluster/__init__.py -> build/bdist.linux-ppc64le/wheel/./Bio/Cluster 2025-11-20 00:44:52,564 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/File.py -> build/bdist.linux-ppc64le/wheel/./Bio 2025-11-20 00:44:52,564 root INFO creating build/bdist.linux-ppc64le/wheel/Bio/PDB 2025-11-20 00:44:52,565 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/PDB/Entity.py -> build/bdist.linux-ppc64le/wheel/./Bio/PDB 2025-11-20 00:44:52,565 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/PDB/Dice.py -> build/bdist.linux-ppc64le/wheel/./Bio/PDB 2025-11-20 00:44:52,565 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/PDB/DSSP.py -> build/bdist.linux-ppc64le/wheel/./Bio/PDB 2025-11-20 00:44:52,565 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/PDB/AbstractPropertyMap.py -> build/bdist.linux-ppc64le/wheel/./Bio/PDB 2025-11-20 00:44:52,566 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/PDB/Selection.py -> build/bdist.linux-ppc64le/wheel/./Bio/PDB 2025-11-20 00:44:52,566 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/PDB/ccealign.cpython-312-powerpc64le-linux-musl.so -> build/bdist.linux-ppc64le/wheel/./Bio/PDB 2025-11-20 00:44:52,566 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/PDB/MMCIF2Dict.py -> build/bdist.linux-ppc64le/wheel/./Bio/PDB 2025-11-20 00:44:52,566 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/PDB/vectors.py -> build/bdist.linux-ppc64le/wheel/./Bio/PDB 2025-11-20 00:44:52,566 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/PDB/PICIO.py -> build/bdist.linux-ppc64le/wheel/./Bio/PDB 2025-11-20 00:44:52,567 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/PDB/PSEA.py -> build/bdist.linux-ppc64le/wheel/./Bio/PDB 2025-11-20 00:44:52,567 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/PDB/Structure.py -> build/bdist.linux-ppc64le/wheel/./Bio/PDB 2025-11-20 00:44:52,567 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/PDB/internal_coords.py -> build/bdist.linux-ppc64le/wheel/./Bio/PDB 2025-11-20 00:44:52,568 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/PDB/qcprot.py -> build/bdist.linux-ppc64le/wheel/./Bio/PDB 2025-11-20 00:44:52,568 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/PDB/NACCESS.py -> build/bdist.linux-ppc64le/wheel/./Bio/PDB 2025-11-20 00:44:52,568 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/PDB/ccealignmodule.c -> build/bdist.linux-ppc64le/wheel/./Bio/PDB 2025-11-20 00:44:52,568 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/PDB/Model.py -> build/bdist.linux-ppc64le/wheel/./Bio/PDB 2025-11-20 00:44:52,568 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/PDB/Polypeptide.py -> build/bdist.linux-ppc64le/wheel/./Bio/PDB 2025-11-20 00:44:52,569 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/PDB/StructureAlignment.py -> build/bdist.linux-ppc64le/wheel/./Bio/PDB 2025-11-20 00:44:52,569 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/PDB/cealign.py -> build/bdist.linux-ppc64le/wheel/./Bio/PDB 2025-11-20 00:44:52,569 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/PDB/ic_data.py -> build/bdist.linux-ppc64le/wheel/./Bio/PDB 2025-11-20 00:44:52,570 root INFO creating build/bdist.linux-ppc64le/wheel/Bio/PDB/mmtf 2025-11-20 00:44:52,570 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/PDB/mmtf/mmtfio.py -> build/bdist.linux-ppc64le/wheel/./Bio/PDB/mmtf 2025-11-20 00:44:52,570 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/PDB/mmtf/__init__.py -> build/bdist.linux-ppc64le/wheel/./Bio/PDB/mmtf 2025-11-20 00:44:52,570 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/PDB/mmtf/DefaultParser.py -> build/bdist.linux-ppc64le/wheel/./Bio/PDB/mmtf 2025-11-20 00:44:52,570 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/PDB/PDBMLParser.py -> build/bdist.linux-ppc64le/wheel/./Bio/PDB 2025-11-20 00:44:52,571 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/PDB/Residue.py -> build/bdist.linux-ppc64le/wheel/./Bio/PDB 2025-11-20 00:44:52,571 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/PDB/PDBParser.py -> build/bdist.linux-ppc64le/wheel/./Bio/PDB 2025-11-20 00:44:52,571 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/PDB/_bcif_helper.cpython-312-powerpc64le-linux-musl.so -> build/bdist.linux-ppc64le/wheel/./Bio/PDB 2025-11-20 00:44:52,571 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/PDB/bcifhelpermodule.c -> build/bdist.linux-ppc64le/wheel/./Bio/PDB 2025-11-20 00:44:52,572 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/PDB/MMCIFParser.py -> build/bdist.linux-ppc64le/wheel/./Bio/PDB 2025-11-20 00:44:52,572 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/PDB/mmcifio.py -> build/bdist.linux-ppc64le/wheel/./Bio/PDB 2025-11-20 00:44:52,572 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/PDB/Superimposer.py -> build/bdist.linux-ppc64le/wheel/./Bio/PDB 2025-11-20 00:44:52,572 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/PDB/PDBIO.py -> build/bdist.linux-ppc64le/wheel/./Bio/PDB 2025-11-20 00:44:52,573 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/PDB/NeighborSearch.py -> build/bdist.linux-ppc64le/wheel/./Bio/PDB 2025-11-20 00:44:52,573 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/PDB/PDBList.py -> build/bdist.linux-ppc64le/wheel/./Bio/PDB 2025-11-20 00:44:52,573 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/PDB/SCADIO.py -> build/bdist.linux-ppc64le/wheel/./Bio/PDB 2025-11-20 00:44:52,573 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/PDB/kdtrees.c -> build/bdist.linux-ppc64le/wheel/./Bio/PDB 2025-11-20 00:44:52,573 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/PDB/Atom.py -> build/bdist.linux-ppc64le/wheel/./Bio/PDB 2025-11-20 00:44:52,574 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/PDB/StructureBuilder.py -> build/bdist.linux-ppc64le/wheel/./Bio/PDB 2025-11-20 00:44:52,574 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/PDB/Chain.py -> build/bdist.linux-ppc64le/wheel/./Bio/PDB 2025-11-20 00:44:52,574 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/PDB/alphafold_db.py -> build/bdist.linux-ppc64le/wheel/./Bio/PDB 2025-11-20 00:44:52,574 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/PDB/PDBExceptions.py -> build/bdist.linux-ppc64le/wheel/./Bio/PDB 2025-11-20 00:44:52,575 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/PDB/kdtrees.cpython-312-powerpc64le-linux-musl.so -> build/bdist.linux-ppc64le/wheel/./Bio/PDB 2025-11-20 00:44:52,575 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/PDB/SASA.py -> build/bdist.linux-ppc64le/wheel/./Bio/PDB 2025-11-20 00:44:52,575 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/PDB/ic_rebuild.py -> build/bdist.linux-ppc64le/wheel/./Bio/PDB 2025-11-20 00:44:52,575 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/PDB/__init__.py -> build/bdist.linux-ppc64le/wheel/./Bio/PDB 2025-11-20 00:44:52,576 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/PDB/FragmentMapper.py -> build/bdist.linux-ppc64le/wheel/./Bio/PDB 2025-11-20 00:44:52,576 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/PDB/HSExposure.py -> build/bdist.linux-ppc64le/wheel/./Bio/PDB 2025-11-20 00:44:52,576 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/PDB/ResidueDepth.py -> build/bdist.linux-ppc64le/wheel/./Bio/PDB 2025-11-20 00:44:52,576 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/PDB/parse_pdb_header.py -> build/bdist.linux-ppc64le/wheel/./Bio/PDB 2025-11-20 00:44:52,576 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/PDB/binary_cif.py -> build/bdist.linux-ppc64le/wheel/./Bio/PDB 2025-11-20 00:44:52,577 root INFO creating build/bdist.linux-ppc64le/wheel/Bio/Alphabet 2025-11-20 00:44:52,577 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Alphabet/__init__.py -> build/bdist.linux-ppc64le/wheel/./Bio/Alphabet 2025-11-20 00:44:52,577 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/SeqFeature.py -> build/bdist.linux-ppc64le/wheel/./Bio 2025-11-20 00:44:52,578 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/LogisticRegression.py -> build/bdist.linux-ppc64le/wheel/./Bio 2025-11-20 00:44:52,578 root INFO creating build/bdist.linux-ppc64le/wheel/Bio/NMR 2025-11-20 00:44:52,578 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/NMR/NOEtools.py -> build/bdist.linux-ppc64le/wheel/./Bio/NMR 2025-11-20 00:44:52,578 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/NMR/xpktools.py -> build/bdist.linux-ppc64le/wheel/./Bio/NMR 2025-11-20 00:44:52,579 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/NMR/__init__.py -> build/bdist.linux-ppc64le/wheel/./Bio/NMR 2025-11-20 00:44:52,579 root INFO creating build/bdist.linux-ppc64le/wheel/Bio/Entrez 2025-11-20 00:44:52,580 root INFO creating build/bdist.linux-ppc64le/wheel/Bio/Entrez/DTDs 2025-11-20 00:44:52,580 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/pubmed_110101.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,580 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/nlmmedlinecitationset_120101.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,580 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/Docsum_3_0.mod.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,580 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/Docsum_3_1.mod.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,581 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/isoamsn.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,581 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/pubmed_180101.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,581 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_ID2Access.mod.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,581 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/isoamsr.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,582 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_BioSource.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,582 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/JATS-notat1-3.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,582 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_BioSource.mod.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,582 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/epost.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,583 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/isotech.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,583 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_Entrezgene.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,583 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/eLink_101123.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,583 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_Sequence.mod.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,583 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/XHTMLtablesetup.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,584 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/pubmed_120101.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,584 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/JATS-list1-3.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,584 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/bookdoc_130101.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,584 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_SeqTable.mod.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,585 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/egquery.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,585 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_all.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,585 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/BITS-question-answer2.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,585 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/JATS-journalmeta1-3.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,586 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_General.mod.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,586 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/mathml3.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,586 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_BlastOutput.mod.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,586 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/archivecustom-models.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,586 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/archivecustom-modules.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,587 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_Variation.mod.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,587 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/JATS-archivecustom-models1-3.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,587 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/JATS-phrase1-3.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,587 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/nlmmedlinecitationset_140101.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,588 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_Mim.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,588 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/isoamsc.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,588 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/MMDB.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,588 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/JATS-archivearticle1-3-mathml3.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,589 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/mathml-in-pubmed.mod -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,589 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/nlmsharedcatcit_090101.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,589 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_Seqalign.mod.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,589 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_MedArchive.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,590 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_ID2Access.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,590 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/isobox.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,590 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/nlmsharedcatcit_080101.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,590 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/common.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,591 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_Seqset.mod.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,591 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/JATS-archivecustom-modules1-3.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,591 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/Docsum_3_4.mod.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,591 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/nlmmedline_011101.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,592 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/PDB_General.mod.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,592 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/isocyr2.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,592 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/JATS-ali-namespace1-3.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,592 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/notat.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,592 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_MedArchive.mod.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,593 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/pubmed_130101.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,593 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/JATS-display1-3.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,593 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/JATS-mathml3-mathmlsetup1-3.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,593 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/pmc-1.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,594 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_Pub.mod.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,594 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/INSD_INSDSeq.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,594 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/isonum.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,594 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_PCAssay.mod.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,595 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/HomoloGene.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,595 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/JATS-modules1-3.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,595 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_Seqfeat.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,595 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/math.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,596 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/archivecustom-mixes.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,596 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/nlmmedlinecitationset_150101.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,596 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/archivecustom-classes.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,596 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/SP_General.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,597 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/nlmserials_080101.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,597 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/bookdoc_110101.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,597 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_Project.mod.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,597 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_Seqres.mod.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,598 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/references.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,598 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_Rsite.mod.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,598 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/GenBank_General.mod.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,598 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/JATS-mathml3-modules1-3.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,598 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/BITS-embedded-index2.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,599 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/pubmed_100101.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,599 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_Medline.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,599 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/PDB_General.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,599 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/taxon.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,600 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/Docsum_3_2.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,600 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_SeqTable.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,600 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_Medlars.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,600 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_Medlars.mod.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,601 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/nlmcommon_080101.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,601 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/xhtml-table-1.mod -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,601 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_Medline.mod.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,601 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/nlmmedlinecitation_011101.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,602 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_Entrez2.mod.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,602 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/JATS-chars1-3.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,602 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/SP_General.mod.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,602 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/eSummary_041029.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,603 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/JATS-default-mixes1-3.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,603 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_Gene.mod.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,603 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/JATS-backmatter1-3.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,603 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_Remap.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,603 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/pubmed_020114.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,604 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_Gene.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,604 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/JATS-related-object1-3.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,604 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NSE.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,604 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_Seqres.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,605 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/JATS-nlmcitation1-3.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,605 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/nlmmedlinecitationset_130101.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,605 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_Mime.mod.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,605 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/JATS-para1-3.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,606 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_Seqloc.mod.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,606 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_Protein.mod.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,606 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_RNA.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,606 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/eSpell.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,607 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/isomopf.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,607 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_Access.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,607 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_SeqCode.mod.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,607 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/display.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,608 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_PCSubstance.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,608 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/default-mixes.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,608 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/isogrk3.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,608 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_PubMed.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,608 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/JATS-format1-3.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,609 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/articlemeta.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,609 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_Seqloc.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,609 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_Entrez2.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,610 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/isodia.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,610 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/elink.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,610 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/nlmmedlinecitationset_110101.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,610 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/MMDB_Features.mod.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,611 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_Seqset.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,611 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_BlastDL.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,611 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/JATS-math1-3.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,611 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_Cdd.mod.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,611 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/backmatter.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,612 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/nlmcatalogrecordset_170601.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,612 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/PRF_General.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,612 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/section.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,612 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/nlmmedlinecitationset_130501.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,613 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/JATS-xmlspecchars1-3.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,613 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/INSD_INSDSeq.mod.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,613 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/MMDB_Chemical_graph.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,613 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/MMDB.mod.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,614 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_Seqalign.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,614 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/JATS-archivecustom-classes1-3.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,614 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/JATS-default-classes1-3.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,614 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_Blast4.mod.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,615 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/GenBank_General.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,615 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/default-classes.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,615 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_TxInit.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,615 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/isoamsa.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,616 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/nlmmedlinecitationset_100301.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,616 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/OMSSA.mod.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,616 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/isogrk1.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,616 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/bookdoc_150101.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,617 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_Cn3d.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,617 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/eLink_090910.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,617 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_TSeq.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,617 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_Mim.mod.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,618 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/eSearch_020511.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,618 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/chars.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,618 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/JATS-common1-3.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,618 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/isoamsb.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,619 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/MMDB_Structural_model.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,619 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/nlmmedline_090101.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,619 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_Submit.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,619 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/JATS-XHTMLtablesetup1-3.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,620 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/MMDB_Chemical_graph.mod.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,620 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/esearch.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,620 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_Remap.mod.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,620 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/modules.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,621 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/mathmlsetup.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,621 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/nlmserials_100101.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,621 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/mmlextra.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,621 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_Entrezgene.mod.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,622 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/link.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,622 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/pubmed_130501.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,622 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/isogrk2.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,622 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/mathml2-qname-1.mod -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,622 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/phrase.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,623 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/pubmed_080101.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,623 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_Project.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,623 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_Biblio.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,623 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/JATS-section1-3.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,624 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_Cdd.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,624 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/pubmed_180601.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,624 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_TxInit.mod.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,624 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/Docsum_3_4.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,625 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_ScoreMat.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,625 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/esummary-v1.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,625 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/bookdoc_140101.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,625 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/nlm-articleset-2.0.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,626 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/bookdoc_120101.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,626 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/EMBL_General.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,626 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_Submit.mod.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,626 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/Docsum_3_3.mod.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,627 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/xmlspecchars.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,627 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_ObjPrt.mod.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,627 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_Entity.mod.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,627 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_Seqfeat.mod.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,628 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/list.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,628 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/esummary_clinvar.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,628 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/PRF_General.mod.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,628 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_Pub.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,628 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/htmltable.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,629 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_Protein.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,629 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/pubmed_190101.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,629 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/isomfrk.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,629 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_ObjPrt.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,630 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/MMDB_Features.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,630 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/JATS-articlemeta1-3.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,630 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_Sequence.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,631 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_Rsite.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,631 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/pubmed_090101.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,631 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/isomscr.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,631 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/mathml3-qname1.mod -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,631 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/nlmcommon_011101.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,632 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/pubmed_150101.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,632 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/HomoloGene.mod.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,632 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NSE.mod.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,632 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/nlmmedlinecitationset_100101.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,633 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/isogrk4.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,633 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/Docsum_3_2.mod.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,633 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_ID1Access.mod.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,633 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_SeqCode.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,634 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/isopub.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,634 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/nlmmedline_080101.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,634 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/isolat2.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,634 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/isoamso.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,635 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/eInfo_020511.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,635 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/mmlalias.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,635 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_PCSubstance.mod.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,635 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/bookdoc_100301.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,636 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/Docsum_3_3.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,636 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_GBSeq.mod.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,636 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/elink_020122.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,636 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/Docsum_3_0.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,636 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/esummary_gene.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,637 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/mathml2.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,637 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/JATS-common-atts1-3.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,637 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_Access.mod.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,637 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_Blast4.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,638 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/JATS-references1-3.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,638 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_Mime.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,638 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_BlastOutput.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,638 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_TSeq.mod.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,639 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_FeatDef.mod.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,639 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_Variation.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,639 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_GBSeq.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,639 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_ScoreMat.mod.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,640 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_Biblio.mod.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,640 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/Docsum_3_1.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,640 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/PIR_General.mod.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,640 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_BlastDL.mod.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,641 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/JATS-archivecustom-mixes1-3.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,641 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/einfo.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,641 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_PCAssay.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,641 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_Organism.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,642 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/OMSSA.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,642 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/JATS-funding1-3.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,642 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/pubmed_100301.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,642 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_Seq_split.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,642 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/PIR_General.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,643 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_Organism.mod.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,643 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/pubmed_140101.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,643 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/EMBL_General.mod.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,643 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_FeatDef.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,644 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_BioTree.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,644 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/JATS-link1-3.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,644 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/isocyr1.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,644 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/para.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,645 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/nlmmedlinecitation_080101.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,645 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/isolat1.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,645 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_Cn3d.mod.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,645 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/nlmcommon_090101.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,645 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_BioTree.mod.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,646 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_ID1Access.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,646 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_Seq_split.mod.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,646 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_PubMed.mod.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,646 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/archivearticle.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,647 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/format.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,647 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/ePost_020511.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,647 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/xhtml-inlstyle-1.mod -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,647 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_General.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,648 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/nlmmedlinecitation_090101.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,648 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_RNA.mod.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,648 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/NCBI_Systems.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,648 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/journalmeta.ent -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,648 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/DTDs/MMDB_Structural_model.mod.dtd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/DTDs 2025-11-20 00:44:52,649 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/Parser.py -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez 2025-11-20 00:44:52,649 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/__init__.py -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez 2025-11-20 00:44:52,649 root INFO creating build/bdist.linux-ppc64le/wheel/Bio/Entrez/XSDs 2025-11-20 00:44:52,650 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/XSDs/NCBI_BlastOutput2.mod.xsd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/XSDs 2025-11-20 00:44:52,650 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/XSDs/IPGReportSet.xsd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/XSDs 2025-11-20 00:44:52,650 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Entrez/XSDs/NCBI_BlastOutput2.xsd -> build/bdist.linux-ppc64le/wheel/./Bio/Entrez/XSDs 2025-11-20 00:44:52,651 root INFO creating build/bdist.linux-ppc64le/wheel/Bio/SeqUtils 2025-11-20 00:44:52,651 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/SeqUtils/MeltingTemp.py -> build/bdist.linux-ppc64le/wheel/./Bio/SeqUtils 2025-11-20 00:44:52,651 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/SeqUtils/CheckSum.py -> build/bdist.linux-ppc64le/wheel/./Bio/SeqUtils 2025-11-20 00:44:52,651 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/SeqUtils/IsoelectricPoint.py -> build/bdist.linux-ppc64le/wheel/./Bio/SeqUtils 2025-11-20 00:44:52,651 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/SeqUtils/ProtParamData.py -> build/bdist.linux-ppc64le/wheel/./Bio/SeqUtils 2025-11-20 00:44:52,652 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/SeqUtils/lcc.py -> build/bdist.linux-ppc64le/wheel/./Bio/SeqUtils 2025-11-20 00:44:52,652 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/SeqUtils/__init__.py -> build/bdist.linux-ppc64le/wheel/./Bio/SeqUtils 2025-11-20 00:44:52,652 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/SeqUtils/ProtParam.py -> build/bdist.linux-ppc64le/wheel/./Bio/SeqUtils 2025-11-20 00:44:52,652 root INFO creating build/bdist.linux-ppc64le/wheel/Bio/Data 2025-11-20 00:44:52,653 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Data/PDBData.py -> build/bdist.linux-ppc64le/wheel/./Bio/Data 2025-11-20 00:44:52,653 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Data/CodonTable.py -> build/bdist.linux-ppc64le/wheel/./Bio/Data 2025-11-20 00:44:52,653 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Data/IUPACData.py -> build/bdist.linux-ppc64le/wheel/./Bio/Data 2025-11-20 00:44:52,653 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Data/__init__.py -> build/bdist.linux-ppc64le/wheel/./Bio/Data 2025-11-20 00:44:52,654 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/cpairwise2module.c -> build/bdist.linux-ppc64le/wheel/./Bio 2025-11-20 00:44:52,654 root INFO creating build/bdist.linux-ppc64le/wheel/Bio/KEGG 2025-11-20 00:44:52,654 root INFO creating build/bdist.linux-ppc64le/wheel/Bio/KEGG/Map 2025-11-20 00:44:52,654 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/KEGG/Map/__init__.py -> build/bdist.linux-ppc64le/wheel/./Bio/KEGG/Map 2025-11-20 00:44:52,655 root INFO creating build/bdist.linux-ppc64le/wheel/Bio/KEGG/KGML 2025-11-20 00:44:52,655 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/KEGG/KGML/KGML_pathway.py -> build/bdist.linux-ppc64le/wheel/./Bio/KEGG/KGML 2025-11-20 00:44:52,655 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/KEGG/KGML/KGML_parser.py -> build/bdist.linux-ppc64le/wheel/./Bio/KEGG/KGML 2025-11-20 00:44:52,655 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/KEGG/KGML/__init__.py -> build/bdist.linux-ppc64le/wheel/./Bio/KEGG/KGML 2025-11-20 00:44:52,656 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/KEGG/REST.py -> build/bdist.linux-ppc64le/wheel/./Bio/KEGG 2025-11-20 00:44:52,656 root INFO creating build/bdist.linux-ppc64le/wheel/Bio/KEGG/Gene 2025-11-20 00:44:52,656 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/KEGG/Gene/__init__.py -> build/bdist.linux-ppc64le/wheel/./Bio/KEGG/Gene 2025-11-20 00:44:52,657 root INFO creating build/bdist.linux-ppc64le/wheel/Bio/KEGG/Enzyme 2025-11-20 00:44:52,657 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/KEGG/Enzyme/__init__.py -> build/bdist.linux-ppc64le/wheel/./Bio/KEGG/Enzyme 2025-11-20 00:44:52,657 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/KEGG/__init__.py -> build/bdist.linux-ppc64le/wheel/./Bio/KEGG 2025-11-20 00:44:52,657 root INFO creating build/bdist.linux-ppc64le/wheel/Bio/KEGG/Compound 2025-11-20 00:44:52,658 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/KEGG/Compound/__init__.py -> build/bdist.linux-ppc64le/wheel/./Bio/KEGG/Compound 2025-11-20 00:44:52,658 root INFO creating build/bdist.linux-ppc64le/wheel/Bio/UniGene 2025-11-20 00:44:52,658 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/UniGene/__init__.py -> build/bdist.linux-ppc64le/wheel/./Bio/UniGene 2025-11-20 00:44:52,658 root INFO creating build/bdist.linux-ppc64le/wheel/Bio/Graphics 2025-11-20 00:44:52,659 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Graphics/BasicChromosome.py -> build/bdist.linux-ppc64le/wheel/./Bio/Graphics 2025-11-20 00:44:52,659 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Graphics/KGML_vis.py -> build/bdist.linux-ppc64le/wheel/./Bio/Graphics 2025-11-20 00:44:52,659 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Graphics/ColorSpiral.py -> build/bdist.linux-ppc64le/wheel/./Bio/Graphics 2025-11-20 00:44:52,659 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Graphics/Comparative.py -> build/bdist.linux-ppc64le/wheel/./Bio/Graphics 2025-11-20 00:44:52,660 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Graphics/DisplayRepresentation.py -> build/bdist.linux-ppc64le/wheel/./Bio/Graphics 2025-11-20 00:44:52,660 root INFO creating build/bdist.linux-ppc64le/wheel/Bio/Graphics/GenomeDiagram 2025-11-20 00:44:52,660 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Graphics/GenomeDiagram/_CircularDrawer.py -> build/bdist.linux-ppc64le/wheel/./Bio/Graphics/GenomeDiagram 2025-11-20 00:44:52,660 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Graphics/GenomeDiagram/_Feature.py -> build/bdist.linux-ppc64le/wheel/./Bio/Graphics/GenomeDiagram 2025-11-20 00:44:52,661 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Graphics/GenomeDiagram/_Diagram.py -> build/bdist.linux-ppc64le/wheel/./Bio/Graphics/GenomeDiagram 2025-11-20 00:44:52,661 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Graphics/GenomeDiagram/_Colors.py -> build/bdist.linux-ppc64le/wheel/./Bio/Graphics/GenomeDiagram 2025-11-20 00:44:52,661 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Graphics/GenomeDiagram/_LinearDrawer.py -> build/bdist.linux-ppc64le/wheel/./Bio/Graphics/GenomeDiagram 2025-11-20 00:44:52,661 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Graphics/GenomeDiagram/_AbstractDrawer.py -> build/bdist.linux-ppc64le/wheel/./Bio/Graphics/GenomeDiagram 2025-11-20 00:44:52,662 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Graphics/GenomeDiagram/_FeatureSet.py -> build/bdist.linux-ppc64le/wheel/./Bio/Graphics/GenomeDiagram 2025-11-20 00:44:52,662 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Graphics/GenomeDiagram/_CrossLink.py -> build/bdist.linux-ppc64le/wheel/./Bio/Graphics/GenomeDiagram 2025-11-20 00:44:52,662 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Graphics/GenomeDiagram/_GraphSet.py -> build/bdist.linux-ppc64le/wheel/./Bio/Graphics/GenomeDiagram 2025-11-20 00:44:52,662 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Graphics/GenomeDiagram/_Graph.py -> build/bdist.linux-ppc64le/wheel/./Bio/Graphics/GenomeDiagram 2025-11-20 00:44:52,663 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Graphics/GenomeDiagram/_Track.py -> build/bdist.linux-ppc64le/wheel/./Bio/Graphics/GenomeDiagram 2025-11-20 00:44:52,663 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Graphics/GenomeDiagram/__init__.py -> build/bdist.linux-ppc64le/wheel/./Bio/Graphics/GenomeDiagram 2025-11-20 00:44:52,663 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Graphics/Distribution.py -> build/bdist.linux-ppc64le/wheel/./Bio/Graphics 2025-11-20 00:44:52,663 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Graphics/__init__.py -> build/bdist.linux-ppc64le/wheel/./Bio/Graphics 2025-11-20 00:44:52,664 root INFO creating build/bdist.linux-ppc64le/wheel/Bio/TogoWS 2025-11-20 00:44:52,664 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/TogoWS/__init__.py -> build/bdist.linux-ppc64le/wheel/./Bio/TogoWS 2025-11-20 00:44:52,664 root INFO creating build/bdist.linux-ppc64le/wheel/Bio/Affy 2025-11-20 00:44:52,664 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Affy/CelFile.py -> build/bdist.linux-ppc64le/wheel/./Bio/Affy 2025-11-20 00:44:52,665 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Affy/__init__.py -> build/bdist.linux-ppc64le/wheel/./Bio/Affy 2025-11-20 00:44:52,665 root INFO creating build/bdist.linux-ppc64le/wheel/Bio/CAPS 2025-11-20 00:44:52,665 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/CAPS/__init__.py -> build/bdist.linux-ppc64le/wheel/./Bio/CAPS 2025-11-20 00:44:52,665 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/SeqRecord.py -> build/bdist.linux-ppc64le/wheel/./Bio 2025-11-20 00:44:52,666 root INFO creating build/bdist.linux-ppc64le/wheel/Bio/Sequencing 2025-11-20 00:44:52,666 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Sequencing/Ace.py -> build/bdist.linux-ppc64le/wheel/./Bio/Sequencing 2025-11-20 00:44:52,666 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Sequencing/Phd.py -> build/bdist.linux-ppc64le/wheel/./Bio/Sequencing 2025-11-20 00:44:52,666 root INFO creating build/bdist.linux-ppc64le/wheel/Bio/Sequencing/Applications 2025-11-20 00:44:52,667 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Sequencing/Applications/_Novoalign.py -> build/bdist.linux-ppc64le/wheel/./Bio/Sequencing/Applications 2025-11-20 00:44:52,667 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Sequencing/Applications/_bwa.py -> build/bdist.linux-ppc64le/wheel/./Bio/Sequencing/Applications 2025-11-20 00:44:52,667 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Sequencing/Applications/__init__.py -> build/bdist.linux-ppc64le/wheel/./Bio/Sequencing/Applications 2025-11-20 00:44:52,667 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Sequencing/Applications/_samtools.py -> build/bdist.linux-ppc64le/wheel/./Bio/Sequencing/Applications 2025-11-20 00:44:52,668 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Sequencing/__init__.py -> build/bdist.linux-ppc64le/wheel/./Bio/Sequencing 2025-11-20 00:44:52,668 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/py.typed -> build/bdist.linux-ppc64le/wheel/./Bio 2025-11-20 00:44:52,668 root INFO creating build/bdist.linux-ppc64le/wheel/Bio/Restriction 2025-11-20 00:44:52,668 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Restriction/Restriction.py -> build/bdist.linux-ppc64le/wheel/./Bio/Restriction 2025-11-20 00:44:52,669 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Restriction/PrintFormat.py -> build/bdist.linux-ppc64le/wheel/./Bio/Restriction 2025-11-20 00:44:52,669 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Restriction/Restriction_Dictionary.py -> build/bdist.linux-ppc64le/wheel/./Bio/Restriction 2025-11-20 00:44:52,670 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Restriction/__init__.py -> build/bdist.linux-ppc64le/wheel/./Bio/Restriction 2025-11-20 00:44:52,670 root INFO creating build/bdist.linux-ppc64le/wheel/Bio/SVDSuperimposer 2025-11-20 00:44:52,670 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/SVDSuperimposer/__init__.py -> build/bdist.linux-ppc64le/wheel/./Bio/SVDSuperimposer 2025-11-20 00:44:52,670 root INFO creating build/bdist.linux-ppc64le/wheel/Bio/SwissProt 2025-11-20 00:44:52,671 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/SwissProt/KeyWList.py -> build/bdist.linux-ppc64le/wheel/./Bio/SwissProt 2025-11-20 00:44:52,671 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/SwissProt/__init__.py -> build/bdist.linux-ppc64le/wheel/./Bio/SwissProt 2025-11-20 00:44:52,671 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/__init__.py -> build/bdist.linux-ppc64le/wheel/./Bio 2025-11-20 00:44:52,671 root INFO creating build/bdist.linux-ppc64le/wheel/Bio/Phylo 2025-11-20 00:44:52,672 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Phylo/Newick.py -> build/bdist.linux-ppc64le/wheel/./Bio/Phylo 2025-11-20 00:44:52,672 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Phylo/NexusIO.py -> build/bdist.linux-ppc64le/wheel/./Bio/Phylo 2025-11-20 00:44:52,672 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Phylo/_io.py -> build/bdist.linux-ppc64le/wheel/./Bio/Phylo 2025-11-20 00:44:52,672 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Phylo/Consensus.py -> build/bdist.linux-ppc64le/wheel/./Bio/Phylo 2025-11-20 00:44:52,673 root INFO creating build/bdist.linux-ppc64le/wheel/Bio/Phylo/Applications 2025-11-20 00:44:52,673 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Phylo/Applications/_Phyml.py -> build/bdist.linux-ppc64le/wheel/./Bio/Phylo/Applications 2025-11-20 00:44:52,673 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Phylo/Applications/_Fasttree.py -> build/bdist.linux-ppc64le/wheel/./Bio/Phylo/Applications 2025-11-20 00:44:52,673 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Phylo/Applications/__init__.py -> build/bdist.linux-ppc64le/wheel/./Bio/Phylo/Applications 2025-11-20 00:44:52,674 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Phylo/Applications/_Raxml.py -> build/bdist.linux-ppc64le/wheel/./Bio/Phylo/Applications 2025-11-20 00:44:52,674 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Phylo/TreeConstruction.py -> build/bdist.linux-ppc64le/wheel/./Bio/Phylo 2025-11-20 00:44:52,674 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Phylo/PhyloXMLIO.py -> build/bdist.linux-ppc64le/wheel/./Bio/Phylo 2025-11-20 00:44:52,674 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Phylo/CDAOIO.py -> build/bdist.linux-ppc64le/wheel/./Bio/Phylo 2025-11-20 00:44:52,675 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Phylo/CDAO.py -> build/bdist.linux-ppc64le/wheel/./Bio/Phylo 2025-11-20 00:44:52,675 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Phylo/NewickIO.py -> build/bdist.linux-ppc64le/wheel/./Bio/Phylo 2025-11-20 00:44:52,675 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Phylo/NeXMLIO.py -> build/bdist.linux-ppc64le/wheel/./Bio/Phylo 2025-11-20 00:44:52,675 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Phylo/BaseTree.py -> build/bdist.linux-ppc64le/wheel/./Bio/Phylo 2025-11-20 00:44:52,675 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Phylo/NeXML.py -> build/bdist.linux-ppc64le/wheel/./Bio/Phylo 2025-11-20 00:44:52,676 root INFO creating build/bdist.linux-ppc64le/wheel/Bio/Phylo/PAML 2025-11-20 00:44:52,676 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Phylo/PAML/_parse_baseml.py -> build/bdist.linux-ppc64le/wheel/./Bio/Phylo/PAML 2025-11-20 00:44:52,676 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Phylo/PAML/codeml.py -> build/bdist.linux-ppc64le/wheel/./Bio/Phylo/PAML 2025-11-20 00:44:52,676 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Phylo/PAML/_parse_codeml.py -> build/bdist.linux-ppc64le/wheel/./Bio/Phylo/PAML 2025-11-20 00:44:52,677 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Phylo/PAML/chi2.py -> build/bdist.linux-ppc64le/wheel/./Bio/Phylo/PAML 2025-11-20 00:44:52,677 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Phylo/PAML/baseml.py -> build/bdist.linux-ppc64le/wheel/./Bio/Phylo/PAML 2025-11-20 00:44:52,677 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Phylo/PAML/__init__.py -> build/bdist.linux-ppc64le/wheel/./Bio/Phylo/PAML 2025-11-20 00:44:52,677 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Phylo/PAML/_paml.py -> build/bdist.linux-ppc64le/wheel/./Bio/Phylo/PAML 2025-11-20 00:44:52,678 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Phylo/PAML/_parse_yn00.py -> build/bdist.linux-ppc64le/wheel/./Bio/Phylo/PAML 2025-11-20 00:44:52,678 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Phylo/PAML/yn00.py -> build/bdist.linux-ppc64le/wheel/./Bio/Phylo/PAML 2025-11-20 00:44:52,678 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Phylo/_cdao_owl.py -> build/bdist.linux-ppc64le/wheel/./Bio/Phylo 2025-11-20 00:44:52,678 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Phylo/__init__.py -> build/bdist.linux-ppc64le/wheel/./Bio/Phylo 2025-11-20 00:44:52,679 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Phylo/PhyloXML.py -> build/bdist.linux-ppc64le/wheel/./Bio/Phylo 2025-11-20 00:44:52,679 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Phylo/_utils.py -> build/bdist.linux-ppc64le/wheel/./Bio/Phylo 2025-11-20 00:44:52,679 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/_utils.py -> build/bdist.linux-ppc64le/wheel/./Bio 2025-11-20 00:44:52,679 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/Seq.py -> build/bdist.linux-ppc64le/wheel/./Bio 2025-11-20 00:44:52,680 root INFO creating build/bdist.linux-ppc64le/wheel/Bio/PopGen 2025-11-20 00:44:52,680 root INFO creating build/bdist.linux-ppc64le/wheel/Bio/PopGen/GenePop 2025-11-20 00:44:52,681 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/PopGen/GenePop/FileParser.py -> build/bdist.linux-ppc64le/wheel/./Bio/PopGen/GenePop 2025-11-20 00:44:52,681 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/PopGen/GenePop/Controller.py -> build/bdist.linux-ppc64le/wheel/./Bio/PopGen/GenePop 2025-11-20 00:44:52,681 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/PopGen/GenePop/LargeFileParser.py -> build/bdist.linux-ppc64le/wheel/./Bio/PopGen/GenePop 2025-11-20 00:44:52,681 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/PopGen/GenePop/EasyController.py -> build/bdist.linux-ppc64le/wheel/./Bio/PopGen/GenePop 2025-11-20 00:44:52,682 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/PopGen/GenePop/__init__.py -> build/bdist.linux-ppc64le/wheel/./Bio/PopGen/GenePop 2025-11-20 00:44:52,682 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/PopGen/__init__.py -> build/bdist.linux-ppc64le/wheel/./Bio/PopGen 2025-11-20 00:44:52,682 root INFO creating build/bdist.linux-ppc64le/wheel/Bio/SeqIO 2025-11-20 00:44:52,683 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/SeqIO/PirIO.py -> build/bdist.linux-ppc64le/wheel/./Bio/SeqIO 2025-11-20 00:44:52,683 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/SeqIO/SwissIO.py -> build/bdist.linux-ppc64le/wheel/./Bio/SeqIO 2025-11-20 00:44:52,683 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/SeqIO/InsdcIO.py -> build/bdist.linux-ppc64le/wheel/./Bio/SeqIO 2025-11-20 00:44:52,683 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/SeqIO/NibIO.py -> build/bdist.linux-ppc64le/wheel/./Bio/SeqIO 2025-11-20 00:44:52,684 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/SeqIO/_twoBitIO.c -> build/bdist.linux-ppc64le/wheel/./Bio/SeqIO 2025-11-20 00:44:52,684 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/SeqIO/PhdIO.py -> build/bdist.linux-ppc64le/wheel/./Bio/SeqIO 2025-11-20 00:44:52,684 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/SeqIO/_index.py -> build/bdist.linux-ppc64le/wheel/./Bio/SeqIO 2025-11-20 00:44:52,684 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/SeqIO/UniprotIO.py -> build/bdist.linux-ppc64le/wheel/./Bio/SeqIO 2025-11-20 00:44:52,685 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/SeqIO/FastaIO.py -> build/bdist.linux-ppc64le/wheel/./Bio/SeqIO 2025-11-20 00:44:52,685 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/SeqIO/_twoBitIO.cpython-312-powerpc64le-linux-musl.so -> build/bdist.linux-ppc64le/wheel/./Bio/SeqIO 2025-11-20 00:44:52,685 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/SeqIO/TabIO.py -> build/bdist.linux-ppc64le/wheel/./Bio/SeqIO 2025-11-20 00:44:52,686 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/SeqIO/GckIO.py -> build/bdist.linux-ppc64le/wheel/./Bio/SeqIO 2025-11-20 00:44:52,686 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/SeqIO/PdbIO.py -> build/bdist.linux-ppc64le/wheel/./Bio/SeqIO 2025-11-20 00:44:52,686 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/SeqIO/SffIO.py -> build/bdist.linux-ppc64le/wheel/./Bio/SeqIO 2025-11-20 00:44:52,686 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/SeqIO/IgIO.py -> build/bdist.linux-ppc64le/wheel/./Bio/SeqIO 2025-11-20 00:44:52,687 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/SeqIO/GfaIO.py -> build/bdist.linux-ppc64le/wheel/./Bio/SeqIO 2025-11-20 00:44:52,687 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/SeqIO/SnapGeneIO.py -> build/bdist.linux-ppc64le/wheel/./Bio/SeqIO 2025-11-20 00:44:52,687 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/SeqIO/TwoBitIO.py -> build/bdist.linux-ppc64le/wheel/./Bio/SeqIO 2025-11-20 00:44:52,687 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/SeqIO/AceIO.py -> build/bdist.linux-ppc64le/wheel/./Bio/SeqIO 2025-11-20 00:44:52,688 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/SeqIO/QualityIO.py -> build/bdist.linux-ppc64le/wheel/./Bio/SeqIO 2025-11-20 00:44:52,688 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/SeqIO/__init__.py -> build/bdist.linux-ppc64le/wheel/./Bio/SeqIO 2025-11-20 00:44:52,688 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/SeqIO/SeqXmlIO.py -> build/bdist.linux-ppc64le/wheel/./Bio/SeqIO 2025-11-20 00:44:52,689 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/SeqIO/Interfaces.py -> build/bdist.linux-ppc64le/wheel/./Bio/SeqIO 2025-11-20 00:44:52,689 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/SeqIO/XdnaIO.py -> build/bdist.linux-ppc64le/wheel/./Bio/SeqIO 2025-11-20 00:44:52,689 root INFO copying build/lib.linux-ppc64le-cpython-312/Bio/SeqIO/AbiIO.py -> build/bdist.linux-ppc64le/wheel/./Bio/SeqIO 2025-11-20 00:44:52,690 root INFO running install_egg_info 2025-11-20 00:44:52,697 root INFO Copying biopython.egg-info to build/bdist.linux-ppc64le/wheel/./biopython-1.85-py3.12.egg-info 2025-11-20 00:44:52,699 root INFO running install_scripts 2025-11-20 00:44:52,708 root INFO creating build/bdist.linux-ppc64le/wheel/biopython-1.85.dist-info/WHEEL 2025-11-20 00:44:52,709 wheel INFO creating '/home/buildozer/aports/community/py3-biopython/src/biopython-1.85/.dist/.tmp-hjhfw7ql/biopython-1.85-cp312-cp312-linux_ppc64le.whl' and adding 'build/bdist.linux-ppc64le/wheel' to it 2025-11-20 00:44:52,709 wheel INFO adding 'Bio/File.py' 2025-11-20 00:44:52,710 wheel INFO adding 'Bio/LogisticRegression.py' 2025-11-20 00:44:52,710 wheel INFO adding 'Bio/MarkovModel.py' 2025-11-20 00:44:52,710 wheel INFO adding 'Bio/MaxEntropy.py' 2025-11-20 00:44:52,711 wheel INFO adding 'Bio/NaiveBayes.py' 2025-11-20 00:44:52,711 wheel INFO adding 'Bio/Seq.py' 2025-11-20 00:44:52,712 wheel INFO adding 'Bio/SeqFeature.py' 2025-11-20 00:44:52,712 wheel INFO adding 'Bio/SeqRecord.py' 2025-11-20 00:44:52,713 wheel INFO adding 'Bio/__init__.py' 2025-11-20 00:44:52,713 wheel INFO adding 'Bio/_utils.py' 2025-11-20 00:44:52,713 wheel INFO adding 'Bio/bgzf.py' 2025-11-20 00:44:52,714 wheel INFO adding 'Bio/cpairwise2.cpython-312-powerpc64le-linux-musl.so' 2025-11-20 00:44:52,714 wheel INFO adding 'Bio/cpairwise2module.c' 2025-11-20 00:44:52,715 wheel INFO adding 'Bio/kNN.py' 2025-11-20 00:44:52,715 wheel INFO adding 'Bio/pairwise2.py' 2025-11-20 00:44:52,715 wheel INFO adding 'Bio/py.typed' 2025-11-20 00:44:52,716 wheel INFO adding 'Bio/Affy/CelFile.py' 2025-11-20 00:44:52,716 wheel INFO adding 'Bio/Affy/__init__.py' 2025-11-20 00:44:52,717 wheel INFO adding 'Bio/Align/AlignInfo.py' 2025-11-20 00:44:52,717 wheel INFO adding 'Bio/Align/__init__.py' 2025-11-20 00:44:52,718 wheel INFO adding 'Bio/Align/_aligncore.c' 2025-11-20 00:44:52,718 wheel INFO adding 'Bio/Align/_aligncore.cpython-312-powerpc64le-linux-musl.so' 2025-11-20 00:44:52,719 wheel INFO adding 'Bio/Align/_codonaligner.c' 2025-11-20 00:44:52,719 wheel INFO adding 'Bio/Align/_codonaligner.cpython-312-powerpc64le-linux-musl.so' 2025-11-20 00:44:52,720 wheel INFO adding 'Bio/Align/_pairwisealigner.c' 2025-11-20 00:44:52,721 wheel INFO adding 'Bio/Align/_pairwisealigner.cpython-312-powerpc64le-linux-musl.so' 2025-11-20 00:44:52,722 wheel INFO adding 'Bio/Align/a2m.py' 2025-11-20 00:44:52,723 wheel INFO adding 'Bio/Align/analysis.py' 2025-11-20 00:44:52,723 wheel INFO adding 'Bio/Align/bed.py' 2025-11-20 00:44:52,723 wheel INFO adding 'Bio/Align/bigbed.py' 2025-11-20 00:44:52,724 wheel INFO adding 'Bio/Align/bigmaf.py' 2025-11-20 00:44:52,724 wheel INFO adding 'Bio/Align/bigpsl.py' 2025-11-20 00:44:52,725 wheel INFO adding 'Bio/Align/chain.py' 2025-11-20 00:44:52,725 wheel INFO adding 'Bio/Align/clustal.py' 2025-11-20 00:44:52,725 wheel INFO adding 'Bio/Align/emboss.py' 2025-11-20 00:44:52,725 wheel INFO adding 'Bio/Align/exonerate.py' 2025-11-20 00:44:52,726 wheel INFO adding 'Bio/Align/fasta.py' 2025-11-20 00:44:52,726 wheel INFO adding 'Bio/Align/hhr.py' 2025-11-20 00:44:52,726 wheel INFO adding 'Bio/Align/interfaces.py' 2025-11-20 00:44:52,727 wheel INFO adding 'Bio/Align/maf.py' 2025-11-20 00:44:52,727 wheel INFO adding 'Bio/Align/mauve.py' 2025-11-20 00:44:52,727 wheel INFO adding 'Bio/Align/msf.py' 2025-11-20 00:44:52,727 wheel INFO adding 'Bio/Align/nexus.py' 2025-11-20 00:44:52,728 wheel INFO adding 'Bio/Align/phylip.py' 2025-11-20 00:44:52,728 wheel INFO adding 'Bio/Align/psl.py' 2025-11-20 00:44:52,728 wheel INFO adding 'Bio/Align/sam.py' 2025-11-20 00:44:52,729 wheel INFO adding 'Bio/Align/stockholm.py' 2025-11-20 00:44:52,729 wheel INFO adding 'Bio/Align/tabular.py' 2025-11-20 00:44:52,730 wheel INFO adding 'Bio/Align/Applications/_ClustalOmega.py' 2025-11-20 00:44:52,730 wheel INFO adding 'Bio/Align/Applications/_Clustalw.py' 2025-11-20 00:44:52,730 wheel INFO adding 'Bio/Align/Applications/_Dialign.py' 2025-11-20 00:44:52,730 wheel INFO adding 'Bio/Align/Applications/_MSAProbs.py' 2025-11-20 00:44:52,731 wheel INFO adding 'Bio/Align/Applications/_Mafft.py' 2025-11-20 00:44:52,731 wheel INFO adding 'Bio/Align/Applications/_Muscle.py' 2025-11-20 00:44:52,731 wheel INFO adding 'Bio/Align/Applications/_Prank.py' 2025-11-20 00:44:52,732 wheel INFO adding 'Bio/Align/Applications/_Probcons.py' 2025-11-20 00:44:52,732 wheel INFO adding 'Bio/Align/Applications/_TCoffee.py' 2025-11-20 00:44:52,732 wheel INFO adding 'Bio/Align/Applications/__init__.py' 2025-11-20 00:44:52,733 wheel INFO adding 'Bio/Align/substitution_matrices/__init__.py' 2025-11-20 00:44:52,733 wheel INFO adding 'Bio/Align/substitution_matrices/data/BENNER22' 2025-11-20 00:44:52,733 wheel INFO adding 'Bio/Align/substitution_matrices/data/BENNER6' 2025-11-20 00:44:52,733 wheel INFO adding 'Bio/Align/substitution_matrices/data/BENNER74' 2025-11-20 00:44:52,734 wheel INFO adding 'Bio/Align/substitution_matrices/data/BLASTN' 2025-11-20 00:44:52,734 wheel INFO adding 'Bio/Align/substitution_matrices/data/BLASTP' 2025-11-20 00:44:52,734 wheel INFO adding 'Bio/Align/substitution_matrices/data/BLOSUM45' 2025-11-20 00:44:52,735 wheel INFO adding 'Bio/Align/substitution_matrices/data/BLOSUM50' 2025-11-20 00:44:52,735 wheel INFO adding 'Bio/Align/substitution_matrices/data/BLOSUM62' 2025-11-20 00:44:52,735 wheel INFO adding 'Bio/Align/substitution_matrices/data/BLOSUM80' 2025-11-20 00:44:52,735 wheel INFO adding 'Bio/Align/substitution_matrices/data/BLOSUM90' 2025-11-20 00:44:52,736 wheel INFO adding 'Bio/Align/substitution_matrices/data/DAYHOFF' 2025-11-20 00:44:52,736 wheel INFO adding 'Bio/Align/substitution_matrices/data/FENG' 2025-11-20 00:44:52,736 wheel INFO adding 'Bio/Align/substitution_matrices/data/GENETIC' 2025-11-20 00:44:52,736 wheel INFO adding 'Bio/Align/substitution_matrices/data/GONNET1992' 2025-11-20 00:44:52,737 wheel INFO adding 'Bio/Align/substitution_matrices/data/HOXD70' 2025-11-20 00:44:52,737 wheel INFO adding 'Bio/Align/substitution_matrices/data/JOHNSON' 2025-11-20 00:44:52,737 wheel INFO adding 'Bio/Align/substitution_matrices/data/JONES' 2025-11-20 00:44:52,737 wheel INFO adding 'Bio/Align/substitution_matrices/data/LEVIN' 2025-11-20 00:44:52,738 wheel INFO adding 'Bio/Align/substitution_matrices/data/MCLACHLAN' 2025-11-20 00:44:52,738 wheel INFO adding 'Bio/Align/substitution_matrices/data/MDM78' 2025-11-20 00:44:52,738 wheel INFO adding 'Bio/Align/substitution_matrices/data/MEGABLAST' 2025-11-20 00:44:52,738 wheel INFO adding 'Bio/Align/substitution_matrices/data/NUC.4.4' 2025-11-20 00:44:52,739 wheel INFO adding 'Bio/Align/substitution_matrices/data/PAM250' 2025-11-20 00:44:52,739 wheel INFO adding 'Bio/Align/substitution_matrices/data/PAM30' 2025-11-20 00:44:52,739 wheel INFO adding 'Bio/Align/substitution_matrices/data/PAM70' 2025-11-20 00:44:52,739 wheel INFO adding 'Bio/Align/substitution_matrices/data/RAO' 2025-11-20 00:44:52,740 wheel INFO adding 'Bio/Align/substitution_matrices/data/RISLER' 2025-11-20 00:44:52,740 wheel INFO adding 'Bio/Align/substitution_matrices/data/SCHNEIDER' 2025-11-20 00:44:52,740 wheel INFO adding 'Bio/Align/substitution_matrices/data/STR' 2025-11-20 00:44:52,741 wheel INFO adding 'Bio/Align/substitution_matrices/data/TRANS' 2025-11-20 00:44:52,741 wheel INFO adding 'Bio/AlignIO/ClustalIO.py' 2025-11-20 00:44:52,741 wheel INFO adding 'Bio/AlignIO/EmbossIO.py' 2025-11-20 00:44:52,741 wheel INFO adding 'Bio/AlignIO/FastaIO.py' 2025-11-20 00:44:52,742 wheel INFO adding 'Bio/AlignIO/Interfaces.py' 2025-11-20 00:44:52,742 wheel INFO adding 'Bio/AlignIO/MafIO.py' 2025-11-20 00:44:52,742 wheel INFO adding 'Bio/AlignIO/MauveIO.py' 2025-11-20 00:44:52,743 wheel INFO adding 'Bio/AlignIO/MsfIO.py' 2025-11-20 00:44:52,743 wheel INFO adding 'Bio/AlignIO/NexusIO.py' 2025-11-20 00:44:52,743 wheel INFO adding 'Bio/AlignIO/PhylipIO.py' 2025-11-20 00:44:52,744 wheel INFO adding 'Bio/AlignIO/StockholmIO.py' 2025-11-20 00:44:52,744 wheel INFO adding 'Bio/AlignIO/__init__.py' 2025-11-20 00:44:52,744 wheel INFO adding 'Bio/Alphabet/__init__.py' 2025-11-20 00:44:52,745 wheel INFO adding 'Bio/Application/__init__.py' 2025-11-20 00:44:52,745 wheel INFO adding 'Bio/Blast/Applications.py' 2025-11-20 00:44:52,746 wheel INFO adding 'Bio/Blast/NCBIWWW.py' 2025-11-20 00:44:52,746 wheel INFO adding 'Bio/Blast/NCBIXML.py' 2025-11-20 00:44:52,746 wheel INFO adding 'Bio/Blast/__init__.py' 2025-11-20 00:44:52,747 wheel INFO adding 'Bio/Blast/_parser.py' 2025-11-20 00:44:52,747 wheel INFO adding 'Bio/Blast/_writers.py' 2025-11-20 00:44:52,748 wheel INFO adding 'Bio/CAPS/__init__.py' 2025-11-20 00:44:52,748 wheel INFO adding 'Bio/Cluster/__init__.py' 2025-11-20 00:44:52,749 wheel INFO adding 'Bio/Cluster/_cluster.cpython-312-powerpc64le-linux-musl.so' 2025-11-20 00:44:52,750 wheel INFO adding 'Bio/Cluster/cluster.c' 2025-11-20 00:44:52,750 wheel INFO adding 'Bio/Cluster/cluster.h' 2025-11-20 00:44:52,751 wheel INFO adding 'Bio/Cluster/clustermodule.c' 2025-11-20 00:44:52,751 wheel INFO adding 'Bio/Compass/__init__.py' 2025-11-20 00:44:52,751 wheel INFO adding 'Bio/Data/CodonTable.py' 2025-11-20 00:44:52,752 wheel INFO adding 'Bio/Data/IUPACData.py' 2025-11-20 00:44:52,752 wheel INFO adding 'Bio/Data/PDBData.py' 2025-11-20 00:44:52,753 wheel INFO adding 'Bio/Data/__init__.py' 2025-11-20 00:44:52,753 wheel INFO adding 'Bio/Emboss/Applications.py' 2025-11-20 00:44:52,753 wheel INFO adding 'Bio/Emboss/Primer3.py' 2025-11-20 00:44:52,754 wheel INFO adding 'Bio/Emboss/PrimerSearch.py' 2025-11-20 00:44:52,754 wheel INFO adding 'Bio/Emboss/__init__.py' 2025-11-20 00:44:52,754 wheel INFO adding 'Bio/Entrez/Parser.py' 2025-11-20 00:44:52,755 wheel INFO adding 'Bio/Entrez/__init__.py' 2025-11-20 00:44:52,756 wheel INFO adding 'Bio/Entrez/DTDs/BITS-embedded-index2.ent' 2025-11-20 00:44:52,756 wheel INFO adding 'Bio/Entrez/DTDs/BITS-question-answer2.ent' 2025-11-20 00:44:52,756 wheel INFO adding 'Bio/Entrez/DTDs/Docsum_3_0.dtd' 2025-11-20 00:44:52,757 wheel INFO adding 'Bio/Entrez/DTDs/Docsum_3_0.mod.dtd' 2025-11-20 00:44:52,757 wheel INFO adding 'Bio/Entrez/DTDs/Docsum_3_1.dtd' 2025-11-20 00:44:52,757 wheel INFO adding 'Bio/Entrez/DTDs/Docsum_3_1.mod.dtd' 2025-11-20 00:44:52,758 wheel INFO adding 'Bio/Entrez/DTDs/Docsum_3_2.dtd' 2025-11-20 00:44:52,758 wheel INFO adding 'Bio/Entrez/DTDs/Docsum_3_2.mod.dtd' 2025-11-20 00:44:52,758 wheel INFO adding 'Bio/Entrez/DTDs/Docsum_3_3.dtd' 2025-11-20 00:44:52,759 wheel INFO adding 'Bio/Entrez/DTDs/Docsum_3_3.mod.dtd' 2025-11-20 00:44:52,759 wheel INFO adding 'Bio/Entrez/DTDs/Docsum_3_4.dtd' 2025-11-20 00:44:52,759 wheel INFO adding 'Bio/Entrez/DTDs/Docsum_3_4.mod.dtd' 2025-11-20 00:44:52,760 wheel INFO adding 'Bio/Entrez/DTDs/EMBL_General.dtd' 2025-11-20 00:44:52,760 wheel INFO adding 'Bio/Entrez/DTDs/EMBL_General.mod.dtd' 2025-11-20 00:44:52,760 wheel INFO adding 'Bio/Entrez/DTDs/GenBank_General.dtd' 2025-11-20 00:44:52,760 wheel INFO adding 'Bio/Entrez/DTDs/GenBank_General.mod.dtd' 2025-11-20 00:44:52,761 wheel INFO adding 'Bio/Entrez/DTDs/HomoloGene.dtd' 2025-11-20 00:44:52,761 wheel INFO adding 'Bio/Entrez/DTDs/HomoloGene.mod.dtd' 2025-11-20 00:44:52,761 wheel INFO adding 'Bio/Entrez/DTDs/INSD_INSDSeq.dtd' 2025-11-20 00:44:52,761 wheel INFO adding 'Bio/Entrez/DTDs/INSD_INSDSeq.mod.dtd' 2025-11-20 00:44:52,762 wheel INFO adding 'Bio/Entrez/DTDs/JATS-XHTMLtablesetup1-3.ent' 2025-11-20 00:44:52,762 wheel INFO adding 'Bio/Entrez/DTDs/JATS-ali-namespace1-3.ent' 2025-11-20 00:44:52,762 wheel INFO adding 'Bio/Entrez/DTDs/JATS-archivearticle1-3-mathml3.dtd' 2025-11-20 00:44:52,763 wheel INFO adding 'Bio/Entrez/DTDs/JATS-archivecustom-classes1-3.ent' 2025-11-20 00:44:52,763 wheel INFO adding 'Bio/Entrez/DTDs/JATS-archivecustom-mixes1-3.ent' 2025-11-20 00:44:52,764 wheel INFO adding 'Bio/Entrez/DTDs/JATS-archivecustom-models1-3.ent' 2025-11-20 00:44:52,764 wheel INFO adding 'Bio/Entrez/DTDs/JATS-archivecustom-modules1-3.ent' 2025-11-20 00:44:52,765 wheel INFO adding 'Bio/Entrez/DTDs/JATS-articlemeta1-3.ent' 2025-11-20 00:44:52,765 wheel INFO adding 'Bio/Entrez/DTDs/JATS-backmatter1-3.ent' 2025-11-20 00:44:52,766 wheel INFO adding 'Bio/Entrez/DTDs/JATS-chars1-3.ent' 2025-11-20 00:44:52,766 wheel INFO adding 'Bio/Entrez/DTDs/JATS-common-atts1-3.ent' 2025-11-20 00:44:52,767 wheel INFO adding 'Bio/Entrez/DTDs/JATS-common1-3.ent' 2025-11-20 00:44:52,768 wheel INFO adding 'Bio/Entrez/DTDs/JATS-default-classes1-3.ent' 2025-11-20 00:44:52,768 wheel INFO adding 'Bio/Entrez/DTDs/JATS-default-mixes1-3.ent' 2025-11-20 00:44:52,768 wheel INFO adding 'Bio/Entrez/DTDs/JATS-display1-3.ent' 2025-11-20 00:44:52,769 wheel INFO adding 'Bio/Entrez/DTDs/JATS-format1-3.ent' 2025-11-20 00:44:52,769 wheel INFO adding 'Bio/Entrez/DTDs/JATS-funding1-3.ent' 2025-11-20 00:44:52,770 wheel INFO adding 'Bio/Entrez/DTDs/JATS-journalmeta1-3.ent' 2025-11-20 00:44:52,770 wheel INFO adding 'Bio/Entrez/DTDs/JATS-link1-3.ent' 2025-11-20 00:44:52,771 wheel INFO adding 'Bio/Entrez/DTDs/JATS-list1-3.ent' 2025-11-20 00:44:52,771 wheel INFO adding 'Bio/Entrez/DTDs/JATS-math1-3.ent' 2025-11-20 00:44:52,771 wheel INFO adding 'Bio/Entrez/DTDs/JATS-mathml3-mathmlsetup1-3.ent' 2025-11-20 00:44:52,772 wheel INFO adding 'Bio/Entrez/DTDs/JATS-mathml3-modules1-3.ent' 2025-11-20 00:44:52,772 wheel INFO adding 'Bio/Entrez/DTDs/JATS-modules1-3.ent' 2025-11-20 00:44:52,772 wheel INFO adding 'Bio/Entrez/DTDs/JATS-nlmcitation1-3.ent' 2025-11-20 00:44:52,773 wheel INFO adding 'Bio/Entrez/DTDs/JATS-notat1-3.ent' 2025-11-20 00:44:52,773 wheel INFO adding 'Bio/Entrez/DTDs/JATS-para1-3.ent' 2025-11-20 00:44:52,773 wheel INFO adding 'Bio/Entrez/DTDs/JATS-phrase1-3.ent' 2025-11-20 00:44:52,774 wheel INFO adding 'Bio/Entrez/DTDs/JATS-references1-3.ent' 2025-11-20 00:44:52,774 wheel INFO adding 'Bio/Entrez/DTDs/JATS-related-object1-3.ent' 2025-11-20 00:44:52,775 wheel INFO adding 'Bio/Entrez/DTDs/JATS-section1-3.ent' 2025-11-20 00:44:52,775 wheel INFO adding 'Bio/Entrez/DTDs/JATS-xmlspecchars1-3.ent' 2025-11-20 00:44:52,775 wheel INFO adding 'Bio/Entrez/DTDs/MMDB.dtd' 2025-11-20 00:44:52,776 wheel INFO adding 'Bio/Entrez/DTDs/MMDB.mod.dtd' 2025-11-20 00:44:52,776 wheel INFO adding 'Bio/Entrez/DTDs/MMDB_Chemical_graph.dtd' 2025-11-20 00:44:52,776 wheel INFO adding 'Bio/Entrez/DTDs/MMDB_Chemical_graph.mod.dtd' 2025-11-20 00:44:52,777 wheel INFO adding 'Bio/Entrez/DTDs/MMDB_Features.dtd' 2025-11-20 00:44:52,777 wheel INFO adding 'Bio/Entrez/DTDs/MMDB_Features.mod.dtd' 2025-11-20 00:44:52,777 wheel INFO adding 'Bio/Entrez/DTDs/MMDB_Structural_model.dtd' 2025-11-20 00:44:52,777 wheel INFO adding 'Bio/Entrez/DTDs/MMDB_Structural_model.mod.dtd' 2025-11-20 00:44:52,778 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Access.dtd' 2025-11-20 00:44:52,778 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Access.mod.dtd' 2025-11-20 00:44:52,778 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Biblio.dtd' 2025-11-20 00:44:52,779 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Biblio.mod.dtd' 2025-11-20 00:44:52,779 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_BioSource.dtd' 2025-11-20 00:44:52,779 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_BioSource.mod.dtd' 2025-11-20 00:44:52,779 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_BioTree.dtd' 2025-11-20 00:44:52,780 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_BioTree.mod.dtd' 2025-11-20 00:44:52,780 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Blast4.dtd' 2025-11-20 00:44:52,780 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Blast4.mod.dtd' 2025-11-20 00:44:52,781 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_BlastDL.dtd' 2025-11-20 00:44:52,781 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_BlastDL.mod.dtd' 2025-11-20 00:44:52,781 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_BlastOutput.dtd' 2025-11-20 00:44:52,781 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_BlastOutput.mod.dtd' 2025-11-20 00:44:52,782 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Cdd.dtd' 2025-11-20 00:44:52,782 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Cdd.mod.dtd' 2025-11-20 00:44:52,782 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Cn3d.dtd' 2025-11-20 00:44:52,783 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Cn3d.mod.dtd' 2025-11-20 00:44:52,783 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Entity.mod.dtd' 2025-11-20 00:44:52,783 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Entrez2.dtd' 2025-11-20 00:44:52,783 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Entrez2.mod.dtd' 2025-11-20 00:44:52,784 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Entrezgene.dtd' 2025-11-20 00:44:52,784 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Entrezgene.mod.dtd' 2025-11-20 00:44:52,785 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_FeatDef.dtd' 2025-11-20 00:44:52,785 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_FeatDef.mod.dtd' 2025-11-20 00:44:52,786 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_GBSeq.dtd' 2025-11-20 00:44:52,786 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_GBSeq.mod.dtd' 2025-11-20 00:44:52,786 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Gene.dtd' 2025-11-20 00:44:52,786 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Gene.mod.dtd' 2025-11-20 00:44:52,787 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_General.dtd' 2025-11-20 00:44:52,787 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_General.mod.dtd' 2025-11-20 00:44:52,787 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_ID1Access.dtd' 2025-11-20 00:44:52,787 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_ID1Access.mod.dtd' 2025-11-20 00:44:52,788 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_ID2Access.dtd' 2025-11-20 00:44:52,788 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_ID2Access.mod.dtd' 2025-11-20 00:44:52,788 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_MedArchive.dtd' 2025-11-20 00:44:52,789 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_MedArchive.mod.dtd' 2025-11-20 00:44:52,789 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Medlars.dtd' 2025-11-20 00:44:52,789 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Medlars.mod.dtd' 2025-11-20 00:44:52,790 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Medline.dtd' 2025-11-20 00:44:52,790 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Medline.mod.dtd' 2025-11-20 00:44:52,790 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Mim.dtd' 2025-11-20 00:44:52,790 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Mim.mod.dtd' 2025-11-20 00:44:52,791 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Mime.dtd' 2025-11-20 00:44:52,791 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Mime.mod.dtd' 2025-11-20 00:44:52,791 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_ObjPrt.dtd' 2025-11-20 00:44:52,791 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_ObjPrt.mod.dtd' 2025-11-20 00:44:52,792 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Organism.dtd' 2025-11-20 00:44:52,792 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Organism.mod.dtd' 2025-11-20 00:44:52,792 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_PCAssay.dtd' 2025-11-20 00:44:52,793 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_PCAssay.mod.dtd' 2025-11-20 00:44:52,793 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_PCSubstance.dtd' 2025-11-20 00:44:52,793 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_PCSubstance.mod.dtd' 2025-11-20 00:44:52,794 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Project.dtd' 2025-11-20 00:44:52,794 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Project.mod.dtd' 2025-11-20 00:44:52,794 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Protein.dtd' 2025-11-20 00:44:52,794 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Protein.mod.dtd' 2025-11-20 00:44:52,795 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Pub.dtd' 2025-11-20 00:44:52,795 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Pub.mod.dtd' 2025-11-20 00:44:52,795 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_PubMed.dtd' 2025-11-20 00:44:52,795 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_PubMed.mod.dtd' 2025-11-20 00:44:52,796 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_RNA.dtd' 2025-11-20 00:44:52,796 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_RNA.mod.dtd' 2025-11-20 00:44:52,796 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Remap.dtd' 2025-11-20 00:44:52,796 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Remap.mod.dtd' 2025-11-20 00:44:52,797 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Rsite.dtd' 2025-11-20 00:44:52,797 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Rsite.mod.dtd' 2025-11-20 00:44:52,797 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_ScoreMat.dtd' 2025-11-20 00:44:52,797 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_ScoreMat.mod.dtd' 2025-11-20 00:44:52,798 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_SeqCode.dtd' 2025-11-20 00:44:52,798 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_SeqCode.mod.dtd' 2025-11-20 00:44:52,798 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_SeqTable.dtd' 2025-11-20 00:44:52,799 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_SeqTable.mod.dtd' 2025-11-20 00:44:52,799 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Seq_split.dtd' 2025-11-20 00:44:52,799 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Seq_split.mod.dtd' 2025-11-20 00:44:52,799 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Seqalign.dtd' 2025-11-20 00:44:52,800 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Seqalign.mod.dtd' 2025-11-20 00:44:52,800 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Seqfeat.dtd' 2025-11-20 00:44:52,800 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Seqfeat.mod.dtd' 2025-11-20 00:44:52,801 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Seqloc.dtd' 2025-11-20 00:44:52,801 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Seqloc.mod.dtd' 2025-11-20 00:44:52,801 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Seqres.dtd' 2025-11-20 00:44:52,801 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Seqres.mod.dtd' 2025-11-20 00:44:52,802 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Seqset.dtd' 2025-11-20 00:44:52,802 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Seqset.mod.dtd' 2025-11-20 00:44:52,802 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Sequence.dtd' 2025-11-20 00:44:52,802 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Sequence.mod.dtd' 2025-11-20 00:44:52,803 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Submit.dtd' 2025-11-20 00:44:52,803 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Submit.mod.dtd' 2025-11-20 00:44:52,803 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Systems.dtd' 2025-11-20 00:44:52,804 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_TSeq.dtd' 2025-11-20 00:44:52,804 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_TSeq.mod.dtd' 2025-11-20 00:44:52,804 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_TxInit.dtd' 2025-11-20 00:44:52,804 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_TxInit.mod.dtd' 2025-11-20 00:44:52,805 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Variation.dtd' 2025-11-20 00:44:52,805 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Variation.mod.dtd' 2025-11-20 00:44:52,805 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_all.dtd' 2025-11-20 00:44:52,806 wheel INFO adding 'Bio/Entrez/DTDs/NSE.dtd' 2025-11-20 00:44:52,806 wheel INFO adding 'Bio/Entrez/DTDs/NSE.mod.dtd' 2025-11-20 00:44:52,806 wheel INFO adding 'Bio/Entrez/DTDs/OMSSA.dtd' 2025-11-20 00:44:52,806 wheel INFO adding 'Bio/Entrez/DTDs/OMSSA.mod.dtd' 2025-11-20 00:44:52,807 wheel INFO adding 'Bio/Entrez/DTDs/PDB_General.dtd' 2025-11-20 00:44:52,807 wheel INFO adding 'Bio/Entrez/DTDs/PDB_General.mod.dtd' 2025-11-20 00:44:52,807 wheel INFO adding 'Bio/Entrez/DTDs/PIR_General.dtd' 2025-11-20 00:44:52,808 wheel INFO adding 'Bio/Entrez/DTDs/PIR_General.mod.dtd' 2025-11-20 00:44:52,808 wheel INFO adding 'Bio/Entrez/DTDs/PRF_General.dtd' 2025-11-20 00:44:52,808 wheel INFO adding 'Bio/Entrez/DTDs/PRF_General.mod.dtd' 2025-11-20 00:44:52,808 wheel INFO adding 'Bio/Entrez/DTDs/SP_General.dtd' 2025-11-20 00:44:52,809 wheel INFO adding 'Bio/Entrez/DTDs/SP_General.mod.dtd' 2025-11-20 00:44:52,809 wheel INFO adding 'Bio/Entrez/DTDs/XHTMLtablesetup.ent' 2025-11-20 00:44:52,809 wheel INFO adding 'Bio/Entrez/DTDs/archivearticle.dtd' 2025-11-20 00:44:52,810 wheel INFO adding 'Bio/Entrez/DTDs/archivecustom-classes.ent' 2025-11-20 00:44:52,810 wheel INFO adding 'Bio/Entrez/DTDs/archivecustom-mixes.ent' 2025-11-20 00:44:52,810 wheel INFO adding 'Bio/Entrez/DTDs/archivecustom-models.ent' 2025-11-20 00:44:52,811 wheel INFO adding 'Bio/Entrez/DTDs/archivecustom-modules.ent' 2025-11-20 00:44:52,811 wheel INFO adding 'Bio/Entrez/DTDs/articlemeta.ent' 2025-11-20 00:44:52,812 wheel INFO adding 'Bio/Entrez/DTDs/backmatter.ent' 2025-11-20 00:44:52,812 wheel INFO adding 'Bio/Entrez/DTDs/bookdoc_100301.dtd' 2025-11-20 00:44:52,812 wheel INFO adding 'Bio/Entrez/DTDs/bookdoc_110101.dtd' 2025-11-20 00:44:52,812 wheel INFO adding 'Bio/Entrez/DTDs/bookdoc_120101.dtd' 2025-11-20 00:44:52,813 wheel INFO adding 'Bio/Entrez/DTDs/bookdoc_130101.dtd' 2025-11-20 00:44:52,813 wheel INFO adding 'Bio/Entrez/DTDs/bookdoc_140101.dtd' 2025-11-20 00:44:52,813 wheel INFO adding 'Bio/Entrez/DTDs/bookdoc_150101.dtd' 2025-11-20 00:44:52,813 wheel INFO adding 'Bio/Entrez/DTDs/chars.ent' 2025-11-20 00:44:52,814 wheel INFO adding 'Bio/Entrez/DTDs/common.ent' 2025-11-20 00:44:52,815 wheel INFO adding 'Bio/Entrez/DTDs/default-classes.ent' 2025-11-20 00:44:52,815 wheel INFO adding 'Bio/Entrez/DTDs/default-mixes.ent' 2025-11-20 00:44:52,815 wheel INFO adding 'Bio/Entrez/DTDs/display.ent' 2025-11-20 00:44:52,816 wheel INFO adding 'Bio/Entrez/DTDs/eInfo_020511.dtd' 2025-11-20 00:44:52,816 wheel INFO adding 'Bio/Entrez/DTDs/eLink_090910.dtd' 2025-11-20 00:44:52,816 wheel INFO adding 'Bio/Entrez/DTDs/eLink_101123.dtd' 2025-11-20 00:44:52,817 wheel INFO adding 'Bio/Entrez/DTDs/ePost_020511.dtd' 2025-11-20 00:44:52,817 wheel INFO adding 'Bio/Entrez/DTDs/eSearch_020511.dtd' 2025-11-20 00:44:52,817 wheel INFO adding 'Bio/Entrez/DTDs/eSpell.dtd' 2025-11-20 00:44:52,817 wheel INFO adding 'Bio/Entrez/DTDs/eSummary_041029.dtd' 2025-11-20 00:44:52,818 wheel INFO adding 'Bio/Entrez/DTDs/egquery.dtd' 2025-11-20 00:44:52,818 wheel INFO adding 'Bio/Entrez/DTDs/einfo.dtd' 2025-11-20 00:44:52,818 wheel INFO adding 'Bio/Entrez/DTDs/elink.dtd' 2025-11-20 00:44:52,818 wheel INFO adding 'Bio/Entrez/DTDs/elink_020122.dtd' 2025-11-20 00:44:52,819 wheel INFO adding 'Bio/Entrez/DTDs/epost.dtd' 2025-11-20 00:44:52,819 wheel INFO adding 'Bio/Entrez/DTDs/esearch.dtd' 2025-11-20 00:44:52,819 wheel INFO adding 'Bio/Entrez/DTDs/esummary-v1.dtd' 2025-11-20 00:44:52,820 wheel INFO adding 'Bio/Entrez/DTDs/esummary_clinvar.dtd' 2025-11-20 00:44:52,820 wheel INFO adding 'Bio/Entrez/DTDs/esummary_gene.dtd' 2025-11-20 00:44:52,820 wheel INFO adding 'Bio/Entrez/DTDs/format.ent' 2025-11-20 00:44:52,820 wheel INFO adding 'Bio/Entrez/DTDs/htmltable.dtd' 2025-11-20 00:44:52,821 wheel INFO adding 'Bio/Entrez/DTDs/isoamsa.ent' 2025-11-20 00:44:52,821 wheel INFO adding 'Bio/Entrez/DTDs/isoamsb.ent' 2025-11-20 00:44:52,821 wheel INFO adding 'Bio/Entrez/DTDs/isoamsc.ent' 2025-11-20 00:44:52,822 wheel INFO adding 'Bio/Entrez/DTDs/isoamsn.ent' 2025-11-20 00:44:52,822 wheel INFO adding 'Bio/Entrez/DTDs/isoamso.ent' 2025-11-20 00:44:52,822 wheel INFO adding 'Bio/Entrez/DTDs/isoamsr.ent' 2025-11-20 00:44:52,822 wheel INFO adding 'Bio/Entrez/DTDs/isobox.ent' 2025-11-20 00:44:52,823 wheel INFO adding 'Bio/Entrez/DTDs/isocyr1.ent' 2025-11-20 00:44:52,823 wheel INFO adding 'Bio/Entrez/DTDs/isocyr2.ent' 2025-11-20 00:44:52,823 wheel INFO adding 'Bio/Entrez/DTDs/isodia.ent' 2025-11-20 00:44:52,823 wheel INFO adding 'Bio/Entrez/DTDs/isogrk1.ent' 2025-11-20 00:44:52,824 wheel INFO adding 'Bio/Entrez/DTDs/isogrk2.ent' 2025-11-20 00:44:52,824 wheel INFO adding 'Bio/Entrez/DTDs/isogrk3.ent' 2025-11-20 00:44:52,824 wheel INFO adding 'Bio/Entrez/DTDs/isogrk4.ent' 2025-11-20 00:44:52,825 wheel INFO adding 'Bio/Entrez/DTDs/isolat1.ent' 2025-11-20 00:44:52,825 wheel INFO adding 'Bio/Entrez/DTDs/isolat2.ent' 2025-11-20 00:44:52,825 wheel INFO adding 'Bio/Entrez/DTDs/isomfrk.ent' 2025-11-20 00:44:52,825 wheel INFO adding 'Bio/Entrez/DTDs/isomopf.ent' 2025-11-20 00:44:52,826 wheel INFO adding 'Bio/Entrez/DTDs/isomscr.ent' 2025-11-20 00:44:52,826 wheel INFO adding 'Bio/Entrez/DTDs/isonum.ent' 2025-11-20 00:44:52,826 wheel INFO adding 'Bio/Entrez/DTDs/isopub.ent' 2025-11-20 00:44:52,826 wheel INFO adding 'Bio/Entrez/DTDs/isotech.ent' 2025-11-20 00:44:52,827 wheel INFO adding 'Bio/Entrez/DTDs/journalmeta.ent' 2025-11-20 00:44:52,827 wheel INFO adding 'Bio/Entrez/DTDs/link.ent' 2025-11-20 00:44:52,827 wheel INFO adding 'Bio/Entrez/DTDs/list.ent' 2025-11-20 00:44:52,828 wheel INFO adding 'Bio/Entrez/DTDs/math.ent' 2025-11-20 00:44:52,828 wheel INFO adding 'Bio/Entrez/DTDs/mathml-in-pubmed.mod' 2025-11-20 00:44:52,828 wheel INFO adding 'Bio/Entrez/DTDs/mathml2-qname-1.mod' 2025-11-20 00:44:52,829 wheel INFO adding 'Bio/Entrez/DTDs/mathml2.dtd' 2025-11-20 00:44:52,829 wheel INFO adding 'Bio/Entrez/DTDs/mathml3-qname1.mod' 2025-11-20 00:44:52,829 wheel INFO adding 'Bio/Entrez/DTDs/mathml3.dtd' 2025-11-20 00:44:52,830 wheel INFO adding 'Bio/Entrez/DTDs/mathmlsetup.ent' 2025-11-20 00:44:52,830 wheel INFO adding 'Bio/Entrez/DTDs/mmlalias.ent' 2025-11-20 00:44:52,831 wheel INFO adding 'Bio/Entrez/DTDs/mmlextra.ent' 2025-11-20 00:44:52,831 wheel INFO adding 'Bio/Entrez/DTDs/modules.ent' 2025-11-20 00:44:52,831 wheel INFO adding 'Bio/Entrez/DTDs/nlm-articleset-2.0.dtd' 2025-11-20 00:44:52,832 wheel INFO adding 'Bio/Entrez/DTDs/nlmcatalogrecordset_170601.dtd' 2025-11-20 00:44:52,832 wheel INFO adding 'Bio/Entrez/DTDs/nlmcommon_011101.dtd' 2025-11-20 00:44:52,832 wheel INFO adding 'Bio/Entrez/DTDs/nlmcommon_080101.dtd' 2025-11-20 00:44:52,832 wheel INFO adding 'Bio/Entrez/DTDs/nlmcommon_090101.dtd' 2025-11-20 00:44:52,833 wheel INFO adding 'Bio/Entrez/DTDs/nlmmedline_011101.dtd' 2025-11-20 00:44:52,833 wheel INFO adding 'Bio/Entrez/DTDs/nlmmedline_080101.dtd' 2025-11-20 00:44:52,833 wheel INFO adding 'Bio/Entrez/DTDs/nlmmedline_090101.dtd' 2025-11-20 00:44:52,834 wheel INFO adding 'Bio/Entrez/DTDs/nlmmedlinecitation_011101.dtd' 2025-11-20 00:44:52,834 wheel INFO adding 'Bio/Entrez/DTDs/nlmmedlinecitation_080101.dtd' 2025-11-20 00:44:52,834 wheel INFO adding 'Bio/Entrez/DTDs/nlmmedlinecitation_090101.dtd' 2025-11-20 00:44:52,834 wheel INFO adding 'Bio/Entrez/DTDs/nlmmedlinecitationset_100101.dtd' 2025-11-20 00:44:52,835 wheel INFO adding 'Bio/Entrez/DTDs/nlmmedlinecitationset_100301.dtd' 2025-11-20 00:44:52,835 wheel INFO adding 'Bio/Entrez/DTDs/nlmmedlinecitationset_110101.dtd' 2025-11-20 00:44:52,835 wheel INFO adding 'Bio/Entrez/DTDs/nlmmedlinecitationset_120101.dtd' 2025-11-20 00:44:52,836 wheel INFO adding 'Bio/Entrez/DTDs/nlmmedlinecitationset_130101.dtd' 2025-11-20 00:44:52,836 wheel INFO adding 'Bio/Entrez/DTDs/nlmmedlinecitationset_130501.dtd' 2025-11-20 00:44:52,836 wheel INFO adding 'Bio/Entrez/DTDs/nlmmedlinecitationset_140101.dtd' 2025-11-20 00:44:52,836 wheel INFO adding 'Bio/Entrez/DTDs/nlmmedlinecitationset_150101.dtd' 2025-11-20 00:44:52,837 wheel INFO adding 'Bio/Entrez/DTDs/nlmserials_080101.dtd' 2025-11-20 00:44:52,837 wheel INFO adding 'Bio/Entrez/DTDs/nlmserials_100101.dtd' 2025-11-20 00:44:52,837 wheel INFO adding 'Bio/Entrez/DTDs/nlmsharedcatcit_080101.dtd' 2025-11-20 00:44:52,837 wheel INFO adding 'Bio/Entrez/DTDs/nlmsharedcatcit_090101.dtd' 2025-11-20 00:44:52,838 wheel INFO adding 'Bio/Entrez/DTDs/notat.ent' 2025-11-20 00:44:52,838 wheel INFO adding 'Bio/Entrez/DTDs/para.ent' 2025-11-20 00:44:52,838 wheel INFO adding 'Bio/Entrez/DTDs/phrase.ent' 2025-11-20 00:44:52,839 wheel INFO adding 'Bio/Entrez/DTDs/pmc-1.dtd' 2025-11-20 00:44:52,839 wheel INFO adding 'Bio/Entrez/DTDs/pubmed_020114.dtd' 2025-11-20 00:44:52,839 wheel INFO adding 'Bio/Entrez/DTDs/pubmed_080101.dtd' 2025-11-20 00:44:52,840 wheel INFO adding 'Bio/Entrez/DTDs/pubmed_090101.dtd' 2025-11-20 00:44:52,840 wheel INFO adding 'Bio/Entrez/DTDs/pubmed_100101.dtd' 2025-11-20 00:44:52,840 wheel INFO adding 'Bio/Entrez/DTDs/pubmed_100301.dtd' 2025-11-20 00:44:52,840 wheel INFO adding 'Bio/Entrez/DTDs/pubmed_110101.dtd' 2025-11-20 00:44:52,841 wheel INFO adding 'Bio/Entrez/DTDs/pubmed_120101.dtd' 2025-11-20 00:44:52,841 wheel INFO adding 'Bio/Entrez/DTDs/pubmed_130101.dtd' 2025-11-20 00:44:52,841 wheel INFO adding 'Bio/Entrez/DTDs/pubmed_130501.dtd' 2025-11-20 00:44:52,841 wheel INFO adding 'Bio/Entrez/DTDs/pubmed_140101.dtd' 2025-11-20 00:44:52,842 wheel INFO adding 'Bio/Entrez/DTDs/pubmed_150101.dtd' 2025-11-20 00:44:52,842 wheel INFO adding 'Bio/Entrez/DTDs/pubmed_180101.dtd' 2025-11-20 00:44:52,842 wheel INFO adding 'Bio/Entrez/DTDs/pubmed_180601.dtd' 2025-11-20 00:44:52,843 wheel INFO adding 'Bio/Entrez/DTDs/pubmed_190101.dtd' 2025-11-20 00:44:52,843 wheel INFO adding 'Bio/Entrez/DTDs/references.ent' 2025-11-20 00:44:52,843 wheel INFO adding 'Bio/Entrez/DTDs/section.ent' 2025-11-20 00:44:52,844 wheel INFO adding 'Bio/Entrez/DTDs/taxon.dtd' 2025-11-20 00:44:52,844 wheel INFO adding 'Bio/Entrez/DTDs/xhtml-inlstyle-1.mod' 2025-11-20 00:44:52,844 wheel INFO adding 'Bio/Entrez/DTDs/xhtml-table-1.mod' 2025-11-20 00:44:52,844 wheel INFO adding 'Bio/Entrez/DTDs/xmlspecchars.ent' 2025-11-20 00:44:52,845 wheel INFO adding 'Bio/Entrez/XSDs/IPGReportSet.xsd' 2025-11-20 00:44:52,845 wheel INFO adding 'Bio/Entrez/XSDs/NCBI_BlastOutput2.mod.xsd' 2025-11-20 00:44:52,845 wheel INFO adding 'Bio/Entrez/XSDs/NCBI_BlastOutput2.xsd' 2025-11-20 00:44:52,846 wheel INFO adding 'Bio/ExPASy/Enzyme.py' 2025-11-20 00:44:52,846 wheel INFO adding 'Bio/ExPASy/Prodoc.py' 2025-11-20 00:44:52,846 wheel INFO adding 'Bio/ExPASy/Prosite.py' 2025-11-20 00:44:52,846 wheel INFO adding 'Bio/ExPASy/ScanProsite.py' 2025-11-20 00:44:52,847 wheel INFO adding 'Bio/ExPASy/__init__.py' 2025-11-20 00:44:52,847 wheel INFO adding 'Bio/ExPASy/cellosaurus.py' 2025-11-20 00:44:52,847 wheel INFO adding 'Bio/GenBank/Record.py' 2025-11-20 00:44:52,848 wheel INFO adding 'Bio/GenBank/Scanner.py' 2025-11-20 00:44:52,848 wheel INFO adding 'Bio/GenBank/__init__.py' 2025-11-20 00:44:52,849 wheel INFO adding 'Bio/GenBank/utils.py' 2025-11-20 00:44:52,849 wheel INFO adding 'Bio/Geo/Record.py' 2025-11-20 00:44:52,849 wheel INFO adding 'Bio/Geo/__init__.py' 2025-11-20 00:44:52,850 wheel INFO adding 'Bio/Graphics/BasicChromosome.py' 2025-11-20 00:44:52,850 wheel INFO adding 'Bio/Graphics/ColorSpiral.py' 2025-11-20 00:44:52,850 wheel INFO adding 'Bio/Graphics/Comparative.py' 2025-11-20 00:44:52,850 wheel INFO adding 'Bio/Graphics/DisplayRepresentation.py' 2025-11-20 00:44:52,851 wheel INFO adding 'Bio/Graphics/Distribution.py' 2025-11-20 00:44:52,851 wheel INFO adding 'Bio/Graphics/KGML_vis.py' 2025-11-20 00:44:52,851 wheel INFO adding 'Bio/Graphics/__init__.py' 2025-11-20 00:44:52,852 wheel INFO adding 'Bio/Graphics/GenomeDiagram/_AbstractDrawer.py' 2025-11-20 00:44:52,852 wheel INFO adding 'Bio/Graphics/GenomeDiagram/_CircularDrawer.py' 2025-11-20 00:44:52,853 wheel INFO adding 'Bio/Graphics/GenomeDiagram/_Colors.py' 2025-11-20 00:44:52,853 wheel INFO adding 'Bio/Graphics/GenomeDiagram/_CrossLink.py' 2025-11-20 00:44:52,853 wheel INFO adding 'Bio/Graphics/GenomeDiagram/_Diagram.py' 2025-11-20 00:44:52,853 wheel INFO adding 'Bio/Graphics/GenomeDiagram/_Feature.py' 2025-11-20 00:44:52,854 wheel INFO adding 'Bio/Graphics/GenomeDiagram/_FeatureSet.py' 2025-11-20 00:44:52,854 wheel INFO adding 'Bio/Graphics/GenomeDiagram/_Graph.py' 2025-11-20 00:44:52,854 wheel INFO adding 'Bio/Graphics/GenomeDiagram/_GraphSet.py' 2025-11-20 00:44:52,855 wheel INFO adding 'Bio/Graphics/GenomeDiagram/_LinearDrawer.py' 2025-11-20 00:44:52,855 wheel INFO adding 'Bio/Graphics/GenomeDiagram/_Track.py' 2025-11-20 00:44:52,855 wheel INFO adding 'Bio/Graphics/GenomeDiagram/__init__.py' 2025-11-20 00:44:52,856 wheel INFO adding 'Bio/HMM/DynamicProgramming.py' 2025-11-20 00:44:52,856 wheel INFO adding 'Bio/HMM/MarkovModel.py' 2025-11-20 00:44:52,856 wheel INFO adding 'Bio/HMM/Trainer.py' 2025-11-20 00:44:52,857 wheel INFO adding 'Bio/HMM/Utilities.py' 2025-11-20 00:44:52,857 wheel INFO adding 'Bio/HMM/__init__.py' 2025-11-20 00:44:52,857 wheel INFO adding 'Bio/KEGG/REST.py' 2025-11-20 00:44:52,857 wheel INFO adding 'Bio/KEGG/__init__.py' 2025-11-20 00:44:52,858 wheel INFO adding 'Bio/KEGG/Compound/__init__.py' 2025-11-20 00:44:52,858 wheel INFO adding 'Bio/KEGG/Enzyme/__init__.py' 2025-11-20 00:44:52,858 wheel INFO adding 'Bio/KEGG/Gene/__init__.py' 2025-11-20 00:44:52,859 wheel INFO adding 'Bio/KEGG/KGML/KGML_parser.py' 2025-11-20 00:44:52,859 wheel INFO adding 'Bio/KEGG/KGML/KGML_pathway.py' 2025-11-20 00:44:52,859 wheel INFO adding 'Bio/KEGG/KGML/__init__.py' 2025-11-20 00:44:52,860 wheel INFO adding 'Bio/KEGG/Map/__init__.py' 2025-11-20 00:44:52,860 wheel INFO adding 'Bio/Medline/__init__.py' 2025-11-20 00:44:52,860 wheel INFO adding 'Bio/NMR/NOEtools.py' 2025-11-20 00:44:52,860 wheel INFO adding 'Bio/NMR/__init__.py' 2025-11-20 00:44:52,861 wheel INFO adding 'Bio/NMR/xpktools.py' 2025-11-20 00:44:52,861 wheel INFO adding 'Bio/Nexus/Nexus.py' 2025-11-20 00:44:52,862 wheel INFO adding 'Bio/Nexus/Nodes.py' 2025-11-20 00:44:52,862 wheel INFO adding 'Bio/Nexus/StandardData.py' 2025-11-20 00:44:52,862 wheel INFO adding 'Bio/Nexus/Trees.py' 2025-11-20 00:44:52,863 wheel INFO adding 'Bio/Nexus/__init__.py' 2025-11-20 00:44:52,863 wheel INFO adding 'Bio/Nexus/cnexus.c' 2025-11-20 00:44:52,863 wheel INFO adding 'Bio/Nexus/cnexus.cpython-312-powerpc64le-linux-musl.so' 2025-11-20 00:44:52,864 wheel INFO adding 'Bio/PDB/AbstractPropertyMap.py' 2025-11-20 00:44:52,864 wheel INFO adding 'Bio/PDB/Atom.py' 2025-11-20 00:44:52,864 wheel INFO adding 'Bio/PDB/Chain.py' 2025-11-20 00:44:52,865 wheel INFO adding 'Bio/PDB/DSSP.py' 2025-11-20 00:44:52,865 wheel INFO adding 'Bio/PDB/Dice.py' 2025-11-20 00:44:52,865 wheel INFO adding 'Bio/PDB/Entity.py' 2025-11-20 00:44:52,866 wheel INFO adding 'Bio/PDB/FragmentMapper.py' 2025-11-20 00:44:52,866 wheel INFO adding 'Bio/PDB/HSExposure.py' 2025-11-20 00:44:52,866 wheel INFO adding 'Bio/PDB/MMCIF2Dict.py' 2025-11-20 00:44:52,866 wheel INFO adding 'Bio/PDB/MMCIFParser.py' 2025-11-20 00:44:52,867 wheel INFO adding 'Bio/PDB/Model.py' 2025-11-20 00:44:52,867 wheel INFO adding 'Bio/PDB/NACCESS.py' 2025-11-20 00:44:52,867 wheel INFO adding 'Bio/PDB/NeighborSearch.py' 2025-11-20 00:44:52,868 wheel INFO adding 'Bio/PDB/PDBExceptions.py' 2025-11-20 00:44:52,868 wheel INFO adding 'Bio/PDB/PDBIO.py' 2025-11-20 00:44:52,868 wheel INFO adding 'Bio/PDB/PDBList.py' 2025-11-20 00:44:52,868 wheel INFO adding 'Bio/PDB/PDBMLParser.py' 2025-11-20 00:44:52,869 wheel INFO adding 'Bio/PDB/PDBParser.py' 2025-11-20 00:44:52,869 wheel INFO adding 'Bio/PDB/PICIO.py' 2025-11-20 00:44:52,870 wheel INFO adding 'Bio/PDB/PSEA.py' 2025-11-20 00:44:52,870 wheel INFO adding 'Bio/PDB/Polypeptide.py' 2025-11-20 00:44:52,870 wheel INFO adding 'Bio/PDB/Residue.py' 2025-11-20 00:44:52,870 wheel INFO adding 'Bio/PDB/ResidueDepth.py' 2025-11-20 00:44:52,871 wheel INFO adding 'Bio/PDB/SASA.py' 2025-11-20 00:44:52,871 wheel INFO adding 'Bio/PDB/SCADIO.py' 2025-11-20 00:44:52,871 wheel INFO adding 'Bio/PDB/Selection.py' 2025-11-20 00:44:52,872 wheel INFO adding 'Bio/PDB/Structure.py' 2025-11-20 00:44:52,872 wheel INFO adding 'Bio/PDB/StructureAlignment.py' 2025-11-20 00:44:52,872 wheel INFO adding 'Bio/PDB/StructureBuilder.py' 2025-11-20 00:44:52,872 wheel INFO adding 'Bio/PDB/Superimposer.py' 2025-11-20 00:44:52,873 wheel INFO adding 'Bio/PDB/__init__.py' 2025-11-20 00:44:52,873 wheel INFO adding 'Bio/PDB/_bcif_helper.cpython-312-powerpc64le-linux-musl.so' 2025-11-20 00:44:52,874 wheel INFO adding 'Bio/PDB/alphafold_db.py' 2025-11-20 00:44:52,874 wheel INFO adding 'Bio/PDB/bcifhelpermodule.c' 2025-11-20 00:44:52,874 wheel INFO adding 'Bio/PDB/binary_cif.py' 2025-11-20 00:44:52,874 wheel INFO adding 'Bio/PDB/ccealign.cpython-312-powerpc64le-linux-musl.so' 2025-11-20 00:44:52,875 wheel INFO adding 'Bio/PDB/ccealignmodule.c' 2025-11-20 00:44:52,875 wheel INFO adding 'Bio/PDB/cealign.py' 2025-11-20 00:44:52,876 wheel INFO adding 'Bio/PDB/ic_data.py' 2025-11-20 00:44:52,876 wheel INFO adding 'Bio/PDB/ic_rebuild.py' 2025-11-20 00:44:52,877 wheel INFO adding 'Bio/PDB/internal_coords.py' 2025-11-20 00:44:52,877 wheel INFO adding 'Bio/PDB/kdtrees.c' 2025-11-20 00:44:52,878 wheel INFO adding 'Bio/PDB/kdtrees.cpython-312-powerpc64le-linux-musl.so' 2025-11-20 00:44:52,878 wheel INFO adding 'Bio/PDB/mmcifio.py' 2025-11-20 00:44:52,879 wheel INFO adding 'Bio/PDB/parse_pdb_header.py' 2025-11-20 00:44:52,879 wheel INFO adding 'Bio/PDB/qcprot.py' 2025-11-20 00:44:52,879 wheel INFO adding 'Bio/PDB/vectors.py' 2025-11-20 00:44:52,880 wheel INFO adding 'Bio/PDB/mmtf/DefaultParser.py' 2025-11-20 00:44:52,880 wheel INFO adding 'Bio/PDB/mmtf/__init__.py' 2025-11-20 00:44:52,880 wheel INFO adding 'Bio/PDB/mmtf/mmtfio.py' 2025-11-20 00:44:52,881 wheel INFO adding 'Bio/Pathway/__init__.py' 2025-11-20 00:44:52,881 wheel INFO adding 'Bio/Pathway/Rep/Graph.py' 2025-11-20 00:44:52,881 wheel INFO adding 'Bio/Pathway/Rep/MultiGraph.py' 2025-11-20 00:44:52,881 wheel INFO adding 'Bio/Pathway/Rep/__init__.py' 2025-11-20 00:44:52,882 wheel INFO adding 'Bio/Phylo/BaseTree.py' 2025-11-20 00:44:52,882 wheel INFO adding 'Bio/Phylo/CDAO.py' 2025-11-20 00:44:52,882 wheel INFO adding 'Bio/Phylo/CDAOIO.py' 2025-11-20 00:44:52,883 wheel INFO adding 'Bio/Phylo/Consensus.py' 2025-11-20 00:44:52,883 wheel INFO adding 'Bio/Phylo/NeXML.py' 2025-11-20 00:44:52,883 wheel INFO adding 'Bio/Phylo/NeXMLIO.py' 2025-11-20 00:44:52,884 wheel INFO adding 'Bio/Phylo/Newick.py' 2025-11-20 00:44:52,884 wheel INFO adding 'Bio/Phylo/NewickIO.py' 2025-11-20 00:44:52,884 wheel INFO adding 'Bio/Phylo/NexusIO.py' 2025-11-20 00:44:52,885 wheel INFO adding 'Bio/Phylo/PhyloXML.py' 2025-11-20 00:44:52,885 wheel INFO adding 'Bio/Phylo/PhyloXMLIO.py' 2025-11-20 00:44:52,885 wheel INFO adding 'Bio/Phylo/TreeConstruction.py' 2025-11-20 00:44:52,886 wheel INFO adding 'Bio/Phylo/__init__.py' 2025-11-20 00:44:52,886 wheel INFO adding 'Bio/Phylo/_cdao_owl.py' 2025-11-20 00:44:52,887 wheel INFO adding 'Bio/Phylo/_io.py' 2025-11-20 00:44:52,887 wheel INFO adding 'Bio/Phylo/_utils.py' 2025-11-20 00:44:52,887 wheel INFO adding 'Bio/Phylo/Applications/_Fasttree.py' 2025-11-20 00:44:52,888 wheel INFO adding 'Bio/Phylo/Applications/_Phyml.py' 2025-11-20 00:44:52,888 wheel INFO adding 'Bio/Phylo/Applications/_Raxml.py' 2025-11-20 00:44:52,888 wheel INFO adding 'Bio/Phylo/Applications/__init__.py' 2025-11-20 00:44:52,889 wheel INFO adding 'Bio/Phylo/PAML/__init__.py' 2025-11-20 00:44:52,889 wheel INFO adding 'Bio/Phylo/PAML/_paml.py' 2025-11-20 00:44:52,889 wheel INFO adding 'Bio/Phylo/PAML/_parse_baseml.py' 2025-11-20 00:44:52,890 wheel INFO adding 'Bio/Phylo/PAML/_parse_codeml.py' 2025-11-20 00:44:52,890 wheel INFO adding 'Bio/Phylo/PAML/_parse_yn00.py' 2025-11-20 00:44:52,890 wheel INFO adding 'Bio/Phylo/PAML/baseml.py' 2025-11-20 00:44:52,890 wheel INFO adding 'Bio/Phylo/PAML/chi2.py' 2025-11-20 00:44:52,891 wheel INFO adding 'Bio/Phylo/PAML/codeml.py' 2025-11-20 00:44:52,891 wheel INFO adding 'Bio/Phylo/PAML/yn00.py' 2025-11-20 00:44:52,892 wheel INFO adding 'Bio/PopGen/__init__.py' 2025-11-20 00:44:52,892 wheel INFO adding 'Bio/PopGen/GenePop/Controller.py' 2025-11-20 00:44:52,892 wheel INFO adding 'Bio/PopGen/GenePop/EasyController.py' 2025-11-20 00:44:52,893 wheel INFO adding 'Bio/PopGen/GenePop/FileParser.py' 2025-11-20 00:44:52,893 wheel INFO adding 'Bio/PopGen/GenePop/LargeFileParser.py' 2025-11-20 00:44:52,893 wheel INFO adding 'Bio/PopGen/GenePop/__init__.py' 2025-11-20 00:44:52,893 wheel INFO adding 'Bio/Restriction/PrintFormat.py' 2025-11-20 00:44:52,894 wheel INFO adding 'Bio/Restriction/Restriction.py' 2025-11-20 00:44:52,895 wheel INFO adding 'Bio/Restriction/Restriction_Dictionary.py' 2025-11-20 00:44:52,897 wheel INFO adding 'Bio/Restriction/__init__.py' 2025-11-20 00:44:52,897 wheel INFO adding 'Bio/SCOP/Cla.py' 2025-11-20 00:44:52,897 wheel INFO adding 'Bio/SCOP/Des.py' 2025-11-20 00:44:52,898 wheel INFO adding 'Bio/SCOP/Dom.py' 2025-11-20 00:44:52,898 wheel INFO adding 'Bio/SCOP/Hie.py' 2025-11-20 00:44:52,898 wheel INFO adding 'Bio/SCOP/Raf.py' 2025-11-20 00:44:52,898 wheel INFO adding 'Bio/SCOP/Residues.py' 2025-11-20 00:44:52,899 wheel INFO adding 'Bio/SCOP/__init__.py' 2025-11-20 00:44:52,899 wheel INFO adding 'Bio/SVDSuperimposer/__init__.py' 2025-11-20 00:44:52,899 wheel INFO adding 'Bio/SearchIO/BlatIO.py' 2025-11-20 00:44:52,900 wheel INFO adding 'Bio/SearchIO/FastaIO.py' 2025-11-20 00:44:52,900 wheel INFO adding 'Bio/SearchIO/__init__.py' 2025-11-20 00:44:52,900 wheel INFO adding 'Bio/SearchIO/_index.py' 2025-11-20 00:44:52,901 wheel INFO adding 'Bio/SearchIO/_utils.py' 2025-11-20 00:44:52,901 wheel INFO adding 'Bio/SearchIO/BlastIO/__init__.py' 2025-11-20 00:44:52,901 wheel INFO adding 'Bio/SearchIO/BlastIO/blast_tab.py' 2025-11-20 00:44:52,902 wheel INFO adding 'Bio/SearchIO/BlastIO/blast_xml.py' 2025-11-20 00:44:52,902 wheel INFO adding 'Bio/SearchIO/ExonerateIO/__init__.py' 2025-11-20 00:44:52,903 wheel INFO adding 'Bio/SearchIO/ExonerateIO/_base.py' 2025-11-20 00:44:52,903 wheel INFO adding 'Bio/SearchIO/ExonerateIO/exonerate_cigar.py' 2025-11-20 00:44:52,903 wheel INFO adding 'Bio/SearchIO/ExonerateIO/exonerate_text.py' 2025-11-20 00:44:52,904 wheel INFO adding 'Bio/SearchIO/ExonerateIO/exonerate_vulgar.py' 2025-11-20 00:44:52,904 wheel INFO adding 'Bio/SearchIO/HHsuiteIO/__init__.py' 2025-11-20 00:44:52,904 wheel INFO adding 'Bio/SearchIO/HHsuiteIO/hhsuite2_text.py' 2025-11-20 00:44:52,904 wheel INFO adding 'Bio/SearchIO/HmmerIO/__init__.py' 2025-11-20 00:44:52,905 wheel INFO adding 'Bio/SearchIO/HmmerIO/_base.py' 2025-11-20 00:44:52,905 wheel INFO adding 'Bio/SearchIO/HmmerIO/hmmer2_text.py' 2025-11-20 00:44:52,905 wheel INFO adding 'Bio/SearchIO/HmmerIO/hmmer3_domtab.py' 2025-11-20 00:44:52,906 wheel INFO adding 'Bio/SearchIO/HmmerIO/hmmer3_tab.py' 2025-11-20 00:44:52,906 wheel INFO adding 'Bio/SearchIO/HmmerIO/hmmer3_text.py' 2025-11-20 00:44:52,906 wheel INFO adding 'Bio/SearchIO/InterproscanIO/__init__.py' 2025-11-20 00:44:52,907 wheel INFO adding 'Bio/SearchIO/InterproscanIO/interproscan_xml.py' 2025-11-20 00:44:52,907 wheel INFO adding 'Bio/SearchIO/_model/__init__.py' 2025-11-20 00:44:52,907 wheel INFO adding 'Bio/SearchIO/_model/_base.py' 2025-11-20 00:44:52,907 wheel INFO adding 'Bio/SearchIO/_model/hit.py' 2025-11-20 00:44:52,908 wheel INFO adding 'Bio/SearchIO/_model/hsp.py' 2025-11-20 00:44:52,908 wheel INFO adding 'Bio/SearchIO/_model/query.py' 2025-11-20 00:44:52,909 wheel INFO adding 'Bio/SeqIO/AbiIO.py' 2025-11-20 00:44:52,909 wheel INFO adding 'Bio/SeqIO/AceIO.py' 2025-11-20 00:44:52,909 wheel INFO adding 'Bio/SeqIO/FastaIO.py' 2025-11-20 00:44:52,910 wheel INFO adding 'Bio/SeqIO/GckIO.py' 2025-11-20 00:44:52,910 wheel INFO adding 'Bio/SeqIO/GfaIO.py' 2025-11-20 00:44:52,910 wheel INFO adding 'Bio/SeqIO/IgIO.py' 2025-11-20 00:44:52,910 wheel INFO adding 'Bio/SeqIO/InsdcIO.py' 2025-11-20 00:44:52,911 wheel INFO adding 'Bio/SeqIO/Interfaces.py' 2025-11-20 00:44:52,911 wheel INFO adding 'Bio/SeqIO/NibIO.py' 2025-11-20 00:44:52,912 wheel INFO adding 'Bio/SeqIO/PdbIO.py' 2025-11-20 00:44:52,912 wheel INFO adding 'Bio/SeqIO/PhdIO.py' 2025-11-20 00:44:52,912 wheel INFO adding 'Bio/SeqIO/PirIO.py' 2025-11-20 00:44:52,912 wheel INFO adding 'Bio/SeqIO/QualityIO.py' 2025-11-20 00:44:52,913 wheel INFO adding 'Bio/SeqIO/SeqXmlIO.py' 2025-11-20 00:44:52,913 wheel INFO adding 'Bio/SeqIO/SffIO.py' 2025-11-20 00:44:52,914 wheel INFO adding 'Bio/SeqIO/SnapGeneIO.py' 2025-11-20 00:44:52,914 wheel INFO adding 'Bio/SeqIO/SwissIO.py' 2025-11-20 00:44:52,914 wheel INFO adding 'Bio/SeqIO/TabIO.py' 2025-11-20 00:44:52,915 wheel INFO adding 'Bio/SeqIO/TwoBitIO.py' 2025-11-20 00:44:52,915 wheel INFO adding 'Bio/SeqIO/UniprotIO.py' 2025-11-20 00:44:52,915 wheel INFO adding 'Bio/SeqIO/XdnaIO.py' 2025-11-20 00:44:52,916 wheel INFO adding 'Bio/SeqIO/__init__.py' 2025-11-20 00:44:52,916 wheel INFO adding 'Bio/SeqIO/_index.py' 2025-11-20 00:44:52,916 wheel INFO adding 'Bio/SeqIO/_twoBitIO.c' 2025-11-20 00:44:52,917 wheel INFO adding 'Bio/SeqIO/_twoBitIO.cpython-312-powerpc64le-linux-musl.so' 2025-11-20 00:44:52,917 wheel INFO adding 'Bio/SeqUtils/CheckSum.py' 2025-11-20 00:44:52,918 wheel INFO adding 'Bio/SeqUtils/IsoelectricPoint.py' 2025-11-20 00:44:52,918 wheel INFO adding 'Bio/SeqUtils/MeltingTemp.py' 2025-11-20 00:44:52,918 wheel INFO adding 'Bio/SeqUtils/ProtParam.py' 2025-11-20 00:44:52,919 wheel INFO adding 'Bio/SeqUtils/ProtParamData.py' 2025-11-20 00:44:52,919 wheel INFO adding 'Bio/SeqUtils/__init__.py' 2025-11-20 00:44:52,919 wheel INFO adding 'Bio/SeqUtils/lcc.py' 2025-11-20 00:44:52,920 wheel INFO adding 'Bio/Sequencing/Ace.py' 2025-11-20 00:44:52,920 wheel INFO adding 'Bio/Sequencing/Phd.py' 2025-11-20 00:44:52,920 wheel INFO adding 'Bio/Sequencing/__init__.py' 2025-11-20 00:44:52,921 wheel INFO adding 'Bio/Sequencing/Applications/_Novoalign.py' 2025-11-20 00:44:52,921 wheel INFO adding 'Bio/Sequencing/Applications/__init__.py' 2025-11-20 00:44:52,921 wheel INFO adding 'Bio/Sequencing/Applications/_bwa.py' 2025-11-20 00:44:52,922 wheel INFO adding 'Bio/Sequencing/Applications/_samtools.py' 2025-11-20 00:44:52,922 wheel INFO adding 'Bio/SwissProt/KeyWList.py' 2025-11-20 00:44:52,922 wheel INFO adding 'Bio/SwissProt/__init__.py' 2025-11-20 00:44:52,923 wheel INFO adding 'Bio/TogoWS/__init__.py' 2025-11-20 00:44:52,923 wheel INFO adding 'Bio/UniGene/__init__.py' 2025-11-20 00:44:52,923 wheel INFO adding 'Bio/UniProt/GOA.py' 2025-11-20 00:44:52,924 wheel INFO adding 'Bio/UniProt/__init__.py' 2025-11-20 00:44:52,924 wheel INFO adding 'Bio/codonalign/__init__.py' 2025-11-20 00:44:52,924 wheel INFO adding 'Bio/codonalign/codonalignment.py' 2025-11-20 00:44:52,925 wheel INFO adding 'Bio/codonalign/codonseq.py' 2025-11-20 00:44:52,925 wheel INFO adding 'Bio/motifs/__init__.py' 2025-11-20 00:44:52,925 wheel INFO adding 'Bio/motifs/_pwm.c' 2025-11-20 00:44:52,926 wheel INFO adding 'Bio/motifs/_pwm.cpython-312-powerpc64le-linux-musl.so' 2025-11-20 00:44:52,926 wheel INFO adding 'Bio/motifs/alignace.py' 2025-11-20 00:44:52,926 wheel INFO adding 'Bio/motifs/clusterbuster.py' 2025-11-20 00:44:52,927 wheel INFO adding 'Bio/motifs/mast.py' 2025-11-20 00:44:52,927 wheel INFO adding 'Bio/motifs/matrix.py' 2025-11-20 00:44:52,927 wheel INFO adding 'Bio/motifs/meme.py' 2025-11-20 00:44:52,928 wheel INFO adding 'Bio/motifs/minimal.py' 2025-11-20 00:44:52,928 wheel INFO adding 'Bio/motifs/pfm.py' 2025-11-20 00:44:52,928 wheel INFO adding 'Bio/motifs/thresholds.py' 2025-11-20 00:44:52,929 wheel INFO adding 'Bio/motifs/transfac.py' 2025-11-20 00:44:52,929 wheel INFO adding 'Bio/motifs/xms.py' 2025-11-20 00:44:52,929 wheel INFO adding 'Bio/motifs/applications/__init__.py' 2025-11-20 00:44:52,929 wheel INFO adding 'Bio/motifs/applications/_xxmotif.py' 2025-11-20 00:44:52,930 wheel INFO adding 'Bio/motifs/jaspar/__init__.py' 2025-11-20 00:44:52,930 wheel INFO adding 'Bio/motifs/jaspar/db.py' 2025-11-20 00:44:52,930 wheel INFO adding 'Bio/phenotype/__init__.py' 2025-11-20 00:44:52,931 wheel INFO adding 'Bio/phenotype/phen_micro.py' 2025-11-20 00:44:52,931 wheel INFO adding 'Bio/phenotype/pm_fitting.py' 2025-11-20 00:44:52,931 wheel INFO adding 'BioSQL/BioSeq.py' 2025-11-20 00:44:52,932 wheel INFO adding 'BioSQL/BioSeqDatabase.py' 2025-11-20 00:44:52,932 wheel INFO adding 'BioSQL/DBUtils.py' 2025-11-20 00:44:52,932 wheel INFO adding 'BioSQL/Loader.py' 2025-11-20 00:44:52,933 wheel INFO adding 'BioSQL/__init__.py' 2025-11-20 00:44:52,933 wheel INFO adding 'BioSQL/py.typed' 2025-11-20 00:44:52,934 wheel INFO adding 'biopython-1.85.dist-info/licenses/LICENSE' 2025-11-20 00:44:52,934 wheel INFO adding 'biopython-1.85.dist-info/licenses/LICENSE.rst' 2025-11-20 00:44:52,934 wheel INFO adding 'biopython-1.85.dist-info/METADATA' 2025-11-20 00:44:52,934 wheel INFO adding 'biopython-1.85.dist-info/WHEEL' 2025-11-20 00:44:52,934 wheel INFO adding 'biopython-1.85.dist-info/top_level.txt' 2025-11-20 00:44:52,938 wheel INFO adding 'biopython-1.85.dist-info/RECORD' 2025-11-20 00:44:52,945 root INFO removing build/bdist.linux-ppc64le/wheel 2025-11-20 00:44:52,971 gpep517 INFO The backend produced .dist/biopython-1.85-cp312-cp312-linux_ppc64le.whl biopython-1.85-cp312-cp312-linux_ppc64le.whl >>> py3-biopython: Entering fakeroot... >>> py3-biopython-pyc*: Running split function pyc... 'usr/lib/python3.12/site-packages/BioSQL/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/BioSQL/__pycache__' 'usr/lib/python3.12/site-packages/Bio/Pathway/Rep/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Pathway/Rep/__pycache__' 'usr/lib/python3.12/site-packages/Bio/Pathway/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Pathway/__pycache__' 'usr/lib/python3.12/site-packages/Bio/codonalign/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/codonalign/__pycache__' 'usr/lib/python3.12/site-packages/Bio/Nexus/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Nexus/__pycache__' 'usr/lib/python3.12/site-packages/Bio/phenotype/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/phenotype/__pycache__' 'usr/lib/python3.12/site-packages/Bio/Align/Applications/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Align/Applications/__pycache__' 'usr/lib/python3.12/site-packages/Bio/Align/substitution_matrices/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Align/substitution_matrices/__pycache__' 'usr/lib/python3.12/site-packages/Bio/Align/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Align/__pycache__' 'usr/lib/python3.12/site-packages/Bio/SearchIO/HmmerIO/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/SearchIO/HmmerIO/__pycache__' 'usr/lib/python3.12/site-packages/Bio/SearchIO/HHsuiteIO/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/SearchIO/HHsuiteIO/__pycache__' 'usr/lib/python3.12/site-packages/Bio/SearchIO/InterproscanIO/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/SearchIO/InterproscanIO/__pycache__' 'usr/lib/python3.12/site-packages/Bio/SearchIO/_model/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/SearchIO/_model/__pycache__' 'usr/lib/python3.12/site-packages/Bio/SearchIO/BlastIO/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/SearchIO/BlastIO/__pycache__' 'usr/lib/python3.12/site-packages/Bio/SearchIO/ExonerateIO/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/SearchIO/ExonerateIO/__pycache__' 'usr/lib/python3.12/site-packages/Bio/SearchIO/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/SearchIO/__pycache__' 'usr/lib/python3.12/site-packages/Bio/UniProt/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/UniProt/__pycache__' 'usr/lib/python3.12/site-packages/Bio/Compass/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Compass/__pycache__' 'usr/lib/python3.12/site-packages/Bio/ExPASy/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/ExPASy/__pycache__' 'usr/lib/python3.12/site-packages/Bio/Emboss/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Emboss/__pycache__' 'usr/lib/python3.12/site-packages/Bio/motifs/jaspar/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/motifs/jaspar/__pycache__' 'usr/lib/python3.12/site-packages/Bio/motifs/applications/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/motifs/applications/__pycache__' 'usr/lib/python3.12/site-packages/Bio/motifs/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/motifs/__pycache__' 'usr/lib/python3.12/site-packages/Bio/Medline/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Medline/__pycache__' 'usr/lib/python3.12/site-packages/Bio/Application/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Application/__pycache__' 'usr/lib/python3.12/site-packages/Bio/Geo/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Geo/__pycache__' 'usr/lib/python3.12/site-packages/Bio/HMM/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/HMM/__pycache__' 'usr/lib/python3.12/site-packages/Bio/GenBank/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/GenBank/__pycache__' 'usr/lib/python3.12/site-packages/Bio/AlignIO/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/AlignIO/__pycache__' 'usr/lib/python3.12/site-packages/Bio/SCOP/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/SCOP/__pycache__' 'usr/lib/python3.12/site-packages/Bio/Blast/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Blast/__pycache__' 'usr/lib/python3.12/site-packages/Bio/Cluster/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Cluster/__pycache__' 'usr/lib/python3.12/site-packages/Bio/PDB/mmtf/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/PDB/mmtf/__pycache__' 'usr/lib/python3.12/site-packages/Bio/PDB/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/PDB/__pycache__' 'usr/lib/python3.12/site-packages/Bio/Alphabet/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Alphabet/__pycache__' 'usr/lib/python3.12/site-packages/Bio/NMR/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/NMR/__pycache__' 'usr/lib/python3.12/site-packages/Bio/Entrez/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Entrez/__pycache__' 'usr/lib/python3.12/site-packages/Bio/SeqUtils/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/SeqUtils/__pycache__' 'usr/lib/python3.12/site-packages/Bio/Data/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Data/__pycache__' 'usr/lib/python3.12/site-packages/Bio/KEGG/Map/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/KEGG/Map/__pycache__' 'usr/lib/python3.12/site-packages/Bio/KEGG/KGML/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/KEGG/KGML/__pycache__' 'usr/lib/python3.12/site-packages/Bio/KEGG/Gene/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/KEGG/Gene/__pycache__' 'usr/lib/python3.12/site-packages/Bio/KEGG/Enzyme/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/KEGG/Enzyme/__pycache__' 'usr/lib/python3.12/site-packages/Bio/KEGG/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/KEGG/__pycache__' 'usr/lib/python3.12/site-packages/Bio/KEGG/Compound/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/KEGG/Compound/__pycache__' 'usr/lib/python3.12/site-packages/Bio/UniGene/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/UniGene/__pycache__' 'usr/lib/python3.12/site-packages/Bio/Graphics/GenomeDiagram/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Graphics/GenomeDiagram/__pycache__' 'usr/lib/python3.12/site-packages/Bio/Graphics/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Graphics/__pycache__' 'usr/lib/python3.12/site-packages/Bio/TogoWS/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/TogoWS/__pycache__' 'usr/lib/python3.12/site-packages/Bio/Affy/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Affy/__pycache__' 'usr/lib/python3.12/site-packages/Bio/CAPS/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/CAPS/__pycache__' 'usr/lib/python3.12/site-packages/Bio/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/__pycache__' 'usr/lib/python3.12/site-packages/Bio/Sequencing/Applications/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Sequencing/Applications/__pycache__' 'usr/lib/python3.12/site-packages/Bio/Sequencing/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Sequencing/__pycache__' 'usr/lib/python3.12/site-packages/Bio/Restriction/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Restriction/__pycache__' 'usr/lib/python3.12/site-packages/Bio/SVDSuperimposer/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/SVDSuperimposer/__pycache__' 'usr/lib/python3.12/site-packages/Bio/SwissProt/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/SwissProt/__pycache__' 'usr/lib/python3.12/site-packages/Bio/Phylo/Applications/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Phylo/Applications/__pycache__' 'usr/lib/python3.12/site-packages/Bio/Phylo/PAML/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Phylo/PAML/__pycache__' 'usr/lib/python3.12/site-packages/Bio/Phylo/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Phylo/__pycache__' 'usr/lib/python3.12/site-packages/Bio/PopGen/GenePop/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/PopGen/GenePop/__pycache__' 'usr/lib/python3.12/site-packages/Bio/PopGen/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/PopGen/__pycache__' 'usr/lib/python3.12/site-packages/Bio/SeqIO/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/SeqIO/__pycache__' >>> py3-biopython-pyc*: Preparing subpackage py3-biopython-pyc... >>> py3-biopython-pyc*: Running postcheck for py3-biopython-pyc >>> py3-biopython*: Running postcheck for py3-biopython >>> py3-biopython*: Preparing package py3-biopython... >>> py3-biopython*: Stripping binaries >>> py3-biopython*: Scanning shared objects >>> py3-biopython-pyc*: Tracing dependencies... python3~3.12 >>> py3-biopython-pyc*: Package size: 6.4 MB >>> py3-biopython-pyc*: Compressing data... >>> py3-biopython-pyc*: Create checksum... >>> py3-biopython-pyc*: Create py3-biopython-pyc-1.85-r0.apk >>> py3-biopython*: Tracing dependencies... py3-numpy python3 python3~3.12 so:libc.musl-ppc64le.so.1 >>> py3-biopython*: Package size: 11.7 MB >>> py3-biopython*: Compressing data... >>> py3-biopython*: Create checksum... >>> py3-biopython*: Create py3-biopython-1.85-r0.apk >>> py3-biopython: Build complete at Thu, 20 Nov 2025 00:44:57 +0000 elapsed time 0h 0m 47s >>> py3-biopython: Cleaning up srcdir >>> py3-biopython: Cleaning up pkgdir >>> py3-biopython: Uninstalling dependencies... ( 1/28) Purging .makedepends-py3-biopython (20251120.004430) ( 2/28) Purging py3-gpep517-pyc (19-r1) ( 3/28) Purging py3-gpep517 (19-r1) ( 4/28) Purging py3-installer-pyc (0.7.0-r2) ( 5/28) Purging py3-installer (0.7.0-r2) ( 6/28) Purging py3-setuptools-pyc (80.9.0-r2) ( 7/28) Purging py3-setuptools (80.9.0-r2) ( 8/28) Purging py3-wheel-pyc (0.46.1-r0) ( 9/28) Purging py3-wheel (0.46.1-r0) (10/28) Purging py3-packaging-pyc (25.0-r0) (11/28) Purging py3-packaging (25.0-r0) (12/28) Purging py3-parsing-pyc (3.2.3-r0) (13/28) Purging py3-parsing (3.2.3-r0) (14/28) Purging py3-numpy-dev (2.3.5-r0) (15/28) Purging py3-numpy-tests (2.3.5-r0) (16/28) Purging py3-numpy-pyc (2.3.5-r0) (17/28) Purging py3-numpy (2.3.5-r0) (18/28) Purging openblas (0.3.30-r0) (19/28) Purging python3-dev (3.12.12-r0) (20/28) Purging python3-pyc (3.12.12-r0) (21/28) Purging python3-pycache-pyc0 (3.12.12-r0) (22/28) Purging pyc (3.12.12-r0) (23/28) Purging python3 (3.12.12-r0) (24/28) Purging gdbm (1.26-r0) (25/28) Purging libgfortran (15.2.0-r2) (26/28) Purging libpanelw (6.5_p20251115-r0) (27/28) Purging mpdecimal (4.0.1-r0) (28/28) Purging xz-libs (5.8.1-r0) busybox-1.37.0-r26.trigger: Executing script... OK: 579 MiB in 151 packages >>> py3-biopython: Updating the community/ppc64le repository index... >>> py3-biopython: Signing the index...