>>> py3-biopython: Building community/py3-biopython 1.85-r0 (using abuild 3.16.0_rc4-r0) started Thu, 23 Oct 2025 12:06:53 +0000
>>> py3-biopython: Validating /home/buildozer/aports/community/py3-biopython/APKBUILD...
>>> WARNING: py3-biopython: No maintainer
>>> py3-biopython: Analyzing dependencies...
>>> py3-biopython: Installing for build: build-base py3-numpy python3 py3-gpep517 py3-setuptools py3-wheel py3-numpy-dev python3-dev
( 1/30) Installing libbz2 (1.0.8-r6)
( 2/30) Installing libffi (3.5.2-r0)
( 3/30) Installing gdbm (1.26-r0)
( 4/30) Installing xz-libs (5.8.1-r0)
( 5/30) Installing mpdecimal (4.0.1-r0)
( 6/30) Installing libpanelw (6.5_p20251010-r0)
( 7/30) Installing sqlite-libs (3.50.4-r1)
( 8/30) Installing python3 (3.12.12-r0)
( 9/30) Installing python3-pycache-pyc0 (3.12.12-r0)
(10/30) Installing pyc (3.12.12-r0)
(11/30) Installing py3-numpy-pyc (2.3.4-r0)
(12/30) Installing python3-pyc (3.12.12-r0)
(13/30) Installing openblas (0.3.30-r0)
(14/30) Installing py3-numpy (2.3.4-r0)
(15/30) Installing py3-numpy-tests (2.3.4-r0)
(16/30) Installing py3-installer (0.7.0-r2)
(17/30) Installing py3-installer-pyc (0.7.0-r2)
(18/30) Installing py3-gpep517 (19-r0)
(19/30) Installing py3-gpep517-pyc (19-r0)
(20/30) Installing py3-parsing (3.2.3-r0)
(21/30) Installing py3-parsing-pyc (3.2.3-r0)
(22/30) Installing py3-packaging (25.0-r0)
(23/30) Installing py3-packaging-pyc (25.0-r0)
(24/30) Installing py3-setuptools (80.9.0-r1)
(25/30) Installing py3-setuptools-pyc (80.9.0-r1)
(26/30) Installing py3-wheel (0.46.1-r0)
(27/30) Installing py3-wheel-pyc (0.46.1-r0)
(28/30) Installing py3-numpy-dev (2.3.4-r0)
(29/30) Installing python3-dev (3.12.12-r0)
(30/30) Installing .makedepends-py3-biopython (20251023.120740)
busybox-1.37.0-r24.trigger: Executing script...
OK: 945 MiB in 135 packages
>>> py3-biopython: Cleaning up srcdir
>>> py3-biopython: Cleaning up pkgdir
>>> py3-biopython: Cleaning up tmpdir
>>> py3-biopython: Fetching https://distfiles.alpinelinux.org/distfiles/v3.23/biopython-1.85.tar.gz
Connecting to distfiles.alpinelinux.org (172.105.82.32:443)
wget: server returned error: HTTP/1.1 404 Not Found
>>> py3-biopython: Fetching https://files.pythonhosted.org/packages/source/b/biopython/biopython-1.85.tar.gz
Connecting to files.pythonhosted.org (151.101.0.223:443)
Connecting to files.pythonhosted.org (151.101.0.223:443)
saving to '/var/cache/distfiles/v3.23/biopython-1.85.tar.gz.part'
biopython-1.85.tar.g   5% |*                               | 1024k  0:00:17 ETA
biopython-1.85.tar.g  52% |****************                | 10.0M  0:00:01 ETA
biopython-1.85.tar.g 100% |********************************| 18.9M  0:00:00 ETA
'/var/cache/distfiles/v3.23/biopython-1.85.tar.gz.part' saved
/var/cache/distfiles/v3.23/biopython-1.85.tar.gz: OK
>>> py3-biopython: Fetching https://distfiles.alpinelinux.org/distfiles/v3.23/biopython-1.85.tar.gz
/var/cache/distfiles/v3.23/biopython-1.85.tar.gz: OK
>>> py3-biopython: Unpacking /var/cache/distfiles/v3.23/biopython-1.85.tar.gz...
2025-10-23 12:07:55,085 gpep517 INFO Building wheel via backend setuptools.build_meta:__legacy__
/usr/lib/python3.12/site-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated.
!!

        ********************************************************************************
        Please consider removing the following classifiers in favor of a SPDX license expression:

        License :: Freely Distributable

        See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
        ********************************************************************************

!!
  self._finalize_license_expression()
2025-10-23 12:07:55,282 root INFO running bdist_wheel
2025-10-23 12:07:55,484 root INFO running build
2025-10-23 12:07:55,487 root INFO running build_py
2025-10-23 12:07:55,525 root INFO creating build/lib.linux-riscv64-cpython-312/Bio
2025-10-23 12:07:55,529 root INFO copying Bio/MaxEntropy.py -> build/lib.linux-riscv64-cpython-312/Bio
2025-10-23 12:07:55,532 root INFO copying Bio/SeqRecord.py -> build/lib.linux-riscv64-cpython-312/Bio
2025-10-23 12:07:55,536 root INFO copying Bio/Seq.py -> build/lib.linux-riscv64-cpython-312/Bio
2025-10-23 12:07:55,541 root INFO copying Bio/bgzf.py -> build/lib.linux-riscv64-cpython-312/Bio
2025-10-23 12:07:55,544 root INFO copying Bio/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio
2025-10-23 12:07:55,546 root INFO copying Bio/SeqFeature.py -> build/lib.linux-riscv64-cpython-312/Bio
2025-10-23 12:07:55,550 root INFO copying Bio/NaiveBayes.py -> build/lib.linux-riscv64-cpython-312/Bio
2025-10-23 12:07:55,552 root INFO copying Bio/kNN.py -> build/lib.linux-riscv64-cpython-312/Bio
2025-10-23 12:07:55,555 root INFO copying Bio/File.py -> build/lib.linux-riscv64-cpython-312/Bio
2025-10-23 12:07:55,557 root INFO copying Bio/MarkovModel.py -> build/lib.linux-riscv64-cpython-312/Bio
2025-10-23 12:07:55,560 root INFO copying Bio/LogisticRegression.py -> build/lib.linux-riscv64-cpython-312/Bio
2025-10-23 12:07:55,562 root INFO copying Bio/_utils.py -> build/lib.linux-riscv64-cpython-312/Bio
2025-10-23 12:07:55,564 root INFO copying Bio/pairwise2.py -> build/lib.linux-riscv64-cpython-312/Bio
2025-10-23 12:07:55,567 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/Affy
2025-10-23 12:07:55,569 root INFO copying Bio/Affy/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/Affy
2025-10-23 12:07:55,571 root INFO copying Bio/Affy/CelFile.py -> build/lib.linux-riscv64-cpython-312/Bio/Affy
2025-10-23 12:07:55,575 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/Align
2025-10-23 12:07:55,577 root INFO copying Bio/Align/exonerate.py -> build/lib.linux-riscv64-cpython-312/Bio/Align
2025-10-23 12:07:55,579 root INFO copying Bio/Align/bigbed.py -> build/lib.linux-riscv64-cpython-312/Bio/Align
2025-10-23 12:07:55,582 root INFO copying Bio/Align/hhr.py -> build/lib.linux-riscv64-cpython-312/Bio/Align
2025-10-23 12:07:55,584 root INFO copying Bio/Align/chain.py -> build/lib.linux-riscv64-cpython-312/Bio/Align
2025-10-23 12:07:55,586 root INFO copying Bio/Align/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/Align
2025-10-23 12:07:55,590 root INFO copying Bio/Align/phylip.py -> build/lib.linux-riscv64-cpython-312/Bio/Align
2025-10-23 12:07:55,592 root INFO copying Bio/Align/bed.py -> build/lib.linux-riscv64-cpython-312/Bio/Align
2025-10-23 12:07:55,595 root INFO copying Bio/Align/AlignInfo.py -> build/lib.linux-riscv64-cpython-312/Bio/Align
2025-10-23 12:07:55,597 root INFO copying Bio/Align/bigpsl.py -> build/lib.linux-riscv64-cpython-312/Bio/Align
2025-10-23 12:07:55,599 root INFO copying Bio/Align/interfaces.py -> build/lib.linux-riscv64-cpython-312/Bio/Align
2025-10-23 12:07:55,602 root INFO copying Bio/Align/emboss.py -> build/lib.linux-riscv64-cpython-312/Bio/Align
2025-10-23 12:07:55,604 root INFO copying Bio/Align/analysis.py -> build/lib.linux-riscv64-cpython-312/Bio/Align
2025-10-23 12:07:55,606 root INFO copying Bio/Align/bigmaf.py -> build/lib.linux-riscv64-cpython-312/Bio/Align
2025-10-23 12:07:55,609 root INFO copying Bio/Align/stockholm.py -> build/lib.linux-riscv64-cpython-312/Bio/Align
2025-10-23 12:07:55,611 root INFO copying Bio/Align/clustal.py -> build/lib.linux-riscv64-cpython-312/Bio/Align
2025-10-23 12:07:55,613 root INFO copying Bio/Align/fasta.py -> build/lib.linux-riscv64-cpython-312/Bio/Align
2025-10-23 12:07:55,616 root INFO copying Bio/Align/maf.py -> build/lib.linux-riscv64-cpython-312/Bio/Align
2025-10-23 12:07:55,618 root INFO copying Bio/Align/nexus.py -> build/lib.linux-riscv64-cpython-312/Bio/Align
2025-10-23 12:07:55,620 root INFO copying Bio/Align/mauve.py -> build/lib.linux-riscv64-cpython-312/Bio/Align
2025-10-23 12:07:55,623 root INFO copying Bio/Align/sam.py -> build/lib.linux-riscv64-cpython-312/Bio/Align
2025-10-23 12:07:55,625 root INFO copying Bio/Align/psl.py -> build/lib.linux-riscv64-cpython-312/Bio/Align
2025-10-23 12:07:55,628 root INFO copying Bio/Align/a2m.py -> build/lib.linux-riscv64-cpython-312/Bio/Align
2025-10-23 12:07:55,630 root INFO copying Bio/Align/tabular.py -> build/lib.linux-riscv64-cpython-312/Bio/Align
2025-10-23 12:07:55,633 root INFO copying Bio/Align/msf.py -> build/lib.linux-riscv64-cpython-312/Bio/Align
2025-10-23 12:07:55,636 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/Align/Applications
2025-10-23 12:07:55,637 root INFO copying Bio/Align/Applications/_Probcons.py -> build/lib.linux-riscv64-cpython-312/Bio/Align/Applications
2025-10-23 12:07:55,640 root INFO copying Bio/Align/Applications/_Muscle.py -> build/lib.linux-riscv64-cpython-312/Bio/Align/Applications
2025-10-23 12:07:55,642 root INFO copying Bio/Align/Applications/_MSAProbs.py -> build/lib.linux-riscv64-cpython-312/Bio/Align/Applications
2025-10-23 12:07:55,645 root INFO copying Bio/Align/Applications/_ClustalOmega.py -> build/lib.linux-riscv64-cpython-312/Bio/Align/Applications
2025-10-23 12:07:55,647 root INFO copying Bio/Align/Applications/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/Align/Applications
2025-10-23 12:07:55,649 root INFO copying Bio/Align/Applications/_Clustalw.py -> build/lib.linux-riscv64-cpython-312/Bio/Align/Applications
2025-10-23 12:07:55,651 root INFO copying Bio/Align/Applications/_Prank.py -> build/lib.linux-riscv64-cpython-312/Bio/Align/Applications
2025-10-23 12:07:55,654 root INFO copying Bio/Align/Applications/_Mafft.py -> build/lib.linux-riscv64-cpython-312/Bio/Align/Applications
2025-10-23 12:07:55,656 root INFO copying Bio/Align/Applications/_TCoffee.py -> build/lib.linux-riscv64-cpython-312/Bio/Align/Applications
2025-10-23 12:07:55,659 root INFO copying Bio/Align/Applications/_Dialign.py -> build/lib.linux-riscv64-cpython-312/Bio/Align/Applications
2025-10-23 12:07:55,662 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices
2025-10-23 12:07:55,663 root INFO copying Bio/Align/substitution_matrices/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices
2025-10-23 12:07:55,667 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/AlignIO
2025-10-23 12:07:55,668 root INFO copying Bio/AlignIO/Interfaces.py -> build/lib.linux-riscv64-cpython-312/Bio/AlignIO
2025-10-23 12:07:55,671 root INFO copying Bio/AlignIO/MauveIO.py -> build/lib.linux-riscv64-cpython-312/Bio/AlignIO
2025-10-23 12:07:55,673 root INFO copying Bio/AlignIO/PhylipIO.py -> build/lib.linux-riscv64-cpython-312/Bio/AlignIO
2025-10-23 12:07:55,675 root INFO copying Bio/AlignIO/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/AlignIO
2025-10-23 12:07:55,678 root INFO copying Bio/AlignIO/MsfIO.py -> build/lib.linux-riscv64-cpython-312/Bio/AlignIO
2025-10-23 12:07:55,680 root INFO copying Bio/AlignIO/StockholmIO.py -> build/lib.linux-riscv64-cpython-312/Bio/AlignIO
2025-10-23 12:07:55,683 root INFO copying Bio/AlignIO/MafIO.py -> build/lib.linux-riscv64-cpython-312/Bio/AlignIO
2025-10-23 12:07:55,686 root INFO copying Bio/AlignIO/EmbossIO.py -> build/lib.linux-riscv64-cpython-312/Bio/AlignIO
2025-10-23 12:07:55,688 root INFO copying Bio/AlignIO/NexusIO.py -> build/lib.linux-riscv64-cpython-312/Bio/AlignIO
2025-10-23 12:07:55,691 root INFO copying Bio/AlignIO/FastaIO.py -> build/lib.linux-riscv64-cpython-312/Bio/AlignIO
2025-10-23 12:07:55,693 root INFO copying Bio/AlignIO/ClustalIO.py -> build/lib.linux-riscv64-cpython-312/Bio/AlignIO
2025-10-23 12:07:55,696 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/Alphabet
2025-10-23 12:07:55,697 root INFO copying Bio/Alphabet/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/Alphabet
2025-10-23 12:07:55,700 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/Application
2025-10-23 12:07:55,701 root INFO copying Bio/Application/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/Application
2025-10-23 12:07:55,704 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/Blast
2025-10-23 12:07:55,705 root INFO copying Bio/Blast/NCBIWWW.py -> build/lib.linux-riscv64-cpython-312/Bio/Blast
2025-10-23 12:07:55,708 root INFO copying Bio/Blast/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/Blast
2025-10-23 12:07:55,711 root INFO copying Bio/Blast/_parser.py -> build/lib.linux-riscv64-cpython-312/Bio/Blast
2025-10-23 12:07:55,714 root INFO copying Bio/Blast/Applications.py -> build/lib.linux-riscv64-cpython-312/Bio/Blast
2025-10-23 12:07:55,717 root INFO copying Bio/Blast/_writers.py -> build/lib.linux-riscv64-cpython-312/Bio/Blast
2025-10-23 12:07:55,719 root INFO copying Bio/Blast/NCBIXML.py -> build/lib.linux-riscv64-cpython-312/Bio/Blast
2025-10-23 12:07:55,723 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/CAPS
2025-10-23 12:07:55,724 root INFO copying Bio/CAPS/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/CAPS
2025-10-23 12:07:55,727 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/Cluster
2025-10-23 12:07:55,728 root INFO copying Bio/Cluster/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/Cluster
2025-10-23 12:07:55,732 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/codonalign
2025-10-23 12:07:55,733 root INFO copying Bio/codonalign/codonalignment.py -> build/lib.linux-riscv64-cpython-312/Bio/codonalign
2025-10-23 12:07:55,736 root INFO copying Bio/codonalign/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/codonalign
2025-10-23 12:07:55,738 root INFO copying Bio/codonalign/codonseq.py -> build/lib.linux-riscv64-cpython-312/Bio/codonalign
2025-10-23 12:07:55,741 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/Compass
2025-10-23 12:07:55,743 root INFO copying Bio/Compass/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/Compass
2025-10-23 12:07:55,746 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/Data
2025-10-23 12:07:55,747 root INFO copying Bio/Data/CodonTable.py -> build/lib.linux-riscv64-cpython-312/Bio/Data
2025-10-23 12:07:55,750 root INFO copying Bio/Data/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/Data
2025-10-23 12:07:55,752 root INFO copying Bio/Data/PDBData.py -> build/lib.linux-riscv64-cpython-312/Bio/Data
2025-10-23 12:07:55,755 root INFO copying Bio/Data/IUPACData.py -> build/lib.linux-riscv64-cpython-312/Bio/Data
2025-10-23 12:07:55,758 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/Emboss
2025-10-23 12:07:55,760 root INFO copying Bio/Emboss/PrimerSearch.py -> build/lib.linux-riscv64-cpython-312/Bio/Emboss
2025-10-23 12:07:55,762 root INFO copying Bio/Emboss/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/Emboss
2025-10-23 12:07:55,764 root INFO copying Bio/Emboss/Primer3.py -> build/lib.linux-riscv64-cpython-312/Bio/Emboss
2025-10-23 12:07:55,767 root INFO copying Bio/Emboss/Applications.py -> build/lib.linux-riscv64-cpython-312/Bio/Emboss
2025-10-23 12:07:55,770 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/Entrez
2025-10-23 12:07:55,771 root INFO copying Bio/Entrez/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/Entrez
2025-10-23 12:07:55,774 root INFO copying Bio/Entrez/Parser.py -> build/lib.linux-riscv64-cpython-312/Bio/Entrez
2025-10-23 12:07:55,777 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/ExPASy
2025-10-23 12:07:55,778 root INFO copying Bio/ExPASy/cellosaurus.py -> build/lib.linux-riscv64-cpython-312/Bio/ExPASy
2025-10-23 12:07:55,781 root INFO copying Bio/ExPASy/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/ExPASy
2025-10-23 12:07:55,783 root INFO copying Bio/ExPASy/Enzyme.py -> build/lib.linux-riscv64-cpython-312/Bio/ExPASy
2025-10-23 12:07:55,785 root INFO copying Bio/ExPASy/Prodoc.py -> build/lib.linux-riscv64-cpython-312/Bio/ExPASy
2025-10-23 12:07:55,788 root INFO copying Bio/ExPASy/ScanProsite.py -> build/lib.linux-riscv64-cpython-312/Bio/ExPASy
2025-10-23 12:07:55,790 root INFO copying Bio/ExPASy/Prosite.py -> build/lib.linux-riscv64-cpython-312/Bio/ExPASy
2025-10-23 12:07:55,793 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/GenBank
2025-10-23 12:07:55,795 root INFO copying Bio/GenBank/Record.py -> build/lib.linux-riscv64-cpython-312/Bio/GenBank
2025-10-23 12:07:55,797 root INFO copying Bio/GenBank/Scanner.py -> build/lib.linux-riscv64-cpython-312/Bio/GenBank
2025-10-23 12:07:55,801 root INFO copying Bio/GenBank/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/GenBank
2025-10-23 12:07:55,803 root INFO copying Bio/GenBank/utils.py -> build/lib.linux-riscv64-cpython-312/Bio/GenBank
2025-10-23 12:07:55,806 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/Geo
2025-10-23 12:07:55,807 root INFO copying Bio/Geo/Record.py -> build/lib.linux-riscv64-cpython-312/Bio/Geo
2025-10-23 12:07:55,810 root INFO copying Bio/Geo/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/Geo
2025-10-23 12:07:55,813 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/Graphics
2025-10-23 12:07:55,814 root INFO copying Bio/Graphics/ColorSpiral.py -> build/lib.linux-riscv64-cpython-312/Bio/Graphics
2025-10-23 12:07:55,817 root INFO copying Bio/Graphics/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/Graphics
2025-10-23 12:07:55,819 root INFO copying Bio/Graphics/KGML_vis.py -> build/lib.linux-riscv64-cpython-312/Bio/Graphics
2025-10-23 12:07:55,822 root INFO copying Bio/Graphics/Distribution.py -> build/lib.linux-riscv64-cpython-312/Bio/Graphics
2025-10-23 12:07:55,824 root INFO copying Bio/Graphics/BasicChromosome.py -> build/lib.linux-riscv64-cpython-312/Bio/Graphics
2025-10-23 12:07:55,826 root INFO copying Bio/Graphics/DisplayRepresentation.py -> build/lib.linux-riscv64-cpython-312/Bio/Graphics
2025-10-23 12:07:55,829 root INFO copying Bio/Graphics/Comparative.py -> build/lib.linux-riscv64-cpython-312/Bio/Graphics
2025-10-23 12:07:55,832 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/Graphics/GenomeDiagram
2025-10-23 12:07:55,834 root INFO copying Bio/Graphics/GenomeDiagram/_CrossLink.py -> build/lib.linux-riscv64-cpython-312/Bio/Graphics/GenomeDiagram
2025-10-23 12:07:55,837 root INFO copying Bio/Graphics/GenomeDiagram/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/Graphics/GenomeDiagram
2025-10-23 12:07:55,839 root INFO copying Bio/Graphics/GenomeDiagram/_AbstractDrawer.py -> build/lib.linux-riscv64-cpython-312/Bio/Graphics/GenomeDiagram
2025-10-23 12:07:55,842 root INFO copying Bio/Graphics/GenomeDiagram/_FeatureSet.py -> build/lib.linux-riscv64-cpython-312/Bio/Graphics/GenomeDiagram
2025-10-23 12:07:55,845 root INFO copying Bio/Graphics/GenomeDiagram/_Diagram.py -> build/lib.linux-riscv64-cpython-312/Bio/Graphics/GenomeDiagram
2025-10-23 12:07:55,847 root INFO copying Bio/Graphics/GenomeDiagram/_Track.py -> build/lib.linux-riscv64-cpython-312/Bio/Graphics/GenomeDiagram
2025-10-23 12:07:55,850 root INFO copying Bio/Graphics/GenomeDiagram/_CircularDrawer.py -> build/lib.linux-riscv64-cpython-312/Bio/Graphics/GenomeDiagram
2025-10-23 12:07:55,854 root INFO copying Bio/Graphics/GenomeDiagram/_LinearDrawer.py -> build/lib.linux-riscv64-cpython-312/Bio/Graphics/GenomeDiagram
2025-10-23 12:07:55,857 root INFO copying Bio/Graphics/GenomeDiagram/_GraphSet.py -> build/lib.linux-riscv64-cpython-312/Bio/Graphics/GenomeDiagram
2025-10-23 12:07:55,860 root INFO copying Bio/Graphics/GenomeDiagram/_Colors.py -> build/lib.linux-riscv64-cpython-312/Bio/Graphics/GenomeDiagram
2025-10-23 12:07:55,862 root INFO copying Bio/Graphics/GenomeDiagram/_Feature.py -> build/lib.linux-riscv64-cpython-312/Bio/Graphics/GenomeDiagram
2025-10-23 12:07:55,865 root INFO copying Bio/Graphics/GenomeDiagram/_Graph.py -> build/lib.linux-riscv64-cpython-312/Bio/Graphics/GenomeDiagram
2025-10-23 12:07:55,869 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/HMM
2025-10-23 12:07:55,870 root INFO copying Bio/HMM/Utilities.py -> build/lib.linux-riscv64-cpython-312/Bio/HMM
2025-10-23 12:07:55,873 root INFO copying Bio/HMM/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/HMM
2025-10-23 12:07:55,876 root INFO copying Bio/HMM/DynamicProgramming.py -> build/lib.linux-riscv64-cpython-312/Bio/HMM
2025-10-23 12:07:55,879 root INFO copying Bio/HMM/MarkovModel.py -> build/lib.linux-riscv64-cpython-312/Bio/HMM
2025-10-23 12:07:55,881 root INFO copying Bio/HMM/Trainer.py -> build/lib.linux-riscv64-cpython-312/Bio/HMM
2025-10-23 12:07:55,885 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/KEGG
2025-10-23 12:07:55,886 root INFO copying Bio/KEGG/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/KEGG
2025-10-23 12:07:55,889 root INFO copying Bio/KEGG/REST.py -> build/lib.linux-riscv64-cpython-312/Bio/KEGG
2025-10-23 12:07:55,893 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/KEGG/Compound
2025-10-23 12:07:55,894 root INFO copying Bio/KEGG/Compound/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/KEGG/Compound
2025-10-23 12:07:55,898 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/KEGG/Enzyme
2025-10-23 12:07:55,899 root INFO copying Bio/KEGG/Enzyme/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/KEGG/Enzyme
2025-10-23 12:07:55,902 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/KEGG/Gene
2025-10-23 12:07:55,904 root INFO copying Bio/KEGG/Gene/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/KEGG/Gene
2025-10-23 12:07:55,908 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/KEGG/Map
2025-10-23 12:07:55,909 root INFO copying Bio/KEGG/Map/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/KEGG/Map
2025-10-23 12:07:55,913 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/PDB/mmtf
2025-10-23 12:07:55,915 root INFO copying Bio/PDB/mmtf/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB/mmtf
2025-10-23 12:07:55,918 root INFO copying Bio/PDB/mmtf/mmtfio.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB/mmtf
2025-10-23 12:07:55,920 root INFO copying Bio/PDB/mmtf/DefaultParser.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB/mmtf
2025-10-23 12:07:55,924 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/KEGG/KGML
2025-10-23 12:07:55,925 root INFO copying Bio/KEGG/KGML/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/KEGG/KGML
2025-10-23 12:07:55,928 root INFO copying Bio/KEGG/KGML/KGML_parser.py -> build/lib.linux-riscv64-cpython-312/Bio/KEGG/KGML
2025-10-23 12:07:55,931 root INFO copying Bio/KEGG/KGML/KGML_pathway.py -> build/lib.linux-riscv64-cpython-312/Bio/KEGG/KGML
2025-10-23 12:07:55,934 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/Medline
2025-10-23 12:07:55,936 root INFO copying Bio/Medline/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/Medline
2025-10-23 12:07:55,940 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/motifs
2025-10-23 12:07:55,942 root INFO copying Bio/motifs/pfm.py -> build/lib.linux-riscv64-cpython-312/Bio/motifs
2025-10-23 12:07:55,945 root INFO copying Bio/motifs/thresholds.py -> build/lib.linux-riscv64-cpython-312/Bio/motifs
2025-10-23 12:07:55,947 root INFO copying Bio/motifs/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/motifs
2025-10-23 12:07:55,950 root INFO copying Bio/motifs/minimal.py -> build/lib.linux-riscv64-cpython-312/Bio/motifs
2025-10-23 12:07:55,953 root INFO copying Bio/motifs/meme.py -> build/lib.linux-riscv64-cpython-312/Bio/motifs
2025-10-23 12:07:55,956 root INFO copying Bio/motifs/alignace.py -> build/lib.linux-riscv64-cpython-312/Bio/motifs
2025-10-23 12:07:55,958 root INFO copying Bio/motifs/matrix.py -> build/lib.linux-riscv64-cpython-312/Bio/motifs
2025-10-23 12:07:55,961 root INFO copying Bio/motifs/clusterbuster.py -> build/lib.linux-riscv64-cpython-312/Bio/motifs
2025-10-23 12:07:55,964 root INFO copying Bio/motifs/transfac.py -> build/lib.linux-riscv64-cpython-312/Bio/motifs
2025-10-23 12:07:55,967 root INFO copying Bio/motifs/mast.py -> build/lib.linux-riscv64-cpython-312/Bio/motifs
2025-10-23 12:07:55,969 root INFO copying Bio/motifs/xms.py -> build/lib.linux-riscv64-cpython-312/Bio/motifs
2025-10-23 12:07:55,973 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/motifs/applications
2025-10-23 12:07:55,974 root INFO copying Bio/motifs/applications/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/motifs/applications
2025-10-23 12:07:55,977 root INFO copying Bio/motifs/applications/_xxmotif.py -> build/lib.linux-riscv64-cpython-312/Bio/motifs/applications
2025-10-23 12:07:55,980 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/motifs/jaspar
2025-10-23 12:07:55,982 root INFO copying Bio/motifs/jaspar/db.py -> build/lib.linux-riscv64-cpython-312/Bio/motifs/jaspar
2025-10-23 12:07:55,985 root INFO copying Bio/motifs/jaspar/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/motifs/jaspar
2025-10-23 12:07:55,988 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/Nexus
2025-10-23 12:07:55,990 root INFO copying Bio/Nexus/Nodes.py -> build/lib.linux-riscv64-cpython-312/Bio/Nexus
2025-10-23 12:07:55,992 root INFO copying Bio/Nexus/Nexus.py -> build/lib.linux-riscv64-cpython-312/Bio/Nexus
2025-10-23 12:07:55,996 root INFO copying Bio/Nexus/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/Nexus
2025-10-23 12:07:55,998 root INFO copying Bio/Nexus/StandardData.py -> build/lib.linux-riscv64-cpython-312/Bio/Nexus
2025-10-23 12:07:56,001 root INFO copying Bio/Nexus/Trees.py -> build/lib.linux-riscv64-cpython-312/Bio/Nexus
2025-10-23 12:07:56,005 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/NMR
2025-10-23 12:07:56,007 root INFO copying Bio/NMR/NOEtools.py -> build/lib.linux-riscv64-cpython-312/Bio/NMR
2025-10-23 12:07:56,010 root INFO copying Bio/NMR/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/NMR
2025-10-23 12:07:56,012 root INFO copying Bio/NMR/xpktools.py -> build/lib.linux-riscv64-cpython-312/Bio/NMR
2025-10-23 12:07:56,015 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/Pathway
2025-10-23 12:07:56,017 root INFO copying Bio/Pathway/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/Pathway
2025-10-23 12:07:56,021 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/Pathway/Rep
2025-10-23 12:07:56,022 root INFO copying Bio/Pathway/Rep/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/Pathway/Rep
2025-10-23 12:07:56,025 root INFO copying Bio/Pathway/Rep/Graph.py -> build/lib.linux-riscv64-cpython-312/Bio/Pathway/Rep
2025-10-23 12:07:56,028 root INFO copying Bio/Pathway/Rep/MultiGraph.py -> build/lib.linux-riscv64-cpython-312/Bio/Pathway/Rep
2025-10-23 12:07:56,034 root INFO copying Bio/PDB/Structure.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-10-23 12:07:56,037 root INFO copying Bio/PDB/Model.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-10-23 12:07:56,040 root INFO copying Bio/PDB/Selection.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-10-23 12:07:56,042 root INFO copying Bio/PDB/FragmentMapper.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-10-23 12:07:56,045 root INFO copying Bio/PDB/PDBExceptions.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-10-23 12:07:56,047 root INFO copying Bio/PDB/StructureAlignment.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-10-23 12:07:56,050 root INFO copying Bio/PDB/DSSP.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-10-23 12:07:56,053 root INFO copying Bio/PDB/ic_rebuild.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-10-23 12:07:56,055 root INFO copying Bio/PDB/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-10-23 12:07:56,058 root INFO copying Bio/PDB/MMCIFParser.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-10-23 12:07:56,061 root INFO copying Bio/PDB/MMCIF2Dict.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-10-23 12:07:56,064 root INFO copying Bio/PDB/qcprot.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-10-23 12:07:56,067 root INFO copying Bio/PDB/PDBParser.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-10-23 12:07:56,070 root INFO copying Bio/PDB/Entity.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-10-23 12:07:56,072 root INFO copying Bio/PDB/Dice.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-10-23 12:07:56,075 root INFO copying Bio/PDB/Atom.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-10-23 12:07:56,078 root INFO copying Bio/PDB/mmcifio.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-10-23 12:07:56,080 root INFO copying Bio/PDB/vectors.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-10-23 12:07:56,083 root INFO copying Bio/PDB/PDBIO.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-10-23 12:07:56,086 root INFO copying Bio/PDB/PDBList.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-10-23 12:07:56,090 root INFO copying Bio/PDB/ResidueDepth.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-10-23 12:07:56,094 root INFO copying Bio/PDB/binary_cif.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-10-23 12:07:56,097 root INFO copying Bio/PDB/SASA.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-10-23 12:07:56,101 root INFO copying Bio/PDB/HSExposure.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-10-23 12:07:56,104 root INFO copying Bio/PDB/Residue.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-10-23 12:07:56,107 root INFO copying Bio/PDB/PDBMLParser.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-10-23 12:07:56,111 root INFO copying Bio/PDB/Superimposer.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-10-23 12:07:56,114 root INFO copying Bio/PDB/NeighborSearch.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-10-23 12:07:56,117 root INFO copying Bio/PDB/cealign.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-10-23 12:07:56,120 root INFO copying Bio/PDB/Polypeptide.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-10-23 12:07:56,123 root INFO copying Bio/PDB/ic_data.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-10-23 12:07:56,128 root INFO copying Bio/PDB/parse_pdb_header.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-10-23 12:07:56,131 root INFO copying Bio/PDB/SCADIO.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-10-23 12:07:56,135 root INFO copying Bio/PDB/StructureBuilder.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-10-23 12:07:56,138 root INFO copying Bio/PDB/AbstractPropertyMap.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-10-23 12:07:56,141 root INFO copying Bio/PDB/PSEA.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-10-23 12:07:56,145 root INFO copying Bio/PDB/internal_coords.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-10-23 12:07:56,150 root INFO copying Bio/PDB/PICIO.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-10-23 12:07:56,154 root INFO copying Bio/PDB/Chain.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-10-23 12:07:56,157 root INFO copying Bio/PDB/NACCESS.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-10-23 12:07:56,160 root INFO copying Bio/PDB/alphafold_db.py -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-10-23 12:07:56,164 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/phenotype
2025-10-23 12:07:56,166 root INFO copying Bio/phenotype/phen_micro.py -> build/lib.linux-riscv64-cpython-312/Bio/phenotype
2025-10-23 12:07:56,170 root INFO copying Bio/phenotype/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/phenotype
2025-10-23 12:07:56,173 root INFO copying Bio/phenotype/pm_fitting.py -> build/lib.linux-riscv64-cpython-312/Bio/phenotype
2025-10-23 12:07:56,177 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/PopGen
2025-10-23 12:07:56,178 root INFO copying Bio/PopGen/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/PopGen
2025-10-23 12:07:56,182 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/PopGen/GenePop
2025-10-23 12:07:56,184 root INFO copying Bio/PopGen/GenePop/EasyController.py -> build/lib.linux-riscv64-cpython-312/Bio/PopGen/GenePop
2025-10-23 12:07:56,187 root INFO copying Bio/PopGen/GenePop/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/PopGen/GenePop
2025-10-23 12:07:56,191 root INFO copying Bio/PopGen/GenePop/FileParser.py -> build/lib.linux-riscv64-cpython-312/Bio/PopGen/GenePop
2025-10-23 12:07:56,194 root INFO copying Bio/PopGen/GenePop/Controller.py -> build/lib.linux-riscv64-cpython-312/Bio/PopGen/GenePop
2025-10-23 12:07:56,197 root INFO copying Bio/PopGen/GenePop/LargeFileParser.py -> build/lib.linux-riscv64-cpython-312/Bio/PopGen/GenePop
2025-10-23 12:07:56,201 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/Restriction
2025-10-23 12:07:56,203 root INFO copying Bio/Restriction/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/Restriction
2025-10-23 12:07:56,206 root INFO copying Bio/Restriction/PrintFormat.py -> build/lib.linux-riscv64-cpython-312/Bio/Restriction
2025-10-23 12:07:56,209 root INFO copying Bio/Restriction/Restriction_Dictionary.py -> build/lib.linux-riscv64-cpython-312/Bio/Restriction
2025-10-23 12:07:56,219 root INFO copying Bio/Restriction/Restriction.py -> build/lib.linux-riscv64-cpython-312/Bio/Restriction
2025-10-23 12:07:56,226 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/SCOP
2025-10-23 12:07:56,228 root INFO copying Bio/SCOP/Raf.py -> build/lib.linux-riscv64-cpython-312/Bio/SCOP
2025-10-23 12:07:56,232 root INFO copying Bio/SCOP/Residues.py -> build/lib.linux-riscv64-cpython-312/Bio/SCOP
2025-10-23 12:07:56,235 root INFO copying Bio/SCOP/Cla.py -> build/lib.linux-riscv64-cpython-312/Bio/SCOP
2025-10-23 12:07:56,239 root INFO copying Bio/SCOP/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/SCOP
2025-10-23 12:07:56,243 root INFO copying Bio/SCOP/Dom.py -> build/lib.linux-riscv64-cpython-312/Bio/SCOP
2025-10-23 12:07:56,247 root INFO copying Bio/SCOP/Hie.py -> build/lib.linux-riscv64-cpython-312/Bio/SCOP
2025-10-23 12:07:56,251 root INFO copying Bio/SCOP/Des.py -> build/lib.linux-riscv64-cpython-312/Bio/SCOP
2025-10-23 12:07:56,256 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/SearchIO
2025-10-23 12:07:56,258 root INFO copying Bio/SearchIO/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/SearchIO
2025-10-23 12:07:56,261 root INFO copying Bio/SearchIO/BlatIO.py -> build/lib.linux-riscv64-cpython-312/Bio/SearchIO
2025-10-23 12:07:56,264 root INFO copying Bio/SearchIO/_index.py -> build/lib.linux-riscv64-cpython-312/Bio/SearchIO
2025-10-23 12:07:56,267 root INFO copying Bio/SearchIO/FastaIO.py -> build/lib.linux-riscv64-cpython-312/Bio/SearchIO
2025-10-23 12:07:56,270 root INFO copying Bio/SearchIO/_utils.py -> build/lib.linux-riscv64-cpython-312/Bio/SearchIO
2025-10-23 12:07:56,275 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/SearchIO/_model
2025-10-23 12:07:56,276 root INFO copying Bio/SearchIO/_model/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/SearchIO/_model
2025-10-23 12:07:56,279 root INFO copying Bio/SearchIO/_model/_base.py -> build/lib.linux-riscv64-cpython-312/Bio/SearchIO/_model
2025-10-23 12:07:56,282 root INFO copying Bio/SearchIO/_model/query.py -> build/lib.linux-riscv64-cpython-312/Bio/SearchIO/_model
2025-10-23 12:07:56,285 root INFO copying Bio/SearchIO/_model/hsp.py -> build/lib.linux-riscv64-cpython-312/Bio/SearchIO/_model
2025-10-23 12:07:56,289 root INFO copying Bio/SearchIO/_model/hit.py -> build/lib.linux-riscv64-cpython-312/Bio/SearchIO/_model
2025-10-23 12:07:56,293 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/SearchIO/BlastIO
2025-10-23 12:07:56,295 root INFO copying Bio/SearchIO/BlastIO/blast_tab.py -> build/lib.linux-riscv64-cpython-312/Bio/SearchIO/BlastIO
2025-10-23 12:07:56,299 root INFO copying Bio/SearchIO/BlastIO/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/SearchIO/BlastIO
2025-10-23 12:07:56,302 root INFO copying Bio/SearchIO/BlastIO/blast_xml.py -> build/lib.linux-riscv64-cpython-312/Bio/SearchIO/BlastIO
2025-10-23 12:07:56,306 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/SearchIO/HHsuiteIO
2025-10-23 12:07:56,308 root INFO copying Bio/SearchIO/HHsuiteIO/hhsuite2_text.py -> build/lib.linux-riscv64-cpython-312/Bio/SearchIO/HHsuiteIO
2025-10-23 12:07:56,311 root INFO copying Bio/SearchIO/HHsuiteIO/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/SearchIO/HHsuiteIO
2025-10-23 12:07:56,315 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/SearchIO/HmmerIO
2025-10-23 12:07:56,316 root INFO copying Bio/SearchIO/HmmerIO/hmmer3_domtab.py -> build/lib.linux-riscv64-cpython-312/Bio/SearchIO/HmmerIO
2025-10-23 12:07:56,319 root INFO copying Bio/SearchIO/HmmerIO/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/SearchIO/HmmerIO
2025-10-23 12:07:56,322 root INFO copying Bio/SearchIO/HmmerIO/hmmer2_text.py -> build/lib.linux-riscv64-cpython-312/Bio/SearchIO/HmmerIO
2025-10-23 12:07:56,325 root INFO copying Bio/SearchIO/HmmerIO/hmmer3_text.py -> build/lib.linux-riscv64-cpython-312/Bio/SearchIO/HmmerIO
2025-10-23 12:07:56,328 root INFO copying Bio/SearchIO/HmmerIO/hmmer3_tab.py -> build/lib.linux-riscv64-cpython-312/Bio/SearchIO/HmmerIO
2025-10-23 12:07:56,331 root INFO copying Bio/SearchIO/HmmerIO/_base.py -> build/lib.linux-riscv64-cpython-312/Bio/SearchIO/HmmerIO
2025-10-23 12:07:56,335 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/SearchIO/ExonerateIO
2025-10-23 12:07:56,337 root INFO copying Bio/SearchIO/ExonerateIO/exonerate_vulgar.py -> build/lib.linux-riscv64-cpython-312/Bio/SearchIO/ExonerateIO
2025-10-23 12:07:56,339 root INFO copying Bio/SearchIO/ExonerateIO/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/SearchIO/ExonerateIO
2025-10-23 12:07:56,342 root INFO copying Bio/SearchIO/ExonerateIO/exonerate_text.py -> build/lib.linux-riscv64-cpython-312/Bio/SearchIO/ExonerateIO
2025-10-23 12:07:56,345 root INFO copying Bio/SearchIO/ExonerateIO/_base.py -> build/lib.linux-riscv64-cpython-312/Bio/SearchIO/ExonerateIO
2025-10-23 12:07:56,348 root INFO copying Bio/SearchIO/ExonerateIO/exonerate_cigar.py -> build/lib.linux-riscv64-cpython-312/Bio/SearchIO/ExonerateIO
2025-10-23 12:07:56,352 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/SearchIO/InterproscanIO
2025-10-23 12:07:56,354 root INFO copying Bio/SearchIO/InterproscanIO/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/SearchIO/InterproscanIO
2025-10-23 12:07:56,356 root INFO copying Bio/SearchIO/InterproscanIO/interproscan_xml.py -> build/lib.linux-riscv64-cpython-312/Bio/SearchIO/InterproscanIO
2025-10-23 12:07:56,361 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/SeqIO
2025-10-23 12:07:56,363 root INFO copying Bio/SeqIO/PdbIO.py -> build/lib.linux-riscv64-cpython-312/Bio/SeqIO
2025-10-23 12:07:56,366 root INFO copying Bio/SeqIO/Interfaces.py -> build/lib.linux-riscv64-cpython-312/Bio/SeqIO
2025-10-23 12:07:56,369 root INFO copying Bio/SeqIO/TwoBitIO.py -> build/lib.linux-riscv64-cpython-312/Bio/SeqIO
2025-10-23 12:07:56,372 root INFO copying Bio/SeqIO/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/SeqIO
2025-10-23 12:07:56,375 root INFO copying Bio/SeqIO/SffIO.py -> build/lib.linux-riscv64-cpython-312/Bio/SeqIO
2025-10-23 12:07:56,378 root INFO copying Bio/SeqIO/PirIO.py -> build/lib.linux-riscv64-cpython-312/Bio/SeqIO
2025-10-23 12:07:56,381 root INFO copying Bio/SeqIO/IgIO.py -> build/lib.linux-riscv64-cpython-312/Bio/SeqIO
2025-10-23 12:07:56,384 root INFO copying Bio/SeqIO/QualityIO.py -> build/lib.linux-riscv64-cpython-312/Bio/SeqIO
2025-10-23 12:07:56,388 root INFO copying Bio/SeqIO/SeqXmlIO.py -> build/lib.linux-riscv64-cpython-312/Bio/SeqIO
2025-10-23 12:07:56,390 root INFO copying Bio/SeqIO/AbiIO.py -> build/lib.linux-riscv64-cpython-312/Bio/SeqIO
2025-10-23 12:07:56,393 root INFO copying Bio/SeqIO/GckIO.py -> build/lib.linux-riscv64-cpython-312/Bio/SeqIO
2025-10-23 12:07:56,396 root INFO copying Bio/SeqIO/AceIO.py -> build/lib.linux-riscv64-cpython-312/Bio/SeqIO
2025-10-23 12:07:56,399 root INFO copying Bio/SeqIO/InsdcIO.py -> build/lib.linux-riscv64-cpython-312/Bio/SeqIO
2025-10-23 12:07:56,402 root INFO copying Bio/SeqIO/_index.py -> build/lib.linux-riscv64-cpython-312/Bio/SeqIO
2025-10-23 12:07:56,405 root INFO copying Bio/SeqIO/TabIO.py -> build/lib.linux-riscv64-cpython-312/Bio/SeqIO
2025-10-23 12:07:56,408 root INFO copying Bio/SeqIO/GfaIO.py -> build/lib.linux-riscv64-cpython-312/Bio/SeqIO
2025-10-23 12:07:56,411 root INFO copying Bio/SeqIO/FastaIO.py -> build/lib.linux-riscv64-cpython-312/Bio/SeqIO
2025-10-23 12:07:56,414 root INFO copying Bio/SeqIO/SnapGeneIO.py -> build/lib.linux-riscv64-cpython-312/Bio/SeqIO
2025-10-23 12:07:56,416 root INFO copying Bio/SeqIO/NibIO.py -> build/lib.linux-riscv64-cpython-312/Bio/SeqIO
2025-10-23 12:07:56,419 root INFO copying Bio/SeqIO/SwissIO.py -> build/lib.linux-riscv64-cpython-312/Bio/SeqIO
2025-10-23 12:07:56,422 root INFO copying Bio/SeqIO/PhdIO.py -> build/lib.linux-riscv64-cpython-312/Bio/SeqIO
2025-10-23 12:07:56,425 root INFO copying Bio/SeqIO/XdnaIO.py -> build/lib.linux-riscv64-cpython-312/Bio/SeqIO
2025-10-23 12:07:56,428 root INFO copying Bio/SeqIO/UniprotIO.py -> build/lib.linux-riscv64-cpython-312/Bio/SeqIO
2025-10-23 12:07:56,432 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/SeqUtils
2025-10-23 12:07:56,434 root INFO copying Bio/SeqUtils/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/SeqUtils
2025-10-23 12:07:56,437 root INFO copying Bio/SeqUtils/CheckSum.py -> build/lib.linux-riscv64-cpython-312/Bio/SeqUtils
2025-10-23 12:07:56,440 root INFO copying Bio/SeqUtils/lcc.py -> build/lib.linux-riscv64-cpython-312/Bio/SeqUtils
2025-10-23 12:07:56,442 root INFO copying Bio/SeqUtils/MeltingTemp.py -> build/lib.linux-riscv64-cpython-312/Bio/SeqUtils
2025-10-23 12:07:56,446 root INFO copying Bio/SeqUtils/ProtParamData.py -> build/lib.linux-riscv64-cpython-312/Bio/SeqUtils
2025-10-23 12:07:56,449 root INFO copying Bio/SeqUtils/IsoelectricPoint.py -> build/lib.linux-riscv64-cpython-312/Bio/SeqUtils
2025-10-23 12:07:56,452 root INFO copying Bio/SeqUtils/ProtParam.py -> build/lib.linux-riscv64-cpython-312/Bio/SeqUtils
2025-10-23 12:07:56,456 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/Sequencing
2025-10-23 12:07:56,458 root INFO copying Bio/Sequencing/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/Sequencing
2025-10-23 12:07:56,461 root INFO copying Bio/Sequencing/Ace.py -> build/lib.linux-riscv64-cpython-312/Bio/Sequencing
2025-10-23 12:07:56,464 root INFO copying Bio/Sequencing/Phd.py -> build/lib.linux-riscv64-cpython-312/Bio/Sequencing
2025-10-23 12:07:56,469 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/Sequencing/Applications
2025-10-23 12:07:56,470 root INFO copying Bio/Sequencing/Applications/_samtools.py -> build/lib.linux-riscv64-cpython-312/Bio/Sequencing/Applications
2025-10-23 12:07:56,474 root INFO copying Bio/Sequencing/Applications/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/Sequencing/Applications
2025-10-23 12:07:56,477 root INFO copying Bio/Sequencing/Applications/_bwa.py -> build/lib.linux-riscv64-cpython-312/Bio/Sequencing/Applications
2025-10-23 12:07:56,481 root INFO copying Bio/Sequencing/Applications/_Novoalign.py -> build/lib.linux-riscv64-cpython-312/Bio/Sequencing/Applications
2025-10-23 12:07:56,485 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/SVDSuperimposer
2025-10-23 12:07:56,487 root INFO copying Bio/SVDSuperimposer/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/SVDSuperimposer
2025-10-23 12:07:56,491 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/SwissProt
2025-10-23 12:07:56,492 root INFO copying Bio/SwissProt/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/SwissProt
2025-10-23 12:07:56,496 root INFO copying Bio/SwissProt/KeyWList.py -> build/lib.linux-riscv64-cpython-312/Bio/SwissProt
2025-10-23 12:07:56,500 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/TogoWS
2025-10-23 12:07:56,502 root INFO copying Bio/TogoWS/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/TogoWS
2025-10-23 12:07:56,507 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/Phylo
2025-10-23 12:07:56,509 root INFO copying Bio/Phylo/NeXMLIO.py -> build/lib.linux-riscv64-cpython-312/Bio/Phylo
2025-10-23 12:07:56,512 root INFO copying Bio/Phylo/CDAOIO.py -> build/lib.linux-riscv64-cpython-312/Bio/Phylo
2025-10-23 12:07:56,516 root INFO copying Bio/Phylo/_cdao_owl.py -> build/lib.linux-riscv64-cpython-312/Bio/Phylo
2025-10-23 12:07:56,520 root INFO copying Bio/Phylo/CDAO.py -> build/lib.linux-riscv64-cpython-312/Bio/Phylo
2025-10-23 12:07:56,523 root INFO copying Bio/Phylo/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/Phylo
2025-10-23 12:07:56,526 root INFO copying Bio/Phylo/TreeConstruction.py -> build/lib.linux-riscv64-cpython-312/Bio/Phylo
2025-10-23 12:07:56,530 root INFO copying Bio/Phylo/Newick.py -> build/lib.linux-riscv64-cpython-312/Bio/Phylo
2025-10-23 12:07:56,533 root INFO copying Bio/Phylo/PhyloXML.py -> build/lib.linux-riscv64-cpython-312/Bio/Phylo
2025-10-23 12:07:56,536 root INFO copying Bio/Phylo/NexusIO.py -> build/lib.linux-riscv64-cpython-312/Bio/Phylo
2025-10-23 12:07:56,540 root INFO copying Bio/Phylo/Consensus.py -> build/lib.linux-riscv64-cpython-312/Bio/Phylo
2025-10-23 12:07:56,544 root INFO copying Bio/Phylo/_io.py -> build/lib.linux-riscv64-cpython-312/Bio/Phylo
2025-10-23 12:07:56,547 root INFO copying Bio/Phylo/BaseTree.py -> build/lib.linux-riscv64-cpython-312/Bio/Phylo
2025-10-23 12:07:56,551 root INFO copying Bio/Phylo/_utils.py -> build/lib.linux-riscv64-cpython-312/Bio/Phylo
2025-10-23 12:07:56,555 root INFO copying Bio/Phylo/PhyloXMLIO.py -> build/lib.linux-riscv64-cpython-312/Bio/Phylo
2025-10-23 12:07:56,559 root INFO copying Bio/Phylo/NewickIO.py -> build/lib.linux-riscv64-cpython-312/Bio/Phylo
2025-10-23 12:07:56,563 root INFO copying Bio/Phylo/NeXML.py -> build/lib.linux-riscv64-cpython-312/Bio/Phylo
2025-10-23 12:07:56,568 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/Phylo/Applications
2025-10-23 12:07:56,570 root INFO copying Bio/Phylo/Applications/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/Phylo/Applications
2025-10-23 12:07:56,575 root INFO copying Bio/Phylo/Applications/_Phyml.py -> build/lib.linux-riscv64-cpython-312/Bio/Phylo/Applications
2025-10-23 12:07:56,579 root INFO copying Bio/Phylo/Applications/_Raxml.py -> build/lib.linux-riscv64-cpython-312/Bio/Phylo/Applications
2025-10-23 12:07:56,583 root INFO copying Bio/Phylo/Applications/_Fasttree.py -> build/lib.linux-riscv64-cpython-312/Bio/Phylo/Applications
2025-10-23 12:07:56,588 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/Phylo/PAML
2025-10-23 12:07:56,591 root INFO copying Bio/Phylo/PAML/_paml.py -> build/lib.linux-riscv64-cpython-312/Bio/Phylo/PAML
2025-10-23 12:07:56,595 root INFO copying Bio/Phylo/PAML/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/Phylo/PAML
2025-10-23 12:07:56,598 root INFO copying Bio/Phylo/PAML/chi2.py -> build/lib.linux-riscv64-cpython-312/Bio/Phylo/PAML
2025-10-23 12:07:56,602 root INFO copying Bio/Phylo/PAML/codeml.py -> build/lib.linux-riscv64-cpython-312/Bio/Phylo/PAML
2025-10-23 12:07:56,606 root INFO copying Bio/Phylo/PAML/_parse_baseml.py -> build/lib.linux-riscv64-cpython-312/Bio/Phylo/PAML
2025-10-23 12:07:56,610 root INFO copying Bio/Phylo/PAML/_parse_codeml.py -> build/lib.linux-riscv64-cpython-312/Bio/Phylo/PAML
2025-10-23 12:07:56,614 root INFO copying Bio/Phylo/PAML/baseml.py -> build/lib.linux-riscv64-cpython-312/Bio/Phylo/PAML
2025-10-23 12:07:56,618 root INFO copying Bio/Phylo/PAML/yn00.py -> build/lib.linux-riscv64-cpython-312/Bio/Phylo/PAML
2025-10-23 12:07:56,622 root INFO copying Bio/Phylo/PAML/_parse_yn00.py -> build/lib.linux-riscv64-cpython-312/Bio/Phylo/PAML
2025-10-23 12:07:56,627 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/UniGene
2025-10-23 12:07:56,629 root INFO copying Bio/UniGene/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/UniGene
2025-10-23 12:07:56,634 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/UniProt
2025-10-23 12:07:56,636 root INFO copying Bio/UniProt/GOA.py -> build/lib.linux-riscv64-cpython-312/Bio/UniProt
2025-10-23 12:07:56,640 root INFO copying Bio/UniProt/__init__.py -> build/lib.linux-riscv64-cpython-312/Bio/UniProt
2025-10-23 12:07:56,646 root INFO creating build/lib.linux-riscv64-cpython-312/BioSQL
2025-10-23 12:07:56,648 root INFO copying BioSQL/BioSeq.py -> build/lib.linux-riscv64-cpython-312/BioSQL
2025-10-23 12:07:56,652 root INFO copying BioSQL/DBUtils.py -> build/lib.linux-riscv64-cpython-312/BioSQL
2025-10-23 12:07:56,656 root INFO copying BioSQL/__init__.py -> build/lib.linux-riscv64-cpython-312/BioSQL
2025-10-23 12:07:56,660 root INFO copying BioSQL/BioSeqDatabase.py -> build/lib.linux-riscv64-cpython-312/BioSQL
2025-10-23 12:07:56,664 root INFO copying BioSQL/Loader.py -> build/lib.linux-riscv64-cpython-312/BioSQL
2025-10-23 12:07:56,669 root INFO running egg_info
2025-10-23 12:07:56,709 root INFO writing biopython.egg-info/PKG-INFO
2025-10-23 12:07:56,715 root INFO writing dependency_links to biopython.egg-info/dependency_links.txt
2025-10-23 12:07:56,718 root INFO writing requirements to biopython.egg-info/requires.txt
2025-10-23 12:07:56,720 root INFO writing top-level names to biopython.egg-info/top_level.txt
2025-10-23 12:07:56,952 root INFO reading manifest file 'biopython.egg-info/SOURCES.txt'
2025-10-23 12:07:57,723 root INFO reading manifest template 'MANIFEST.in'
2025-10-23 12:07:58,454 root WARNING warning: no previously-included files found matching 'Doc/_build'
2025-10-23 12:07:58,489 root WARNING warning: no previously-included files found matching 'Tests/Gck/DGVC_GCK.zip'
2025-10-23 12:07:58,504 root WARNING warning: no previously-included files matching '*.pyc' found anywhere in distribution
2025-10-23 12:07:58,519 root WARNING warning: no previously-included files matching '*.pyo' found anywhere in distribution
2025-10-23 12:07:58,533 root WARNING warning: no previously-included files matching '*.py{}' found anywhere in distribution
2025-10-23 12:07:58,548 root WARNING warning: no previously-included files matching '*.py-e' found anywhere in distribution
2025-10-23 12:07:58,592 root WARNING warning: no previously-included files found matching 'Bio/Align/substitution_matrices/data/README.txt'
2025-10-23 12:07:58,593 root INFO adding license file 'LICENSE'
2025-10-23 12:07:58,594 root INFO adding license file 'LICENSE.rst'
2025-10-23 12:07:58,837 root INFO writing manifest file 'biopython.egg-info/SOURCES.txt'
/usr/lib/python3.12/site-packages/setuptools/command/build_py.py:212: _Warning: Package 'Bio.Align.substitution_matrices.data' is absent from the `packages` configuration.
!!

        ********************************************************************************
        ############################
        # Package would be ignored #
        ############################
        Python recognizes 'Bio.Align.substitution_matrices.data' as an importable package[^1],
        but it is absent from setuptools' `packages` configuration.

        This leads to an ambiguous overall configuration. If you want to distribute this
        package, please make sure that 'Bio.Align.substitution_matrices.data' is explicitly added
        to the `packages` configuration field.

        Alternatively, you can also rely on setuptools' discovery methods
        (for example by using `find_namespace_packages(...)`/`find_namespace:`
        instead of `find_packages(...)`/`find:`).

        You can read more about "package discovery" on setuptools documentation page:

        - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

        If you don't want 'Bio.Align.substitution_matrices.data' to be distributed and are
        already explicitly excluding 'Bio.Align.substitution_matrices.data' via
        `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
        you can try to use `exclude_package_data`, or `include-package-data=False` in
        combination with a more fine grained `package-data` configuration.

        You can read more about "package data files" on setuptools documentation page:

        - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


        [^1]: For Python, any directory (with suitable naming) can be imported,
              even if it does not contain any `.py` files.
              On the other hand, currently there is no concept of package data
              directory, all directories are treated like packages.
        ********************************************************************************

!!
  check.warn(importable)
/usr/lib/python3.12/site-packages/setuptools/command/build_py.py:212: _Warning: Package 'Bio.Entrez.DTDs' is absent from the `packages` configuration.
!!

        ********************************************************************************
        ############################
        # Package would be ignored #
        ############################
        Python recognizes 'Bio.Entrez.DTDs' as an importable package[^1],
        but it is absent from setuptools' `packages` configuration.

        This leads to an ambiguous overall configuration. If you want to distribute this
        package, please make sure that 'Bio.Entrez.DTDs' is explicitly added
        to the `packages` configuration field.

        Alternatively, you can also rely on setuptools' discovery methods
        (for example by using `find_namespace_packages(...)`/`find_namespace:`
        instead of `find_packages(...)`/`find:`).

        You can read more about "package discovery" on setuptools documentation page:

        - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

        If you don't want 'Bio.Entrez.DTDs' to be distributed and are
        already explicitly excluding 'Bio.Entrez.DTDs' via
        `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
        you can try to use `exclude_package_data`, or `include-package-data=False` in
        combination with a more fine grained `package-data` configuration.

        You can read more about "package data files" on setuptools documentation page:

        - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


        [^1]: For Python, any directory (with suitable naming) can be imported,
              even if it does not contain any `.py` files.
              On the other hand, currently there is no concept of package data
              directory, all directories are treated like packages.
        ********************************************************************************

!!
  check.warn(importable)
/usr/lib/python3.12/site-packages/setuptools/command/build_py.py:212: _Warning: Package 'Bio.Entrez.XSDs' is absent from the `packages` configuration.
!!

        ********************************************************************************
        ############################
        # Package would be ignored #
        ############################
        Python recognizes 'Bio.Entrez.XSDs' as an importable package[^1],
        but it is absent from setuptools' `packages` configuration.

        This leads to an ambiguous overall configuration. If you want to distribute this
        package, please make sure that 'Bio.Entrez.XSDs' is explicitly added
        to the `packages` configuration field.

        Alternatively, you can also rely on setuptools' discovery methods
        (for example by using `find_namespace_packages(...)`/`find_namespace:`
        instead of `find_packages(...)`/`find:`).

        You can read more about "package discovery" on setuptools documentation page:

        - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

        If you don't want 'Bio.Entrez.XSDs' to be distributed and are
        already explicitly excluding 'Bio.Entrez.XSDs' via
        `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
        you can try to use `exclude_package_data`, or `include-package-data=False` in
        combination with a more fine grained `package-data` configuration.

        You can read more about "package data files" on setuptools documentation page:

        - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


        [^1]: For Python, any directory (with suitable naming) can be imported,
              even if it does not contain any `.py` files.
              On the other hand, currently there is no concept of package data
              directory, all directories are treated like packages.
        ********************************************************************************

!!
  check.warn(importable)
2025-10-23 12:07:59,096 root INFO copying Bio/cpairwise2module.c -> build/lib.linux-riscv64-cpython-312/Bio
2025-10-23 12:07:59,100 root INFO copying Bio/py.typed -> build/lib.linux-riscv64-cpython-312/Bio
2025-10-23 12:07:59,103 root INFO copying Bio/Align/_aligncore.c -> build/lib.linux-riscv64-cpython-312/Bio/Align
2025-10-23 12:07:59,106 root INFO copying Bio/Align/_codonaligner.c -> build/lib.linux-riscv64-cpython-312/Bio/Align
2025-10-23 12:07:59,109 root INFO copying Bio/Align/_pairwisealigner.c -> build/lib.linux-riscv64-cpython-312/Bio/Align
2025-10-23 12:07:59,115 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data
2025-10-23 12:07:59,116 root INFO copying Bio/Align/substitution_matrices/data/BENNER22 -> build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data
2025-10-23 12:07:59,119 root INFO copying Bio/Align/substitution_matrices/data/BENNER6 -> build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data
2025-10-23 12:07:59,122 root INFO copying Bio/Align/substitution_matrices/data/BENNER74 -> build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data
2025-10-23 12:07:59,126 root INFO copying Bio/Align/substitution_matrices/data/BLASTN -> build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data
2025-10-23 12:07:59,128 root INFO copying Bio/Align/substitution_matrices/data/BLASTP -> build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data
2025-10-23 12:07:59,131 root INFO copying Bio/Align/substitution_matrices/data/BLOSUM45 -> build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data
2025-10-23 12:07:59,134 root INFO copying Bio/Align/substitution_matrices/data/BLOSUM50 -> build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data
2025-10-23 12:07:59,138 root INFO copying Bio/Align/substitution_matrices/data/BLOSUM62 -> build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data
2025-10-23 12:07:59,141 root INFO copying Bio/Align/substitution_matrices/data/BLOSUM80 -> build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data
2025-10-23 12:07:59,143 root INFO copying Bio/Align/substitution_matrices/data/BLOSUM90 -> build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data
2025-10-23 12:07:59,146 root INFO copying Bio/Align/substitution_matrices/data/DAYHOFF -> build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data
2025-10-23 12:07:59,149 root INFO copying Bio/Align/substitution_matrices/data/FENG -> build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data
2025-10-23 12:07:59,152 root INFO copying Bio/Align/substitution_matrices/data/GENETIC -> build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data
2025-10-23 12:07:59,155 root INFO copying Bio/Align/substitution_matrices/data/GONNET1992 -> build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data
2025-10-23 12:07:59,158 root INFO copying Bio/Align/substitution_matrices/data/HOXD70 -> build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data
2025-10-23 12:07:59,161 root INFO copying Bio/Align/substitution_matrices/data/JOHNSON -> build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data
2025-10-23 12:07:59,164 root INFO copying Bio/Align/substitution_matrices/data/JONES -> build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data
2025-10-23 12:07:59,167 root INFO copying Bio/Align/substitution_matrices/data/LEVIN -> build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data
2025-10-23 12:07:59,170 root INFO copying Bio/Align/substitution_matrices/data/MCLACHLAN -> build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data
2025-10-23 12:07:59,173 root INFO copying Bio/Align/substitution_matrices/data/MDM78 -> build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data
2025-10-23 12:07:59,176 root INFO copying Bio/Align/substitution_matrices/data/MEGABLAST -> build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data
2025-10-23 12:07:59,179 root INFO copying Bio/Align/substitution_matrices/data/NUC.4.4 -> build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data
2025-10-23 12:07:59,182 root INFO copying Bio/Align/substitution_matrices/data/PAM250 -> build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data
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2025-10-23 12:07:59,987 root INFO copying Bio/Entrez/DTDs/para.ent -> build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs
2025-10-23 12:07:59,990 root INFO copying Bio/Entrez/DTDs/phrase.ent -> build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs
2025-10-23 12:07:59,993 root INFO copying Bio/Entrez/DTDs/pmc-1.dtd -> build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs
2025-10-23 12:07:59,996 root INFO copying Bio/Entrez/DTDs/pubmed_020114.dtd -> build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs
2025-10-23 12:07:59,999 root INFO copying Bio/Entrez/DTDs/pubmed_080101.dtd -> build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs
2025-10-23 12:08:00,002 root INFO copying Bio/Entrez/DTDs/pubmed_090101.dtd -> build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs
2025-10-23 12:08:00,005 root INFO copying Bio/Entrez/DTDs/pubmed_100101.dtd -> build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs
2025-10-23 12:08:00,009 root INFO copying Bio/Entrez/DTDs/pubmed_100301.dtd -> build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs
2025-10-23 12:08:00,011 root INFO copying Bio/Entrez/DTDs/pubmed_110101.dtd -> build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs
2025-10-23 12:08:00,014 root INFO copying Bio/Entrez/DTDs/pubmed_120101.dtd -> build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs
2025-10-23 12:08:00,017 root INFO copying Bio/Entrez/DTDs/pubmed_130101.dtd -> build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs
2025-10-23 12:08:00,020 root INFO copying Bio/Entrez/DTDs/pubmed_130501.dtd -> build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs
2025-10-23 12:08:00,023 root INFO copying Bio/Entrez/DTDs/pubmed_140101.dtd -> build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs
2025-10-23 12:08:00,026 root INFO copying Bio/Entrez/DTDs/pubmed_150101.dtd -> build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs
2025-10-23 12:08:00,029 root INFO copying Bio/Entrez/DTDs/pubmed_180101.dtd -> build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs
2025-10-23 12:08:00,032 root INFO copying Bio/Entrez/DTDs/pubmed_180601.dtd -> build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs
2025-10-23 12:08:00,035 root INFO copying Bio/Entrez/DTDs/pubmed_190101.dtd -> build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs
2025-10-23 12:08:00,038 root INFO copying Bio/Entrez/DTDs/references.ent -> build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs
2025-10-23 12:08:00,041 root INFO copying Bio/Entrez/DTDs/section.ent -> build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs
2025-10-23 12:08:00,044 root INFO copying Bio/Entrez/DTDs/taxon.dtd -> build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs
2025-10-23 12:08:00,047 root INFO copying Bio/Entrez/DTDs/xhtml-inlstyle-1.mod -> build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs
2025-10-23 12:08:00,051 root INFO copying Bio/Entrez/DTDs/xhtml-table-1.mod -> build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs
2025-10-23 12:08:00,054 root INFO copying Bio/Entrez/DTDs/xmlspecchars.ent -> build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs
2025-10-23 12:08:00,057 root INFO creating build/lib.linux-riscv64-cpython-312/Bio/Entrez/XSDs
2025-10-23 12:08:00,058 root INFO copying Bio/Entrez/XSDs/IPGReportSet.xsd -> build/lib.linux-riscv64-cpython-312/Bio/Entrez/XSDs
2025-10-23 12:08:00,061 root INFO copying Bio/Entrez/XSDs/NCBI_BlastOutput2.mod.xsd -> build/lib.linux-riscv64-cpython-312/Bio/Entrez/XSDs
2025-10-23 12:08:00,064 root INFO copying Bio/Entrez/XSDs/NCBI_BlastOutput2.xsd -> build/lib.linux-riscv64-cpython-312/Bio/Entrez/XSDs
2025-10-23 12:08:00,067 root INFO copying Bio/motifs/_pwm.c -> build/lib.linux-riscv64-cpython-312/Bio/motifs
2025-10-23 12:08:00,070 root INFO copying Bio/Nexus/cnexus.c -> build/lib.linux-riscv64-cpython-312/Bio/Nexus
2025-10-23 12:08:00,073 root INFO copying Bio/PDB/bcifhelpermodule.c -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-10-23 12:08:00,076 root INFO copying Bio/PDB/ccealignmodule.c -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-10-23 12:08:00,079 root INFO copying Bio/PDB/kdtrees.c -> build/lib.linux-riscv64-cpython-312/Bio/PDB
2025-10-23 12:08:00,082 root INFO copying Bio/SeqIO/_twoBitIO.c -> build/lib.linux-riscv64-cpython-312/Bio/SeqIO
2025-10-23 12:08:00,085 root INFO copying BioSQL/py.typed -> build/lib.linux-riscv64-cpython-312/BioSQL
2025-10-23 12:08:00,151 root INFO running build_ext
2025-10-23 12:08:00,167 root INFO building 'Bio.Align._codonaligner' extension
2025-10-23 12:08:00,169 root INFO creating build/temp.linux-riscv64-cpython-312/Bio/Align
2025-10-23 12:08:00,172 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.12 -c Bio/Align/_codonaligner.c -o build/temp.linux-riscv64-cpython-312/Bio/Align/_codonaligner.o
2025-10-23 12:08:04,085 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-riscv64-cpython-312/Bio/Align/_codonaligner.o -L/usr/lib -o build/lib.linux-riscv64-cpython-312/Bio/Align/_codonaligner.cpython-312-riscv64-linux-musl.so
2025-10-23 12:08:04,140 root INFO building 'Bio.Align._pairwisealigner' extension
2025-10-23 12:08:04,143 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.12 -c Bio/Align/_pairwisealigner.c -o build/temp.linux-riscv64-cpython-312/Bio/Align/_pairwisealigner.o
2025-10-23 12:08:46,483 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-riscv64-cpython-312/Bio/Align/_pairwisealigner.o -L/usr/lib -o build/lib.linux-riscv64-cpython-312/Bio/Align/_pairwisealigner.cpython-312-riscv64-linux-musl.so
2025-10-23 12:08:46,582 root INFO building 'Bio.Align._aligncore' extension
2025-10-23 12:08:46,585 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.12 -c Bio/Align/_aligncore.c -o build/temp.linux-riscv64-cpython-312/Bio/Align/_aligncore.o
2025-10-23 12:08:47,934 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-riscv64-cpython-312/Bio/Align/_aligncore.o -L/usr/lib -o build/lib.linux-riscv64-cpython-312/Bio/Align/_aligncore.cpython-312-riscv64-linux-musl.so
2025-10-23 12:08:47,975 root INFO building 'Bio.cpairwise2' extension
2025-10-23 12:08:47,977 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.12 -c Bio/cpairwise2module.c -o build/temp.linux-riscv64-cpython-312/Bio/cpairwise2module.o
2025-10-23 12:08:49,620 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-riscv64-cpython-312/Bio/cpairwise2module.o -L/usr/lib -o build/lib.linux-riscv64-cpython-312/Bio/cpairwise2.cpython-312-riscv64-linux-musl.so
2025-10-23 12:08:49,662 root INFO building 'Bio.Nexus.cnexus' extension
2025-10-23 12:08:49,664 root INFO creating build/temp.linux-riscv64-cpython-312/Bio/Nexus
2025-10-23 12:08:49,666 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.12 -c Bio/Nexus/cnexus.c -o build/temp.linux-riscv64-cpython-312/Bio/Nexus/cnexus.o
2025-10-23 12:08:50,404 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-riscv64-cpython-312/Bio/Nexus/cnexus.o -L/usr/lib -o build/lib.linux-riscv64-cpython-312/Bio/Nexus/cnexus.cpython-312-riscv64-linux-musl.so
2025-10-23 12:08:50,444 root INFO building 'Bio.motifs._pwm' extension
2025-10-23 12:08:50,446 root INFO creating build/temp.linux-riscv64-cpython-312/Bio/motifs
2025-10-23 12:08:50,448 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.12 -c Bio/motifs/_pwm.c -o build/temp.linux-riscv64-cpython-312/Bio/motifs/_pwm.o
2025-10-23 12:08:51,406 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-riscv64-cpython-312/Bio/motifs/_pwm.o -L/usr/lib -o build/lib.linux-riscv64-cpython-312/Bio/motifs/_pwm.cpython-312-riscv64-linux-musl.so
2025-10-23 12:08:51,446 root INFO building 'Bio.Cluster._cluster' extension
2025-10-23 12:08:51,449 root INFO creating build/temp.linux-riscv64-cpython-312/Bio/Cluster
2025-10-23 12:08:51,451 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.12 -c Bio/Cluster/cluster.c -o build/temp.linux-riscv64-cpython-312/Bio/Cluster/cluster.o -DCLUSTER_USE_PYTHON_MEMORY
2025-10-23 12:09:03,424 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.12 -c Bio/Cluster/clustermodule.c -o build/temp.linux-riscv64-cpython-312/Bio/Cluster/clustermodule.o -DCLUSTER_USE_PYTHON_MEMORY
2025-10-23 12:09:06,907 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-riscv64-cpython-312/Bio/Cluster/cluster.o build/temp.linux-riscv64-cpython-312/Bio/Cluster/clustermodule.o -L/usr/lib -o build/lib.linux-riscv64-cpython-312/Bio/Cluster/_cluster.cpython-312-riscv64-linux-musl.so
2025-10-23 12:09:06,966 root INFO building 'Bio.PDB.ccealign' extension
2025-10-23 12:09:06,968 root INFO creating build/temp.linux-riscv64-cpython-312/Bio/PDB
2025-10-23 12:09:06,969 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.12 -c Bio/PDB/ccealignmodule.c -o build/temp.linux-riscv64-cpython-312/Bio/PDB/ccealignmodule.o
2025-10-23 12:09:08,691 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-riscv64-cpython-312/Bio/PDB/ccealignmodule.o -L/usr/lib -o build/lib.linux-riscv64-cpython-312/Bio/PDB/ccealign.cpython-312-riscv64-linux-musl.so
2025-10-23 12:09:08,732 root INFO building 'Bio.PDB.kdtrees' extension
2025-10-23 12:09:08,734 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.12 -c Bio/PDB/kdtrees.c -o build/temp.linux-riscv64-cpython-312/Bio/PDB/kdtrees.o
2025-10-23 12:09:10,815 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-riscv64-cpython-312/Bio/PDB/kdtrees.o -L/usr/lib -o build/lib.linux-riscv64-cpython-312/Bio/PDB/kdtrees.cpython-312-riscv64-linux-musl.so
2025-10-23 12:09:10,857 root INFO building 'Bio.PDB._bcif_helper' extension
2025-10-23 12:09:10,859 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.12 -c Bio/PDB/bcifhelpermodule.c -o build/temp.linux-riscv64-cpython-312/Bio/PDB/bcifhelpermodule.o
2025-10-23 12:09:11,740 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-riscv64-cpython-312/Bio/PDB/bcifhelpermodule.o -L/usr/lib -o build/lib.linux-riscv64-cpython-312/Bio/PDB/_bcif_helper.cpython-312-riscv64-linux-musl.so
2025-10-23 12:09:11,778 root INFO building 'Bio.SeqIO._twoBitIO' extension
2025-10-23 12:09:11,780 root INFO creating build/temp.linux-riscv64-cpython-312/Bio/SeqIO
2025-10-23 12:09:11,781 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.12 -c Bio/SeqIO/_twoBitIO.c -o build/temp.linux-riscv64-cpython-312/Bio/SeqIO/_twoBitIO.o
2025-10-23 12:09:12,808 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-riscv64-cpython-312/Bio/SeqIO/_twoBitIO.o -L/usr/lib -o build/lib.linux-riscv64-cpython-312/Bio/SeqIO/_twoBitIO.cpython-312-riscv64-linux-musl.so
2025-10-23 12:09:12,883 root INFO installing to build/bdist.linux-riscv64/wheel
2025-10-23 12:09:12,884 root INFO running install
2025-10-23 12:09:12,952 root INFO running install_lib
2025-10-23 12:09:12,972 root INFO creating build/bdist.linux-riscv64/wheel
2025-10-23 12:09:12,974 root INFO creating build/bdist.linux-riscv64/wheel/BioSQL
2025-10-23 12:09:12,975 root INFO copying build/lib.linux-riscv64-cpython-312/BioSQL/BioSeq.py -> build/bdist.linux-riscv64/wheel/./BioSQL
2025-10-23 12:09:12,976 root INFO copying build/lib.linux-riscv64-cpython-312/BioSQL/DBUtils.py -> build/bdist.linux-riscv64/wheel/./BioSQL
2025-10-23 12:09:12,978 root INFO copying build/lib.linux-riscv64-cpython-312/BioSQL/__init__.py -> build/bdist.linux-riscv64/wheel/./BioSQL
2025-10-23 12:09:12,978 root INFO copying build/lib.linux-riscv64-cpython-312/BioSQL/py.typed -> build/bdist.linux-riscv64/wheel/./BioSQL
2025-10-23 12:09:12,979 root INFO copying build/lib.linux-riscv64-cpython-312/BioSQL/BioSeqDatabase.py -> build/bdist.linux-riscv64/wheel/./BioSQL
2025-10-23 12:09:12,981 root INFO copying build/lib.linux-riscv64-cpython-312/BioSQL/Loader.py -> build/bdist.linux-riscv64/wheel/./BioSQL
2025-10-23 12:09:12,983 root INFO creating build/bdist.linux-riscv64/wheel/Bio
2025-10-23 12:09:12,984 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Affy
2025-10-23 12:09:12,985 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Affy/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/Affy
2025-10-23 12:09:12,986 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Affy/CelFile.py -> build/bdist.linux-riscv64/wheel/./Bio/Affy
2025-10-23 12:09:12,988 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/MaxEntropy.py -> build/bdist.linux-riscv64/wheel/./Bio
2025-10-23 12:09:12,989 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SeqRecord.py -> build/bdist.linux-riscv64/wheel/./Bio
2025-10-23 12:09:12,991 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Medline
2025-10-23 12:09:12,992 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Medline/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/Medline
2025-10-23 12:09:12,993 root INFO creating build/bdist.linux-riscv64/wheel/Bio/GenBank
2025-10-23 12:09:12,994 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/GenBank/Record.py -> build/bdist.linux-riscv64/wheel/./Bio/GenBank
2025-10-23 12:09:12,996 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/GenBank/Scanner.py -> build/bdist.linux-riscv64/wheel/./Bio/GenBank
2025-10-23 12:09:12,998 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/GenBank/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/GenBank
2025-10-23 12:09:12,999 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/GenBank/utils.py -> build/bdist.linux-riscv64/wheel/./Bio/GenBank
2025-10-23 12:09:13,001 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Data
2025-10-23 12:09:13,002 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Data/CodonTable.py -> build/bdist.linux-riscv64/wheel/./Bio/Data
2025-10-23 12:09:13,003 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Data/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/Data
2025-10-23 12:09:13,005 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Data/PDBData.py -> build/bdist.linux-riscv64/wheel/./Bio/Data
2025-10-23 12:09:13,006 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Data/IUPACData.py -> build/bdist.linux-riscv64/wheel/./Bio/Data
2025-10-23 12:09:13,008 root INFO creating build/bdist.linux-riscv64/wheel/Bio/AlignIO
2025-10-23 12:09:13,009 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/AlignIO/Interfaces.py -> build/bdist.linux-riscv64/wheel/./Bio/AlignIO
2025-10-23 12:09:13,010 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/AlignIO/MauveIO.py -> build/bdist.linux-riscv64/wheel/./Bio/AlignIO
2025-10-23 12:09:13,011 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/AlignIO/PhylipIO.py -> build/bdist.linux-riscv64/wheel/./Bio/AlignIO
2025-10-23 12:09:13,013 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/AlignIO/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/AlignIO
2025-10-23 12:09:13,014 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/AlignIO/MsfIO.py -> build/bdist.linux-riscv64/wheel/./Bio/AlignIO
2025-10-23 12:09:13,015 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/AlignIO/StockholmIO.py -> build/bdist.linux-riscv64/wheel/./Bio/AlignIO
2025-10-23 12:09:13,016 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/AlignIO/MafIO.py -> build/bdist.linux-riscv64/wheel/./Bio/AlignIO
2025-10-23 12:09:13,018 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/AlignIO/EmbossIO.py -> build/bdist.linux-riscv64/wheel/./Bio/AlignIO
2025-10-23 12:09:13,019 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/AlignIO/NexusIO.py -> build/bdist.linux-riscv64/wheel/./Bio/AlignIO
2025-10-23 12:09:13,020 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/AlignIO/FastaIO.py -> build/bdist.linux-riscv64/wheel/./Bio/AlignIO
2025-10-23 12:09:13,022 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/AlignIO/ClustalIO.py -> build/bdist.linux-riscv64/wheel/./Bio/AlignIO
2025-10-23 12:09:13,023 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Graphics
2025-10-23 12:09:13,024 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Graphics/ColorSpiral.py -> build/bdist.linux-riscv64/wheel/./Bio/Graphics
2025-10-23 12:09:13,026 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Graphics/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/Graphics
2025-10-23 12:09:13,027 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Graphics/KGML_vis.py -> build/bdist.linux-riscv64/wheel/./Bio/Graphics
2025-10-23 12:09:13,028 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Graphics/Distribution.py -> build/bdist.linux-riscv64/wheel/./Bio/Graphics
2025-10-23 12:09:13,029 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Graphics/BasicChromosome.py -> build/bdist.linux-riscv64/wheel/./Bio/Graphics
2025-10-23 12:09:13,030 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Graphics/DisplayRepresentation.py -> build/bdist.linux-riscv64/wheel/./Bio/Graphics
2025-10-23 12:09:13,032 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Graphics/Comparative.py -> build/bdist.linux-riscv64/wheel/./Bio/Graphics
2025-10-23 12:09:13,033 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Graphics/GenomeDiagram
2025-10-23 12:09:13,034 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Graphics/GenomeDiagram/_CrossLink.py -> build/bdist.linux-riscv64/wheel/./Bio/Graphics/GenomeDiagram
2025-10-23 12:09:13,035 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Graphics/GenomeDiagram/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/Graphics/GenomeDiagram
2025-10-23 12:09:13,037 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Graphics/GenomeDiagram/_AbstractDrawer.py -> build/bdist.linux-riscv64/wheel/./Bio/Graphics/GenomeDiagram
2025-10-23 12:09:13,038 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Graphics/GenomeDiagram/_FeatureSet.py -> build/bdist.linux-riscv64/wheel/./Bio/Graphics/GenomeDiagram
2025-10-23 12:09:13,039 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Graphics/GenomeDiagram/_Diagram.py -> build/bdist.linux-riscv64/wheel/./Bio/Graphics/GenomeDiagram
2025-10-23 12:09:13,040 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Graphics/GenomeDiagram/_Track.py -> build/bdist.linux-riscv64/wheel/./Bio/Graphics/GenomeDiagram
2025-10-23 12:09:13,041 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Graphics/GenomeDiagram/_CircularDrawer.py -> build/bdist.linux-riscv64/wheel/./Bio/Graphics/GenomeDiagram
2025-10-23 12:09:13,043 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Graphics/GenomeDiagram/_LinearDrawer.py -> build/bdist.linux-riscv64/wheel/./Bio/Graphics/GenomeDiagram
2025-10-23 12:09:13,044 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Graphics/GenomeDiagram/_GraphSet.py -> build/bdist.linux-riscv64/wheel/./Bio/Graphics/GenomeDiagram
2025-10-23 12:09:13,046 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Graphics/GenomeDiagram/_Colors.py -> build/bdist.linux-riscv64/wheel/./Bio/Graphics/GenomeDiagram
2025-10-23 12:09:13,047 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Graphics/GenomeDiagram/_Feature.py -> build/bdist.linux-riscv64/wheel/./Bio/Graphics/GenomeDiagram
2025-10-23 12:09:13,048 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Graphics/GenomeDiagram/_Graph.py -> build/bdist.linux-riscv64/wheel/./Bio/Graphics/GenomeDiagram
2025-10-23 12:09:13,050 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Align
2025-10-23 12:09:13,051 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/_codonaligner.c -> build/bdist.linux-riscv64/wheel/./Bio/Align
2025-10-23 12:09:13,053 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/exonerate.py -> build/bdist.linux-riscv64/wheel/./Bio/Align
2025-10-23 12:09:13,054 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/bigbed.py -> build/bdist.linux-riscv64/wheel/./Bio/Align
2025-10-23 12:09:13,056 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Align/substitution_matrices
2025-10-23 12:09:13,057 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices
2025-10-23 12:09:13,059 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Align/substitution_matrices/data
2025-10-23 12:09:13,060 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data/BLOSUM50 -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2025-10-23 12:09:13,061 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data/MEGABLAST -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2025-10-23 12:09:13,062 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data/BLASTN -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2025-10-23 12:09:13,063 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data/MCLACHLAN -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2025-10-23 12:09:13,064 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data/JONES -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2025-10-23 12:09:13,065 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data/BLOSUM90 -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2025-10-23 12:09:13,066 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data/GENETIC -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2025-10-23 12:09:13,067 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data/DAYHOFF -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2025-10-23 12:09:13,068 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data/BENNER74 -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2025-10-23 12:09:13,069 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data/GONNET1992 -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2025-10-23 12:09:13,070 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data/RAO -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2025-10-23 12:09:13,071 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data/BENNER22 -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2025-10-23 12:09:13,072 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data/RISLER -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2025-10-23 12:09:13,073 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data/MDM78 -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2025-10-23 12:09:13,074 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data/NUC.4.4 -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2025-10-23 12:09:13,075 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data/PAM70 -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2025-10-23 12:09:13,076 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data/JOHNSON -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2025-10-23 12:09:13,077 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data/LEVIN -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2025-10-23 12:09:13,078 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data/HOXD70 -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2025-10-23 12:09:13,079 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data/PAM30 -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2025-10-23 12:09:13,080 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data/STR -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2025-10-23 12:09:13,081 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data/TRANS -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2025-10-23 12:09:13,082 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data/BLOSUM80 -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2025-10-23 12:09:13,083 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data/BENNER6 -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2025-10-23 12:09:13,084 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data/SCHNEIDER -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2025-10-23 12:09:13,085 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data/BLASTP -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2025-10-23 12:09:13,087 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data/BLOSUM62 -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2025-10-23 12:09:13,088 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data/BLOSUM45 -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2025-10-23 12:09:13,089 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data/FENG -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2025-10-23 12:09:13,090 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/substitution_matrices/data/PAM250 -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2025-10-23 12:09:13,091 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/hhr.py -> build/bdist.linux-riscv64/wheel/./Bio/Align
2025-10-23 12:09:13,092 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/chain.py -> build/bdist.linux-riscv64/wheel/./Bio/Align
2025-10-23 12:09:13,093 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/Align
2025-10-23 12:09:13,095 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/phylip.py -> build/bdist.linux-riscv64/wheel/./Bio/Align
2025-10-23 12:09:13,097 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/bed.py -> build/bdist.linux-riscv64/wheel/./Bio/Align
2025-10-23 12:09:13,099 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Align/Applications
2025-10-23 12:09:13,100 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/Applications/_Probcons.py -> build/bdist.linux-riscv64/wheel/./Bio/Align/Applications
2025-10-23 12:09:13,101 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/Applications/_Muscle.py -> build/bdist.linux-riscv64/wheel/./Bio/Align/Applications
2025-10-23 12:09:13,102 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/Applications/_MSAProbs.py -> build/bdist.linux-riscv64/wheel/./Bio/Align/Applications
2025-10-23 12:09:13,103 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/Applications/_ClustalOmega.py -> build/bdist.linux-riscv64/wheel/./Bio/Align/Applications
2025-10-23 12:09:13,105 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/Applications/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/Align/Applications
2025-10-23 12:09:13,106 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/Applications/_Clustalw.py -> build/bdist.linux-riscv64/wheel/./Bio/Align/Applications
2025-10-23 12:09:13,107 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/Applications/_Prank.py -> build/bdist.linux-riscv64/wheel/./Bio/Align/Applications
2025-10-23 12:09:13,108 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/Applications/_Mafft.py -> build/bdist.linux-riscv64/wheel/./Bio/Align/Applications
2025-10-23 12:09:13,109 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/Applications/_TCoffee.py -> build/bdist.linux-riscv64/wheel/./Bio/Align/Applications
2025-10-23 12:09:13,110 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/Applications/_Dialign.py -> build/bdist.linux-riscv64/wheel/./Bio/Align/Applications
2025-10-23 12:09:13,111 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/_pairwisealigner.c -> build/bdist.linux-riscv64/wheel/./Bio/Align
2025-10-23 12:09:13,114 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/AlignInfo.py -> build/bdist.linux-riscv64/wheel/./Bio/Align
2025-10-23 12:09:13,115 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/bigpsl.py -> build/bdist.linux-riscv64/wheel/./Bio/Align
2025-10-23 12:09:13,117 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/interfaces.py -> build/bdist.linux-riscv64/wheel/./Bio/Align
2025-10-23 12:09:13,118 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/emboss.py -> build/bdist.linux-riscv64/wheel/./Bio/Align
2025-10-23 12:09:13,119 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/analysis.py -> build/bdist.linux-riscv64/wheel/./Bio/Align
2025-10-23 12:09:13,120 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/_aligncore.cpython-312-riscv64-linux-musl.so -> build/bdist.linux-riscv64/wheel/./Bio/Align
2025-10-23 12:09:13,122 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/bigmaf.py -> build/bdist.linux-riscv64/wheel/./Bio/Align
2025-10-23 12:09:13,123 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/stockholm.py -> build/bdist.linux-riscv64/wheel/./Bio/Align
2025-10-23 12:09:13,124 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/_codonaligner.cpython-312-riscv64-linux-musl.so -> build/bdist.linux-riscv64/wheel/./Bio/Align
2025-10-23 12:09:13,125 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/clustal.py -> build/bdist.linux-riscv64/wheel/./Bio/Align
2025-10-23 12:09:13,126 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/fasta.py -> build/bdist.linux-riscv64/wheel/./Bio/Align
2025-10-23 12:09:13,127 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/maf.py -> build/bdist.linux-riscv64/wheel/./Bio/Align
2025-10-23 12:09:13,129 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/_aligncore.c -> build/bdist.linux-riscv64/wheel/./Bio/Align
2025-10-23 12:09:13,130 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/nexus.py -> build/bdist.linux-riscv64/wheel/./Bio/Align
2025-10-23 12:09:13,131 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/mauve.py -> build/bdist.linux-riscv64/wheel/./Bio/Align
2025-10-23 12:09:13,132 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/sam.py -> build/bdist.linux-riscv64/wheel/./Bio/Align
2025-10-23 12:09:13,134 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/psl.py -> build/bdist.linux-riscv64/wheel/./Bio/Align
2025-10-23 12:09:13,135 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/a2m.py -> build/bdist.linux-riscv64/wheel/./Bio/Align
2025-10-23 12:09:13,137 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/_pairwisealigner.cpython-312-riscv64-linux-musl.so -> build/bdist.linux-riscv64/wheel/./Bio/Align
2025-10-23 12:09:13,139 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/tabular.py -> build/bdist.linux-riscv64/wheel/./Bio/Align
2025-10-23 12:09:13,140 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Align/msf.py -> build/bdist.linux-riscv64/wheel/./Bio/Align
2025-10-23 12:09:13,141 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/cpairwise2module.c -> build/bdist.linux-riscv64/wheel/./Bio
2025-10-23 12:09:13,142 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Seq.py -> build/bdist.linux-riscv64/wheel/./Bio
2025-10-23 12:09:13,145 root INFO creating build/bdist.linux-riscv64/wheel/Bio/NMR
2025-10-23 12:09:13,146 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/NMR/NOEtools.py -> build/bdist.linux-riscv64/wheel/./Bio/NMR
2025-10-23 12:09:13,147 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/NMR/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/NMR
2025-10-23 12:09:13,148 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/NMR/xpktools.py -> build/bdist.linux-riscv64/wheel/./Bio/NMR
2025-10-23 12:09:13,150 root INFO creating build/bdist.linux-riscv64/wheel/Bio/SVDSuperimposer
2025-10-23 12:09:13,151 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SVDSuperimposer/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/SVDSuperimposer
2025-10-23 12:09:13,153 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/bgzf.py -> build/bdist.linux-riscv64/wheel/./Bio
2025-10-23 12:09:13,154 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio
2025-10-23 12:09:13,155 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SeqFeature.py -> build/bdist.linux-riscv64/wheel/./Bio
2025-10-23 12:09:13,157 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Nexus
2025-10-23 12:09:13,159 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Nexus/cnexus.cpython-312-riscv64-linux-musl.so -> build/bdist.linux-riscv64/wheel/./Bio/Nexus
2025-10-23 12:09:13,160 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Nexus/Nodes.py -> build/bdist.linux-riscv64/wheel/./Bio/Nexus
2025-10-23 12:09:13,161 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Nexus/Nexus.py -> build/bdist.linux-riscv64/wheel/./Bio/Nexus
2025-10-23 12:09:13,163 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Nexus/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/Nexus
2025-10-23 12:09:13,164 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Nexus/cnexus.c -> build/bdist.linux-riscv64/wheel/./Bio/Nexus
2025-10-23 12:09:13,165 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Nexus/StandardData.py -> build/bdist.linux-riscv64/wheel/./Bio/Nexus
2025-10-23 12:09:13,166 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Nexus/Trees.py -> build/bdist.linux-riscv64/wheel/./Bio/Nexus
2025-10-23 12:09:13,169 root INFO creating build/bdist.linux-riscv64/wheel/Bio/SearchIO
2025-10-23 12:09:13,170 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SearchIO/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO
2025-10-23 12:09:13,171 root INFO creating build/bdist.linux-riscv64/wheel/Bio/SearchIO/HHsuiteIO
2025-10-23 12:09:13,172 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SearchIO/HHsuiteIO/hhsuite2_text.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO/HHsuiteIO
2025-10-23 12:09:13,173 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SearchIO/HHsuiteIO/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO/HHsuiteIO
2025-10-23 12:09:13,174 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SearchIO/BlatIO.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO
2025-10-23 12:09:13,176 root INFO creating build/bdist.linux-riscv64/wheel/Bio/SearchIO/HmmerIO
2025-10-23 12:09:13,177 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SearchIO/HmmerIO/hmmer3_domtab.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO/HmmerIO
2025-10-23 12:09:13,178 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SearchIO/HmmerIO/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO/HmmerIO
2025-10-23 12:09:13,179 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SearchIO/HmmerIO/hmmer2_text.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO/HmmerIO
2025-10-23 12:09:13,181 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SearchIO/HmmerIO/hmmer3_text.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO/HmmerIO
2025-10-23 12:09:13,182 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SearchIO/HmmerIO/hmmer3_tab.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO/HmmerIO
2025-10-23 12:09:13,183 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SearchIO/HmmerIO/_base.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO/HmmerIO
2025-10-23 12:09:13,184 root INFO creating build/bdist.linux-riscv64/wheel/Bio/SearchIO/BlastIO
2025-10-23 12:09:13,185 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SearchIO/BlastIO/blast_tab.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO/BlastIO
2025-10-23 12:09:13,187 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SearchIO/BlastIO/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO/BlastIO
2025-10-23 12:09:13,188 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SearchIO/BlastIO/blast_xml.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO/BlastIO
2025-10-23 12:09:13,190 root INFO creating build/bdist.linux-riscv64/wheel/Bio/SearchIO/InterproscanIO
2025-10-23 12:09:13,191 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SearchIO/InterproscanIO/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO/InterproscanIO
2025-10-23 12:09:13,192 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SearchIO/InterproscanIO/interproscan_xml.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO/InterproscanIO
2025-10-23 12:09:13,193 root INFO creating build/bdist.linux-riscv64/wheel/Bio/SearchIO/_model
2025-10-23 12:09:13,194 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SearchIO/_model/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO/_model
2025-10-23 12:09:13,195 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SearchIO/_model/_base.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO/_model
2025-10-23 12:09:13,197 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SearchIO/_model/query.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO/_model
2025-10-23 12:09:13,198 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SearchIO/_model/hsp.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO/_model
2025-10-23 12:09:13,199 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SearchIO/_model/hit.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO/_model
2025-10-23 12:09:13,201 root INFO creating build/bdist.linux-riscv64/wheel/Bio/SearchIO/ExonerateIO
2025-10-23 12:09:13,202 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SearchIO/ExonerateIO/exonerate_vulgar.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO/ExonerateIO
2025-10-23 12:09:13,203 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SearchIO/ExonerateIO/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO/ExonerateIO
2025-10-23 12:09:13,204 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SearchIO/ExonerateIO/exonerate_text.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO/ExonerateIO
2025-10-23 12:09:13,206 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SearchIO/ExonerateIO/_base.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO/ExonerateIO
2025-10-23 12:09:13,207 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SearchIO/ExonerateIO/exonerate_cigar.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO/ExonerateIO
2025-10-23 12:09:13,208 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SearchIO/_index.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO
2025-10-23 12:09:13,209 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SearchIO/FastaIO.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO
2025-10-23 12:09:13,210 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SearchIO/_utils.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO
2025-10-23 12:09:13,212 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Blast
2025-10-23 12:09:13,213 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Blast/NCBIWWW.py -> build/bdist.linux-riscv64/wheel/./Bio/Blast
2025-10-23 12:09:13,214 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Blast/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/Blast
2025-10-23 12:09:13,216 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Blast/_parser.py -> build/bdist.linux-riscv64/wheel/./Bio/Blast
2025-10-23 12:09:13,218 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Blast/Applications.py -> build/bdist.linux-riscv64/wheel/./Bio/Blast
2025-10-23 12:09:13,219 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Blast/_writers.py -> build/bdist.linux-riscv64/wheel/./Bio/Blast
2025-10-23 12:09:13,221 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Blast/NCBIXML.py -> build/bdist.linux-riscv64/wheel/./Bio/Blast
2025-10-23 12:09:13,223 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Geo
2025-10-23 12:09:13,224 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Geo/Record.py -> build/bdist.linux-riscv64/wheel/./Bio/Geo
2025-10-23 12:09:13,225 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Geo/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/Geo
2025-10-23 12:09:13,226 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/NaiveBayes.py -> build/bdist.linux-riscv64/wheel/./Bio
2025-10-23 12:09:13,227 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/kNN.py -> build/bdist.linux-riscv64/wheel/./Bio
2025-10-23 12:09:13,229 root INFO creating build/bdist.linux-riscv64/wheel/Bio/UniProt
2025-10-23 12:09:13,230 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/UniProt/GOA.py -> build/bdist.linux-riscv64/wheel/./Bio/UniProt
2025-10-23 12:09:13,231 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/UniProt/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/UniProt
2025-10-23 12:09:13,232 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/File.py -> build/bdist.linux-riscv64/wheel/./Bio
2025-10-23 12:09:13,233 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/py.typed -> build/bdist.linux-riscv64/wheel/./Bio
2025-10-23 12:09:13,235 root INFO creating build/bdist.linux-riscv64/wheel/Bio/SCOP
2025-10-23 12:09:13,236 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SCOP/Raf.py -> build/bdist.linux-riscv64/wheel/./Bio/SCOP
2025-10-23 12:09:13,237 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SCOP/Residues.py -> build/bdist.linux-riscv64/wheel/./Bio/SCOP
2025-10-23 12:09:13,238 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SCOP/Cla.py -> build/bdist.linux-riscv64/wheel/./Bio/SCOP
2025-10-23 12:09:13,239 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SCOP/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/SCOP
2025-10-23 12:09:13,240 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SCOP/Dom.py -> build/bdist.linux-riscv64/wheel/./Bio/SCOP
2025-10-23 12:09:13,241 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SCOP/Hie.py -> build/bdist.linux-riscv64/wheel/./Bio/SCOP
2025-10-23 12:09:13,242 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SCOP/Des.py -> build/bdist.linux-riscv64/wheel/./Bio/SCOP
2025-10-23 12:09:13,243 root INFO creating build/bdist.linux-riscv64/wheel/Bio/UniGene
2025-10-23 12:09:13,244 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/UniGene/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/UniGene
2025-10-23 12:09:13,246 root INFO creating build/bdist.linux-riscv64/wheel/Bio/motifs
2025-10-23 12:09:13,247 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/motifs/pfm.py -> build/bdist.linux-riscv64/wheel/./Bio/motifs
2025-10-23 12:09:13,248 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/motifs/thresholds.py -> build/bdist.linux-riscv64/wheel/./Bio/motifs
2025-10-23 12:09:13,250 root INFO creating build/bdist.linux-riscv64/wheel/Bio/motifs/jaspar
2025-10-23 12:09:13,251 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/motifs/jaspar/db.py -> build/bdist.linux-riscv64/wheel/./Bio/motifs/jaspar
2025-10-23 12:09:13,252 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/motifs/jaspar/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/motifs/jaspar
2025-10-23 12:09:13,253 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/motifs/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/motifs
2025-10-23 12:09:13,255 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/motifs/minimal.py -> build/bdist.linux-riscv64/wheel/./Bio/motifs
2025-10-23 12:09:13,256 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/motifs/meme.py -> build/bdist.linux-riscv64/wheel/./Bio/motifs
2025-10-23 12:09:13,257 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/motifs/alignace.py -> build/bdist.linux-riscv64/wheel/./Bio/motifs
2025-10-23 12:09:13,258 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/motifs/matrix.py -> build/bdist.linux-riscv64/wheel/./Bio/motifs
2025-10-23 12:09:13,260 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/motifs/clusterbuster.py -> build/bdist.linux-riscv64/wheel/./Bio/motifs
2025-10-23 12:09:13,261 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/motifs/_pwm.cpython-312-riscv64-linux-musl.so -> build/bdist.linux-riscv64/wheel/./Bio/motifs
2025-10-23 12:09:13,262 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/motifs/transfac.py -> build/bdist.linux-riscv64/wheel/./Bio/motifs
2025-10-23 12:09:13,263 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/motifs/mast.py -> build/bdist.linux-riscv64/wheel/./Bio/motifs
2025-10-23 12:09:13,264 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/motifs/xms.py -> build/bdist.linux-riscv64/wheel/./Bio/motifs
2025-10-23 12:09:13,265 root INFO creating build/bdist.linux-riscv64/wheel/Bio/motifs/applications
2025-10-23 12:09:13,266 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/motifs/applications/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/motifs/applications
2025-10-23 12:09:13,268 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/motifs/applications/_xxmotif.py -> build/bdist.linux-riscv64/wheel/./Bio/motifs/applications
2025-10-23 12:09:13,269 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/motifs/_pwm.c -> build/bdist.linux-riscv64/wheel/./Bio/motifs
2025-10-23 12:09:13,271 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Sequencing
2025-10-23 12:09:13,272 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Sequencing/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/Sequencing
2025-10-23 12:09:13,273 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Sequencing/Applications
2025-10-23 12:09:13,274 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Sequencing/Applications/_samtools.py -> build/bdist.linux-riscv64/wheel/./Bio/Sequencing/Applications
2025-10-23 12:09:13,276 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Sequencing/Applications/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/Sequencing/Applications
2025-10-23 12:09:13,277 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Sequencing/Applications/_bwa.py -> build/bdist.linux-riscv64/wheel/./Bio/Sequencing/Applications
2025-10-23 12:09:13,278 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Sequencing/Applications/_Novoalign.py -> build/bdist.linux-riscv64/wheel/./Bio/Sequencing/Applications
2025-10-23 12:09:13,280 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Sequencing/Ace.py -> build/bdist.linux-riscv64/wheel/./Bio/Sequencing
2025-10-23 12:09:13,281 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Sequencing/Phd.py -> build/bdist.linux-riscv64/wheel/./Bio/Sequencing
2025-10-23 12:09:13,282 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Restriction
2025-10-23 12:09:13,283 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Restriction/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/Restriction
2025-10-23 12:09:13,285 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Restriction/PrintFormat.py -> build/bdist.linux-riscv64/wheel/./Bio/Restriction
2025-10-23 12:09:13,286 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Restriction/Restriction_Dictionary.py -> build/bdist.linux-riscv64/wheel/./Bio/Restriction
2025-10-23 12:09:13,290 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Restriction/Restriction.py -> build/bdist.linux-riscv64/wheel/./Bio/Restriction
2025-10-23 12:09:13,293 root INFO creating build/bdist.linux-riscv64/wheel/Bio/KEGG
2025-10-23 12:09:13,294 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/KEGG/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/KEGG
2025-10-23 12:09:13,295 root INFO creating build/bdist.linux-riscv64/wheel/Bio/KEGG/KGML
2025-10-23 12:09:13,296 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/KEGG/KGML/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/KEGG/KGML
2025-10-23 12:09:13,297 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/KEGG/KGML/KGML_parser.py -> build/bdist.linux-riscv64/wheel/./Bio/KEGG/KGML
2025-10-23 12:09:13,299 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/KEGG/KGML/KGML_pathway.py -> build/bdist.linux-riscv64/wheel/./Bio/KEGG/KGML
2025-10-23 12:09:13,300 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/KEGG/REST.py -> build/bdist.linux-riscv64/wheel/./Bio/KEGG
2025-10-23 12:09:13,302 root INFO creating build/bdist.linux-riscv64/wheel/Bio/KEGG/Enzyme
2025-10-23 12:09:13,303 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/KEGG/Enzyme/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/KEGG/Enzyme
2025-10-23 12:09:13,304 root INFO creating build/bdist.linux-riscv64/wheel/Bio/KEGG/Gene
2025-10-23 12:09:13,305 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/KEGG/Gene/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/KEGG/Gene
2025-10-23 12:09:13,307 root INFO creating build/bdist.linux-riscv64/wheel/Bio/KEGG/Map
2025-10-23 12:09:13,308 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/KEGG/Map/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/KEGG/Map
2025-10-23 12:09:13,309 root INFO creating build/bdist.linux-riscv64/wheel/Bio/KEGG/Compound
2025-10-23 12:09:13,310 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/KEGG/Compound/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/KEGG/Compound
2025-10-23 12:09:13,312 root INFO creating build/bdist.linux-riscv64/wheel/Bio/phenotype
2025-10-23 12:09:13,313 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/phenotype/phen_micro.py -> build/bdist.linux-riscv64/wheel/./Bio/phenotype
2025-10-23 12:09:13,314 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/phenotype/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/phenotype
2025-10-23 12:09:13,316 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/phenotype/pm_fitting.py -> build/bdist.linux-riscv64/wheel/./Bio/phenotype
2025-10-23 12:09:13,317 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Phylo
2025-10-23 12:09:13,318 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Phylo/NeXMLIO.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo
2025-10-23 12:09:13,319 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Phylo/CDAOIO.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo
2025-10-23 12:09:13,320 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Phylo/_cdao_owl.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo
2025-10-23 12:09:13,322 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Phylo/CDAO.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo
2025-10-23 12:09:13,323 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Phylo/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo
2025-10-23 12:09:13,324 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Phylo/TreeConstruction.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo
2025-10-23 12:09:13,326 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Phylo/PAML
2025-10-23 12:09:13,327 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Phylo/PAML/_paml.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo/PAML
2025-10-23 12:09:13,328 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Phylo/PAML/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo/PAML
2025-10-23 12:09:13,329 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Phylo/PAML/chi2.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo/PAML
2025-10-23 12:09:13,330 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Phylo/PAML/codeml.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo/PAML
2025-10-23 12:09:13,331 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Phylo/PAML/_parse_baseml.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo/PAML
2025-10-23 12:09:13,333 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Phylo/PAML/_parse_codeml.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo/PAML
2025-10-23 12:09:13,334 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Phylo/PAML/baseml.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo/PAML
2025-10-23 12:09:13,335 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Phylo/PAML/yn00.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo/PAML
2025-10-23 12:09:13,336 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Phylo/PAML/_parse_yn00.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo/PAML
2025-10-23 12:09:13,338 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Phylo/Applications
2025-10-23 12:09:13,339 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Phylo/Applications/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo/Applications
2025-10-23 12:09:13,340 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Phylo/Applications/_Phyml.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo/Applications
2025-10-23 12:09:13,341 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Phylo/Applications/_Raxml.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo/Applications
2025-10-23 12:09:13,342 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Phylo/Applications/_Fasttree.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo/Applications
2025-10-23 12:09:13,344 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Phylo/Newick.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo
2025-10-23 12:09:13,345 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Phylo/PhyloXML.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo
2025-10-23 12:09:13,346 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Phylo/NexusIO.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo
2025-10-23 12:09:13,347 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Phylo/Consensus.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo
2025-10-23 12:09:13,349 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Phylo/_io.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo
2025-10-23 12:09:13,350 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Phylo/BaseTree.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo
2025-10-23 12:09:13,351 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Phylo/_utils.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo
2025-10-23 12:09:13,353 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Phylo/PhyloXMLIO.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo
2025-10-23 12:09:13,354 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Phylo/NewickIO.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo
2025-10-23 12:09:13,355 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Phylo/NeXML.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo
2025-10-23 12:09:13,357 root INFO creating build/bdist.linux-riscv64/wheel/Bio/codonalign
2025-10-23 12:09:13,358 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/codonalign/codonalignment.py -> build/bdist.linux-riscv64/wheel/./Bio/codonalign
2025-10-23 12:09:13,359 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/codonalign/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/codonalign
2025-10-23 12:09:13,360 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/codonalign/codonseq.py -> build/bdist.linux-riscv64/wheel/./Bio/codonalign
2025-10-23 12:09:13,362 root INFO creating build/bdist.linux-riscv64/wheel/Bio/HMM
2025-10-23 12:09:13,363 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/HMM/Utilities.py -> build/bdist.linux-riscv64/wheel/./Bio/HMM
2025-10-23 12:09:13,364 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/HMM/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/HMM
2025-10-23 12:09:13,365 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/HMM/DynamicProgramming.py -> build/bdist.linux-riscv64/wheel/./Bio/HMM
2025-10-23 12:09:13,366 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/HMM/MarkovModel.py -> build/bdist.linux-riscv64/wheel/./Bio/HMM
2025-10-23 12:09:13,367 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/HMM/Trainer.py -> build/bdist.linux-riscv64/wheel/./Bio/HMM
2025-10-23 12:09:13,369 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/MarkovModel.py -> build/bdist.linux-riscv64/wheel/./Bio
2025-10-23 12:09:13,371 root INFO creating build/bdist.linux-riscv64/wheel/Bio/TogoWS
2025-10-23 12:09:13,372 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/TogoWS/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/TogoWS
2025-10-23 12:09:13,373 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/LogisticRegression.py -> build/bdist.linux-riscv64/wheel/./Bio
2025-10-23 12:09:13,374 root INFO creating build/bdist.linux-riscv64/wheel/Bio/SeqUtils
2025-10-23 12:09:13,375 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SeqUtils/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqUtils
2025-10-23 12:09:13,377 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SeqUtils/CheckSum.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqUtils
2025-10-23 12:09:13,378 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SeqUtils/lcc.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqUtils
2025-10-23 12:09:13,379 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SeqUtils/MeltingTemp.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqUtils
2025-10-23 12:09:13,380 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SeqUtils/ProtParamData.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqUtils
2025-10-23 12:09:13,382 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SeqUtils/IsoelectricPoint.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqUtils
2025-10-23 12:09:13,383 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SeqUtils/ProtParam.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqUtils
2025-10-23 12:09:13,384 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Cluster
2025-10-23 12:09:13,385 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Cluster/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/Cluster
2025-10-23 12:09:13,387 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Cluster/_cluster.cpython-312-riscv64-linux-musl.so -> build/bdist.linux-riscv64/wheel/./Bio/Cluster
2025-10-23 12:09:13,389 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Cluster/cluster.h -> build/bdist.linux-riscv64/wheel/./Bio/Cluster
2025-10-23 12:09:13,390 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Cluster/cluster.c -> build/bdist.linux-riscv64/wheel/./Bio/Cluster
2025-10-23 12:09:13,392 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Cluster/clustermodule.c -> build/bdist.linux-riscv64/wheel/./Bio/Cluster
2025-10-23 12:09:13,394 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Alphabet
2025-10-23 12:09:13,395 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Alphabet/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/Alphabet
2025-10-23 12:09:13,397 root INFO creating build/bdist.linux-riscv64/wheel/Bio/SwissProt
2025-10-23 12:09:13,398 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SwissProt/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/SwissProt
2025-10-23 12:09:13,399 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SwissProt/KeyWList.py -> build/bdist.linux-riscv64/wheel/./Bio/SwissProt
2025-10-23 12:09:13,401 root INFO creating build/bdist.linux-riscv64/wheel/Bio/ExPASy
2025-10-23 12:09:13,402 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/ExPASy/cellosaurus.py -> build/bdist.linux-riscv64/wheel/./Bio/ExPASy
2025-10-23 12:09:13,403 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/ExPASy/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/ExPASy
2025-10-23 12:09:13,404 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/ExPASy/Enzyme.py -> build/bdist.linux-riscv64/wheel/./Bio/ExPASy
2025-10-23 12:09:13,405 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/ExPASy/Prodoc.py -> build/bdist.linux-riscv64/wheel/./Bio/ExPASy
2025-10-23 12:09:13,406 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/ExPASy/ScanProsite.py -> build/bdist.linux-riscv64/wheel/./Bio/ExPASy
2025-10-23 12:09:13,407 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/ExPASy/Prosite.py -> build/bdist.linux-riscv64/wheel/./Bio/ExPASy
2025-10-23 12:09:13,409 root INFO creating build/bdist.linux-riscv64/wheel/Bio/SeqIO
2025-10-23 12:09:13,410 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SeqIO/PdbIO.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqIO
2025-10-23 12:09:13,411 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SeqIO/Interfaces.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqIO
2025-10-23 12:09:13,413 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SeqIO/TwoBitIO.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqIO
2025-10-23 12:09:13,414 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SeqIO/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqIO
2025-10-23 12:09:13,415 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SeqIO/SffIO.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqIO
2025-10-23 12:09:13,417 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SeqIO/PirIO.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqIO
2025-10-23 12:09:13,418 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SeqIO/IgIO.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqIO
2025-10-23 12:09:13,419 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SeqIO/QualityIO.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqIO
2025-10-23 12:09:13,421 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SeqIO/SeqXmlIO.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqIO
2025-10-23 12:09:13,422 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SeqIO/AbiIO.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqIO
2025-10-23 12:09:13,423 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SeqIO/GckIO.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqIO
2025-10-23 12:09:13,424 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SeqIO/_twoBitIO.cpython-312-riscv64-linux-musl.so -> build/bdist.linux-riscv64/wheel/./Bio/SeqIO
2025-10-23 12:09:13,426 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SeqIO/AceIO.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqIO
2025-10-23 12:09:13,427 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SeqIO/InsdcIO.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqIO
2025-10-23 12:09:13,429 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SeqIO/_index.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqIO
2025-10-23 12:09:13,430 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SeqIO/TabIO.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqIO
2025-10-23 12:09:13,431 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SeqIO/GfaIO.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqIO
2025-10-23 12:09:13,432 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SeqIO/FastaIO.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqIO
2025-10-23 12:09:13,434 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SeqIO/SnapGeneIO.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqIO
2025-10-23 12:09:13,435 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SeqIO/NibIO.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqIO
2025-10-23 12:09:13,436 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SeqIO/SwissIO.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqIO
2025-10-23 12:09:13,437 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SeqIO/PhdIO.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqIO
2025-10-23 12:09:13,439 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SeqIO/XdnaIO.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqIO
2025-10-23 12:09:13,440 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SeqIO/_twoBitIO.c -> build/bdist.linux-riscv64/wheel/./Bio/SeqIO
2025-10-23 12:09:13,441 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/SeqIO/UniprotIO.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqIO
2025-10-23 12:09:13,443 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Compass
2025-10-23 12:09:13,444 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Compass/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/Compass
2025-10-23 12:09:13,446 root INFO creating build/bdist.linux-riscv64/wheel/Bio/PopGen
2025-10-23 12:09:13,447 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PopGen/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/PopGen
2025-10-23 12:09:13,448 root INFO creating build/bdist.linux-riscv64/wheel/Bio/PopGen/GenePop
2025-10-23 12:09:13,449 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PopGen/GenePop/EasyController.py -> build/bdist.linux-riscv64/wheel/./Bio/PopGen/GenePop
2025-10-23 12:09:13,451 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PopGen/GenePop/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/PopGen/GenePop
2025-10-23 12:09:13,452 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PopGen/GenePop/FileParser.py -> build/bdist.linux-riscv64/wheel/./Bio/PopGen/GenePop
2025-10-23 12:09:13,453 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PopGen/GenePop/Controller.py -> build/bdist.linux-riscv64/wheel/./Bio/PopGen/GenePop
2025-10-23 12:09:13,454 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PopGen/GenePop/LargeFileParser.py -> build/bdist.linux-riscv64/wheel/./Bio/PopGen/GenePop
2025-10-23 12:09:13,456 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Entrez
2025-10-23 12:09:13,457 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/Entrez
2025-10-23 12:09:13,458 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/Parser.py -> build/bdist.linux-riscv64/wheel/./Bio/Entrez
2025-10-23 12:09:13,460 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Entrez/XSDs
2025-10-23 12:09:13,461 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/XSDs/NCBI_BlastOutput2.xsd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/XSDs
2025-10-23 12:09:13,462 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/XSDs/NCBI_BlastOutput2.mod.xsd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/XSDs
2025-10-23 12:09:13,463 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/XSDs/IPGReportSet.xsd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/XSDs
2025-10-23 12:09:13,466 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Entrez/DTDs
2025-10-23 12:09:13,467 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/Docsum_3_4.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,468 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_ID2Access.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,469 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_Seqloc.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,470 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/bookdoc_120101.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,471 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/format.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,473 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/Docsum_3_2.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,474 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_ScoreMat.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,475 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/taxon.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,476 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/JATS-format1-3.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,477 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/mathmlsetup.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,479 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_FeatDef.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,480 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/JATS-list1-3.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,481 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_Seqset.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,483 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/common.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,485 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_GBSeq.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,486 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/Docsum_3_2.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,488 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/Docsum_3_4.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,489 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/nlmmedlinecitationset_130501.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,491 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_Sequence.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,492 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_Cdd.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,493 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_BioTree.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,494 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/isopub.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,496 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/mathml-in-pubmed.mod -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,497 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_SeqTable.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,498 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/Docsum_3_0.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,499 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_Organism.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,500 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/MMDB.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,501 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_Seq_split.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,502 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/pubmed_090101.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,503 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/references.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,505 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_TxInit.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,506 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_Medlars.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,507 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/BITS-question-answer2.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,508 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/isocyr1.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,509 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/pubmed_150101.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,510 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/chars.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,512 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/math.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,513 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/pubmed_180101.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,514 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_General.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,515 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_Mim.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,517 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/MMDB_Chemical_graph.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,518 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/default-mixes.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,519 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_Blast4.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,521 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/JATS-link1-3.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,522 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/esearch.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,523 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/EMBL_General.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,525 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/bookdoc_150101.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
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2025-10-23 12:09:13,528 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/nlmmedline_090101.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,529 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_Remap.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,530 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/JATS-mathml3-mathmlsetup1-3.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,531 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/JATS-common1-3.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,534 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/eSummary_041029.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
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2025-10-23 12:09:13,539 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/XHTMLtablesetup.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,540 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/JATS-notat1-3.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,541 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/isoamsc.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,542 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_BlastDL.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,543 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/nlmmedlinecitationset_120101.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
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2025-10-23 12:09:13,561 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/JATS-default-classes1-3.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
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2025-10-23 12:09:13,565 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/EMBL_General.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
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2025-10-23 12:09:13,570 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/xhtml-table-1.mod -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,572 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/JATS-math1-3.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,573 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/nlmmedlinecitation_080101.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
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2025-10-23 12:09:13,578 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_Seqalign.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
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2025-10-23 12:09:13,584 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/isotech.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
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2025-10-23 12:09:13,592 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_Mime.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
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2025-10-23 12:09:13,596 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/nlmmedlinecitationset_110101.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
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2025-10-23 12:09:13,616 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_MedArchive.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
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2025-10-23 12:09:13,620 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_Protein.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
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2025-10-23 12:09:13,624 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/MMDB_Structural_model.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
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2025-10-23 12:09:13,627 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/isomopf.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,628 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_General.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
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2025-10-23 12:09:13,652 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/backmatter.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
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2025-10-23 12:09:13,656 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_RNA.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
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2025-10-23 12:09:13,658 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/bookdoc_110101.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,659 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/eSpell.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,661 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/PIR_General.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,662 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/esummary_gene.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,663 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/nlmmedlinecitation_090101.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,664 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_SeqTable.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,665 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/JATS-XHTMLtablesetup1-3.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,666 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_TSeq.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,667 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/INSD_INSDSeq.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,668 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/nlmmedlinecitationset_130101.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,670 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/archivecustom-models.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,671 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/nlmserials_080101.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
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2025-10-23 12:09:13,674 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_GBSeq.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,675 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_BioSource.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,676 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/BITS-embedded-index2.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,677 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/isogrk3.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,678 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_PCAssay.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,679 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/JATS-archivearticle1-3-mathml3.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,681 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_SeqCode.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,682 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/isodia.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
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2025-10-23 12:09:13,684 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_Seqfeat.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
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2025-10-23 12:09:13,686 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/isomscr.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,687 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_BlastOutput.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
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2025-10-23 12:09:13,691 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/MMDB_Chemical_graph.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,692 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/JATS-articlemeta1-3.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,694 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/display.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,696 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_Variation.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,698 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_PubMed.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,699 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_Medline.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,700 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_Seqres.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,701 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/isoamsn.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,703 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/nlmserials_100101.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,704 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_Rsite.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
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2025-10-23 12:09:13,710 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_PCSubstance.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,711 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_Rsite.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
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2025-10-23 12:09:13,713 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_Blast4.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,714 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_Cn3d.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,715 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/PDB_General.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,716 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/JATS-funding1-3.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
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2025-10-23 12:09:13,719 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/JATS-xmlspecchars1-3.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,721 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/JATS-ali-namespace1-3.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,722 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/nlmmedlinecitationset_150101.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,723 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/default-classes.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,725 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_Mime.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,726 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/isolat1.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,727 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_ObjPrt.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,728 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_Cn3d.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,729 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/isoamso.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,730 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/JATS-modules1-3.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,731 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/JATS-nlmcitation1-3.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,733 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/isoamsb.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
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2025-10-23 12:09:13,744 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/HomoloGene.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
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2025-10-23 12:09:13,751 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/JATS-backmatter1-3.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
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2025-10-23 12:09:13,754 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/mathml2-qname-1.mod -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,755 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_PubMed.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
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2025-10-23 12:09:13,759 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/isogrk4.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
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2025-10-23 12:09:13,767 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_PCSubstance.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
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2025-10-23 12:09:13,773 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/JATS-section1-3.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
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2025-10-23 12:09:13,776 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/mathml3-qname1.mod -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,777 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/SP_General.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,779 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/pubmed_080101.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,780 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_ID2Access.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
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2025-10-23 12:09:13,784 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/JATS-display1-3.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,785 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_TSeq.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
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2025-10-23 12:09:13,792 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_Organism.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
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2025-10-23 12:09:13,795 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/JATS-mathml3-modules1-3.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,796 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_Mim.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,797 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_Pub.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,798 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_Entrezgene.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,799 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/mathml2.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,801 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_Medline.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,802 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/einfo.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,803 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/nlmcommon_090101.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,804 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/JATS-archivecustom-modules1-3.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,806 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/bookdoc_130101.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,807 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_Submit.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,808 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_Pub.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,809 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/notat.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,810 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/JATS-default-mixes1-3.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,811 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/pmc-1.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,813 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_ScoreMat.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,814 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/esummary-v1.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,815 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/pubmed_180601.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,816 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/Docsum_3_1.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,817 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/archivecustom-modules.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,819 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/JATS-para1-3.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,820 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/NCBI_Entrezgene.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,821 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/journalmeta.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,822 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/isogrk2.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,823 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/archivecustom-mixes.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,824 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/pubmed_190101.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,826 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Entrez/DTDs/isolat2.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2025-10-23 12:09:13,827 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/_utils.py -> build/bdist.linux-riscv64/wheel/./Bio
2025-10-23 12:09:13,829 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Pathway
2025-10-23 12:09:13,830 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Pathway/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/Pathway
2025-10-23 12:09:13,831 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Pathway/Rep
2025-10-23 12:09:13,832 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Pathway/Rep/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/Pathway/Rep
2025-10-23 12:09:13,833 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Pathway/Rep/Graph.py -> build/bdist.linux-riscv64/wheel/./Bio/Pathway/Rep
2025-10-23 12:09:13,835 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Pathway/Rep/MultiGraph.py -> build/bdist.linux-riscv64/wheel/./Bio/Pathway/Rep
2025-10-23 12:09:13,836 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Application
2025-10-23 12:09:13,837 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Application/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/Application
2025-10-23 12:09:13,839 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/cpairwise2.cpython-312-riscv64-linux-musl.so -> build/bdist.linux-riscv64/wheel/./Bio
2025-10-23 12:09:13,840 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/pairwise2.py -> build/bdist.linux-riscv64/wheel/./Bio
2025-10-23 12:09:13,842 root INFO creating build/bdist.linux-riscv64/wheel/Bio/PDB
2025-10-23 12:09:13,843 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/Structure.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-10-23 12:09:13,844 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/Model.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-10-23 12:09:13,845 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/Selection.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-10-23 12:09:13,846 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/FragmentMapper.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-10-23 12:09:13,847 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/kdtrees.c -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-10-23 12:09:13,849 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/PDBExceptions.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-10-23 12:09:13,850 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/StructureAlignment.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-10-23 12:09:13,851 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/DSSP.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-10-23 12:09:13,852 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/ccealign.cpython-312-riscv64-linux-musl.so -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-10-23 12:09:13,854 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/ic_rebuild.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-10-23 12:09:13,855 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-10-23 12:09:13,856 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/MMCIFParser.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-10-23 12:09:13,857 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/MMCIF2Dict.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-10-23 12:09:13,858 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/qcprot.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-10-23 12:09:13,859 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/PDBParser.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-10-23 12:09:13,861 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/Entity.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-10-23 12:09:13,862 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/ccealignmodule.c -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-10-23 12:09:13,863 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/Dice.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-10-23 12:09:13,864 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/Atom.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-10-23 12:09:13,865 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/mmcifio.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-10-23 12:09:13,866 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/vectors.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-10-23 12:09:13,868 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/PDBIO.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-10-23 12:09:13,869 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/PDBList.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-10-23 12:09:13,870 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/ResidueDepth.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-10-23 12:09:13,871 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/_bcif_helper.cpython-312-riscv64-linux-musl.so -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-10-23 12:09:13,873 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/binary_cif.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-10-23 12:09:13,874 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/SASA.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-10-23 12:09:13,875 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/HSExposure.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-10-23 12:09:13,876 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/Residue.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-10-23 12:09:13,878 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/PDBMLParser.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-10-23 12:09:13,879 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/Superimposer.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-10-23 12:09:13,880 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/NeighborSearch.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-10-23 12:09:13,881 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/cealign.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-10-23 12:09:13,882 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/kdtrees.cpython-312-riscv64-linux-musl.so -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-10-23 12:09:13,884 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/Polypeptide.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-10-23 12:09:13,885 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/ic_data.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-10-23 12:09:13,886 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/parse_pdb_header.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-10-23 12:09:13,888 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/bcifhelpermodule.c -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-10-23 12:09:13,889 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/SCADIO.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-10-23 12:09:13,890 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/StructureBuilder.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-10-23 12:09:13,892 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/AbstractPropertyMap.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-10-23 12:09:13,893 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/PSEA.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-10-23 12:09:13,894 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/internal_coords.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-10-23 12:09:13,896 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/PICIO.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-10-23 12:09:13,898 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/Chain.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-10-23 12:09:13,899 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/NACCESS.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-10-23 12:09:13,901 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/alphafold_db.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2025-10-23 12:09:13,902 root INFO creating build/bdist.linux-riscv64/wheel/Bio/PDB/mmtf
2025-10-23 12:09:13,903 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/mmtf/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB/mmtf
2025-10-23 12:09:13,904 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/mmtf/mmtfio.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB/mmtf
2025-10-23 12:09:13,906 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/PDB/mmtf/DefaultParser.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB/mmtf
2025-10-23 12:09:13,907 root INFO creating build/bdist.linux-riscv64/wheel/Bio/CAPS
2025-10-23 12:09:13,908 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/CAPS/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/CAPS
2025-10-23 12:09:13,910 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Emboss
2025-10-23 12:09:13,911 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Emboss/PrimerSearch.py -> build/bdist.linux-riscv64/wheel/./Bio/Emboss
2025-10-23 12:09:13,912 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Emboss/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/Emboss
2025-10-23 12:09:13,913 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Emboss/Primer3.py -> build/bdist.linux-riscv64/wheel/./Bio/Emboss
2025-10-23 12:09:13,914 root INFO copying build/lib.linux-riscv64-cpython-312/Bio/Emboss/Applications.py -> build/bdist.linux-riscv64/wheel/./Bio/Emboss
2025-10-23 12:09:13,916 root INFO running install_egg_info
2025-10-23 12:09:13,937 root INFO Copying biopython.egg-info to build/bdist.linux-riscv64/wheel/./biopython-1.85-py3.12.egg-info
2025-10-23 12:09:13,944 root INFO running install_scripts
2025-10-23 12:09:13,982 root INFO creating build/bdist.linux-riscv64/wheel/biopython-1.85.dist-info/WHEEL
2025-10-23 12:09:13,985 wheel INFO creating '/home/buildozer/aports/community/py3-biopython/src/biopython-1.85/.dist/.tmp-ccwxza97/biopython-1.85-cp312-cp312-linux_riscv64.whl' and adding 'build/bdist.linux-riscv64/wheel' to it
2025-10-23 12:09:13,989 wheel INFO adding 'Bio/File.py'
2025-10-23 12:09:13,991 wheel INFO adding 'Bio/LogisticRegression.py'
2025-10-23 12:09:13,993 wheel INFO adding 'Bio/MarkovModel.py'
2025-10-23 12:09:13,995 wheel INFO adding 'Bio/MaxEntropy.py'
2025-10-23 12:09:13,996 wheel INFO adding 'Bio/NaiveBayes.py'
2025-10-23 12:09:13,999 wheel INFO adding 'Bio/Seq.py'
2025-10-23 12:09:14,003 wheel INFO adding 'Bio/SeqFeature.py'
2025-10-23 12:09:14,006 wheel INFO adding 'Bio/SeqRecord.py'
2025-10-23 12:09:14,009 wheel INFO adding 'Bio/__init__.py'
2025-10-23 12:09:14,010 wheel INFO adding 'Bio/_utils.py'
2025-10-23 12:09:14,012 wheel INFO adding 'Bio/bgzf.py'
2025-10-23 12:09:14,014 wheel INFO adding 'Bio/cpairwise2.cpython-312-riscv64-linux-musl.so'
2025-10-23 12:09:14,016 wheel INFO adding 'Bio/cpairwise2module.c'
2025-10-23 12:09:14,017 wheel INFO adding 'Bio/kNN.py'
2025-10-23 12:09:14,019 wheel INFO adding 'Bio/pairwise2.py'
2025-10-23 12:09:14,021 wheel INFO adding 'Bio/py.typed'
2025-10-23 12:09:14,024 wheel INFO adding 'Bio/Affy/CelFile.py'
2025-10-23 12:09:14,026 wheel INFO adding 'Bio/Affy/__init__.py'
2025-10-23 12:09:14,028 wheel INFO adding 'Bio/Align/AlignInfo.py'
2025-10-23 12:09:14,031 wheel INFO adding 'Bio/Align/__init__.py'
2025-10-23 12:09:14,035 wheel INFO adding 'Bio/Align/_aligncore.c'
2025-10-23 12:09:14,037 wheel INFO adding 'Bio/Align/_aligncore.cpython-312-riscv64-linux-musl.so'
2025-10-23 12:09:14,039 wheel INFO adding 'Bio/Align/_codonaligner.c'
2025-10-23 12:09:14,041 wheel INFO adding 'Bio/Align/_codonaligner.cpython-312-riscv64-linux-musl.so'
2025-10-23 12:09:14,045 wheel INFO adding 'Bio/Align/_pairwisealigner.c'
2025-10-23 12:09:14,053 wheel INFO adding 'Bio/Align/_pairwisealigner.cpython-312-riscv64-linux-musl.so'
2025-10-23 12:09:14,057 wheel INFO adding 'Bio/Align/a2m.py'
2025-10-23 12:09:14,058 wheel INFO adding 'Bio/Align/analysis.py'
2025-10-23 12:09:14,061 wheel INFO adding 'Bio/Align/bed.py'
2025-10-23 12:09:14,063 wheel INFO adding 'Bio/Align/bigbed.py'
2025-10-23 12:09:14,066 wheel INFO adding 'Bio/Align/bigmaf.py'
2025-10-23 12:09:14,068 wheel INFO adding 'Bio/Align/bigpsl.py'
2025-10-23 12:09:14,069 wheel INFO adding 'Bio/Align/chain.py'
2025-10-23 12:09:14,071 wheel INFO adding 'Bio/Align/clustal.py'
2025-10-23 12:09:14,072 wheel INFO adding 'Bio/Align/emboss.py'
2025-10-23 12:09:14,074 wheel INFO adding 'Bio/Align/exonerate.py'
2025-10-23 12:09:14,076 wheel INFO adding 'Bio/Align/fasta.py'
2025-10-23 12:09:14,077 wheel INFO adding 'Bio/Align/hhr.py'
2025-10-23 12:09:14,078 wheel INFO adding 'Bio/Align/interfaces.py'
2025-10-23 12:09:14,080 wheel INFO adding 'Bio/Align/maf.py'
2025-10-23 12:09:14,081 wheel INFO adding 'Bio/Align/mauve.py'
2025-10-23 12:09:14,083 wheel INFO adding 'Bio/Align/msf.py'
2025-10-23 12:09:14,084 wheel INFO adding 'Bio/Align/nexus.py'
2025-10-23 12:09:14,086 wheel INFO adding 'Bio/Align/phylip.py'
2025-10-23 12:09:14,087 wheel INFO adding 'Bio/Align/psl.py'
2025-10-23 12:09:14,089 wheel INFO adding 'Bio/Align/sam.py'
2025-10-23 12:09:14,092 wheel INFO adding 'Bio/Align/stockholm.py'
2025-10-23 12:09:14,094 wheel INFO adding 'Bio/Align/tabular.py'
2025-10-23 12:09:14,096 wheel INFO adding 'Bio/Align/Applications/_ClustalOmega.py'
2025-10-23 12:09:14,097 wheel INFO adding 'Bio/Align/Applications/_Clustalw.py'
2025-10-23 12:09:14,099 wheel INFO adding 'Bio/Align/Applications/_Dialign.py'
2025-10-23 12:09:14,100 wheel INFO adding 'Bio/Align/Applications/_MSAProbs.py'
2025-10-23 12:09:14,102 wheel INFO adding 'Bio/Align/Applications/_Mafft.py'
2025-10-23 12:09:14,104 wheel INFO adding 'Bio/Align/Applications/_Muscle.py'
2025-10-23 12:09:14,106 wheel INFO adding 'Bio/Align/Applications/_Prank.py'
2025-10-23 12:09:14,107 wheel INFO adding 'Bio/Align/Applications/_Probcons.py'
2025-10-23 12:09:14,109 wheel INFO adding 'Bio/Align/Applications/_TCoffee.py'
2025-10-23 12:09:14,110 wheel INFO adding 'Bio/Align/Applications/__init__.py'
2025-10-23 12:09:14,111 wheel INFO adding 'Bio/Align/substitution_matrices/__init__.py'
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2025-10-23 12:09:14,912 wheel INFO adding 'Bio/Phylo/Applications/_Fasttree.py'
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2025-10-23 12:09:14,934 wheel INFO adding 'Bio/PopGen/__init__.py'
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2025-10-23 12:09:14,966 wheel INFO adding 'Bio/SCOP/Cla.py'
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2025-10-23 12:09:15,028 wheel INFO adding 'Bio/SeqIO/AbiIO.py'
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2025-10-23 12:09:15,065 wheel INFO adding 'Bio/SeqIO/XdnaIO.py'
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2025-10-23 12:09:15,075 wheel INFO adding 'Bio/SeqUtils/CheckSum.py'
2025-10-23 12:09:15,076 wheel INFO adding 'Bio/SeqUtils/IsoelectricPoint.py'
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2025-10-23 12:09:15,080 wheel INFO adding 'Bio/SeqUtils/ProtParam.py'
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2025-10-23 12:09:15,088 wheel INFO adding 'Bio/Sequencing/Ace.py'
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2025-10-23 12:09:15,098 wheel INFO adding 'Bio/Sequencing/Applications/_samtools.py'
2025-10-23 12:09:15,100 wheel INFO adding 'Bio/SwissProt/KeyWList.py'
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2025-10-23 12:09:15,111 wheel INFO adding 'Bio/codonalign/__init__.py'
2025-10-23 12:09:15,113 wheel INFO adding 'Bio/codonalign/codonalignment.py'
2025-10-23 12:09:15,115 wheel INFO adding 'Bio/codonalign/codonseq.py'
2025-10-23 12:09:15,118 wheel INFO adding 'Bio/motifs/__init__.py'
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2025-10-23 12:09:15,123 wheel INFO adding 'Bio/motifs/alignace.py'
2025-10-23 12:09:15,124 wheel INFO adding 'Bio/motifs/clusterbuster.py'
2025-10-23 12:09:15,126 wheel INFO adding 'Bio/motifs/mast.py'
2025-10-23 12:09:15,127 wheel INFO adding 'Bio/motifs/matrix.py'
2025-10-23 12:09:15,129 wheel INFO adding 'Bio/motifs/meme.py'
2025-10-23 12:09:15,130 wheel INFO adding 'Bio/motifs/minimal.py'
2025-10-23 12:09:15,132 wheel INFO adding 'Bio/motifs/pfm.py'
2025-10-23 12:09:15,133 wheel INFO adding 'Bio/motifs/thresholds.py'
2025-10-23 12:09:15,134 wheel INFO adding 'Bio/motifs/transfac.py'
2025-10-23 12:09:15,136 wheel INFO adding 'Bio/motifs/xms.py'
2025-10-23 12:09:15,137 wheel INFO adding 'Bio/motifs/applications/__init__.py'
2025-10-23 12:09:15,138 wheel INFO adding 'Bio/motifs/applications/_xxmotif.py'
2025-10-23 12:09:15,140 wheel INFO adding 'Bio/motifs/jaspar/__init__.py'
2025-10-23 12:09:15,142 wheel INFO adding 'Bio/motifs/jaspar/db.py'
2025-10-23 12:09:15,144 wheel INFO adding 'Bio/phenotype/__init__.py'
2025-10-23 12:09:15,146 wheel INFO adding 'Bio/phenotype/phen_micro.py'
2025-10-23 12:09:15,148 wheel INFO adding 'Bio/phenotype/pm_fitting.py'
2025-10-23 12:09:15,150 wheel INFO adding 'BioSQL/BioSeq.py'
2025-10-23 12:09:15,152 wheel INFO adding 'BioSQL/BioSeqDatabase.py'
2025-10-23 12:09:15,154 wheel INFO adding 'BioSQL/DBUtils.py'
2025-10-23 12:09:15,156 wheel INFO adding 'BioSQL/Loader.py'
2025-10-23 12:09:15,158 wheel INFO adding 'BioSQL/__init__.py'
2025-10-23 12:09:15,159 wheel INFO adding 'BioSQL/py.typed'
2025-10-23 12:09:15,161 wheel INFO adding 'biopython-1.85.dist-info/licenses/LICENSE'
2025-10-23 12:09:15,163 wheel INFO adding 'biopython-1.85.dist-info/licenses/LICENSE.rst'
2025-10-23 12:09:15,164 wheel INFO adding 'biopython-1.85.dist-info/METADATA'
2025-10-23 12:09:15,165 wheel INFO adding 'biopython-1.85.dist-info/WHEEL'
2025-10-23 12:09:15,166 wheel INFO adding 'biopython-1.85.dist-info/top_level.txt'
2025-10-23 12:09:15,177 wheel INFO adding 'biopython-1.85.dist-info/RECORD'
2025-10-23 12:09:15,191 root INFO removing build/bdist.linux-riscv64/wheel
2025-10-23 12:09:15,286 gpep517 INFO The backend produced .dist/biopython-1.85-cp312-cp312-linux_riscv64.whl
biopython-1.85-cp312-cp312-linux_riscv64.whl
>>> py3-biopython: Entering fakeroot...
>>> py3-biopython-pyc*: Running split function pyc...
'usr/lib/python3.12/site-packages/BioSQL/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/BioSQL/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Affy/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Affy/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Medline/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Medline/__pycache__'
'usr/lib/python3.12/site-packages/Bio/GenBank/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/GenBank/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Data/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Data/__pycache__'
'usr/lib/python3.12/site-packages/Bio/AlignIO/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/AlignIO/__pycache__'
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'usr/lib/python3.12/site-packages/Bio/Align/substitution_matrices/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Align/substitution_matrices/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Align/Applications/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Align/Applications/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Align/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Align/__pycache__'
'usr/lib/python3.12/site-packages/Bio/NMR/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/NMR/__pycache__'
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'usr/lib/python3.12/site-packages/Bio/SearchIO/HHsuiteIO/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/SearchIO/HHsuiteIO/__pycache__'
'usr/lib/python3.12/site-packages/Bio/SearchIO/HmmerIO/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/SearchIO/HmmerIO/__pycache__'
'usr/lib/python3.12/site-packages/Bio/SearchIO/BlastIO/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/SearchIO/BlastIO/__pycache__'
'usr/lib/python3.12/site-packages/Bio/SearchIO/InterproscanIO/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/SearchIO/InterproscanIO/__pycache__'
'usr/lib/python3.12/site-packages/Bio/SearchIO/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/SearchIO/__pycache__'
'usr/lib/python3.12/site-packages/Bio/SearchIO/_model/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/SearchIO/_model/__pycache__'
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'usr/lib/python3.12/site-packages/Bio/Blast/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Blast/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Geo/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Geo/__pycache__'
'usr/lib/python3.12/site-packages/Bio/UniProt/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/UniProt/__pycache__'
'usr/lib/python3.12/site-packages/Bio/SCOP/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/SCOP/__pycache__'
'usr/lib/python3.12/site-packages/Bio/UniGene/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/UniGene/__pycache__'
'usr/lib/python3.12/site-packages/Bio/motifs/jaspar/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/motifs/jaspar/__pycache__'
'usr/lib/python3.12/site-packages/Bio/motifs/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/motifs/__pycache__'
'usr/lib/python3.12/site-packages/Bio/motifs/applications/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/motifs/applications/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Sequencing/Applications/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Sequencing/Applications/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Sequencing/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Sequencing/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Restriction/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Restriction/__pycache__'
'usr/lib/python3.12/site-packages/Bio/KEGG/KGML/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/KEGG/KGML/__pycache__'
'usr/lib/python3.12/site-packages/Bio/KEGG/Enzyme/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/KEGG/Enzyme/__pycache__'
'usr/lib/python3.12/site-packages/Bio/KEGG/Gene/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/KEGG/Gene/__pycache__'
'usr/lib/python3.12/site-packages/Bio/KEGG/Map/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/KEGG/Map/__pycache__'
'usr/lib/python3.12/site-packages/Bio/KEGG/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/KEGG/__pycache__'
'usr/lib/python3.12/site-packages/Bio/KEGG/Compound/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/KEGG/Compound/__pycache__'
'usr/lib/python3.12/site-packages/Bio/phenotype/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/phenotype/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Phylo/PAML/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Phylo/PAML/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Phylo/Applications/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Phylo/Applications/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Phylo/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Phylo/__pycache__'
'usr/lib/python3.12/site-packages/Bio/codonalign/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/codonalign/__pycache__'
'usr/lib/python3.12/site-packages/Bio/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/__pycache__'
'usr/lib/python3.12/site-packages/Bio/HMM/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/HMM/__pycache__'
'usr/lib/python3.12/site-packages/Bio/TogoWS/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/TogoWS/__pycache__'
'usr/lib/python3.12/site-packages/Bio/SeqUtils/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/SeqUtils/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Cluster/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Cluster/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Alphabet/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Alphabet/__pycache__'
'usr/lib/python3.12/site-packages/Bio/SwissProt/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/SwissProt/__pycache__'
'usr/lib/python3.12/site-packages/Bio/ExPASy/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/ExPASy/__pycache__'
'usr/lib/python3.12/site-packages/Bio/SeqIO/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/SeqIO/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Compass/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Compass/__pycache__'
'usr/lib/python3.12/site-packages/Bio/PopGen/GenePop/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/PopGen/GenePop/__pycache__'
'usr/lib/python3.12/site-packages/Bio/PopGen/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/PopGen/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Entrez/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Entrez/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Pathway/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Pathway/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Pathway/Rep/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Pathway/Rep/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Application/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Application/__pycache__'
'usr/lib/python3.12/site-packages/Bio/PDB/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/PDB/__pycache__'
'usr/lib/python3.12/site-packages/Bio/PDB/mmtf/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/PDB/mmtf/__pycache__'
'usr/lib/python3.12/site-packages/Bio/CAPS/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/CAPS/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Emboss/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Emboss/__pycache__'
>>> py3-biopython-pyc*: Preparing subpackage py3-biopython-pyc...
>>> py3-biopython-pyc*: Running postcheck for py3-biopython-pyc
>>> py3-biopython*: Running postcheck for py3-biopython
>>> py3-biopython*: Preparing package py3-biopython...
>>> py3-biopython*: Stripping binaries
>>> py3-biopython*: Scanning shared objects
>>> py3-biopython-pyc*: Tracing dependencies...
	python3~3.12
>>> py3-biopython-pyc*: Package size: 6.4 MB
>>> py3-biopython-pyc*: Compressing data...
>>> py3-biopython-pyc*: Create checksum...
>>> py3-biopython-pyc*: Create py3-biopython-pyc-1.85-r0.apk
>>> py3-biopython*: Tracing dependencies...
	py3-numpy
	python3
	python3~3.12
	so:libc.musl-riscv64.so.1
>>> py3-biopython*: Package size: 11.1 MB
>>> py3-biopython*: Compressing data...
>>> py3-biopython*: Create checksum...
>>> py3-biopython*: Create py3-biopython-1.85-r0.apk
>>> py3-biopython: Build complete at Thu, 23 Oct 2025 12:09:31 +0000 elapsed time 0h 2m 38s
>>> py3-biopython: Cleaning up srcdir
>>> py3-biopython: Cleaning up pkgdir
>>> py3-biopython: Cleaning up tmpdir
>>> py3-biopython: Uninstalling dependencies...
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busybox-1.37.0-r24.trigger: Executing script...
OK: 666 MiB in 105 packages
>>> py3-biopython: Updating the community/riscv64 repository index...
>>> py3-biopython: Signing the index...