>>> py3-biopython: Building community/py3-biopython 1.85-r0 (using abuild 3.16.0_rc4-r0) started Thu, 06 Nov 2025 20:53:19 +0000
>>> py3-biopython: Validating /home/buildozer/aports/community/py3-biopython/APKBUILD...
>>> WARNING: py3-biopython: No maintainer
>>> py3-biopython: Analyzing dependencies...
>>> py3-biopython: Installing for build: build-base py3-numpy python3 py3-gpep517 py3-setuptools py3-wheel py3-numpy-dev python3-dev
( 1/32) Installing libbz2 (1.0.8-r6)
( 2/32) Installing libffi (3.5.2-r0)
( 3/32) Installing gdbm (1.26-r0)
( 4/32) Installing xz-libs (5.8.1-r0)
( 5/32) Installing mpdecimal (4.0.1-r0)
( 6/32) Installing libpanelw (6.5_p20251010-r0)
( 7/32) Installing sqlite-libs (3.51.0-r0)
( 8/32) Installing python3 (3.12.12-r0)
( 9/32) Installing python3-pycache-pyc0 (3.12.12-r0)
(10/32) Installing pyc (3.12.12-r0)
(11/32) Installing py3-numpy-pyc (2.3.4-r0)
(12/32) Installing python3-pyc (3.12.12-r0)
(13/32) Installing libquadmath (15.2.0-r2)
(14/32) Installing libgfortran (15.2.0-r2)
(15/32) Installing openblas (0.3.30-r0)
(16/32) Installing py3-numpy (2.3.4-r0)
(17/32) Installing py3-numpy-tests (2.3.4-r0)
(18/32) Installing py3-installer (0.7.0-r2)
(19/32) Installing py3-installer-pyc (0.7.0-r2)
(20/32) Installing py3-gpep517 (19-r1)
(21/32) Installing py3-gpep517-pyc (19-r1)
(22/32) Installing py3-parsing (3.2.3-r0)
(23/32) Installing py3-parsing-pyc (3.2.3-r0)
(24/32) Installing py3-packaging (25.0-r0)
(25/32) Installing py3-packaging-pyc (25.0-r0)
(26/32) Installing py3-setuptools (80.9.0-r2)
(27/32) Installing py3-setuptools-pyc (80.9.0-r2)
(28/32) Installing py3-wheel (0.46.1-r0)
(29/32) Installing py3-wheel-pyc (0.46.1-r0)
(30/32) Installing py3-numpy-dev (2.3.4-r0)
(31/32) Installing python3-dev (3.12.12-r0)
(32/32) Installing .makedepends-py3-biopython (20251106.205335)
busybox-1.37.0-r24.trigger: Executing script...
OK: 567 MiB in 137 packages
>>> py3-biopython: Cleaning up srcdir
>>> py3-biopython: Cleaning up pkgdir
>>> py3-biopython: Cleaning up tmpdir
>>> py3-biopython: Fetching https://distfiles.alpinelinux.org/distfiles/v3.23/biopython-1.85.tar.gz
Connecting to distfiles.alpinelinux.org (172.105.82.32:443)
saving to '/var/cache/distfiles/v3.23/biopython-1.85.tar.gz.part'
biopython-1.85.tar.g 100% |********************************| 18.9M  0:00:00 ETA
'/var/cache/distfiles/v3.23/biopython-1.85.tar.gz.part' saved
/var/cache/distfiles/v3.23/biopython-1.85.tar.gz: OK
>>> py3-biopython: Fetching https://distfiles.alpinelinux.org/distfiles/v3.23/biopython-1.85.tar.gz
/var/cache/distfiles/v3.23/biopython-1.85.tar.gz: OK
>>> py3-biopython: Unpacking /var/cache/distfiles/v3.23/biopython-1.85.tar.gz...
2025-11-06 20:53:37,880 gpep517 INFO Building wheel via backend setuptools.build_meta:__legacy__
/usr/lib/python3.12/site-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated.
!!

        ********************************************************************************
        Please consider removing the following classifiers in favor of a SPDX license expression:

        License :: Freely Distributable

        See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
        ********************************************************************************

!!
  self._finalize_license_expression()
2025-11-06 20:53:37,907 root INFO running bdist_wheel
2025-11-06 20:53:37,928 root INFO running build
2025-11-06 20:53:37,928 root INFO running build_py
2025-11-06 20:53:37,933 root INFO creating build/lib.linux-i686-cpython-312/Bio
2025-11-06 20:53:37,933 root INFO copying Bio/Seq.py -> build/lib.linux-i686-cpython-312/Bio
2025-11-06 20:53:37,934 root INFO copying Bio/SeqFeature.py -> build/lib.linux-i686-cpython-312/Bio
2025-11-06 20:53:37,935 root INFO copying Bio/_utils.py -> build/lib.linux-i686-cpython-312/Bio
2025-11-06 20:53:37,935 root INFO copying Bio/kNN.py -> build/lib.linux-i686-cpython-312/Bio
2025-11-06 20:53:37,935 root INFO copying Bio/LogisticRegression.py -> build/lib.linux-i686-cpython-312/Bio
2025-11-06 20:53:37,936 root INFO copying Bio/MaxEntropy.py -> build/lib.linux-i686-cpython-312/Bio
2025-11-06 20:53:37,936 root INFO copying Bio/__init__.py -> build/lib.linux-i686-cpython-312/Bio
2025-11-06 20:53:37,936 root INFO copying Bio/NaiveBayes.py -> build/lib.linux-i686-cpython-312/Bio
2025-11-06 20:53:37,937 root INFO copying Bio/MarkovModel.py -> build/lib.linux-i686-cpython-312/Bio
2025-11-06 20:53:37,937 root INFO copying Bio/File.py -> build/lib.linux-i686-cpython-312/Bio
2025-11-06 20:53:37,937 root INFO copying Bio/SeqRecord.py -> build/lib.linux-i686-cpython-312/Bio
2025-11-06 20:53:37,938 root INFO copying Bio/bgzf.py -> build/lib.linux-i686-cpython-312/Bio
2025-11-06 20:53:37,938 root INFO copying Bio/pairwise2.py -> build/lib.linux-i686-cpython-312/Bio
2025-11-06 20:53:37,939 root INFO creating build/lib.linux-i686-cpython-312/Bio/Affy
2025-11-06 20:53:37,939 root INFO copying Bio/Affy/CelFile.py -> build/lib.linux-i686-cpython-312/Bio/Affy
2025-11-06 20:53:37,939 root INFO copying Bio/Affy/__init__.py -> build/lib.linux-i686-cpython-312/Bio/Affy
2025-11-06 20:53:37,940 root INFO creating build/lib.linux-i686-cpython-312/Bio/Align
2025-11-06 20:53:37,940 root INFO copying Bio/Align/clustal.py -> build/lib.linux-i686-cpython-312/Bio/Align
2025-11-06 20:53:37,941 root INFO copying Bio/Align/analysis.py -> build/lib.linux-i686-cpython-312/Bio/Align
2025-11-06 20:53:37,941 root INFO copying Bio/Align/interfaces.py -> build/lib.linux-i686-cpython-312/Bio/Align
2025-11-06 20:53:37,941 root INFO copying Bio/Align/mauve.py -> build/lib.linux-i686-cpython-312/Bio/Align
2025-11-06 20:53:37,942 root INFO copying Bio/Align/AlignInfo.py -> build/lib.linux-i686-cpython-312/Bio/Align
2025-11-06 20:53:37,942 root INFO copying Bio/Align/sam.py -> build/lib.linux-i686-cpython-312/Bio/Align
2025-11-06 20:53:37,942 root INFO copying Bio/Align/stockholm.py -> build/lib.linux-i686-cpython-312/Bio/Align
2025-11-06 20:53:37,943 root INFO copying Bio/Align/chain.py -> build/lib.linux-i686-cpython-312/Bio/Align
2025-11-06 20:53:37,943 root INFO copying Bio/Align/__init__.py -> build/lib.linux-i686-cpython-312/Bio/Align
2025-11-06 20:53:37,944 root INFO copying Bio/Align/bigmaf.py -> build/lib.linux-i686-cpython-312/Bio/Align
2025-11-06 20:53:37,944 root INFO copying Bio/Align/phylip.py -> build/lib.linux-i686-cpython-312/Bio/Align
2025-11-06 20:53:37,944 root INFO copying Bio/Align/bigpsl.py -> build/lib.linux-i686-cpython-312/Bio/Align
2025-11-06 20:53:37,945 root INFO copying Bio/Align/psl.py -> build/lib.linux-i686-cpython-312/Bio/Align
2025-11-06 20:53:37,945 root INFO copying Bio/Align/msf.py -> build/lib.linux-i686-cpython-312/Bio/Align
2025-11-06 20:53:37,946 root INFO copying Bio/Align/exonerate.py -> build/lib.linux-i686-cpython-312/Bio/Align
2025-11-06 20:53:37,946 root INFO copying Bio/Align/tabular.py -> build/lib.linux-i686-cpython-312/Bio/Align
2025-11-06 20:53:37,946 root INFO copying Bio/Align/fasta.py -> build/lib.linux-i686-cpython-312/Bio/Align
2025-11-06 20:53:37,947 root INFO copying Bio/Align/maf.py -> build/lib.linux-i686-cpython-312/Bio/Align
2025-11-06 20:53:37,947 root INFO copying Bio/Align/bigbed.py -> build/lib.linux-i686-cpython-312/Bio/Align
2025-11-06 20:53:37,947 root INFO copying Bio/Align/a2m.py -> build/lib.linux-i686-cpython-312/Bio/Align
2025-11-06 20:53:37,948 root INFO copying Bio/Align/nexus.py -> build/lib.linux-i686-cpython-312/Bio/Align
2025-11-06 20:53:37,948 root INFO copying Bio/Align/hhr.py -> build/lib.linux-i686-cpython-312/Bio/Align
2025-11-06 20:53:37,948 root INFO copying Bio/Align/emboss.py -> build/lib.linux-i686-cpython-312/Bio/Align
2025-11-06 20:53:37,949 root INFO copying Bio/Align/bed.py -> build/lib.linux-i686-cpython-312/Bio/Align
2025-11-06 20:53:37,949 root INFO creating build/lib.linux-i686-cpython-312/Bio/Align/Applications
2025-11-06 20:53:37,949 root INFO copying Bio/Align/Applications/_Mafft.py -> build/lib.linux-i686-cpython-312/Bio/Align/Applications
2025-11-06 20:53:37,950 root INFO copying Bio/Align/Applications/_TCoffee.py -> build/lib.linux-i686-cpython-312/Bio/Align/Applications
2025-11-06 20:53:37,950 root INFO copying Bio/Align/Applications/_Prank.py -> build/lib.linux-i686-cpython-312/Bio/Align/Applications
2025-11-06 20:53:37,950 root INFO copying Bio/Align/Applications/_Dialign.py -> build/lib.linux-i686-cpython-312/Bio/Align/Applications
2025-11-06 20:53:37,950 root INFO copying Bio/Align/Applications/_Probcons.py -> build/lib.linux-i686-cpython-312/Bio/Align/Applications
2025-11-06 20:53:37,951 root INFO copying Bio/Align/Applications/__init__.py -> build/lib.linux-i686-cpython-312/Bio/Align/Applications
2025-11-06 20:53:37,951 root INFO copying Bio/Align/Applications/_Muscle.py -> build/lib.linux-i686-cpython-312/Bio/Align/Applications
2025-11-06 20:53:37,951 root INFO copying Bio/Align/Applications/_Clustalw.py -> build/lib.linux-i686-cpython-312/Bio/Align/Applications
2025-11-06 20:53:37,952 root INFO copying Bio/Align/Applications/_MSAProbs.py -> build/lib.linux-i686-cpython-312/Bio/Align/Applications
2025-11-06 20:53:37,952 root INFO copying Bio/Align/Applications/_ClustalOmega.py -> build/lib.linux-i686-cpython-312/Bio/Align/Applications
2025-11-06 20:53:37,952 root INFO creating build/lib.linux-i686-cpython-312/Bio/Align/substitution_matrices
2025-11-06 20:53:37,953 root INFO copying Bio/Align/substitution_matrices/__init__.py -> build/lib.linux-i686-cpython-312/Bio/Align/substitution_matrices
2025-11-06 20:53:37,953 root INFO creating build/lib.linux-i686-cpython-312/Bio/AlignIO
2025-11-06 20:53:37,953 root INFO copying Bio/AlignIO/StockholmIO.py -> build/lib.linux-i686-cpython-312/Bio/AlignIO
2025-11-06 20:53:37,954 root INFO copying Bio/AlignIO/PhylipIO.py -> build/lib.linux-i686-cpython-312/Bio/AlignIO
2025-11-06 20:53:37,954 root INFO copying Bio/AlignIO/Interfaces.py -> build/lib.linux-i686-cpython-312/Bio/AlignIO
2025-11-06 20:53:37,954 root INFO copying Bio/AlignIO/__init__.py -> build/lib.linux-i686-cpython-312/Bio/AlignIO
2025-11-06 20:53:37,955 root INFO copying Bio/AlignIO/NexusIO.py -> build/lib.linux-i686-cpython-312/Bio/AlignIO
2025-11-06 20:53:37,955 root INFO copying Bio/AlignIO/MauveIO.py -> build/lib.linux-i686-cpython-312/Bio/AlignIO
2025-11-06 20:53:37,955 root INFO copying Bio/AlignIO/MsfIO.py -> build/lib.linux-i686-cpython-312/Bio/AlignIO
2025-11-06 20:53:37,955 root INFO copying Bio/AlignIO/MafIO.py -> build/lib.linux-i686-cpython-312/Bio/AlignIO
2025-11-06 20:53:37,956 root INFO copying Bio/AlignIO/FastaIO.py -> build/lib.linux-i686-cpython-312/Bio/AlignIO
2025-11-06 20:53:37,956 root INFO copying Bio/AlignIO/ClustalIO.py -> build/lib.linux-i686-cpython-312/Bio/AlignIO
2025-11-06 20:53:37,956 root INFO copying Bio/AlignIO/EmbossIO.py -> build/lib.linux-i686-cpython-312/Bio/AlignIO
2025-11-06 20:53:37,957 root INFO creating build/lib.linux-i686-cpython-312/Bio/Alphabet
2025-11-06 20:53:37,957 root INFO copying Bio/Alphabet/__init__.py -> build/lib.linux-i686-cpython-312/Bio/Alphabet
2025-11-06 20:53:37,957 root INFO creating build/lib.linux-i686-cpython-312/Bio/Application
2025-11-06 20:53:37,957 root INFO copying Bio/Application/__init__.py -> build/lib.linux-i686-cpython-312/Bio/Application
2025-11-06 20:53:37,958 root INFO creating build/lib.linux-i686-cpython-312/Bio/Blast
2025-11-06 20:53:37,958 root INFO copying Bio/Blast/NCBIWWW.py -> build/lib.linux-i686-cpython-312/Bio/Blast
2025-11-06 20:53:37,958 root INFO copying Bio/Blast/NCBIXML.py -> build/lib.linux-i686-cpython-312/Bio/Blast
2025-11-06 20:53:37,959 root INFO copying Bio/Blast/__init__.py -> build/lib.linux-i686-cpython-312/Bio/Blast
2025-11-06 20:53:37,959 root INFO copying Bio/Blast/_writers.py -> build/lib.linux-i686-cpython-312/Bio/Blast
2025-11-06 20:53:37,959 root INFO copying Bio/Blast/_parser.py -> build/lib.linux-i686-cpython-312/Bio/Blast
2025-11-06 20:53:37,960 root INFO copying Bio/Blast/Applications.py -> build/lib.linux-i686-cpython-312/Bio/Blast
2025-11-06 20:53:37,960 root INFO creating build/lib.linux-i686-cpython-312/Bio/CAPS
2025-11-06 20:53:37,960 root INFO copying Bio/CAPS/__init__.py -> build/lib.linux-i686-cpython-312/Bio/CAPS
2025-11-06 20:53:37,961 root INFO creating build/lib.linux-i686-cpython-312/Bio/Cluster
2025-11-06 20:53:37,961 root INFO copying Bio/Cluster/__init__.py -> build/lib.linux-i686-cpython-312/Bio/Cluster
2025-11-06 20:53:37,961 root INFO creating build/lib.linux-i686-cpython-312/Bio/codonalign
2025-11-06 20:53:37,961 root INFO copying Bio/codonalign/__init__.py -> build/lib.linux-i686-cpython-312/Bio/codonalign
2025-11-06 20:53:37,962 root INFO copying Bio/codonalign/codonalignment.py -> build/lib.linux-i686-cpython-312/Bio/codonalign
2025-11-06 20:53:37,962 root INFO copying Bio/codonalign/codonseq.py -> build/lib.linux-i686-cpython-312/Bio/codonalign
2025-11-06 20:53:37,962 root INFO creating build/lib.linux-i686-cpython-312/Bio/Compass
2025-11-06 20:53:37,963 root INFO copying Bio/Compass/__init__.py -> build/lib.linux-i686-cpython-312/Bio/Compass
2025-11-06 20:53:37,963 root INFO creating build/lib.linux-i686-cpython-312/Bio/Data
2025-11-06 20:53:37,963 root INFO copying Bio/Data/PDBData.py -> build/lib.linux-i686-cpython-312/Bio/Data
2025-11-06 20:53:37,964 root INFO copying Bio/Data/IUPACData.py -> build/lib.linux-i686-cpython-312/Bio/Data
2025-11-06 20:53:37,964 root INFO copying Bio/Data/__init__.py -> build/lib.linux-i686-cpython-312/Bio/Data
2025-11-06 20:53:37,964 root INFO copying Bio/Data/CodonTable.py -> build/lib.linux-i686-cpython-312/Bio/Data
2025-11-06 20:53:37,965 root INFO creating build/lib.linux-i686-cpython-312/Bio/Emboss
2025-11-06 20:53:37,965 root INFO copying Bio/Emboss/PrimerSearch.py -> build/lib.linux-i686-cpython-312/Bio/Emboss
2025-11-06 20:53:37,965 root INFO copying Bio/Emboss/__init__.py -> build/lib.linux-i686-cpython-312/Bio/Emboss
2025-11-06 20:53:37,965 root INFO copying Bio/Emboss/Applications.py -> build/lib.linux-i686-cpython-312/Bio/Emboss
2025-11-06 20:53:37,966 root INFO copying Bio/Emboss/Primer3.py -> build/lib.linux-i686-cpython-312/Bio/Emboss
2025-11-06 20:53:37,966 root INFO creating build/lib.linux-i686-cpython-312/Bio/Entrez
2025-11-06 20:53:37,966 root INFO copying Bio/Entrez/Parser.py -> build/lib.linux-i686-cpython-312/Bio/Entrez
2025-11-06 20:53:37,967 root INFO copying Bio/Entrez/__init__.py -> build/lib.linux-i686-cpython-312/Bio/Entrez
2025-11-06 20:53:37,967 root INFO creating build/lib.linux-i686-cpython-312/Bio/ExPASy
2025-11-06 20:53:37,967 root INFO copying Bio/ExPASy/Prosite.py -> build/lib.linux-i686-cpython-312/Bio/ExPASy
2025-11-06 20:53:37,967 root INFO copying Bio/ExPASy/__init__.py -> build/lib.linux-i686-cpython-312/Bio/ExPASy
2025-11-06 20:53:37,968 root INFO copying Bio/ExPASy/cellosaurus.py -> build/lib.linux-i686-cpython-312/Bio/ExPASy
2025-11-06 20:53:37,968 root INFO copying Bio/ExPASy/Prodoc.py -> build/lib.linux-i686-cpython-312/Bio/ExPASy
2025-11-06 20:53:37,968 root INFO copying Bio/ExPASy/Enzyme.py -> build/lib.linux-i686-cpython-312/Bio/ExPASy
2025-11-06 20:53:37,969 root INFO copying Bio/ExPASy/ScanProsite.py -> build/lib.linux-i686-cpython-312/Bio/ExPASy
2025-11-06 20:53:37,969 root INFO creating build/lib.linux-i686-cpython-312/Bio/GenBank
2025-11-06 20:53:37,969 root INFO copying Bio/GenBank/Scanner.py -> build/lib.linux-i686-cpython-312/Bio/GenBank
2025-11-06 20:53:37,970 root INFO copying Bio/GenBank/utils.py -> build/lib.linux-i686-cpython-312/Bio/GenBank
2025-11-06 20:53:37,970 root INFO copying Bio/GenBank/Record.py -> build/lib.linux-i686-cpython-312/Bio/GenBank
2025-11-06 20:53:37,970 root INFO copying Bio/GenBank/__init__.py -> build/lib.linux-i686-cpython-312/Bio/GenBank
2025-11-06 20:53:37,971 root INFO creating build/lib.linux-i686-cpython-312/Bio/Geo
2025-11-06 20:53:37,971 root INFO copying Bio/Geo/Record.py -> build/lib.linux-i686-cpython-312/Bio/Geo
2025-11-06 20:53:37,971 root INFO copying Bio/Geo/__init__.py -> build/lib.linux-i686-cpython-312/Bio/Geo
2025-11-06 20:53:37,972 root INFO creating build/lib.linux-i686-cpython-312/Bio/Graphics
2025-11-06 20:53:37,972 root INFO copying Bio/Graphics/DisplayRepresentation.py -> build/lib.linux-i686-cpython-312/Bio/Graphics
2025-11-06 20:53:37,972 root INFO copying Bio/Graphics/BasicChromosome.py -> build/lib.linux-i686-cpython-312/Bio/Graphics
2025-11-06 20:53:37,972 root INFO copying Bio/Graphics/ColorSpiral.py -> build/lib.linux-i686-cpython-312/Bio/Graphics
2025-11-06 20:53:37,973 root INFO copying Bio/Graphics/__init__.py -> build/lib.linux-i686-cpython-312/Bio/Graphics
2025-11-06 20:53:37,973 root INFO copying Bio/Graphics/KGML_vis.py -> build/lib.linux-i686-cpython-312/Bio/Graphics
2025-11-06 20:53:37,973 root INFO copying Bio/Graphics/Comparative.py -> build/lib.linux-i686-cpython-312/Bio/Graphics
2025-11-06 20:53:37,973 root INFO copying Bio/Graphics/Distribution.py -> build/lib.linux-i686-cpython-312/Bio/Graphics
2025-11-06 20:53:37,974 root INFO creating build/lib.linux-i686-cpython-312/Bio/Graphics/GenomeDiagram
2025-11-06 20:53:37,974 root INFO copying Bio/Graphics/GenomeDiagram/_AbstractDrawer.py -> build/lib.linux-i686-cpython-312/Bio/Graphics/GenomeDiagram
2025-11-06 20:53:37,974 root INFO copying Bio/Graphics/GenomeDiagram/_GraphSet.py -> build/lib.linux-i686-cpython-312/Bio/Graphics/GenomeDiagram
2025-11-06 20:53:37,975 root INFO copying Bio/Graphics/GenomeDiagram/_FeatureSet.py -> build/lib.linux-i686-cpython-312/Bio/Graphics/GenomeDiagram
2025-11-06 20:53:37,975 root INFO copying Bio/Graphics/GenomeDiagram/_CircularDrawer.py -> build/lib.linux-i686-cpython-312/Bio/Graphics/GenomeDiagram
2025-11-06 20:53:37,975 root INFO copying Bio/Graphics/GenomeDiagram/_Feature.py -> build/lib.linux-i686-cpython-312/Bio/Graphics/GenomeDiagram
2025-11-06 20:53:37,976 root INFO copying Bio/Graphics/GenomeDiagram/_LinearDrawer.py -> build/lib.linux-i686-cpython-312/Bio/Graphics/GenomeDiagram
2025-11-06 20:53:37,976 root INFO copying Bio/Graphics/GenomeDiagram/__init__.py -> build/lib.linux-i686-cpython-312/Bio/Graphics/GenomeDiagram
2025-11-06 20:53:37,976 root INFO copying Bio/Graphics/GenomeDiagram/_Colors.py -> build/lib.linux-i686-cpython-312/Bio/Graphics/GenomeDiagram
2025-11-06 20:53:37,976 root INFO copying Bio/Graphics/GenomeDiagram/_Graph.py -> build/lib.linux-i686-cpython-312/Bio/Graphics/GenomeDiagram
2025-11-06 20:53:37,977 root INFO copying Bio/Graphics/GenomeDiagram/_Diagram.py -> build/lib.linux-i686-cpython-312/Bio/Graphics/GenomeDiagram
2025-11-06 20:53:37,977 root INFO copying Bio/Graphics/GenomeDiagram/_Track.py -> build/lib.linux-i686-cpython-312/Bio/Graphics/GenomeDiagram
2025-11-06 20:53:37,977 root INFO copying Bio/Graphics/GenomeDiagram/_CrossLink.py -> build/lib.linux-i686-cpython-312/Bio/Graphics/GenomeDiagram
2025-11-06 20:53:37,978 root INFO creating build/lib.linux-i686-cpython-312/Bio/HMM
2025-11-06 20:53:37,978 root INFO copying Bio/HMM/__init__.py -> build/lib.linux-i686-cpython-312/Bio/HMM
2025-11-06 20:53:37,978 root INFO copying Bio/HMM/DynamicProgramming.py -> build/lib.linux-i686-cpython-312/Bio/HMM
2025-11-06 20:53:37,978 root INFO copying Bio/HMM/Trainer.py -> build/lib.linux-i686-cpython-312/Bio/HMM
2025-11-06 20:53:37,979 root INFO copying Bio/HMM/MarkovModel.py -> build/lib.linux-i686-cpython-312/Bio/HMM
2025-11-06 20:53:37,979 root INFO copying Bio/HMM/Utilities.py -> build/lib.linux-i686-cpython-312/Bio/HMM
2025-11-06 20:53:37,979 root INFO creating build/lib.linux-i686-cpython-312/Bio/KEGG
2025-11-06 20:53:37,980 root INFO copying Bio/KEGG/__init__.py -> build/lib.linux-i686-cpython-312/Bio/KEGG
2025-11-06 20:53:37,980 root INFO copying Bio/KEGG/REST.py -> build/lib.linux-i686-cpython-312/Bio/KEGG
2025-11-06 20:53:37,980 root INFO creating build/lib.linux-i686-cpython-312/Bio/KEGG/Compound
2025-11-06 20:53:37,980 root INFO copying Bio/KEGG/Compound/__init__.py -> build/lib.linux-i686-cpython-312/Bio/KEGG/Compound
2025-11-06 20:53:37,981 root INFO creating build/lib.linux-i686-cpython-312/Bio/KEGG/Enzyme
2025-11-06 20:53:37,981 root INFO copying Bio/KEGG/Enzyme/__init__.py -> build/lib.linux-i686-cpython-312/Bio/KEGG/Enzyme
2025-11-06 20:53:37,981 root INFO creating build/lib.linux-i686-cpython-312/Bio/KEGG/Gene
2025-11-06 20:53:37,981 root INFO copying Bio/KEGG/Gene/__init__.py -> build/lib.linux-i686-cpython-312/Bio/KEGG/Gene
2025-11-06 20:53:37,982 root INFO creating build/lib.linux-i686-cpython-312/Bio/KEGG/Map
2025-11-06 20:53:37,982 root INFO copying Bio/KEGG/Map/__init__.py -> build/lib.linux-i686-cpython-312/Bio/KEGG/Map
2025-11-06 20:53:37,982 root INFO creating build/lib.linux-i686-cpython-312/Bio/PDB/mmtf
2025-11-06 20:53:37,983 root INFO copying Bio/PDB/mmtf/DefaultParser.py -> build/lib.linux-i686-cpython-312/Bio/PDB/mmtf
2025-11-06 20:53:37,983 root INFO copying Bio/PDB/mmtf/__init__.py -> build/lib.linux-i686-cpython-312/Bio/PDB/mmtf
2025-11-06 20:53:37,983 root INFO copying Bio/PDB/mmtf/mmtfio.py -> build/lib.linux-i686-cpython-312/Bio/PDB/mmtf
2025-11-06 20:53:37,984 root INFO creating build/lib.linux-i686-cpython-312/Bio/KEGG/KGML
2025-11-06 20:53:37,984 root INFO copying Bio/KEGG/KGML/KGML_pathway.py -> build/lib.linux-i686-cpython-312/Bio/KEGG/KGML
2025-11-06 20:53:37,984 root INFO copying Bio/KEGG/KGML/KGML_parser.py -> build/lib.linux-i686-cpython-312/Bio/KEGG/KGML
2025-11-06 20:53:37,984 root INFO copying Bio/KEGG/KGML/__init__.py -> build/lib.linux-i686-cpython-312/Bio/KEGG/KGML
2025-11-06 20:53:37,985 root INFO creating build/lib.linux-i686-cpython-312/Bio/Medline
2025-11-06 20:53:37,985 root INFO copying Bio/Medline/__init__.py -> build/lib.linux-i686-cpython-312/Bio/Medline
2025-11-06 20:53:37,985 root INFO creating build/lib.linux-i686-cpython-312/Bio/motifs
2025-11-06 20:53:37,986 root INFO copying Bio/motifs/pfm.py -> build/lib.linux-i686-cpython-312/Bio/motifs
2025-11-06 20:53:37,994 root INFO copying Bio/motifs/thresholds.py -> build/lib.linux-i686-cpython-312/Bio/motifs
2025-11-06 20:53:37,994 root INFO copying Bio/motifs/matrix.py -> build/lib.linux-i686-cpython-312/Bio/motifs
2025-11-06 20:53:37,994 root INFO copying Bio/motifs/alignace.py -> build/lib.linux-i686-cpython-312/Bio/motifs
2025-11-06 20:53:37,995 root INFO copying Bio/motifs/minimal.py -> build/lib.linux-i686-cpython-312/Bio/motifs
2025-11-06 20:53:37,995 root INFO copying Bio/motifs/__init__.py -> build/lib.linux-i686-cpython-312/Bio/motifs
2025-11-06 20:53:37,995 root INFO copying Bio/motifs/clusterbuster.py -> build/lib.linux-i686-cpython-312/Bio/motifs
2025-11-06 20:53:37,996 root INFO copying Bio/motifs/transfac.py -> build/lib.linux-i686-cpython-312/Bio/motifs
2025-11-06 20:53:37,996 root INFO copying Bio/motifs/xms.py -> build/lib.linux-i686-cpython-312/Bio/motifs
2025-11-06 20:53:37,996 root INFO copying Bio/motifs/mast.py -> build/lib.linux-i686-cpython-312/Bio/motifs
2025-11-06 20:53:37,996 root INFO copying Bio/motifs/meme.py -> build/lib.linux-i686-cpython-312/Bio/motifs
2025-11-06 20:53:37,997 root INFO creating build/lib.linux-i686-cpython-312/Bio/motifs/applications
2025-11-06 20:53:37,997 root INFO copying Bio/motifs/applications/__init__.py -> build/lib.linux-i686-cpython-312/Bio/motifs/applications
2025-11-06 20:53:37,997 root INFO copying Bio/motifs/applications/_xxmotif.py -> build/lib.linux-i686-cpython-312/Bio/motifs/applications
2025-11-06 20:53:37,998 root INFO creating build/lib.linux-i686-cpython-312/Bio/motifs/jaspar
2025-11-06 20:53:37,998 root INFO copying Bio/motifs/jaspar/__init__.py -> build/lib.linux-i686-cpython-312/Bio/motifs/jaspar
2025-11-06 20:53:37,998 root INFO copying Bio/motifs/jaspar/db.py -> build/lib.linux-i686-cpython-312/Bio/motifs/jaspar
2025-11-06 20:53:37,999 root INFO creating build/lib.linux-i686-cpython-312/Bio/Nexus
2025-11-06 20:53:37,999 root INFO copying Bio/Nexus/Nexus.py -> build/lib.linux-i686-cpython-312/Bio/Nexus
2025-11-06 20:53:37,999 root INFO copying Bio/Nexus/__init__.py -> build/lib.linux-i686-cpython-312/Bio/Nexus
2025-11-06 20:53:38,000 root INFO copying Bio/Nexus/Nodes.py -> build/lib.linux-i686-cpython-312/Bio/Nexus
2025-11-06 20:53:38,000 root INFO copying Bio/Nexus/StandardData.py -> build/lib.linux-i686-cpython-312/Bio/Nexus
2025-11-06 20:53:38,000 root INFO copying Bio/Nexus/Trees.py -> build/lib.linux-i686-cpython-312/Bio/Nexus
2025-11-06 20:53:38,001 root INFO creating build/lib.linux-i686-cpython-312/Bio/NMR
2025-11-06 20:53:38,001 root INFO copying Bio/NMR/__init__.py -> build/lib.linux-i686-cpython-312/Bio/NMR
2025-11-06 20:53:38,001 root INFO copying Bio/NMR/xpktools.py -> build/lib.linux-i686-cpython-312/Bio/NMR
2025-11-06 20:53:38,002 root INFO copying Bio/NMR/NOEtools.py -> build/lib.linux-i686-cpython-312/Bio/NMR
2025-11-06 20:53:38,002 root INFO creating build/lib.linux-i686-cpython-312/Bio/Pathway
2025-11-06 20:53:38,002 root INFO copying Bio/Pathway/__init__.py -> build/lib.linux-i686-cpython-312/Bio/Pathway
2025-11-06 20:53:38,002 root INFO creating build/lib.linux-i686-cpython-312/Bio/Pathway/Rep
2025-11-06 20:53:38,003 root INFO copying Bio/Pathway/Rep/__init__.py -> build/lib.linux-i686-cpython-312/Bio/Pathway/Rep
2025-11-06 20:53:38,003 root INFO copying Bio/Pathway/Rep/MultiGraph.py -> build/lib.linux-i686-cpython-312/Bio/Pathway/Rep
2025-11-06 20:53:38,003 root INFO copying Bio/Pathway/Rep/Graph.py -> build/lib.linux-i686-cpython-312/Bio/Pathway/Rep
2025-11-06 20:53:38,005 root INFO copying Bio/PDB/Atom.py -> build/lib.linux-i686-cpython-312/Bio/PDB
2025-11-06 20:53:38,005 root INFO copying Bio/PDB/MMCIF2Dict.py -> build/lib.linux-i686-cpython-312/Bio/PDB
2025-11-06 20:53:38,005 root INFO copying Bio/PDB/parse_pdb_header.py -> build/lib.linux-i686-cpython-312/Bio/PDB
2025-11-06 20:53:38,005 root INFO copying Bio/PDB/DSSP.py -> build/lib.linux-i686-cpython-312/Bio/PDB
2025-11-06 20:53:38,006 root INFO copying Bio/PDB/PSEA.py -> build/lib.linux-i686-cpython-312/Bio/PDB
2025-11-06 20:53:38,006 root INFO copying Bio/PDB/mmcifio.py -> build/lib.linux-i686-cpython-312/Bio/PDB
2025-11-06 20:53:38,006 root INFO copying Bio/PDB/binary_cif.py -> build/lib.linux-i686-cpython-312/Bio/PDB
2025-11-06 20:53:38,007 root INFO copying Bio/PDB/ResidueDepth.py -> build/lib.linux-i686-cpython-312/Bio/PDB
2025-11-06 20:53:38,007 root INFO copying Bio/PDB/Selection.py -> build/lib.linux-i686-cpython-312/Bio/PDB
2025-11-06 20:53:38,007 root INFO copying Bio/PDB/PDBList.py -> build/lib.linux-i686-cpython-312/Bio/PDB
2025-11-06 20:53:38,008 root INFO copying Bio/PDB/PDBParser.py -> build/lib.linux-i686-cpython-312/Bio/PDB
2025-11-06 20:53:38,008 root INFO copying Bio/PDB/__init__.py -> build/lib.linux-i686-cpython-312/Bio/PDB
2025-11-06 20:53:38,008 root INFO copying Bio/PDB/Model.py -> build/lib.linux-i686-cpython-312/Bio/PDB
2025-11-06 20:53:38,008 root INFO copying Bio/PDB/FragmentMapper.py -> build/lib.linux-i686-cpython-312/Bio/PDB
2025-11-06 20:53:38,009 root INFO copying Bio/PDB/PDBExceptions.py -> build/lib.linux-i686-cpython-312/Bio/PDB
2025-11-06 20:53:38,009 root INFO copying Bio/PDB/PDBIO.py -> build/lib.linux-i686-cpython-312/Bio/PDB
2025-11-06 20:53:38,009 root INFO copying Bio/PDB/ic_rebuild.py -> build/lib.linux-i686-cpython-312/Bio/PDB
2025-11-06 20:53:38,009 root INFO copying Bio/PDB/StructureAlignment.py -> build/lib.linux-i686-cpython-312/Bio/PDB
2025-11-06 20:53:38,010 root INFO copying Bio/PDB/vectors.py -> build/lib.linux-i686-cpython-312/Bio/PDB
2025-11-06 20:53:38,010 root INFO copying Bio/PDB/Dice.py -> build/lib.linux-i686-cpython-312/Bio/PDB
2025-11-06 20:53:38,010 root INFO copying Bio/PDB/qcprot.py -> build/lib.linux-i686-cpython-312/Bio/PDB
2025-11-06 20:53:38,011 root INFO copying Bio/PDB/SCADIO.py -> build/lib.linux-i686-cpython-312/Bio/PDB
2025-11-06 20:53:38,011 root INFO copying Bio/PDB/Structure.py -> build/lib.linux-i686-cpython-312/Bio/PDB
2025-11-06 20:53:38,011 root INFO copying Bio/PDB/NeighborSearch.py -> build/lib.linux-i686-cpython-312/Bio/PDB
2025-11-06 20:53:38,011 root INFO copying Bio/PDB/alphafold_db.py -> build/lib.linux-i686-cpython-312/Bio/PDB
2025-11-06 20:53:38,012 root INFO copying Bio/PDB/StructureBuilder.py -> build/lib.linux-i686-cpython-312/Bio/PDB
2025-11-06 20:53:38,012 root INFO copying Bio/PDB/AbstractPropertyMap.py -> build/lib.linux-i686-cpython-312/Bio/PDB
2025-11-06 20:53:38,012 root INFO copying Bio/PDB/Chain.py -> build/lib.linux-i686-cpython-312/Bio/PDB
2025-11-06 20:53:38,013 root INFO copying Bio/PDB/Residue.py -> build/lib.linux-i686-cpython-312/Bio/PDB
2025-11-06 20:53:38,013 root INFO copying Bio/PDB/Polypeptide.py -> build/lib.linux-i686-cpython-312/Bio/PDB
2025-11-06 20:53:38,013 root INFO copying Bio/PDB/cealign.py -> build/lib.linux-i686-cpython-312/Bio/PDB
2025-11-06 20:53:38,013 root INFO copying Bio/PDB/Entity.py -> build/lib.linux-i686-cpython-312/Bio/PDB
2025-11-06 20:53:38,014 root INFO copying Bio/PDB/SASA.py -> build/lib.linux-i686-cpython-312/Bio/PDB
2025-11-06 20:53:38,014 root INFO copying Bio/PDB/NACCESS.py -> build/lib.linux-i686-cpython-312/Bio/PDB
2025-11-06 20:53:38,014 root INFO copying Bio/PDB/Superimposer.py -> build/lib.linux-i686-cpython-312/Bio/PDB
2025-11-06 20:53:38,015 root INFO copying Bio/PDB/PDBMLParser.py -> build/lib.linux-i686-cpython-312/Bio/PDB
2025-11-06 20:53:38,015 root INFO copying Bio/PDB/ic_data.py -> build/lib.linux-i686-cpython-312/Bio/PDB
2025-11-06 20:53:38,015 root INFO copying Bio/PDB/internal_coords.py -> build/lib.linux-i686-cpython-312/Bio/PDB
2025-11-06 20:53:38,016 root INFO copying Bio/PDB/MMCIFParser.py -> build/lib.linux-i686-cpython-312/Bio/PDB
2025-11-06 20:53:38,016 root INFO copying Bio/PDB/PICIO.py -> build/lib.linux-i686-cpython-312/Bio/PDB
2025-11-06 20:53:38,016 root INFO copying Bio/PDB/HSExposure.py -> build/lib.linux-i686-cpython-312/Bio/PDB
2025-11-06 20:53:38,017 root INFO creating build/lib.linux-i686-cpython-312/Bio/phenotype
2025-11-06 20:53:38,017 root INFO copying Bio/phenotype/pm_fitting.py -> build/lib.linux-i686-cpython-312/Bio/phenotype
2025-11-06 20:53:38,017 root INFO copying Bio/phenotype/__init__.py -> build/lib.linux-i686-cpython-312/Bio/phenotype
2025-11-06 20:53:38,018 root INFO copying Bio/phenotype/phen_micro.py -> build/lib.linux-i686-cpython-312/Bio/phenotype
2025-11-06 20:53:38,018 root INFO creating build/lib.linux-i686-cpython-312/Bio/PopGen
2025-11-06 20:53:38,018 root INFO copying Bio/PopGen/__init__.py -> build/lib.linux-i686-cpython-312/Bio/PopGen
2025-11-06 20:53:38,019 root INFO creating build/lib.linux-i686-cpython-312/Bio/PopGen/GenePop
2025-11-06 20:53:38,019 root INFO copying Bio/PopGen/GenePop/__init__.py -> build/lib.linux-i686-cpython-312/Bio/PopGen/GenePop
2025-11-06 20:53:38,019 root INFO copying Bio/PopGen/GenePop/Controller.py -> build/lib.linux-i686-cpython-312/Bio/PopGen/GenePop
2025-11-06 20:53:38,019 root INFO copying Bio/PopGen/GenePop/LargeFileParser.py -> build/lib.linux-i686-cpython-312/Bio/PopGen/GenePop
2025-11-06 20:53:38,020 root INFO copying Bio/PopGen/GenePop/EasyController.py -> build/lib.linux-i686-cpython-312/Bio/PopGen/GenePop
2025-11-06 20:53:38,020 root INFO copying Bio/PopGen/GenePop/FileParser.py -> build/lib.linux-i686-cpython-312/Bio/PopGen/GenePop
2025-11-06 20:53:38,020 root INFO creating build/lib.linux-i686-cpython-312/Bio/Restriction
2025-11-06 20:53:38,021 root INFO copying Bio/Restriction/__init__.py -> build/lib.linux-i686-cpython-312/Bio/Restriction
2025-11-06 20:53:38,021 root INFO copying Bio/Restriction/PrintFormat.py -> build/lib.linux-i686-cpython-312/Bio/Restriction
2025-11-06 20:53:38,021 root INFO copying Bio/Restriction/Restriction.py -> build/lib.linux-i686-cpython-312/Bio/Restriction
2025-11-06 20:53:38,021 root INFO copying Bio/Restriction/Restriction_Dictionary.py -> build/lib.linux-i686-cpython-312/Bio/Restriction
2025-11-06 20:53:38,022 root INFO creating build/lib.linux-i686-cpython-312/Bio/SCOP
2025-11-06 20:53:38,023 root INFO copying Bio/SCOP/Dom.py -> build/lib.linux-i686-cpython-312/Bio/SCOP
2025-11-06 20:53:38,023 root INFO copying Bio/SCOP/Raf.py -> build/lib.linux-i686-cpython-312/Bio/SCOP
2025-11-06 20:53:38,023 root INFO copying Bio/SCOP/Hie.py -> build/lib.linux-i686-cpython-312/Bio/SCOP
2025-11-06 20:53:38,023 root INFO copying Bio/SCOP/Residues.py -> build/lib.linux-i686-cpython-312/Bio/SCOP
2025-11-06 20:53:38,024 root INFO copying Bio/SCOP/__init__.py -> build/lib.linux-i686-cpython-312/Bio/SCOP
2025-11-06 20:53:38,024 root INFO copying Bio/SCOP/Des.py -> build/lib.linux-i686-cpython-312/Bio/SCOP
2025-11-06 20:53:38,024 root INFO copying Bio/SCOP/Cla.py -> build/lib.linux-i686-cpython-312/Bio/SCOP
2025-11-06 20:53:38,025 root INFO creating build/lib.linux-i686-cpython-312/Bio/SearchIO
2025-11-06 20:53:38,025 root INFO copying Bio/SearchIO/_index.py -> build/lib.linux-i686-cpython-312/Bio/SearchIO
2025-11-06 20:53:38,025 root INFO copying Bio/SearchIO/_utils.py -> build/lib.linux-i686-cpython-312/Bio/SearchIO
2025-11-06 20:53:38,026 root INFO copying Bio/SearchIO/BlatIO.py -> build/lib.linux-i686-cpython-312/Bio/SearchIO
2025-11-06 20:53:38,026 root INFO copying Bio/SearchIO/__init__.py -> build/lib.linux-i686-cpython-312/Bio/SearchIO
2025-11-06 20:53:38,026 root INFO copying Bio/SearchIO/FastaIO.py -> build/lib.linux-i686-cpython-312/Bio/SearchIO
2025-11-06 20:53:38,027 root INFO creating build/lib.linux-i686-cpython-312/Bio/SearchIO/_model
2025-11-06 20:53:38,027 root INFO copying Bio/SearchIO/_model/_base.py -> build/lib.linux-i686-cpython-312/Bio/SearchIO/_model
2025-11-06 20:53:38,027 root INFO copying Bio/SearchIO/_model/__init__.py -> build/lib.linux-i686-cpython-312/Bio/SearchIO/_model
2025-11-06 20:53:38,027 root INFO copying Bio/SearchIO/_model/hit.py -> build/lib.linux-i686-cpython-312/Bio/SearchIO/_model
2025-11-06 20:53:38,028 root INFO copying Bio/SearchIO/_model/query.py -> build/lib.linux-i686-cpython-312/Bio/SearchIO/_model
2025-11-06 20:53:38,028 root INFO copying Bio/SearchIO/_model/hsp.py -> build/lib.linux-i686-cpython-312/Bio/SearchIO/_model
2025-11-06 20:53:38,028 root INFO creating build/lib.linux-i686-cpython-312/Bio/SearchIO/BlastIO
2025-11-06 20:53:38,029 root INFO copying Bio/SearchIO/BlastIO/blast_tab.py -> build/lib.linux-i686-cpython-312/Bio/SearchIO/BlastIO
2025-11-06 20:53:38,029 root INFO copying Bio/SearchIO/BlastIO/__init__.py -> build/lib.linux-i686-cpython-312/Bio/SearchIO/BlastIO
2025-11-06 20:53:38,029 root INFO copying Bio/SearchIO/BlastIO/blast_xml.py -> build/lib.linux-i686-cpython-312/Bio/SearchIO/BlastIO
2025-11-06 20:53:38,030 root INFO creating build/lib.linux-i686-cpython-312/Bio/SearchIO/HHsuiteIO
2025-11-06 20:53:38,030 root INFO copying Bio/SearchIO/HHsuiteIO/__init__.py -> build/lib.linux-i686-cpython-312/Bio/SearchIO/HHsuiteIO
2025-11-06 20:53:38,030 root INFO copying Bio/SearchIO/HHsuiteIO/hhsuite2_text.py -> build/lib.linux-i686-cpython-312/Bio/SearchIO/HHsuiteIO
2025-11-06 20:53:38,031 root INFO creating build/lib.linux-i686-cpython-312/Bio/SearchIO/HmmerIO
2025-11-06 20:53:38,031 root INFO copying Bio/SearchIO/HmmerIO/hmmer3_text.py -> build/lib.linux-i686-cpython-312/Bio/SearchIO/HmmerIO
2025-11-06 20:53:38,031 root INFO copying Bio/SearchIO/HmmerIO/_base.py -> build/lib.linux-i686-cpython-312/Bio/SearchIO/HmmerIO
2025-11-06 20:53:38,031 root INFO copying Bio/SearchIO/HmmerIO/__init__.py -> build/lib.linux-i686-cpython-312/Bio/SearchIO/HmmerIO
2025-11-06 20:53:38,032 root INFO copying Bio/SearchIO/HmmerIO/hmmer2_text.py -> build/lib.linux-i686-cpython-312/Bio/SearchIO/HmmerIO
2025-11-06 20:53:38,032 root INFO copying Bio/SearchIO/HmmerIO/hmmer3_tab.py -> build/lib.linux-i686-cpython-312/Bio/SearchIO/HmmerIO
2025-11-06 20:53:38,032 root INFO copying Bio/SearchIO/HmmerIO/hmmer3_domtab.py -> build/lib.linux-i686-cpython-312/Bio/SearchIO/HmmerIO
2025-11-06 20:53:38,033 root INFO creating build/lib.linux-i686-cpython-312/Bio/SearchIO/ExonerateIO
2025-11-06 20:53:38,033 root INFO copying Bio/SearchIO/ExonerateIO/_base.py -> build/lib.linux-i686-cpython-312/Bio/SearchIO/ExonerateIO
2025-11-06 20:53:38,033 root INFO copying Bio/SearchIO/ExonerateIO/__init__.py -> build/lib.linux-i686-cpython-312/Bio/SearchIO/ExonerateIO
2025-11-06 20:53:38,033 root INFO copying Bio/SearchIO/ExonerateIO/exonerate_cigar.py -> build/lib.linux-i686-cpython-312/Bio/SearchIO/ExonerateIO
2025-11-06 20:53:38,034 root INFO copying Bio/SearchIO/ExonerateIO/exonerate_text.py -> build/lib.linux-i686-cpython-312/Bio/SearchIO/ExonerateIO
2025-11-06 20:53:38,034 root INFO copying Bio/SearchIO/ExonerateIO/exonerate_vulgar.py -> build/lib.linux-i686-cpython-312/Bio/SearchIO/ExonerateIO
2025-11-06 20:53:38,035 root INFO creating build/lib.linux-i686-cpython-312/Bio/SearchIO/InterproscanIO
2025-11-06 20:53:38,035 root INFO copying Bio/SearchIO/InterproscanIO/interproscan_xml.py -> build/lib.linux-i686-cpython-312/Bio/SearchIO/InterproscanIO
2025-11-06 20:53:38,035 root INFO copying Bio/SearchIO/InterproscanIO/__init__.py -> build/lib.linux-i686-cpython-312/Bio/SearchIO/InterproscanIO
2025-11-06 20:53:38,036 root INFO creating build/lib.linux-i686-cpython-312/Bio/SeqIO
2025-11-06 20:53:38,036 root INFO copying Bio/SeqIO/PhdIO.py -> build/lib.linux-i686-cpython-312/Bio/SeqIO
2025-11-06 20:53:38,036 root INFO copying Bio/SeqIO/_index.py -> build/lib.linux-i686-cpython-312/Bio/SeqIO
2025-11-06 20:53:38,036 root INFO copying Bio/SeqIO/SeqXmlIO.py -> build/lib.linux-i686-cpython-312/Bio/SeqIO
2025-11-06 20:53:38,037 root INFO copying Bio/SeqIO/GckIO.py -> build/lib.linux-i686-cpython-312/Bio/SeqIO
2025-11-06 20:53:38,037 root INFO copying Bio/SeqIO/PirIO.py -> build/lib.linux-i686-cpython-312/Bio/SeqIO
2025-11-06 20:53:38,037 root INFO copying Bio/SeqIO/QualityIO.py -> build/lib.linux-i686-cpython-312/Bio/SeqIO
2025-11-06 20:53:38,038 root INFO copying Bio/SeqIO/SwissIO.py -> build/lib.linux-i686-cpython-312/Bio/SeqIO
2025-11-06 20:53:38,038 root INFO copying Bio/SeqIO/Interfaces.py -> build/lib.linux-i686-cpython-312/Bio/SeqIO
2025-11-06 20:53:38,038 root INFO copying Bio/SeqIO/TwoBitIO.py -> build/lib.linux-i686-cpython-312/Bio/SeqIO
2025-11-06 20:53:38,039 root INFO copying Bio/SeqIO/IgIO.py -> build/lib.linux-i686-cpython-312/Bio/SeqIO
2025-11-06 20:53:38,039 root INFO copying Bio/SeqIO/TabIO.py -> build/lib.linux-i686-cpython-312/Bio/SeqIO
2025-11-06 20:53:38,039 root INFO copying Bio/SeqIO/XdnaIO.py -> build/lib.linux-i686-cpython-312/Bio/SeqIO
2025-11-06 20:53:38,040 root INFO copying Bio/SeqIO/AbiIO.py -> build/lib.linux-i686-cpython-312/Bio/SeqIO
2025-11-06 20:53:38,040 root INFO copying Bio/SeqIO/__init__.py -> build/lib.linux-i686-cpython-312/Bio/SeqIO
2025-11-06 20:53:38,040 root INFO copying Bio/SeqIO/InsdcIO.py -> build/lib.linux-i686-cpython-312/Bio/SeqIO
2025-11-06 20:53:38,041 root INFO copying Bio/SeqIO/GfaIO.py -> build/lib.linux-i686-cpython-312/Bio/SeqIO
2025-11-06 20:53:38,041 root INFO copying Bio/SeqIO/UniprotIO.py -> build/lib.linux-i686-cpython-312/Bio/SeqIO
2025-11-06 20:53:38,041 root INFO copying Bio/SeqIO/SnapGeneIO.py -> build/lib.linux-i686-cpython-312/Bio/SeqIO
2025-11-06 20:53:38,041 root INFO copying Bio/SeqIO/SffIO.py -> build/lib.linux-i686-cpython-312/Bio/SeqIO
2025-11-06 20:53:38,042 root INFO copying Bio/SeqIO/FastaIO.py -> build/lib.linux-i686-cpython-312/Bio/SeqIO
2025-11-06 20:53:38,042 root INFO copying Bio/SeqIO/NibIO.py -> build/lib.linux-i686-cpython-312/Bio/SeqIO
2025-11-06 20:53:38,042 root INFO copying Bio/SeqIO/AceIO.py -> build/lib.linux-i686-cpython-312/Bio/SeqIO
2025-11-06 20:53:38,043 root INFO copying Bio/SeqIO/PdbIO.py -> build/lib.linux-i686-cpython-312/Bio/SeqIO
2025-11-06 20:53:38,043 root INFO creating build/lib.linux-i686-cpython-312/Bio/SeqUtils
2025-11-06 20:53:38,043 root INFO copying Bio/SeqUtils/MeltingTemp.py -> build/lib.linux-i686-cpython-312/Bio/SeqUtils
2025-11-06 20:53:38,044 root INFO copying Bio/SeqUtils/CheckSum.py -> build/lib.linux-i686-cpython-312/Bio/SeqUtils
2025-11-06 20:53:38,044 root INFO copying Bio/SeqUtils/__init__.py -> build/lib.linux-i686-cpython-312/Bio/SeqUtils
2025-11-06 20:53:38,044 root INFO copying Bio/SeqUtils/ProtParam.py -> build/lib.linux-i686-cpython-312/Bio/SeqUtils
2025-11-06 20:53:38,045 root INFO copying Bio/SeqUtils/ProtParamData.py -> build/lib.linux-i686-cpython-312/Bio/SeqUtils
2025-11-06 20:53:38,045 root INFO copying Bio/SeqUtils/IsoelectricPoint.py -> build/lib.linux-i686-cpython-312/Bio/SeqUtils
2025-11-06 20:53:38,045 root INFO copying Bio/SeqUtils/lcc.py -> build/lib.linux-i686-cpython-312/Bio/SeqUtils
2025-11-06 20:53:38,045 root INFO creating build/lib.linux-i686-cpython-312/Bio/Sequencing
2025-11-06 20:53:38,046 root INFO copying Bio/Sequencing/Ace.py -> build/lib.linux-i686-cpython-312/Bio/Sequencing
2025-11-06 20:53:38,046 root INFO copying Bio/Sequencing/__init__.py -> build/lib.linux-i686-cpython-312/Bio/Sequencing
2025-11-06 20:53:38,046 root INFO copying Bio/Sequencing/Phd.py -> build/lib.linux-i686-cpython-312/Bio/Sequencing
2025-11-06 20:53:38,047 root INFO creating build/lib.linux-i686-cpython-312/Bio/Sequencing/Applications
2025-11-06 20:53:38,047 root INFO copying Bio/Sequencing/Applications/__init__.py -> build/lib.linux-i686-cpython-312/Bio/Sequencing/Applications
2025-11-06 20:53:38,047 root INFO copying Bio/Sequencing/Applications/_Novoalign.py -> build/lib.linux-i686-cpython-312/Bio/Sequencing/Applications
2025-11-06 20:53:38,047 root INFO copying Bio/Sequencing/Applications/_bwa.py -> build/lib.linux-i686-cpython-312/Bio/Sequencing/Applications
2025-11-06 20:53:38,048 root INFO copying Bio/Sequencing/Applications/_samtools.py -> build/lib.linux-i686-cpython-312/Bio/Sequencing/Applications
2025-11-06 20:53:38,048 root INFO creating build/lib.linux-i686-cpython-312/Bio/SVDSuperimposer
2025-11-06 20:53:38,048 root INFO copying Bio/SVDSuperimposer/__init__.py -> build/lib.linux-i686-cpython-312/Bio/SVDSuperimposer
2025-11-06 20:53:38,049 root INFO creating build/lib.linux-i686-cpython-312/Bio/SwissProt
2025-11-06 20:53:38,049 root INFO copying Bio/SwissProt/KeyWList.py -> build/lib.linux-i686-cpython-312/Bio/SwissProt
2025-11-06 20:53:38,049 root INFO copying Bio/SwissProt/__init__.py -> build/lib.linux-i686-cpython-312/Bio/SwissProt
2025-11-06 20:53:38,050 root INFO creating build/lib.linux-i686-cpython-312/Bio/TogoWS
2025-11-06 20:53:38,050 root INFO copying Bio/TogoWS/__init__.py -> build/lib.linux-i686-cpython-312/Bio/TogoWS
2025-11-06 20:53:38,050 root INFO creating build/lib.linux-i686-cpython-312/Bio/Phylo
2025-11-06 20:53:38,050 root INFO copying Bio/Phylo/PhyloXMLIO.py -> build/lib.linux-i686-cpython-312/Bio/Phylo
2025-11-06 20:53:38,051 root INFO copying Bio/Phylo/CDAOIO.py -> build/lib.linux-i686-cpython-312/Bio/Phylo
2025-11-06 20:53:38,051 root INFO copying Bio/Phylo/NeXMLIO.py -> build/lib.linux-i686-cpython-312/Bio/Phylo
2025-11-06 20:53:38,051 root INFO copying Bio/Phylo/Newick.py -> build/lib.linux-i686-cpython-312/Bio/Phylo
2025-11-06 20:53:38,052 root INFO copying Bio/Phylo/_cdao_owl.py -> build/lib.linux-i686-cpython-312/Bio/Phylo
2025-11-06 20:53:38,052 root INFO copying Bio/Phylo/_utils.py -> build/lib.linux-i686-cpython-312/Bio/Phylo
2025-11-06 20:53:38,052 root INFO copying Bio/Phylo/Consensus.py -> build/lib.linux-i686-cpython-312/Bio/Phylo
2025-11-06 20:53:38,053 root INFO copying Bio/Phylo/__init__.py -> build/lib.linux-i686-cpython-312/Bio/Phylo
2025-11-06 20:53:38,053 root INFO copying Bio/Phylo/NexusIO.py -> build/lib.linux-i686-cpython-312/Bio/Phylo
2025-11-06 20:53:38,053 root INFO copying Bio/Phylo/BaseTree.py -> build/lib.linux-i686-cpython-312/Bio/Phylo
2025-11-06 20:53:38,054 root INFO copying Bio/Phylo/TreeConstruction.py -> build/lib.linux-i686-cpython-312/Bio/Phylo
2025-11-06 20:53:38,054 root INFO copying Bio/Phylo/CDAO.py -> build/lib.linux-i686-cpython-312/Bio/Phylo
2025-11-06 20:53:38,054 root INFO copying Bio/Phylo/_io.py -> build/lib.linux-i686-cpython-312/Bio/Phylo
2025-11-06 20:53:38,054 root INFO copying Bio/Phylo/NewickIO.py -> build/lib.linux-i686-cpython-312/Bio/Phylo
2025-11-06 20:53:38,055 root INFO copying Bio/Phylo/NeXML.py -> build/lib.linux-i686-cpython-312/Bio/Phylo
2025-11-06 20:53:38,055 root INFO copying Bio/Phylo/PhyloXML.py -> build/lib.linux-i686-cpython-312/Bio/Phylo
2025-11-06 20:53:38,055 root INFO creating build/lib.linux-i686-cpython-312/Bio/Phylo/Applications
2025-11-06 20:53:38,056 root INFO copying Bio/Phylo/Applications/_Phyml.py -> build/lib.linux-i686-cpython-312/Bio/Phylo/Applications
2025-11-06 20:53:38,056 root INFO copying Bio/Phylo/Applications/__init__.py -> build/lib.linux-i686-cpython-312/Bio/Phylo/Applications
2025-11-06 20:53:38,056 root INFO copying Bio/Phylo/Applications/_Raxml.py -> build/lib.linux-i686-cpython-312/Bio/Phylo/Applications
2025-11-06 20:53:38,056 root INFO copying Bio/Phylo/Applications/_Fasttree.py -> build/lib.linux-i686-cpython-312/Bio/Phylo/Applications
2025-11-06 20:53:38,057 root INFO creating build/lib.linux-i686-cpython-312/Bio/Phylo/PAML
2025-11-06 20:53:38,057 root INFO copying Bio/Phylo/PAML/_parse_yn00.py -> build/lib.linux-i686-cpython-312/Bio/Phylo/PAML
2025-11-06 20:53:38,057 root INFO copying Bio/Phylo/PAML/__init__.py -> build/lib.linux-i686-cpython-312/Bio/Phylo/PAML
2025-11-06 20:53:38,058 root INFO copying Bio/Phylo/PAML/_paml.py -> build/lib.linux-i686-cpython-312/Bio/Phylo/PAML
2025-11-06 20:53:38,058 root INFO copying Bio/Phylo/PAML/_parse_codeml.py -> build/lib.linux-i686-cpython-312/Bio/Phylo/PAML
2025-11-06 20:53:38,058 root INFO copying Bio/Phylo/PAML/chi2.py -> build/lib.linux-i686-cpython-312/Bio/Phylo/PAML
2025-11-06 20:53:38,058 root INFO copying Bio/Phylo/PAML/yn00.py -> build/lib.linux-i686-cpython-312/Bio/Phylo/PAML
2025-11-06 20:53:38,059 root INFO copying Bio/Phylo/PAML/baseml.py -> build/lib.linux-i686-cpython-312/Bio/Phylo/PAML
2025-11-06 20:53:38,059 root INFO copying Bio/Phylo/PAML/codeml.py -> build/lib.linux-i686-cpython-312/Bio/Phylo/PAML
2025-11-06 20:53:38,059 root INFO copying Bio/Phylo/PAML/_parse_baseml.py -> build/lib.linux-i686-cpython-312/Bio/Phylo/PAML
2025-11-06 20:53:38,060 root INFO creating build/lib.linux-i686-cpython-312/Bio/UniGene
2025-11-06 20:53:38,060 root INFO copying Bio/UniGene/__init__.py -> build/lib.linux-i686-cpython-312/Bio/UniGene
2025-11-06 20:53:38,060 root INFO creating build/lib.linux-i686-cpython-312/Bio/UniProt
2025-11-06 20:53:38,060 root INFO copying Bio/UniProt/GOA.py -> build/lib.linux-i686-cpython-312/Bio/UniProt
2025-11-06 20:53:38,061 root INFO copying Bio/UniProt/__init__.py -> build/lib.linux-i686-cpython-312/Bio/UniProt
2025-11-06 20:53:38,061 root INFO creating build/lib.linux-i686-cpython-312/BioSQL
2025-11-06 20:53:38,061 root INFO copying BioSQL/DBUtils.py -> build/lib.linux-i686-cpython-312/BioSQL
2025-11-06 20:53:38,061 root INFO copying BioSQL/BioSeq.py -> build/lib.linux-i686-cpython-312/BioSQL
2025-11-06 20:53:38,062 root INFO copying BioSQL/__init__.py -> build/lib.linux-i686-cpython-312/BioSQL
2025-11-06 20:53:38,062 root INFO copying BioSQL/Loader.py -> build/lib.linux-i686-cpython-312/BioSQL
2025-11-06 20:53:38,062 root INFO copying BioSQL/BioSeqDatabase.py -> build/lib.linux-i686-cpython-312/BioSQL
2025-11-06 20:53:38,063 root INFO running egg_info
2025-11-06 20:53:38,066 root INFO writing biopython.egg-info/PKG-INFO
2025-11-06 20:53:38,067 root INFO writing dependency_links to biopython.egg-info/dependency_links.txt
2025-11-06 20:53:38,067 root INFO writing requirements to biopython.egg-info/requires.txt
2025-11-06 20:53:38,068 root INFO writing top-level names to biopython.egg-info/top_level.txt
2025-11-06 20:53:38,087 root INFO reading manifest file 'biopython.egg-info/SOURCES.txt'
2025-11-06 20:53:38,140 root INFO reading manifest template 'MANIFEST.in'
2025-11-06 20:53:38,224 root WARNING warning: no previously-included files found matching 'Doc/_build'
2025-11-06 20:53:38,230 root WARNING warning: no previously-included files found matching 'Tests/Gck/DGVC_GCK.zip'
2025-11-06 20:53:38,234 root WARNING warning: no previously-included files matching '*.pyc' found anywhere in distribution
2025-11-06 20:53:38,237 root WARNING warning: no previously-included files matching '*.pyo' found anywhere in distribution
2025-11-06 20:53:38,240 root WARNING warning: no previously-included files matching '*.py{}' found anywhere in distribution
2025-11-06 20:53:38,244 root WARNING warning: no previously-included files matching '*.py-e' found anywhere in distribution
2025-11-06 20:53:38,251 root WARNING warning: no previously-included files found matching 'Bio/Align/substitution_matrices/data/README.txt'
2025-11-06 20:53:38,251 root INFO adding license file 'LICENSE'
2025-11-06 20:53:38,251 root INFO adding license file 'LICENSE.rst'
2025-11-06 20:53:38,292 root INFO writing manifest file 'biopython.egg-info/SOURCES.txt'
/usr/lib/python3.12/site-packages/setuptools/command/build_py.py:212: _Warning: Package 'Bio.Align.substitution_matrices.data' is absent from the `packages` configuration.
!!

        ********************************************************************************
        ############################
        # Package would be ignored #
        ############################
        Python recognizes 'Bio.Align.substitution_matrices.data' as an importable package[^1],
        but it is absent from setuptools' `packages` configuration.

        This leads to an ambiguous overall configuration. If you want to distribute this
        package, please make sure that 'Bio.Align.substitution_matrices.data' is explicitly added
        to the `packages` configuration field.

        Alternatively, you can also rely on setuptools' discovery methods
        (for example by using `find_namespace_packages(...)`/`find_namespace:`
        instead of `find_packages(...)`/`find:`).

        You can read more about "package discovery" on setuptools documentation page:

        - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

        If you don't want 'Bio.Align.substitution_matrices.data' to be distributed and are
        already explicitly excluding 'Bio.Align.substitution_matrices.data' via
        `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
        you can try to use `exclude_package_data`, or `include-package-data=False` in
        combination with a more fine grained `package-data` configuration.

        You can read more about "package data files" on setuptools documentation page:

        - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


        [^1]: For Python, any directory (with suitable naming) can be imported,
              even if it does not contain any `.py` files.
              On the other hand, currently there is no concept of package data
              directory, all directories are treated like packages.
        ********************************************************************************

!!
  check.warn(importable)
/usr/lib/python3.12/site-packages/setuptools/command/build_py.py:212: _Warning: Package 'Bio.Entrez.DTDs' is absent from the `packages` configuration.
!!

        ********************************************************************************
        ############################
        # Package would be ignored #
        ############################
        Python recognizes 'Bio.Entrez.DTDs' as an importable package[^1],
        but it is absent from setuptools' `packages` configuration.

        This leads to an ambiguous overall configuration. If you want to distribute this
        package, please make sure that 'Bio.Entrez.DTDs' is explicitly added
        to the `packages` configuration field.

        Alternatively, you can also rely on setuptools' discovery methods
        (for example by using `find_namespace_packages(...)`/`find_namespace:`
        instead of `find_packages(...)`/`find:`).

        You can read more about "package discovery" on setuptools documentation page:

        - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

        If you don't want 'Bio.Entrez.DTDs' to be distributed and are
        already explicitly excluding 'Bio.Entrez.DTDs' via
        `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
        you can try to use `exclude_package_data`, or `include-package-data=False` in
        combination with a more fine grained `package-data` configuration.

        You can read more about "package data files" on setuptools documentation page:

        - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


        [^1]: For Python, any directory (with suitable naming) can be imported,
              even if it does not contain any `.py` files.
              On the other hand, currently there is no concept of package data
              directory, all directories are treated like packages.
        ********************************************************************************

!!
  check.warn(importable)
/usr/lib/python3.12/site-packages/setuptools/command/build_py.py:212: _Warning: Package 'Bio.Entrez.XSDs' is absent from the `packages` configuration.
!!

        ********************************************************************************
        ############################
        # Package would be ignored #
        ############################
        Python recognizes 'Bio.Entrez.XSDs' as an importable package[^1],
        but it is absent from setuptools' `packages` configuration.

        This leads to an ambiguous overall configuration. If you want to distribute this
        package, please make sure that 'Bio.Entrez.XSDs' is explicitly added
        to the `packages` configuration field.

        Alternatively, you can also rely on setuptools' discovery methods
        (for example by using `find_namespace_packages(...)`/`find_namespace:`
        instead of `find_packages(...)`/`find:`).

        You can read more about "package discovery" on setuptools documentation page:

        - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

        If you don't want 'Bio.Entrez.XSDs' to be distributed and are
        already explicitly excluding 'Bio.Entrez.XSDs' via
        `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
        you can try to use `exclude_package_data`, or `include-package-data=False` in
        combination with a more fine grained `package-data` configuration.

        You can read more about "package data files" on setuptools documentation page:

        - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


        [^1]: For Python, any directory (with suitable naming) can be imported,
              even if it does not contain any `.py` files.
              On the other hand, currently there is no concept of package data
              directory, all directories are treated like packages.
        ********************************************************************************

!!
  check.warn(importable)
2025-11-06 20:53:38,327 root INFO copying Bio/cpairwise2module.c -> build/lib.linux-i686-cpython-312/Bio
2025-11-06 20:53:38,327 root INFO copying Bio/py.typed -> build/lib.linux-i686-cpython-312/Bio
2025-11-06 20:53:38,327 root INFO copying Bio/Align/_aligncore.c -> build/lib.linux-i686-cpython-312/Bio/Align
2025-11-06 20:53:38,328 root INFO copying Bio/Align/_codonaligner.c -> build/lib.linux-i686-cpython-312/Bio/Align
2025-11-06 20:53:38,328 root INFO copying Bio/Align/_pairwisealigner.c -> build/lib.linux-i686-cpython-312/Bio/Align
2025-11-06 20:53:38,328 root INFO creating build/lib.linux-i686-cpython-312/Bio/Align/substitution_matrices/data
2025-11-06 20:53:38,329 root INFO copying Bio/Align/substitution_matrices/data/BENNER22 -> build/lib.linux-i686-cpython-312/Bio/Align/substitution_matrices/data
2025-11-06 20:53:38,329 root INFO copying Bio/Align/substitution_matrices/data/BENNER6 -> build/lib.linux-i686-cpython-312/Bio/Align/substitution_matrices/data
2025-11-06 20:53:38,329 root INFO copying Bio/Align/substitution_matrices/data/BENNER74 -> build/lib.linux-i686-cpython-312/Bio/Align/substitution_matrices/data
2025-11-06 20:53:38,329 root INFO copying Bio/Align/substitution_matrices/data/BLASTN -> build/lib.linux-i686-cpython-312/Bio/Align/substitution_matrices/data
2025-11-06 20:53:38,330 root INFO copying Bio/Align/substitution_matrices/data/BLASTP -> build/lib.linux-i686-cpython-312/Bio/Align/substitution_matrices/data
2025-11-06 20:53:38,330 root INFO copying Bio/Align/substitution_matrices/data/BLOSUM45 -> build/lib.linux-i686-cpython-312/Bio/Align/substitution_matrices/data
2025-11-06 20:53:38,330 root INFO copying Bio/Align/substitution_matrices/data/BLOSUM50 -> build/lib.linux-i686-cpython-312/Bio/Align/substitution_matrices/data
2025-11-06 20:53:38,331 root INFO copying Bio/Align/substitution_matrices/data/BLOSUM62 -> build/lib.linux-i686-cpython-312/Bio/Align/substitution_matrices/data
2025-11-06 20:53:38,331 root INFO copying Bio/Align/substitution_matrices/data/BLOSUM80 -> build/lib.linux-i686-cpython-312/Bio/Align/substitution_matrices/data
2025-11-06 20:53:38,331 root INFO copying Bio/Align/substitution_matrices/data/BLOSUM90 -> build/lib.linux-i686-cpython-312/Bio/Align/substitution_matrices/data
2025-11-06 20:53:38,331 root INFO copying Bio/Align/substitution_matrices/data/DAYHOFF -> build/lib.linux-i686-cpython-312/Bio/Align/substitution_matrices/data
2025-11-06 20:53:38,332 root INFO copying Bio/Align/substitution_matrices/data/FENG -> build/lib.linux-i686-cpython-312/Bio/Align/substitution_matrices/data
2025-11-06 20:53:38,332 root INFO copying Bio/Align/substitution_matrices/data/GENETIC -> build/lib.linux-i686-cpython-312/Bio/Align/substitution_matrices/data
2025-11-06 20:53:38,332 root INFO copying Bio/Align/substitution_matrices/data/GONNET1992 -> build/lib.linux-i686-cpython-312/Bio/Align/substitution_matrices/data
2025-11-06 20:53:38,333 root INFO copying Bio/Align/substitution_matrices/data/HOXD70 -> build/lib.linux-i686-cpython-312/Bio/Align/substitution_matrices/data
2025-11-06 20:53:38,333 root INFO copying Bio/Align/substitution_matrices/data/JOHNSON -> build/lib.linux-i686-cpython-312/Bio/Align/substitution_matrices/data
2025-11-06 20:53:38,333 root INFO copying Bio/Align/substitution_matrices/data/JONES -> build/lib.linux-i686-cpython-312/Bio/Align/substitution_matrices/data
2025-11-06 20:53:38,333 root INFO copying Bio/Align/substitution_matrices/data/LEVIN -> build/lib.linux-i686-cpython-312/Bio/Align/substitution_matrices/data
2025-11-06 20:53:38,334 root INFO copying Bio/Align/substitution_matrices/data/MCLACHLAN -> build/lib.linux-i686-cpython-312/Bio/Align/substitution_matrices/data
2025-11-06 20:53:38,334 root INFO copying Bio/Align/substitution_matrices/data/MDM78 -> build/lib.linux-i686-cpython-312/Bio/Align/substitution_matrices/data
2025-11-06 20:53:38,334 root INFO copying Bio/Align/substitution_matrices/data/MEGABLAST -> build/lib.linux-i686-cpython-312/Bio/Align/substitution_matrices/data
2025-11-06 20:53:38,335 root INFO copying Bio/Align/substitution_matrices/data/NUC.4.4 -> build/lib.linux-i686-cpython-312/Bio/Align/substitution_matrices/data
2025-11-06 20:53:38,335 root INFO copying Bio/Align/substitution_matrices/data/PAM250 -> build/lib.linux-i686-cpython-312/Bio/Align/substitution_matrices/data
2025-11-06 20:53:38,335 root INFO copying Bio/Align/substitution_matrices/data/PAM30 -> build/lib.linux-i686-cpython-312/Bio/Align/substitution_matrices/data
2025-11-06 20:53:38,336 root INFO copying Bio/Align/substitution_matrices/data/PAM70 -> build/lib.linux-i686-cpython-312/Bio/Align/substitution_matrices/data
2025-11-06 20:53:38,336 root INFO copying Bio/Align/substitution_matrices/data/RAO -> build/lib.linux-i686-cpython-312/Bio/Align/substitution_matrices/data
2025-11-06 20:53:38,336 root INFO copying Bio/Align/substitution_matrices/data/RISLER -> build/lib.linux-i686-cpython-312/Bio/Align/substitution_matrices/data
2025-11-06 20:53:38,336 root INFO copying Bio/Align/substitution_matrices/data/SCHNEIDER -> build/lib.linux-i686-cpython-312/Bio/Align/substitution_matrices/data
2025-11-06 20:53:38,337 root INFO copying Bio/Align/substitution_matrices/data/STR -> build/lib.linux-i686-cpython-312/Bio/Align/substitution_matrices/data
2025-11-06 20:53:38,337 root INFO copying Bio/Align/substitution_matrices/data/TRANS -> build/lib.linux-i686-cpython-312/Bio/Align/substitution_matrices/data
2025-11-06 20:53:38,337 root INFO copying Bio/Cluster/cluster.c -> build/lib.linux-i686-cpython-312/Bio/Cluster
2025-11-06 20:53:38,338 root INFO copying Bio/Cluster/cluster.h -> build/lib.linux-i686-cpython-312/Bio/Cluster
2025-11-06 20:53:38,338 root INFO copying Bio/Cluster/clustermodule.c -> build/lib.linux-i686-cpython-312/Bio/Cluster
2025-11-06 20:53:38,339 root INFO creating build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,339 root INFO copying Bio/Entrez/DTDs/BITS-embedded-index2.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,339 root INFO copying Bio/Entrez/DTDs/BITS-question-answer2.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,340 root INFO copying Bio/Entrez/DTDs/Docsum_3_0.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,340 root INFO copying Bio/Entrez/DTDs/Docsum_3_0.mod.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,340 root INFO copying Bio/Entrez/DTDs/Docsum_3_1.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,340 root INFO copying Bio/Entrez/DTDs/Docsum_3_1.mod.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,341 root INFO copying Bio/Entrez/DTDs/Docsum_3_2.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,341 root INFO copying Bio/Entrez/DTDs/Docsum_3_2.mod.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,341 root INFO copying Bio/Entrez/DTDs/Docsum_3_3.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,342 root INFO copying Bio/Entrez/DTDs/Docsum_3_3.mod.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,342 root INFO copying Bio/Entrez/DTDs/Docsum_3_4.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,342 root INFO copying Bio/Entrez/DTDs/Docsum_3_4.mod.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,343 root INFO copying Bio/Entrez/DTDs/EMBL_General.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,343 root INFO copying Bio/Entrez/DTDs/EMBL_General.mod.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,343 root INFO copying Bio/Entrez/DTDs/GenBank_General.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,343 root INFO copying Bio/Entrez/DTDs/GenBank_General.mod.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,344 root INFO copying Bio/Entrez/DTDs/HomoloGene.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,344 root INFO copying Bio/Entrez/DTDs/HomoloGene.mod.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,344 root INFO copying Bio/Entrez/DTDs/INSD_INSDSeq.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,345 root INFO copying Bio/Entrez/DTDs/INSD_INSDSeq.mod.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,345 root INFO copying Bio/Entrez/DTDs/JATS-XHTMLtablesetup1-3.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,345 root INFO copying Bio/Entrez/DTDs/JATS-ali-namespace1-3.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,346 root INFO copying Bio/Entrez/DTDs/JATS-archivearticle1-3-mathml3.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,346 root INFO copying Bio/Entrez/DTDs/JATS-archivecustom-classes1-3.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,346 root INFO copying Bio/Entrez/DTDs/JATS-archivecustom-mixes1-3.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,347 root INFO copying Bio/Entrez/DTDs/JATS-archivecustom-models1-3.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,347 root INFO copying Bio/Entrez/DTDs/JATS-archivecustom-modules1-3.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,347 root INFO copying Bio/Entrez/DTDs/JATS-articlemeta1-3.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,348 root INFO copying Bio/Entrez/DTDs/JATS-backmatter1-3.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,348 root INFO copying Bio/Entrez/DTDs/JATS-chars1-3.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,348 root INFO copying Bio/Entrez/DTDs/JATS-common-atts1-3.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,349 root INFO copying Bio/Entrez/DTDs/JATS-common1-3.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,349 root INFO copying Bio/Entrez/DTDs/JATS-default-classes1-3.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,350 root INFO copying Bio/Entrez/DTDs/JATS-default-mixes1-3.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,350 root INFO copying Bio/Entrez/DTDs/JATS-display1-3.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,350 root INFO copying Bio/Entrez/DTDs/JATS-format1-3.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,351 root INFO copying Bio/Entrez/DTDs/JATS-funding1-3.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,351 root INFO copying Bio/Entrez/DTDs/JATS-journalmeta1-3.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,352 root INFO copying Bio/Entrez/DTDs/JATS-link1-3.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,352 root INFO copying Bio/Entrez/DTDs/JATS-list1-3.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,352 root INFO copying Bio/Entrez/DTDs/JATS-math1-3.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,353 root INFO copying Bio/Entrez/DTDs/JATS-mathml3-mathmlsetup1-3.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,353 root INFO copying Bio/Entrez/DTDs/JATS-mathml3-modules1-3.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,353 root INFO copying Bio/Entrez/DTDs/JATS-modules1-3.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,354 root INFO copying Bio/Entrez/DTDs/JATS-nlmcitation1-3.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,354 root INFO copying Bio/Entrez/DTDs/JATS-notat1-3.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,354 root INFO copying Bio/Entrez/DTDs/JATS-para1-3.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,354 root INFO copying Bio/Entrez/DTDs/JATS-phrase1-3.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,355 root INFO copying Bio/Entrez/DTDs/JATS-references1-3.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,355 root INFO copying Bio/Entrez/DTDs/JATS-related-object1-3.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,356 root INFO copying Bio/Entrez/DTDs/JATS-section1-3.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,356 root INFO copying Bio/Entrez/DTDs/JATS-xmlspecchars1-3.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,356 root INFO copying Bio/Entrez/DTDs/MMDB.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,356 root INFO copying Bio/Entrez/DTDs/MMDB.mod.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,357 root INFO copying Bio/Entrez/DTDs/MMDB_Chemical_graph.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,357 root INFO copying Bio/Entrez/DTDs/MMDB_Chemical_graph.mod.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,357 root INFO copying Bio/Entrez/DTDs/MMDB_Features.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,358 root INFO copying Bio/Entrez/DTDs/MMDB_Features.mod.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,358 root INFO copying Bio/Entrez/DTDs/MMDB_Structural_model.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,358 root INFO copying Bio/Entrez/DTDs/MMDB_Structural_model.mod.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,359 root INFO copying Bio/Entrez/DTDs/NCBI_Access.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,359 root INFO copying Bio/Entrez/DTDs/NCBI_Access.mod.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,359 root INFO copying Bio/Entrez/DTDs/NCBI_Biblio.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,360 root INFO copying Bio/Entrez/DTDs/NCBI_Biblio.mod.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,360 root INFO copying Bio/Entrez/DTDs/NCBI_BioSource.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,360 root INFO copying Bio/Entrez/DTDs/NCBI_BioSource.mod.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,360 root INFO copying Bio/Entrez/DTDs/NCBI_BioTree.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,361 root INFO copying Bio/Entrez/DTDs/NCBI_BioTree.mod.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,361 root INFO copying Bio/Entrez/DTDs/NCBI_Blast4.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,361 root INFO copying Bio/Entrez/DTDs/NCBI_Blast4.mod.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,362 root INFO copying Bio/Entrez/DTDs/NCBI_BlastDL.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,362 root INFO copying Bio/Entrez/DTDs/NCBI_BlastDL.mod.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,362 root INFO copying Bio/Entrez/DTDs/NCBI_BlastOutput.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,363 root INFO copying Bio/Entrez/DTDs/NCBI_BlastOutput.mod.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,363 root INFO copying Bio/Entrez/DTDs/NCBI_Cdd.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,363 root INFO copying Bio/Entrez/DTDs/NCBI_Cdd.mod.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,363 root INFO copying Bio/Entrez/DTDs/NCBI_Cn3d.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,364 root INFO copying Bio/Entrez/DTDs/NCBI_Cn3d.mod.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,364 root INFO copying Bio/Entrez/DTDs/NCBI_Entity.mod.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,364 root INFO copying Bio/Entrez/DTDs/NCBI_Entrez2.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,365 root INFO copying Bio/Entrez/DTDs/NCBI_Entrez2.mod.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,365 root INFO copying Bio/Entrez/DTDs/NCBI_Entrezgene.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,365 root INFO copying Bio/Entrez/DTDs/NCBI_Entrezgene.mod.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,366 root INFO copying Bio/Entrez/DTDs/NCBI_FeatDef.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,366 root INFO copying Bio/Entrez/DTDs/NCBI_FeatDef.mod.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,366 root INFO copying Bio/Entrez/DTDs/NCBI_GBSeq.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,366 root INFO copying Bio/Entrez/DTDs/NCBI_GBSeq.mod.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,367 root INFO copying Bio/Entrez/DTDs/NCBI_Gene.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,367 root INFO copying Bio/Entrez/DTDs/NCBI_Gene.mod.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,367 root INFO copying Bio/Entrez/DTDs/NCBI_General.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,368 root INFO copying Bio/Entrez/DTDs/NCBI_General.mod.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,368 root INFO copying Bio/Entrez/DTDs/NCBI_ID1Access.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,368 root INFO copying Bio/Entrez/DTDs/NCBI_ID1Access.mod.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,369 root INFO copying Bio/Entrez/DTDs/NCBI_ID2Access.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,369 root INFO copying Bio/Entrez/DTDs/NCBI_ID2Access.mod.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,369 root INFO copying Bio/Entrez/DTDs/NCBI_MedArchive.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,369 root INFO copying Bio/Entrez/DTDs/NCBI_MedArchive.mod.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,370 root INFO copying Bio/Entrez/DTDs/NCBI_Medlars.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,370 root INFO copying Bio/Entrez/DTDs/NCBI_Medlars.mod.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,370 root INFO copying Bio/Entrez/DTDs/NCBI_Medline.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,371 root INFO copying Bio/Entrez/DTDs/NCBI_Medline.mod.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,371 root INFO copying Bio/Entrez/DTDs/NCBI_Mim.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,371 root INFO copying Bio/Entrez/DTDs/NCBI_Mim.mod.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,371 root INFO copying Bio/Entrez/DTDs/NCBI_Mime.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,372 root INFO copying Bio/Entrez/DTDs/NCBI_Mime.mod.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,372 root INFO copying Bio/Entrez/DTDs/NCBI_ObjPrt.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,372 root INFO copying Bio/Entrez/DTDs/NCBI_ObjPrt.mod.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,373 root INFO copying Bio/Entrez/DTDs/NCBI_Organism.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,373 root INFO copying Bio/Entrez/DTDs/NCBI_Organism.mod.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,373 root INFO copying Bio/Entrez/DTDs/NCBI_PCAssay.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,374 root INFO copying Bio/Entrez/DTDs/NCBI_PCAssay.mod.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,374 root INFO copying Bio/Entrez/DTDs/NCBI_PCSubstance.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,374 root INFO copying Bio/Entrez/DTDs/NCBI_PCSubstance.mod.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,375 root INFO copying Bio/Entrez/DTDs/NCBI_Project.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,375 root INFO copying Bio/Entrez/DTDs/NCBI_Project.mod.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,375 root INFO copying Bio/Entrez/DTDs/NCBI_Protein.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,375 root INFO copying Bio/Entrez/DTDs/NCBI_Protein.mod.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,376 root INFO copying Bio/Entrez/DTDs/NCBI_Pub.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,376 root INFO copying Bio/Entrez/DTDs/NCBI_Pub.mod.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,376 root INFO copying Bio/Entrez/DTDs/NCBI_PubMed.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,377 root INFO copying Bio/Entrez/DTDs/NCBI_PubMed.mod.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,377 root INFO copying Bio/Entrez/DTDs/NCBI_RNA.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,377 root INFO copying Bio/Entrez/DTDs/NCBI_RNA.mod.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,377 root INFO copying Bio/Entrez/DTDs/NCBI_Remap.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,378 root INFO copying Bio/Entrez/DTDs/NCBI_Remap.mod.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,378 root INFO copying Bio/Entrez/DTDs/NCBI_Rsite.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,378 root INFO copying Bio/Entrez/DTDs/NCBI_Rsite.mod.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,379 root INFO copying Bio/Entrez/DTDs/NCBI_ScoreMat.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,379 root INFO copying Bio/Entrez/DTDs/NCBI_ScoreMat.mod.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,380 root INFO copying Bio/Entrez/DTDs/NCBI_SeqCode.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,380 root INFO copying Bio/Entrez/DTDs/NCBI_SeqCode.mod.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,380 root INFO copying Bio/Entrez/DTDs/NCBI_SeqTable.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,381 root INFO copying Bio/Entrez/DTDs/NCBI_SeqTable.mod.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,381 root INFO copying Bio/Entrez/DTDs/NCBI_Seq_split.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,381 root INFO copying Bio/Entrez/DTDs/NCBI_Seq_split.mod.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,381 root INFO copying Bio/Entrez/DTDs/NCBI_Seqalign.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,382 root INFO copying Bio/Entrez/DTDs/NCBI_Seqalign.mod.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,382 root INFO copying Bio/Entrez/DTDs/NCBI_Seqfeat.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,382 root INFO copying Bio/Entrez/DTDs/NCBI_Seqfeat.mod.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,383 root INFO copying Bio/Entrez/DTDs/NCBI_Seqloc.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,383 root INFO copying Bio/Entrez/DTDs/NCBI_Seqloc.mod.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,383 root INFO copying Bio/Entrez/DTDs/NCBI_Seqres.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,384 root INFO copying Bio/Entrez/DTDs/NCBI_Seqres.mod.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,384 root INFO copying Bio/Entrez/DTDs/NCBI_Seqset.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,384 root INFO copying Bio/Entrez/DTDs/NCBI_Seqset.mod.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,385 root INFO copying Bio/Entrez/DTDs/NCBI_Sequence.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,385 root INFO copying Bio/Entrez/DTDs/NCBI_Sequence.mod.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,385 root INFO copying Bio/Entrez/DTDs/NCBI_Submit.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,385 root INFO copying Bio/Entrez/DTDs/NCBI_Submit.mod.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,386 root INFO copying Bio/Entrez/DTDs/NCBI_Systems.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,386 root INFO copying Bio/Entrez/DTDs/NCBI_TSeq.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,386 root INFO copying Bio/Entrez/DTDs/NCBI_TSeq.mod.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,387 root INFO copying Bio/Entrez/DTDs/NCBI_TxInit.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,387 root INFO copying Bio/Entrez/DTDs/NCBI_TxInit.mod.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,387 root INFO copying Bio/Entrez/DTDs/NCBI_Variation.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,388 root INFO copying Bio/Entrez/DTDs/NCBI_Variation.mod.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,388 root INFO copying Bio/Entrez/DTDs/NCBI_all.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,388 root INFO copying Bio/Entrez/DTDs/NSE.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,389 root INFO copying Bio/Entrez/DTDs/NSE.mod.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,389 root INFO copying Bio/Entrez/DTDs/OMSSA.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,389 root INFO copying Bio/Entrez/DTDs/OMSSA.mod.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,390 root INFO copying Bio/Entrez/DTDs/PDB_General.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,390 root INFO copying Bio/Entrez/DTDs/PDB_General.mod.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,390 root INFO copying Bio/Entrez/DTDs/PIR_General.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,391 root INFO copying Bio/Entrez/DTDs/PIR_General.mod.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,391 root INFO copying Bio/Entrez/DTDs/PRF_General.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,391 root INFO copying Bio/Entrez/DTDs/PRF_General.mod.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,391 root INFO copying Bio/Entrez/DTDs/SP_General.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,392 root INFO copying Bio/Entrez/DTDs/SP_General.mod.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,392 root INFO copying Bio/Entrez/DTDs/XHTMLtablesetup.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,392 root INFO copying Bio/Entrez/DTDs/archivearticle.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,393 root INFO copying Bio/Entrez/DTDs/archivecustom-classes.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,393 root INFO copying Bio/Entrez/DTDs/archivecustom-mixes.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,393 root INFO copying Bio/Entrez/DTDs/archivecustom-models.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,394 root INFO copying Bio/Entrez/DTDs/archivecustom-modules.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,394 root INFO copying Bio/Entrez/DTDs/articlemeta.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,394 root INFO copying Bio/Entrez/DTDs/backmatter.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,395 root INFO copying Bio/Entrez/DTDs/bookdoc_100301.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,395 root INFO copying Bio/Entrez/DTDs/bookdoc_110101.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,395 root INFO copying Bio/Entrez/DTDs/bookdoc_120101.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,396 root INFO copying Bio/Entrez/DTDs/bookdoc_130101.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,396 root INFO copying Bio/Entrez/DTDs/bookdoc_140101.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,396 root INFO copying Bio/Entrez/DTDs/bookdoc_150101.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,396 root INFO copying Bio/Entrez/DTDs/chars.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,397 root INFO copying Bio/Entrez/DTDs/common.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,397 root INFO copying Bio/Entrez/DTDs/default-classes.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,398 root INFO copying Bio/Entrez/DTDs/default-mixes.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,398 root INFO copying Bio/Entrez/DTDs/display.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,398 root INFO copying Bio/Entrez/DTDs/eInfo_020511.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,399 root INFO copying Bio/Entrez/DTDs/eLink_090910.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,399 root INFO copying Bio/Entrez/DTDs/eLink_101123.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,399 root INFO copying Bio/Entrez/DTDs/ePost_020511.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,399 root INFO copying Bio/Entrez/DTDs/eSearch_020511.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,400 root INFO copying Bio/Entrez/DTDs/eSpell.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,400 root INFO copying Bio/Entrez/DTDs/eSummary_041029.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,400 root INFO copying Bio/Entrez/DTDs/egquery.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,401 root INFO copying Bio/Entrez/DTDs/einfo.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,401 root INFO copying Bio/Entrez/DTDs/elink.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,401 root INFO copying Bio/Entrez/DTDs/elink_020122.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,401 root INFO copying Bio/Entrez/DTDs/epost.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,402 root INFO copying Bio/Entrez/DTDs/esearch.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,402 root INFO copying Bio/Entrez/DTDs/esummary-v1.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,402 root INFO copying Bio/Entrez/DTDs/esummary_clinvar.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,403 root INFO copying Bio/Entrez/DTDs/esummary_gene.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,403 root INFO copying Bio/Entrez/DTDs/format.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,403 root INFO copying Bio/Entrez/DTDs/htmltable.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,404 root INFO copying Bio/Entrez/DTDs/isoamsa.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,404 root INFO copying Bio/Entrez/DTDs/isoamsb.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,404 root INFO copying Bio/Entrez/DTDs/isoamsc.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,404 root INFO copying Bio/Entrez/DTDs/isoamsn.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,405 root INFO copying Bio/Entrez/DTDs/isoamso.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,405 root INFO copying Bio/Entrez/DTDs/isoamsr.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,405 root INFO copying Bio/Entrez/DTDs/isobox.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,406 root INFO copying Bio/Entrez/DTDs/isocyr1.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,406 root INFO copying Bio/Entrez/DTDs/isocyr2.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,406 root INFO copying Bio/Entrez/DTDs/isodia.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,407 root INFO copying Bio/Entrez/DTDs/isogrk1.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,407 root INFO copying Bio/Entrez/DTDs/isogrk2.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,407 root INFO copying Bio/Entrez/DTDs/isogrk3.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,407 root INFO copying Bio/Entrez/DTDs/isogrk4.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,408 root INFO copying Bio/Entrez/DTDs/isolat1.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,408 root INFO copying Bio/Entrez/DTDs/isolat2.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,408 root INFO copying Bio/Entrez/DTDs/isomfrk.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,409 root INFO copying Bio/Entrez/DTDs/isomopf.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,409 root INFO copying Bio/Entrez/DTDs/isomscr.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,409 root INFO copying Bio/Entrez/DTDs/isonum.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,410 root INFO copying Bio/Entrez/DTDs/isopub.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,410 root INFO copying Bio/Entrez/DTDs/isotech.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,410 root INFO copying Bio/Entrez/DTDs/journalmeta.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,411 root INFO copying Bio/Entrez/DTDs/link.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,411 root INFO copying Bio/Entrez/DTDs/list.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,411 root INFO copying Bio/Entrez/DTDs/math.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,412 root INFO copying Bio/Entrez/DTDs/mathml-in-pubmed.mod -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,412 root INFO copying Bio/Entrez/DTDs/mathml2-qname-1.mod -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,412 root INFO copying Bio/Entrez/DTDs/mathml2.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,412 root INFO copying Bio/Entrez/DTDs/mathml3-qname1.mod -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,413 root INFO copying Bio/Entrez/DTDs/mathml3.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,413 root INFO copying Bio/Entrez/DTDs/mathmlsetup.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,413 root INFO copying Bio/Entrez/DTDs/mmlalias.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,414 root INFO copying Bio/Entrez/DTDs/mmlextra.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,414 root INFO copying Bio/Entrez/DTDs/modules.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,414 root INFO copying Bio/Entrez/DTDs/nlm-articleset-2.0.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,415 root INFO copying Bio/Entrez/DTDs/nlmcatalogrecordset_170601.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,415 root INFO copying Bio/Entrez/DTDs/nlmcommon_011101.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,415 root INFO copying Bio/Entrez/DTDs/nlmcommon_080101.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,416 root INFO copying Bio/Entrez/DTDs/nlmcommon_090101.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,416 root INFO copying Bio/Entrez/DTDs/nlmmedline_011101.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,416 root INFO copying Bio/Entrez/DTDs/nlmmedline_080101.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,416 root INFO copying Bio/Entrez/DTDs/nlmmedline_090101.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,417 root INFO copying Bio/Entrez/DTDs/nlmmedlinecitation_011101.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,417 root INFO copying Bio/Entrez/DTDs/nlmmedlinecitation_080101.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,417 root INFO copying Bio/Entrez/DTDs/nlmmedlinecitation_090101.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,418 root INFO copying Bio/Entrez/DTDs/nlmmedlinecitationset_100101.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,418 root INFO copying Bio/Entrez/DTDs/nlmmedlinecitationset_100301.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,418 root INFO copying Bio/Entrez/DTDs/nlmmedlinecitationset_110101.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,419 root INFO copying Bio/Entrez/DTDs/nlmmedlinecitationset_120101.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,419 root INFO copying Bio/Entrez/DTDs/nlmmedlinecitationset_130101.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,419 root INFO copying Bio/Entrez/DTDs/nlmmedlinecitationset_130501.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,419 root INFO copying Bio/Entrez/DTDs/nlmmedlinecitationset_140101.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,420 root INFO copying Bio/Entrez/DTDs/nlmmedlinecitationset_150101.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,420 root INFO copying Bio/Entrez/DTDs/nlmserials_080101.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,420 root INFO copying Bio/Entrez/DTDs/nlmserials_100101.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,421 root INFO copying Bio/Entrez/DTDs/nlmsharedcatcit_080101.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,421 root INFO copying Bio/Entrez/DTDs/nlmsharedcatcit_090101.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,421 root INFO copying Bio/Entrez/DTDs/notat.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,422 root INFO copying Bio/Entrez/DTDs/para.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,422 root INFO copying Bio/Entrez/DTDs/phrase.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,422 root INFO copying Bio/Entrez/DTDs/pmc-1.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,423 root INFO copying Bio/Entrez/DTDs/pubmed_020114.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,423 root INFO copying Bio/Entrez/DTDs/pubmed_080101.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,423 root INFO copying Bio/Entrez/DTDs/pubmed_090101.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,423 root INFO copying Bio/Entrez/DTDs/pubmed_100101.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,424 root INFO copying Bio/Entrez/DTDs/pubmed_100301.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,424 root INFO copying Bio/Entrez/DTDs/pubmed_110101.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,424 root INFO copying Bio/Entrez/DTDs/pubmed_120101.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,425 root INFO copying Bio/Entrez/DTDs/pubmed_130101.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,425 root INFO copying Bio/Entrez/DTDs/pubmed_130501.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,425 root INFO copying Bio/Entrez/DTDs/pubmed_140101.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,425 root INFO copying Bio/Entrez/DTDs/pubmed_150101.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,426 root INFO copying Bio/Entrez/DTDs/pubmed_180101.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,426 root INFO copying Bio/Entrez/DTDs/pubmed_180601.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,426 root INFO copying Bio/Entrez/DTDs/pubmed_190101.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,427 root INFO copying Bio/Entrez/DTDs/references.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,427 root INFO copying Bio/Entrez/DTDs/section.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,427 root INFO copying Bio/Entrez/DTDs/taxon.dtd -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,427 root INFO copying Bio/Entrez/DTDs/xhtml-inlstyle-1.mod -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,428 root INFO copying Bio/Entrez/DTDs/xhtml-table-1.mod -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,428 root INFO copying Bio/Entrez/DTDs/xmlspecchars.ent -> build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs
2025-11-06 20:53:38,428 root INFO creating build/lib.linux-i686-cpython-312/Bio/Entrez/XSDs
2025-11-06 20:53:38,429 root INFO copying Bio/Entrez/XSDs/IPGReportSet.xsd -> build/lib.linux-i686-cpython-312/Bio/Entrez/XSDs
2025-11-06 20:53:38,429 root INFO copying Bio/Entrez/XSDs/NCBI_BlastOutput2.mod.xsd -> build/lib.linux-i686-cpython-312/Bio/Entrez/XSDs
2025-11-06 20:53:38,429 root INFO copying Bio/Entrez/XSDs/NCBI_BlastOutput2.xsd -> build/lib.linux-i686-cpython-312/Bio/Entrez/XSDs
2025-11-06 20:53:38,429 root INFO copying Bio/motifs/_pwm.c -> build/lib.linux-i686-cpython-312/Bio/motifs
2025-11-06 20:53:38,430 root INFO copying Bio/Nexus/cnexus.c -> build/lib.linux-i686-cpython-312/Bio/Nexus
2025-11-06 20:53:38,430 root INFO copying Bio/PDB/bcifhelpermodule.c -> build/lib.linux-i686-cpython-312/Bio/PDB
2025-11-06 20:53:38,430 root INFO copying Bio/PDB/ccealignmodule.c -> build/lib.linux-i686-cpython-312/Bio/PDB
2025-11-06 20:53:38,431 root INFO copying Bio/PDB/kdtrees.c -> build/lib.linux-i686-cpython-312/Bio/PDB
2025-11-06 20:53:38,431 root INFO copying Bio/SeqIO/_twoBitIO.c -> build/lib.linux-i686-cpython-312/Bio/SeqIO
2025-11-06 20:53:38,431 root INFO copying BioSQL/py.typed -> build/lib.linux-i686-cpython-312/BioSQL
2025-11-06 20:53:38,439 root INFO running build_ext
2025-11-06 20:53:38,441 root INFO building 'Bio.Align._codonaligner' extension
2025-11-06 20:53:38,442 root INFO creating build/temp.linux-i686-cpython-312/Bio/Align
2025-11-06 20:53:38,442 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.12 -c Bio/Align/_codonaligner.c -o build/temp.linux-i686-cpython-312/Bio/Align/_codonaligner.o
2025-11-06 20:53:39,039 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Wl,-z,pack-relative-relocs -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-i686-cpython-312/Bio/Align/_codonaligner.o -L/usr/lib -o build/lib.linux-i686-cpython-312/Bio/Align/_codonaligner.cpython-312-i386-linux-musl.so
2025-11-06 20:53:39,054 root INFO building 'Bio.Align._pairwisealigner' extension
2025-11-06 20:53:39,055 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.12 -c Bio/Align/_pairwisealigner.c -o build/temp.linux-i686-cpython-312/Bio/Align/_pairwisealigner.o
2025-11-06 20:53:46,638 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Wl,-z,pack-relative-relocs -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-i686-cpython-312/Bio/Align/_pairwisealigner.o -L/usr/lib -o build/lib.linux-i686-cpython-312/Bio/Align/_pairwisealigner.cpython-312-i386-linux-musl.so
2025-11-06 20:53:46,654 root INFO building 'Bio.Align._aligncore' extension
2025-11-06 20:53:46,654 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.12 -c Bio/Align/_aligncore.c -o build/temp.linux-i686-cpython-312/Bio/Align/_aligncore.o
2025-11-06 20:53:46,951 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Wl,-z,pack-relative-relocs -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-i686-cpython-312/Bio/Align/_aligncore.o -L/usr/lib -o build/lib.linux-i686-cpython-312/Bio/Align/_aligncore.cpython-312-i386-linux-musl.so
2025-11-06 20:53:46,970 root INFO building 'Bio.cpairwise2' extension
2025-11-06 20:53:46,971 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.12 -c Bio/cpairwise2module.c -o build/temp.linux-i686-cpython-312/Bio/cpairwise2module.o
2025-11-06 20:53:47,320 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Wl,-z,pack-relative-relocs -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-i686-cpython-312/Bio/cpairwise2module.o -L/usr/lib -o build/lib.linux-i686-cpython-312/Bio/cpairwise2.cpython-312-i386-linux-musl.so
2025-11-06 20:53:47,337 root INFO building 'Bio.Nexus.cnexus' extension
2025-11-06 20:53:47,338 root INFO creating build/temp.linux-i686-cpython-312/Bio/Nexus
2025-11-06 20:53:47,338 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.12 -c Bio/Nexus/cnexus.c -o build/temp.linux-i686-cpython-312/Bio/Nexus/cnexus.o
2025-11-06 20:53:47,518 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Wl,-z,pack-relative-relocs -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-i686-cpython-312/Bio/Nexus/cnexus.o -L/usr/lib -o build/lib.linux-i686-cpython-312/Bio/Nexus/cnexus.cpython-312-i386-linux-musl.so
2025-11-06 20:53:47,536 root INFO building 'Bio.motifs._pwm' extension
2025-11-06 20:53:47,536 root INFO creating build/temp.linux-i686-cpython-312/Bio/motifs
2025-11-06 20:53:47,537 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.12 -c Bio/motifs/_pwm.c -o build/temp.linux-i686-cpython-312/Bio/motifs/_pwm.o
2025-11-06 20:53:47,725 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Wl,-z,pack-relative-relocs -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-i686-cpython-312/Bio/motifs/_pwm.o -L/usr/lib -o build/lib.linux-i686-cpython-312/Bio/motifs/_pwm.cpython-312-i386-linux-musl.so
2025-11-06 20:53:47,743 root INFO building 'Bio.Cluster._cluster' extension
2025-11-06 20:53:47,744 root INFO creating build/temp.linux-i686-cpython-312/Bio/Cluster
2025-11-06 20:53:47,745 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.12 -c Bio/Cluster/cluster.c -o build/temp.linux-i686-cpython-312/Bio/Cluster/cluster.o -DCLUSTER_USE_PYTHON_MEMORY
2025-11-06 20:53:50,109 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.12 -c Bio/Cluster/clustermodule.c -o build/temp.linux-i686-cpython-312/Bio/Cluster/clustermodule.o -DCLUSTER_USE_PYTHON_MEMORY
2025-11-06 20:53:50,933 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Wl,-z,pack-relative-relocs -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-i686-cpython-312/Bio/Cluster/cluster.o build/temp.linux-i686-cpython-312/Bio/Cluster/clustermodule.o -L/usr/lib -o build/lib.linux-i686-cpython-312/Bio/Cluster/_cluster.cpython-312-i386-linux-musl.so
2025-11-06 20:53:50,952 root INFO building 'Bio.PDB.ccealign' extension
2025-11-06 20:53:50,953 root INFO creating build/temp.linux-i686-cpython-312/Bio/PDB
2025-11-06 20:53:50,953 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.12 -c Bio/PDB/ccealignmodule.c -o build/temp.linux-i686-cpython-312/Bio/PDB/ccealignmodule.o
2025-11-06 20:53:51,354 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Wl,-z,pack-relative-relocs -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-i686-cpython-312/Bio/PDB/ccealignmodule.o -L/usr/lib -o build/lib.linux-i686-cpython-312/Bio/PDB/ccealign.cpython-312-i386-linux-musl.so
2025-11-06 20:53:51,371 root INFO building 'Bio.PDB.kdtrees' extension
2025-11-06 20:53:51,372 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.12 -c Bio/PDB/kdtrees.c -o build/temp.linux-i686-cpython-312/Bio/PDB/kdtrees.o
2025-11-06 20:53:51,903 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Wl,-z,pack-relative-relocs -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-i686-cpython-312/Bio/PDB/kdtrees.o -L/usr/lib -o build/lib.linux-i686-cpython-312/Bio/PDB/kdtrees.cpython-312-i386-linux-musl.so
2025-11-06 20:53:51,920 root INFO building 'Bio.PDB._bcif_helper' extension
2025-11-06 20:53:51,920 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.12 -c Bio/PDB/bcifhelpermodule.c -o build/temp.linux-i686-cpython-312/Bio/PDB/bcifhelpermodule.o
2025-11-06 20:53:52,128 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Wl,-z,pack-relative-relocs -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-i686-cpython-312/Bio/PDB/bcifhelpermodule.o -L/usr/lib -o build/lib.linux-i686-cpython-312/Bio/PDB/_bcif_helper.cpython-312-i386-linux-musl.so
2025-11-06 20:53:52,146 root INFO building 'Bio.SeqIO._twoBitIO' extension
2025-11-06 20:53:52,147 root INFO creating build/temp.linux-i686-cpython-312/Bio/SeqIO
2025-11-06 20:53:52,147 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.12 -c Bio/SeqIO/_twoBitIO.c -o build/temp.linux-i686-cpython-312/Bio/SeqIO/_twoBitIO.o
2025-11-06 20:53:52,403 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Wl,-z,pack-relative-relocs -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-i686-cpython-312/Bio/SeqIO/_twoBitIO.o -L/usr/lib -o build/lib.linux-i686-cpython-312/Bio/SeqIO/_twoBitIO.cpython-312-i386-linux-musl.so
2025-11-06 20:53:52,432 root INFO installing to build/bdist.linux-i686/wheel
2025-11-06 20:53:52,432 root INFO running install
2025-11-06 20:53:52,449 root INFO running install_lib
2025-11-06 20:53:52,456 root INFO creating build/bdist.linux-i686/wheel
2025-11-06 20:53:52,456 root INFO creating build/bdist.linux-i686/wheel/Bio
2025-11-06 20:53:52,456 root INFO copying build/lib.linux-i686-cpython-312/Bio/cpairwise2module.c -> build/bdist.linux-i686/wheel/./Bio
2025-11-06 20:53:52,457 root INFO creating build/bdist.linux-i686/wheel/Bio/Geo
2025-11-06 20:53:52,457 root INFO copying build/lib.linux-i686-cpython-312/Bio/Geo/Record.py -> build/bdist.linux-i686/wheel/./Bio/Geo
2025-11-06 20:53:52,457 root INFO copying build/lib.linux-i686-cpython-312/Bio/Geo/__init__.py -> build/bdist.linux-i686/wheel/./Bio/Geo
2025-11-06 20:53:52,458 root INFO creating build/bdist.linux-i686/wheel/Bio/Align
2025-11-06 20:53:52,458 root INFO copying build/lib.linux-i686-cpython-312/Bio/Align/clustal.py -> build/bdist.linux-i686/wheel/./Bio/Align
2025-11-06 20:53:52,459 root INFO copying build/lib.linux-i686-cpython-312/Bio/Align/analysis.py -> build/bdist.linux-i686/wheel/./Bio/Align
2025-11-06 20:53:52,459 root INFO copying build/lib.linux-i686-cpython-312/Bio/Align/interfaces.py -> build/bdist.linux-i686/wheel/./Bio/Align
2025-11-06 20:53:52,459 root INFO copying build/lib.linux-i686-cpython-312/Bio/Align/mauve.py -> build/bdist.linux-i686/wheel/./Bio/Align
2025-11-06 20:53:52,460 root INFO copying build/lib.linux-i686-cpython-312/Bio/Align/AlignInfo.py -> build/bdist.linux-i686/wheel/./Bio/Align
2025-11-06 20:53:52,460 root INFO copying build/lib.linux-i686-cpython-312/Bio/Align/_codonaligner.c -> build/bdist.linux-i686/wheel/./Bio/Align
2025-11-06 20:53:52,460 root INFO copying build/lib.linux-i686-cpython-312/Bio/Align/sam.py -> build/bdist.linux-i686/wheel/./Bio/Align
2025-11-06 20:53:52,461 root INFO copying build/lib.linux-i686-cpython-312/Bio/Align/stockholm.py -> build/bdist.linux-i686/wheel/./Bio/Align
2025-11-06 20:53:52,461 root INFO copying build/lib.linux-i686-cpython-312/Bio/Align/chain.py -> build/bdist.linux-i686/wheel/./Bio/Align
2025-11-06 20:53:52,461 root INFO copying build/lib.linux-i686-cpython-312/Bio/Align/__init__.py -> build/bdist.linux-i686/wheel/./Bio/Align
2025-11-06 20:53:52,462 root INFO copying build/lib.linux-i686-cpython-312/Bio/Align/_codonaligner.cpython-312-i386-linux-musl.so -> build/bdist.linux-i686/wheel/./Bio/Align
2025-11-06 20:53:52,462 root INFO copying build/lib.linux-i686-cpython-312/Bio/Align/bigmaf.py -> build/bdist.linux-i686/wheel/./Bio/Align
2025-11-06 20:53:52,463 root INFO copying build/lib.linux-i686-cpython-312/Bio/Align/_pairwisealigner.c -> build/bdist.linux-i686/wheel/./Bio/Align
2025-11-06 20:53:52,463 root INFO copying build/lib.linux-i686-cpython-312/Bio/Align/phylip.py -> build/bdist.linux-i686/wheel/./Bio/Align
2025-11-06 20:53:52,464 root INFO creating build/bdist.linux-i686/wheel/Bio/Align/Applications
2025-11-06 20:53:52,464 root INFO copying build/lib.linux-i686-cpython-312/Bio/Align/Applications/_Mafft.py -> build/bdist.linux-i686/wheel/./Bio/Align/Applications
2025-11-06 20:53:52,464 root INFO copying build/lib.linux-i686-cpython-312/Bio/Align/Applications/_TCoffee.py -> build/bdist.linux-i686/wheel/./Bio/Align/Applications
2025-11-06 20:53:52,465 root INFO copying build/lib.linux-i686-cpython-312/Bio/Align/Applications/_Prank.py -> build/bdist.linux-i686/wheel/./Bio/Align/Applications
2025-11-06 20:53:52,465 root INFO copying build/lib.linux-i686-cpython-312/Bio/Align/Applications/_Dialign.py -> build/bdist.linux-i686/wheel/./Bio/Align/Applications
2025-11-06 20:53:52,465 root INFO copying build/lib.linux-i686-cpython-312/Bio/Align/Applications/_Probcons.py -> build/bdist.linux-i686/wheel/./Bio/Align/Applications
2025-11-06 20:53:52,466 root INFO copying build/lib.linux-i686-cpython-312/Bio/Align/Applications/__init__.py -> build/bdist.linux-i686/wheel/./Bio/Align/Applications
2025-11-06 20:53:52,466 root INFO copying build/lib.linux-i686-cpython-312/Bio/Align/Applications/_Muscle.py -> build/bdist.linux-i686/wheel/./Bio/Align/Applications
2025-11-06 20:53:52,466 root INFO copying build/lib.linux-i686-cpython-312/Bio/Align/Applications/_Clustalw.py -> build/bdist.linux-i686/wheel/./Bio/Align/Applications
2025-11-06 20:53:52,467 root INFO copying build/lib.linux-i686-cpython-312/Bio/Align/Applications/_MSAProbs.py -> build/bdist.linux-i686/wheel/./Bio/Align/Applications
2025-11-06 20:53:52,467 root INFO copying build/lib.linux-i686-cpython-312/Bio/Align/Applications/_ClustalOmega.py -> build/bdist.linux-i686/wheel/./Bio/Align/Applications
2025-11-06 20:53:52,467 root INFO copying build/lib.linux-i686-cpython-312/Bio/Align/bigpsl.py -> build/bdist.linux-i686/wheel/./Bio/Align
2025-11-06 20:53:52,468 root INFO creating build/bdist.linux-i686/wheel/Bio/Align/substitution_matrices
2025-11-06 20:53:52,468 root INFO copying build/lib.linux-i686-cpython-312/Bio/Align/substitution_matrices/__init__.py -> build/bdist.linux-i686/wheel/./Bio/Align/substitution_matrices
2025-11-06 20:53:52,469 root INFO creating build/bdist.linux-i686/wheel/Bio/Align/substitution_matrices/data
2025-11-06 20:53:52,469 root INFO copying build/lib.linux-i686-cpython-312/Bio/Align/substitution_matrices/data/BLOSUM50 -> build/bdist.linux-i686/wheel/./Bio/Align/substitution_matrices/data
2025-11-06 20:53:52,469 root INFO copying build/lib.linux-i686-cpython-312/Bio/Align/substitution_matrices/data/LEVIN -> build/bdist.linux-i686/wheel/./Bio/Align/substitution_matrices/data
2025-11-06 20:53:52,470 root INFO copying build/lib.linux-i686-cpython-312/Bio/Align/substitution_matrices/data/JOHNSON -> build/bdist.linux-i686/wheel/./Bio/Align/substitution_matrices/data
2025-11-06 20:53:52,470 root INFO copying build/lib.linux-i686-cpython-312/Bio/Align/substitution_matrices/data/BENNER74 -> build/bdist.linux-i686/wheel/./Bio/Align/substitution_matrices/data
2025-11-06 20:53:52,470 root INFO copying build/lib.linux-i686-cpython-312/Bio/Align/substitution_matrices/data/STR -> build/bdist.linux-i686/wheel/./Bio/Align/substitution_matrices/data
2025-11-06 20:53:52,471 root INFO copying build/lib.linux-i686-cpython-312/Bio/Align/substitution_matrices/data/NUC.4.4 -> build/bdist.linux-i686/wheel/./Bio/Align/substitution_matrices/data
2025-11-06 20:53:52,471 root INFO copying build/lib.linux-i686-cpython-312/Bio/Align/substitution_matrices/data/PAM70 -> build/bdist.linux-i686/wheel/./Bio/Align/substitution_matrices/data
2025-11-06 20:53:52,471 root INFO copying build/lib.linux-i686-cpython-312/Bio/Align/substitution_matrices/data/MCLACHLAN -> build/bdist.linux-i686/wheel/./Bio/Align/substitution_matrices/data
2025-11-06 20:53:52,471 root INFO copying build/lib.linux-i686-cpython-312/Bio/Align/substitution_matrices/data/MDM78 -> build/bdist.linux-i686/wheel/./Bio/Align/substitution_matrices/data
2025-11-06 20:53:52,472 root INFO copying build/lib.linux-i686-cpython-312/Bio/Align/substitution_matrices/data/BLOSUM80 -> build/bdist.linux-i686/wheel/./Bio/Align/substitution_matrices/data
2025-11-06 20:53:52,472 root INFO copying build/lib.linux-i686-cpython-312/Bio/Align/substitution_matrices/data/BLOSUM45 -> build/bdist.linux-i686/wheel/./Bio/Align/substitution_matrices/data
2025-11-06 20:53:52,472 root INFO copying build/lib.linux-i686-cpython-312/Bio/Align/substitution_matrices/data/BENNER6 -> build/bdist.linux-i686/wheel/./Bio/Align/substitution_matrices/data
2025-11-06 20:53:52,473 root INFO copying build/lib.linux-i686-cpython-312/Bio/Align/substitution_matrices/data/RAO -> build/bdist.linux-i686/wheel/./Bio/Align/substitution_matrices/data
2025-11-06 20:53:52,473 root INFO copying build/lib.linux-i686-cpython-312/Bio/Align/substitution_matrices/data/PAM30 -> build/bdist.linux-i686/wheel/./Bio/Align/substitution_matrices/data
2025-11-06 20:53:52,473 root INFO copying build/lib.linux-i686-cpython-312/Bio/Align/substitution_matrices/data/SCHNEIDER -> build/bdist.linux-i686/wheel/./Bio/Align/substitution_matrices/data
2025-11-06 20:53:52,474 root INFO copying build/lib.linux-i686-cpython-312/Bio/Align/substitution_matrices/data/BLOSUM90 -> build/bdist.linux-i686/wheel/./Bio/Align/substitution_matrices/data
2025-11-06 20:53:52,474 root INFO copying build/lib.linux-i686-cpython-312/Bio/Align/substitution_matrices/data/BLASTP -> build/bdist.linux-i686/wheel/./Bio/Align/substitution_matrices/data
2025-11-06 20:53:52,474 root INFO copying build/lib.linux-i686-cpython-312/Bio/Align/substitution_matrices/data/JONES -> build/bdist.linux-i686/wheel/./Bio/Align/substitution_matrices/data
2025-11-06 20:53:52,474 root INFO copying build/lib.linux-i686-cpython-312/Bio/Align/substitution_matrices/data/FENG -> build/bdist.linux-i686/wheel/./Bio/Align/substitution_matrices/data
2025-11-06 20:53:52,475 root INFO copying build/lib.linux-i686-cpython-312/Bio/Align/substitution_matrices/data/DAYHOFF -> build/bdist.linux-i686/wheel/./Bio/Align/substitution_matrices/data
2025-11-06 20:53:52,475 root INFO copying build/lib.linux-i686-cpython-312/Bio/Align/substitution_matrices/data/GONNET1992 -> build/bdist.linux-i686/wheel/./Bio/Align/substitution_matrices/data
2025-11-06 20:53:52,475 root INFO copying build/lib.linux-i686-cpython-312/Bio/Align/substitution_matrices/data/HOXD70 -> build/bdist.linux-i686/wheel/./Bio/Align/substitution_matrices/data
2025-11-06 20:53:52,476 root INFO copying build/lib.linux-i686-cpython-312/Bio/Align/substitution_matrices/data/RISLER -> build/bdist.linux-i686/wheel/./Bio/Align/substitution_matrices/data
2025-11-06 20:53:52,476 root INFO copying build/lib.linux-i686-cpython-312/Bio/Align/substitution_matrices/data/GENETIC -> build/bdist.linux-i686/wheel/./Bio/Align/substitution_matrices/data
2025-11-06 20:53:52,476 root INFO copying build/lib.linux-i686-cpython-312/Bio/Align/substitution_matrices/data/MEGABLAST -> build/bdist.linux-i686/wheel/./Bio/Align/substitution_matrices/data
2025-11-06 20:53:52,476 root INFO copying build/lib.linux-i686-cpython-312/Bio/Align/substitution_matrices/data/BLASTN -> build/bdist.linux-i686/wheel/./Bio/Align/substitution_matrices/data
2025-11-06 20:53:52,477 root INFO copying build/lib.linux-i686-cpython-312/Bio/Align/substitution_matrices/data/BLOSUM62 -> build/bdist.linux-i686/wheel/./Bio/Align/substitution_matrices/data
2025-11-06 20:53:52,477 root INFO copying build/lib.linux-i686-cpython-312/Bio/Align/substitution_matrices/data/TRANS -> build/bdist.linux-i686/wheel/./Bio/Align/substitution_matrices/data
2025-11-06 20:53:52,477 root INFO copying build/lib.linux-i686-cpython-312/Bio/Align/substitution_matrices/data/PAM250 -> build/bdist.linux-i686/wheel/./Bio/Align/substitution_matrices/data
2025-11-06 20:53:52,478 root INFO copying build/lib.linux-i686-cpython-312/Bio/Align/substitution_matrices/data/BENNER22 -> build/bdist.linux-i686/wheel/./Bio/Align/substitution_matrices/data
2025-11-06 20:53:52,478 root INFO copying build/lib.linux-i686-cpython-312/Bio/Align/psl.py -> build/bdist.linux-i686/wheel/./Bio/Align
2025-11-06 20:53:52,478 root INFO copying build/lib.linux-i686-cpython-312/Bio/Align/msf.py -> build/bdist.linux-i686/wheel/./Bio/Align
2025-11-06 20:53:52,479 root INFO copying build/lib.linux-i686-cpython-312/Bio/Align/exonerate.py -> build/bdist.linux-i686/wheel/./Bio/Align
2025-11-06 20:53:52,479 root INFO copying build/lib.linux-i686-cpython-312/Bio/Align/tabular.py -> build/bdist.linux-i686/wheel/./Bio/Align
2025-11-06 20:53:52,479 root INFO copying build/lib.linux-i686-cpython-312/Bio/Align/fasta.py -> build/bdist.linux-i686/wheel/./Bio/Align
2025-11-06 20:53:52,479 root INFO copying build/lib.linux-i686-cpython-312/Bio/Align/maf.py -> build/bdist.linux-i686/wheel/./Bio/Align
2025-11-06 20:53:52,480 root INFO copying build/lib.linux-i686-cpython-312/Bio/Align/_pairwisealigner.cpython-312-i386-linux-musl.so -> build/bdist.linux-i686/wheel/./Bio/Align
2025-11-06 20:53:52,480 root INFO copying build/lib.linux-i686-cpython-312/Bio/Align/bigbed.py -> build/bdist.linux-i686/wheel/./Bio/Align
2025-11-06 20:53:52,481 root INFO copying build/lib.linux-i686-cpython-312/Bio/Align/a2m.py -> build/bdist.linux-i686/wheel/./Bio/Align
2025-11-06 20:53:52,481 root INFO copying build/lib.linux-i686-cpython-312/Bio/Align/nexus.py -> build/bdist.linux-i686/wheel/./Bio/Align
2025-11-06 20:53:52,481 root INFO copying build/lib.linux-i686-cpython-312/Bio/Align/hhr.py -> build/bdist.linux-i686/wheel/./Bio/Align
2025-11-06 20:53:52,481 root INFO copying build/lib.linux-i686-cpython-312/Bio/Align/_aligncore.cpython-312-i386-linux-musl.so -> build/bdist.linux-i686/wheel/./Bio/Align
2025-11-06 20:53:52,482 root INFO copying build/lib.linux-i686-cpython-312/Bio/Align/emboss.py -> build/bdist.linux-i686/wheel/./Bio/Align
2025-11-06 20:53:52,482 root INFO copying build/lib.linux-i686-cpython-312/Bio/Align/bed.py -> build/bdist.linux-i686/wheel/./Bio/Align
2025-11-06 20:53:52,482 root INFO copying build/lib.linux-i686-cpython-312/Bio/Align/_aligncore.c -> build/bdist.linux-i686/wheel/./Bio/Align
2025-11-06 20:53:52,483 root INFO creating build/bdist.linux-i686/wheel/Bio/codonalign
2025-11-06 20:53:52,483 root INFO copying build/lib.linux-i686-cpython-312/Bio/codonalign/__init__.py -> build/bdist.linux-i686/wheel/./Bio/codonalign
2025-11-06 20:53:52,483 root INFO copying build/lib.linux-i686-cpython-312/Bio/codonalign/codonalignment.py -> build/bdist.linux-i686/wheel/./Bio/codonalign
2025-11-06 20:53:52,484 root INFO copying build/lib.linux-i686-cpython-312/Bio/codonalign/codonseq.py -> build/bdist.linux-i686/wheel/./Bio/codonalign
2025-11-06 20:53:52,484 root INFO creating build/bdist.linux-i686/wheel/Bio/Phylo
2025-11-06 20:53:52,484 root INFO copying build/lib.linux-i686-cpython-312/Bio/Phylo/PhyloXMLIO.py -> build/bdist.linux-i686/wheel/./Bio/Phylo
2025-11-06 20:53:52,485 root INFO copying build/lib.linux-i686-cpython-312/Bio/Phylo/CDAOIO.py -> build/bdist.linux-i686/wheel/./Bio/Phylo
2025-11-06 20:53:52,485 root INFO copying build/lib.linux-i686-cpython-312/Bio/Phylo/NeXMLIO.py -> build/bdist.linux-i686/wheel/./Bio/Phylo
2025-11-06 20:53:52,485 root INFO copying build/lib.linux-i686-cpython-312/Bio/Phylo/Newick.py -> build/bdist.linux-i686/wheel/./Bio/Phylo
2025-11-06 20:53:52,485 root INFO copying build/lib.linux-i686-cpython-312/Bio/Phylo/_cdao_owl.py -> build/bdist.linux-i686/wheel/./Bio/Phylo
2025-11-06 20:53:52,486 root INFO copying build/lib.linux-i686-cpython-312/Bio/Phylo/_utils.py -> build/bdist.linux-i686/wheel/./Bio/Phylo
2025-11-06 20:53:52,486 root INFO copying build/lib.linux-i686-cpython-312/Bio/Phylo/Consensus.py -> build/bdist.linux-i686/wheel/./Bio/Phylo
2025-11-06 20:53:52,486 root INFO copying build/lib.linux-i686-cpython-312/Bio/Phylo/__init__.py -> build/bdist.linux-i686/wheel/./Bio/Phylo
2025-11-06 20:53:52,487 root INFO creating build/bdist.linux-i686/wheel/Bio/Phylo/Applications
2025-11-06 20:53:52,487 root INFO copying build/lib.linux-i686-cpython-312/Bio/Phylo/Applications/_Phyml.py -> build/bdist.linux-i686/wheel/./Bio/Phylo/Applications
2025-11-06 20:53:52,487 root INFO copying build/lib.linux-i686-cpython-312/Bio/Phylo/Applications/__init__.py -> build/bdist.linux-i686/wheel/./Bio/Phylo/Applications
2025-11-06 20:53:52,488 root INFO copying build/lib.linux-i686-cpython-312/Bio/Phylo/Applications/_Raxml.py -> build/bdist.linux-i686/wheel/./Bio/Phylo/Applications
2025-11-06 20:53:52,488 root INFO copying build/lib.linux-i686-cpython-312/Bio/Phylo/Applications/_Fasttree.py -> build/bdist.linux-i686/wheel/./Bio/Phylo/Applications
2025-11-06 20:53:52,488 root INFO copying build/lib.linux-i686-cpython-312/Bio/Phylo/NexusIO.py -> build/bdist.linux-i686/wheel/./Bio/Phylo
2025-11-06 20:53:52,488 root INFO copying build/lib.linux-i686-cpython-312/Bio/Phylo/BaseTree.py -> build/bdist.linux-i686/wheel/./Bio/Phylo
2025-11-06 20:53:52,489 root INFO copying build/lib.linux-i686-cpython-312/Bio/Phylo/TreeConstruction.py -> build/bdist.linux-i686/wheel/./Bio/Phylo
2025-11-06 20:53:52,489 root INFO copying build/lib.linux-i686-cpython-312/Bio/Phylo/CDAO.py -> build/bdist.linux-i686/wheel/./Bio/Phylo
2025-11-06 20:53:52,489 root INFO creating build/bdist.linux-i686/wheel/Bio/Phylo/PAML
2025-11-06 20:53:52,490 root INFO copying build/lib.linux-i686-cpython-312/Bio/Phylo/PAML/_parse_yn00.py -> build/bdist.linux-i686/wheel/./Bio/Phylo/PAML
2025-11-06 20:53:52,490 root INFO copying build/lib.linux-i686-cpython-312/Bio/Phylo/PAML/__init__.py -> build/bdist.linux-i686/wheel/./Bio/Phylo/PAML
2025-11-06 20:53:52,490 root INFO copying build/lib.linux-i686-cpython-312/Bio/Phylo/PAML/_paml.py -> build/bdist.linux-i686/wheel/./Bio/Phylo/PAML
2025-11-06 20:53:52,490 root INFO copying build/lib.linux-i686-cpython-312/Bio/Phylo/PAML/_parse_codeml.py -> build/bdist.linux-i686/wheel/./Bio/Phylo/PAML
2025-11-06 20:53:52,491 root INFO copying build/lib.linux-i686-cpython-312/Bio/Phylo/PAML/chi2.py -> build/bdist.linux-i686/wheel/./Bio/Phylo/PAML
2025-11-06 20:53:52,491 root INFO copying build/lib.linux-i686-cpython-312/Bio/Phylo/PAML/yn00.py -> build/bdist.linux-i686/wheel/./Bio/Phylo/PAML
2025-11-06 20:53:52,491 root INFO copying build/lib.linux-i686-cpython-312/Bio/Phylo/PAML/baseml.py -> build/bdist.linux-i686/wheel/./Bio/Phylo/PAML
2025-11-06 20:53:52,492 root INFO copying build/lib.linux-i686-cpython-312/Bio/Phylo/PAML/codeml.py -> build/bdist.linux-i686/wheel/./Bio/Phylo/PAML
2025-11-06 20:53:52,492 root INFO copying build/lib.linux-i686-cpython-312/Bio/Phylo/PAML/_parse_baseml.py -> build/bdist.linux-i686/wheel/./Bio/Phylo/PAML
2025-11-06 20:53:52,492 root INFO copying build/lib.linux-i686-cpython-312/Bio/Phylo/_io.py -> build/bdist.linux-i686/wheel/./Bio/Phylo
2025-11-06 20:53:52,492 root INFO copying build/lib.linux-i686-cpython-312/Bio/Phylo/NewickIO.py -> build/bdist.linux-i686/wheel/./Bio/Phylo
2025-11-06 20:53:52,493 root INFO copying build/lib.linux-i686-cpython-312/Bio/Phylo/NeXML.py -> build/bdist.linux-i686/wheel/./Bio/Phylo
2025-11-06 20:53:52,493 root INFO copying build/lib.linux-i686-cpython-312/Bio/Phylo/PhyloXML.py -> build/bdist.linux-i686/wheel/./Bio/Phylo
2025-11-06 20:53:52,493 root INFO copying build/lib.linux-i686-cpython-312/Bio/Seq.py -> build/bdist.linux-i686/wheel/./Bio
2025-11-06 20:53:52,494 root INFO creating build/bdist.linux-i686/wheel/Bio/ExPASy
2025-11-06 20:53:52,494 root INFO copying build/lib.linux-i686-cpython-312/Bio/ExPASy/Prosite.py -> build/bdist.linux-i686/wheel/./Bio/ExPASy
2025-11-06 20:53:52,494 root INFO copying build/lib.linux-i686-cpython-312/Bio/ExPASy/__init__.py -> build/bdist.linux-i686/wheel/./Bio/ExPASy
2025-11-06 20:53:52,494 root INFO copying build/lib.linux-i686-cpython-312/Bio/ExPASy/cellosaurus.py -> build/bdist.linux-i686/wheel/./Bio/ExPASy
2025-11-06 20:53:52,495 root INFO copying build/lib.linux-i686-cpython-312/Bio/ExPASy/Prodoc.py -> build/bdist.linux-i686/wheel/./Bio/ExPASy
2025-11-06 20:53:52,495 root INFO copying build/lib.linux-i686-cpython-312/Bio/ExPASy/Enzyme.py -> build/bdist.linux-i686/wheel/./Bio/ExPASy
2025-11-06 20:53:52,495 root INFO copying build/lib.linux-i686-cpython-312/Bio/ExPASy/ScanProsite.py -> build/bdist.linux-i686/wheel/./Bio/ExPASy
2025-11-06 20:53:52,495 root INFO creating build/bdist.linux-i686/wheel/Bio/Medline
2025-11-06 20:53:52,496 root INFO copying build/lib.linux-i686-cpython-312/Bio/Medline/__init__.py -> build/bdist.linux-i686/wheel/./Bio/Medline
2025-11-06 20:53:52,496 root INFO creating build/bdist.linux-i686/wheel/Bio/Application
2025-11-06 20:53:52,496 root INFO copying build/lib.linux-i686-cpython-312/Bio/Application/__init__.py -> build/bdist.linux-i686/wheel/./Bio/Application
2025-11-06 20:53:52,497 root INFO creating build/bdist.linux-i686/wheel/Bio/SwissProt
2025-11-06 20:53:52,497 root INFO copying build/lib.linux-i686-cpython-312/Bio/SwissProt/KeyWList.py -> build/bdist.linux-i686/wheel/./Bio/SwissProt
2025-11-06 20:53:52,497 root INFO copying build/lib.linux-i686-cpython-312/Bio/SwissProt/__init__.py -> build/bdist.linux-i686/wheel/./Bio/SwissProt
2025-11-06 20:53:52,497 root INFO creating build/bdist.linux-i686/wheel/Bio/PopGen
2025-11-06 20:53:52,498 root INFO copying build/lib.linux-i686-cpython-312/Bio/PopGen/__init__.py -> build/bdist.linux-i686/wheel/./Bio/PopGen
2025-11-06 20:53:52,498 root INFO creating build/bdist.linux-i686/wheel/Bio/PopGen/GenePop
2025-11-06 20:53:52,498 root INFO copying build/lib.linux-i686-cpython-312/Bio/PopGen/GenePop/__init__.py -> build/bdist.linux-i686/wheel/./Bio/PopGen/GenePop
2025-11-06 20:53:52,499 root INFO copying build/lib.linux-i686-cpython-312/Bio/PopGen/GenePop/Controller.py -> build/bdist.linux-i686/wheel/./Bio/PopGen/GenePop
2025-11-06 20:53:52,499 root INFO copying build/lib.linux-i686-cpython-312/Bio/PopGen/GenePop/LargeFileParser.py -> build/bdist.linux-i686/wheel/./Bio/PopGen/GenePop
2025-11-06 20:53:52,499 root INFO copying build/lib.linux-i686-cpython-312/Bio/PopGen/GenePop/EasyController.py -> build/bdist.linux-i686/wheel/./Bio/PopGen/GenePop
2025-11-06 20:53:52,499 root INFO copying build/lib.linux-i686-cpython-312/Bio/PopGen/GenePop/FileParser.py -> build/bdist.linux-i686/wheel/./Bio/PopGen/GenePop
2025-11-06 20:53:52,500 root INFO creating build/bdist.linux-i686/wheel/Bio/HMM
2025-11-06 20:53:52,500 root INFO copying build/lib.linux-i686-cpython-312/Bio/HMM/__init__.py -> build/bdist.linux-i686/wheel/./Bio/HMM
2025-11-06 20:53:52,500 root INFO copying build/lib.linux-i686-cpython-312/Bio/HMM/DynamicProgramming.py -> build/bdist.linux-i686/wheel/./Bio/HMM
2025-11-06 20:53:52,500 root INFO copying build/lib.linux-i686-cpython-312/Bio/HMM/Trainer.py -> build/bdist.linux-i686/wheel/./Bio/HMM
2025-11-06 20:53:52,501 root INFO copying build/lib.linux-i686-cpython-312/Bio/HMM/MarkovModel.py -> build/bdist.linux-i686/wheel/./Bio/HMM
2025-11-06 20:53:52,501 root INFO copying build/lib.linux-i686-cpython-312/Bio/HMM/Utilities.py -> build/bdist.linux-i686/wheel/./Bio/HMM
2025-11-06 20:53:52,501 root INFO creating build/bdist.linux-i686/wheel/Bio/Restriction
2025-11-06 20:53:52,502 root INFO copying build/lib.linux-i686-cpython-312/Bio/Restriction/__init__.py -> build/bdist.linux-i686/wheel/./Bio/Restriction
2025-11-06 20:53:52,502 root INFO copying build/lib.linux-i686-cpython-312/Bio/Restriction/PrintFormat.py -> build/bdist.linux-i686/wheel/./Bio/Restriction
2025-11-06 20:53:52,502 root INFO copying build/lib.linux-i686-cpython-312/Bio/Restriction/Restriction.py -> build/bdist.linux-i686/wheel/./Bio/Restriction
2025-11-06 20:53:52,502 root INFO copying build/lib.linux-i686-cpython-312/Bio/Restriction/Restriction_Dictionary.py -> build/bdist.linux-i686/wheel/./Bio/Restriction
2025-11-06 20:53:52,503 root INFO creating build/bdist.linux-i686/wheel/Bio/Entrez
2025-11-06 20:53:52,504 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/Parser.py -> build/bdist.linux-i686/wheel/./Bio/Entrez
2025-11-06 20:53:52,504 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/__init__.py -> build/bdist.linux-i686/wheel/./Bio/Entrez
2025-11-06 20:53:52,505 root INFO creating build/bdist.linux-i686/wheel/Bio/Entrez/XSDs
2025-11-06 20:53:52,505 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/XSDs/NCBI_BlastOutput2.xsd -> build/bdist.linux-i686/wheel/./Bio/Entrez/XSDs
2025-11-06 20:53:52,505 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/XSDs/IPGReportSet.xsd -> build/bdist.linux-i686/wheel/./Bio/Entrez/XSDs
2025-11-06 20:53:52,505 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/XSDs/NCBI_BlastOutput2.mod.xsd -> build/bdist.linux-i686/wheel/./Bio/Entrez/XSDs
2025-11-06 20:53:52,506 root INFO creating build/bdist.linux-i686/wheel/Bio/Entrez/DTDs
2025-11-06 20:53:52,506 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_Pub.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,506 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/JATS-backmatter1-3.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,507 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/nlmcommon_090101.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,507 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/elink_020122.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,507 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/link.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,508 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_Access.mod.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,508 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_ObjPrt.mod.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,508 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/Docsum_3_1.mod.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,508 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/JATS-related-object1-3.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,509 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/pubmed_080101.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,509 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/Docsum_3_2.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,509 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/pubmed_090101.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,509 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/nlmmedlinecitationset_110101.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,510 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/MMDB_Structural_model.mod.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,510 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/MMDB_Chemical_graph.mod.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,510 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/bookdoc_120101.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,510 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/mathml2-qname-1.mod -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,511 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_Cn3d.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,511 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/eLink_090910.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,511 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/isogrk1.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,511 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/GenBank_General.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,512 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/chars.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,512 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/PRF_General.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,512 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/isogrk4.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,512 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_BioTree.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,513 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/JATS-phrase1-3.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,513 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_FeatDef.mod.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,513 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/esummary_clinvar.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,513 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_Mime.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,514 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_BlastDL.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,514 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/mathml2.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,514 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_TSeq.mod.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,514 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_PubMed.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,515 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/JATS-math1-3.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,515 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/INSD_INSDSeq.mod.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,515 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/nlmmedlinecitation_080101.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,515 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_Sequence.mod.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,516 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/phrase.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,516 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_Entrezgene.mod.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,516 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_Seq_split.mod.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,516 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/JATS-notat1-3.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,517 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/JATS-articlemeta1-3.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,517 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_Seqset.mod.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,517 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NSE.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,518 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/MMDB_Features.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,518 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/MMDB_Structural_model.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,518 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_Submit.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,518 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/BITS-embedded-index2.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,519 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_ID2Access.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,519 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/JATS-modules1-3.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,519 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/MMDB.mod.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,519 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/JATS-archivearticle1-3-mathml3.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,520 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_TxInit.mod.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,520 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_Seqres.mod.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,520 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/JATS-section1-3.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,520 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/xmlspecchars.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,521 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/nlmsharedcatcit_090101.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,521 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_Project.mod.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,521 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/nlmcommon_011101.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,521 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/math.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,522 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/isocyr2.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,522 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/nlmmedline_011101.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,522 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/PIR_General.mod.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,522 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/JATS-list1-3.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,523 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_Rsite.mod.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,523 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/nlmmedlinecitationset_100301.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,523 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_MedArchive.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,523 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/JATS-default-classes1-3.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,524 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/pubmed_150101.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,524 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_Pub.mod.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,524 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/pubmed_110101.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,525 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_Medlars.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,525 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/isoamsr.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,525 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_ScoreMat.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,525 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/esummary-v1.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,526 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/xhtml-table-1.mod -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,526 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/notat.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,526 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/bookdoc_100301.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,526 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_Cdd.mod.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,527 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/nlm-articleset-2.0.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,527 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/SP_General.mod.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,527 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/archivecustom-classes.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,527 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/nlmmedlinecitation_090101.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,528 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_BioSource.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,528 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_Entrezgene.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,528 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_BioTree.mod.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,528 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/JATS-chars1-3.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,529 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_Entrez2.mod.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,529 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/SP_General.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,529 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_PCAssay.mod.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,529 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/Docsum_3_3.mod.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,530 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_Medline.mod.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,530 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/elink.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,530 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/isobox.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,530 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_GBSeq.mod.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,531 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_Entrez2.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,531 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_TSeq.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,531 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/taxon.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,531 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/nlmserials_100101.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,532 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/XHTMLtablesetup.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,532 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_PCSubstance.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,532 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/pmc-1.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,533 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/EMBL_General.mod.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,533 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/bookdoc_110101.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,533 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/modules.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,533 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/JATS-link1-3.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,534 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_Mime.mod.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,534 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/isocyr1.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,534 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_Systems.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,534 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/pubmed_100101.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,535 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/JATS-archivecustom-modules1-3.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,535 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/htmltable.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,535 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/pubmed_190101.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,535 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/bookdoc_130101.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,536 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_General.mod.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,536 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/eSearch_020511.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,536 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_Organism.mod.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,536 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_Access.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,537 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/nlmmedlinecitationset_120101.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,537 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/nlmmedlinecitationset_130101.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,537 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_Protein.mod.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,537 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_Remap.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,538 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/mathml3-qname1.mod -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,538 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_Seqres.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,538 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_Project.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,538 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/mathml3.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,539 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/JATS-common1-3.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,539 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/eInfo_020511.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,539 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_PCAssay.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,540 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/epost.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,540 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/Docsum_3_4.mod.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,540 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_BioSource.mod.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,540 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_SeqTable.mod.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,541 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/eSpell.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,541 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/mathmlsetup.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,541 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/PDB_General.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,541 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_TxInit.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,542 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/isotech.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,542 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/format.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,542 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/OMSSA.mod.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,543 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/xhtml-inlstyle-1.mod -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,543 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/nlmmedlinecitationset_100101.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,543 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_Protein.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,543 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/bookdoc_140101.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,544 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/isoamsn.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,544 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/JATS-mathml3-modules1-3.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,544 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/bookdoc_150101.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,544 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/nlmmedlinecitationset_140101.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,545 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/mmlalias.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,545 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/archivecustom-mixes.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,545 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/GenBank_General.mod.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,546 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/esearch.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,546 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/isoamsb.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,546 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/JATS-archivecustom-models1-3.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,546 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/common.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,547 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_Seq_split.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,547 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/Docsum_3_1.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,547 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_Gene.mod.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,548 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/isoamsc.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,548 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/isomscr.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,548 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/INSD_INSDSeq.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,548 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/nlmserials_080101.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,549 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/nlmmedline_090101.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,549 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/JATS-references1-3.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,549 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/eLink_101123.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,549 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/Docsum_3_2.mod.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,550 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_BlastOutput.mod.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,550 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_Mim.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,550 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/archivecustom-modules.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,551 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/isogrk2.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,551 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/pubmed_100301.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,551 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/egquery.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,551 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_Biblio.mod.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,551 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_GBSeq.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,552 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/nlmmedlinecitationset_130501.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,552 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/mathml-in-pubmed.mod -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,552 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/mmlextra.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,553 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/HomoloGene.mod.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,553 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_Cdd.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,553 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/EMBL_General.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,553 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_RNA.mod.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,554 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/display.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,554 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_Seqloc.mod.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,554 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/isolat1.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,554 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/isogrk3.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,555 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_RNA.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,555 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/nlmcommon_080101.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,555 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/BITS-question-answer2.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,555 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/esummary_gene.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,556 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/JATS-para1-3.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,556 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/isopub.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,556 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/JATS-mathml3-mathmlsetup1-3.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,557 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_Blast4.mod.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,557 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/backmatter.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,557 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/eSummary_041029.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,557 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_FeatDef.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,558 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/JATS-format1-3.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,558 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/JATS-display1-3.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,558 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_ScoreMat.mod.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,559 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/PDB_General.mod.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,559 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/OMSSA.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,559 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/articlemeta.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,559 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/pubmed_180601.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,560 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/isomfrk.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,560 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/pubmed_130101.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,560 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_Rsite.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,560 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_Submit.mod.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,561 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_Biblio.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,561 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_Seqloc.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,561 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/Docsum_3_0.mod.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,561 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/nlmcatalogrecordset_170601.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,562 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/pubmed_180101.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,562 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/PRF_General.mod.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,562 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/pubmed_020114.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,563 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/section.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,563 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_Cn3d.mod.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,563 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_ID1Access.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,563 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_PCSubstance.mod.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,564 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_BlastOutput.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,564 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/para.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,564 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/MMDB_Chemical_graph.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,564 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_BlastDL.mod.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,565 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/nlmmedline_080101.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,565 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/nlmmedlinecitationset_150101.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,565 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_Blast4.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,565 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/JATS-archivecustom-classes1-3.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,566 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/HomoloGene.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,566 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/pubmed_130501.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,566 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_SeqTable.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,566 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/JATS-journalmeta1-3.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,567 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/isodia.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,567 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/JATS-default-mixes1-3.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,567 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_ObjPrt.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,568 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_Medline.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,568 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/nlmsharedcatcit_080101.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,568 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/JATS-XHTMLtablesetup1-3.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,568 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_SeqCode.mod.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,569 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/pubmed_120101.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,569 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/JATS-nlmcitation1-3.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,569 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_Mim.mod.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,569 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_SeqCode.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,570 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/archivearticle.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,570 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NSE.mod.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,570 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_ID1Access.mod.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,570 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_Organism.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,571 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_ID2Access.mod.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,571 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/JATS-common-atts1-3.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,571 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_Seqfeat.mod.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,571 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_Seqalign.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,572 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/isoamso.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,572 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/JATS-xmlspecchars1-3.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,572 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/default-mixes.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,573 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_Gene.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,573 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/JATS-funding1-3.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,573 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/einfo.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,573 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_Seqfeat.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,574 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_Seqalign.mod.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,574 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/isomopf.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,574 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_Medlars.mod.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,574 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_PubMed.mod.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,575 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_Variation.mod.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,575 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_all.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,575 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/isonum.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,575 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/default-classes.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,576 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/Docsum_3_3.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,576 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_General.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,576 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/MMDB.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,576 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/isoamsa.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,577 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/PIR_General.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,577 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/pubmed_140101.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,577 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_Seqset.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,577 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_Entity.mod.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,578 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/list.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,578 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_Sequence.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,578 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_MedArchive.mod.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,579 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/archivecustom-models.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,579 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/Docsum_3_0.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,579 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/journalmeta.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,579 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/JATS-ali-namespace1-3.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,580 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/isolat2.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,580 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/MMDB_Features.mod.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,580 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/nlmmedlinecitation_011101.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,580 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/Docsum_3_4.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,581 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_Remap.mod.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,581 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/JATS-archivecustom-mixes1-3.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,581 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/ePost_020511.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,581 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/references.ent -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,582 root INFO copying build/lib.linux-i686-cpython-312/Bio/Entrez/DTDs/NCBI_Variation.dtd -> build/bdist.linux-i686/wheel/./Bio/Entrez/DTDs
2025-11-06 20:53:52,582 root INFO creating build/bdist.linux-i686/wheel/Bio/TogoWS
2025-11-06 20:53:52,582 root INFO copying build/lib.linux-i686-cpython-312/Bio/TogoWS/__init__.py -> build/bdist.linux-i686/wheel/./Bio/TogoWS
2025-11-06 20:53:52,583 root INFO copying build/lib.linux-i686-cpython-312/Bio/SeqFeature.py -> build/bdist.linux-i686/wheel/./Bio
2025-11-06 20:53:52,583 root INFO copying build/lib.linux-i686-cpython-312/Bio/_utils.py -> build/bdist.linux-i686/wheel/./Bio
2025-11-06 20:53:52,583 root INFO creating build/bdist.linux-i686/wheel/Bio/UniGene
2025-11-06 20:53:52,584 root INFO copying build/lib.linux-i686-cpython-312/Bio/UniGene/__init__.py -> build/bdist.linux-i686/wheel/./Bio/UniGene
2025-11-06 20:53:52,584 root INFO copying build/lib.linux-i686-cpython-312/Bio/cpairwise2.cpython-312-i386-linux-musl.so -> build/bdist.linux-i686/wheel/./Bio
2025-11-06 20:53:52,584 root INFO creating build/bdist.linux-i686/wheel/Bio/Sequencing
2025-11-06 20:53:52,585 root INFO copying build/lib.linux-i686-cpython-312/Bio/Sequencing/Ace.py -> build/bdist.linux-i686/wheel/./Bio/Sequencing
2025-11-06 20:53:52,585 root INFO copying build/lib.linux-i686-cpython-312/Bio/Sequencing/__init__.py -> build/bdist.linux-i686/wheel/./Bio/Sequencing
2025-11-06 20:53:52,585 root INFO copying build/lib.linux-i686-cpython-312/Bio/Sequencing/Phd.py -> build/bdist.linux-i686/wheel/./Bio/Sequencing
2025-11-06 20:53:52,585 root INFO creating build/bdist.linux-i686/wheel/Bio/Sequencing/Applications
2025-11-06 20:53:52,586 root INFO copying build/lib.linux-i686-cpython-312/Bio/Sequencing/Applications/__init__.py -> build/bdist.linux-i686/wheel/./Bio/Sequencing/Applications
2025-11-06 20:53:52,586 root INFO copying build/lib.linux-i686-cpython-312/Bio/Sequencing/Applications/_Novoalign.py -> build/bdist.linux-i686/wheel/./Bio/Sequencing/Applications
2025-11-06 20:53:52,586 root INFO copying build/lib.linux-i686-cpython-312/Bio/Sequencing/Applications/_bwa.py -> build/bdist.linux-i686/wheel/./Bio/Sequencing/Applications
2025-11-06 20:53:52,586 root INFO copying build/lib.linux-i686-cpython-312/Bio/Sequencing/Applications/_samtools.py -> build/bdist.linux-i686/wheel/./Bio/Sequencing/Applications
2025-11-06 20:53:52,587 root INFO copying build/lib.linux-i686-cpython-312/Bio/kNN.py -> build/bdist.linux-i686/wheel/./Bio
2025-11-06 20:53:52,587 root INFO creating build/bdist.linux-i686/wheel/Bio/SeqIO
2025-11-06 20:53:52,587 root INFO copying build/lib.linux-i686-cpython-312/Bio/SeqIO/PhdIO.py -> build/bdist.linux-i686/wheel/./Bio/SeqIO
2025-11-06 20:53:52,588 root INFO copying build/lib.linux-i686-cpython-312/Bio/SeqIO/_index.py -> build/bdist.linux-i686/wheel/./Bio/SeqIO
2025-11-06 20:53:52,588 root INFO copying build/lib.linux-i686-cpython-312/Bio/SeqIO/SeqXmlIO.py -> build/bdist.linux-i686/wheel/./Bio/SeqIO
2025-11-06 20:53:52,588 root INFO copying build/lib.linux-i686-cpython-312/Bio/SeqIO/GckIO.py -> build/bdist.linux-i686/wheel/./Bio/SeqIO
2025-11-06 20:53:52,588 root INFO copying build/lib.linux-i686-cpython-312/Bio/SeqIO/PirIO.py -> build/bdist.linux-i686/wheel/./Bio/SeqIO
2025-11-06 20:53:52,589 root INFO copying build/lib.linux-i686-cpython-312/Bio/SeqIO/QualityIO.py -> build/bdist.linux-i686/wheel/./Bio/SeqIO
2025-11-06 20:53:52,589 root INFO copying build/lib.linux-i686-cpython-312/Bio/SeqIO/SwissIO.py -> build/bdist.linux-i686/wheel/./Bio/SeqIO
2025-11-06 20:53:52,589 root INFO copying build/lib.linux-i686-cpython-312/Bio/SeqIO/_twoBitIO.cpython-312-i386-linux-musl.so -> build/bdist.linux-i686/wheel/./Bio/SeqIO
2025-11-06 20:53:52,589 root INFO copying build/lib.linux-i686-cpython-312/Bio/SeqIO/Interfaces.py -> build/bdist.linux-i686/wheel/./Bio/SeqIO
2025-11-06 20:53:52,590 root INFO copying build/lib.linux-i686-cpython-312/Bio/SeqIO/TwoBitIO.py -> build/bdist.linux-i686/wheel/./Bio/SeqIO
2025-11-06 20:53:52,590 root INFO copying build/lib.linux-i686-cpython-312/Bio/SeqIO/IgIO.py -> build/bdist.linux-i686/wheel/./Bio/SeqIO
2025-11-06 20:53:52,590 root INFO copying build/lib.linux-i686-cpython-312/Bio/SeqIO/TabIO.py -> build/bdist.linux-i686/wheel/./Bio/SeqIO
2025-11-06 20:53:52,590 root INFO copying build/lib.linux-i686-cpython-312/Bio/SeqIO/XdnaIO.py -> build/bdist.linux-i686/wheel/./Bio/SeqIO
2025-11-06 20:53:52,591 root INFO copying build/lib.linux-i686-cpython-312/Bio/SeqIO/AbiIO.py -> build/bdist.linux-i686/wheel/./Bio/SeqIO
2025-11-06 20:53:52,591 root INFO copying build/lib.linux-i686-cpython-312/Bio/SeqIO/__init__.py -> build/bdist.linux-i686/wheel/./Bio/SeqIO
2025-11-06 20:53:52,591 root INFO copying build/lib.linux-i686-cpython-312/Bio/SeqIO/_twoBitIO.c -> build/bdist.linux-i686/wheel/./Bio/SeqIO
2025-11-06 20:53:52,592 root INFO copying build/lib.linux-i686-cpython-312/Bio/SeqIO/InsdcIO.py -> build/bdist.linux-i686/wheel/./Bio/SeqIO
2025-11-06 20:53:52,592 root INFO copying build/lib.linux-i686-cpython-312/Bio/SeqIO/GfaIO.py -> build/bdist.linux-i686/wheel/./Bio/SeqIO
2025-11-06 20:53:52,592 root INFO copying build/lib.linux-i686-cpython-312/Bio/SeqIO/UniprotIO.py -> build/bdist.linux-i686/wheel/./Bio/SeqIO
2025-11-06 20:53:52,592 root INFO copying build/lib.linux-i686-cpython-312/Bio/SeqIO/SnapGeneIO.py -> build/bdist.linux-i686/wheel/./Bio/SeqIO
2025-11-06 20:53:52,593 root INFO copying build/lib.linux-i686-cpython-312/Bio/SeqIO/SffIO.py -> build/bdist.linux-i686/wheel/./Bio/SeqIO
2025-11-06 20:53:52,593 root INFO copying build/lib.linux-i686-cpython-312/Bio/SeqIO/FastaIO.py -> build/bdist.linux-i686/wheel/./Bio/SeqIO
2025-11-06 20:53:52,593 root INFO copying build/lib.linux-i686-cpython-312/Bio/SeqIO/NibIO.py -> build/bdist.linux-i686/wheel/./Bio/SeqIO
2025-11-06 20:53:52,594 root INFO copying build/lib.linux-i686-cpython-312/Bio/SeqIO/AceIO.py -> build/bdist.linux-i686/wheel/./Bio/SeqIO
2025-11-06 20:53:52,594 root INFO copying build/lib.linux-i686-cpython-312/Bio/SeqIO/PdbIO.py -> build/bdist.linux-i686/wheel/./Bio/SeqIO
2025-11-06 20:53:52,594 root INFO copying build/lib.linux-i686-cpython-312/Bio/LogisticRegression.py -> build/bdist.linux-i686/wheel/./Bio
2025-11-06 20:53:52,594 root INFO creating build/bdist.linux-i686/wheel/Bio/Cluster
2025-11-06 20:53:52,595 root INFO copying build/lib.linux-i686-cpython-312/Bio/Cluster/clustermodule.c -> build/bdist.linux-i686/wheel/./Bio/Cluster
2025-11-06 20:53:52,595 root INFO copying build/lib.linux-i686-cpython-312/Bio/Cluster/cluster.h -> build/bdist.linux-i686/wheel/./Bio/Cluster
2025-11-06 20:53:52,595 root INFO copying build/lib.linux-i686-cpython-312/Bio/Cluster/cluster.c -> build/bdist.linux-i686/wheel/./Bio/Cluster
2025-11-06 20:53:52,596 root INFO copying build/lib.linux-i686-cpython-312/Bio/Cluster/__init__.py -> build/bdist.linux-i686/wheel/./Bio/Cluster
2025-11-06 20:53:52,596 root INFO copying build/lib.linux-i686-cpython-312/Bio/Cluster/_cluster.cpython-312-i386-linux-musl.so -> build/bdist.linux-i686/wheel/./Bio/Cluster
2025-11-06 20:53:52,596 root INFO creating build/bdist.linux-i686/wheel/Bio/UniProt
2025-11-06 20:53:52,597 root INFO copying build/lib.linux-i686-cpython-312/Bio/UniProt/GOA.py -> build/bdist.linux-i686/wheel/./Bio/UniProt
2025-11-06 20:53:52,597 root INFO copying build/lib.linux-i686-cpython-312/Bio/UniProt/__init__.py -> build/bdist.linux-i686/wheel/./Bio/UniProt
2025-11-06 20:53:52,597 root INFO creating build/bdist.linux-i686/wheel/Bio/KEGG
2025-11-06 20:53:52,598 root INFO creating build/bdist.linux-i686/wheel/Bio/KEGG/Enzyme
2025-11-06 20:53:52,598 root INFO copying build/lib.linux-i686-cpython-312/Bio/KEGG/Enzyme/__init__.py -> build/bdist.linux-i686/wheel/./Bio/KEGG/Enzyme
2025-11-06 20:53:52,598 root INFO creating build/bdist.linux-i686/wheel/Bio/KEGG/Gene
2025-11-06 20:53:52,598 root INFO copying build/lib.linux-i686-cpython-312/Bio/KEGG/Gene/__init__.py -> build/bdist.linux-i686/wheel/./Bio/KEGG/Gene
2025-11-06 20:53:52,599 root INFO copying build/lib.linux-i686-cpython-312/Bio/KEGG/__init__.py -> build/bdist.linux-i686/wheel/./Bio/KEGG
2025-11-06 20:53:52,599 root INFO creating build/bdist.linux-i686/wheel/Bio/KEGG/KGML
2025-11-06 20:53:52,599 root INFO copying build/lib.linux-i686-cpython-312/Bio/KEGG/KGML/KGML_pathway.py -> build/bdist.linux-i686/wheel/./Bio/KEGG/KGML
2025-11-06 20:53:52,599 root INFO copying build/lib.linux-i686-cpython-312/Bio/KEGG/KGML/KGML_parser.py -> build/bdist.linux-i686/wheel/./Bio/KEGG/KGML
2025-11-06 20:53:52,600 root INFO copying build/lib.linux-i686-cpython-312/Bio/KEGG/KGML/__init__.py -> build/bdist.linux-i686/wheel/./Bio/KEGG/KGML
2025-11-06 20:53:52,600 root INFO creating build/bdist.linux-i686/wheel/Bio/KEGG/Map
2025-11-06 20:53:52,600 root INFO copying build/lib.linux-i686-cpython-312/Bio/KEGG/Map/__init__.py -> build/bdist.linux-i686/wheel/./Bio/KEGG/Map
2025-11-06 20:53:52,601 root INFO creating build/bdist.linux-i686/wheel/Bio/KEGG/Compound
2025-11-06 20:53:52,601 root INFO copying build/lib.linux-i686-cpython-312/Bio/KEGG/Compound/__init__.py -> build/bdist.linux-i686/wheel/./Bio/KEGG/Compound
2025-11-06 20:53:52,601 root INFO copying build/lib.linux-i686-cpython-312/Bio/KEGG/REST.py -> build/bdist.linux-i686/wheel/./Bio/KEGG
2025-11-06 20:53:52,601 root INFO copying build/lib.linux-i686-cpython-312/Bio/MaxEntropy.py -> build/bdist.linux-i686/wheel/./Bio
2025-11-06 20:53:52,602 root INFO copying build/lib.linux-i686-cpython-312/Bio/__init__.py -> build/bdist.linux-i686/wheel/./Bio
2025-11-06 20:53:52,602 root INFO creating build/bdist.linux-i686/wheel/Bio/phenotype
2025-11-06 20:53:52,602 root INFO copying build/lib.linux-i686-cpython-312/Bio/phenotype/pm_fitting.py -> build/bdist.linux-i686/wheel/./Bio/phenotype
2025-11-06 20:53:52,602 root INFO copying build/lib.linux-i686-cpython-312/Bio/phenotype/__init__.py -> build/bdist.linux-i686/wheel/./Bio/phenotype
2025-11-06 20:53:52,603 root INFO copying build/lib.linux-i686-cpython-312/Bio/phenotype/phen_micro.py -> build/bdist.linux-i686/wheel/./Bio/phenotype
2025-11-06 20:53:52,603 root INFO copying build/lib.linux-i686-cpython-312/Bio/NaiveBayes.py -> build/bdist.linux-i686/wheel/./Bio
2025-11-06 20:53:52,603 root INFO creating build/bdist.linux-i686/wheel/Bio/Graphics
2025-11-06 20:53:52,603 root INFO copying build/lib.linux-i686-cpython-312/Bio/Graphics/DisplayRepresentation.py -> build/bdist.linux-i686/wheel/./Bio/Graphics
2025-11-06 20:53:52,604 root INFO copying build/lib.linux-i686-cpython-312/Bio/Graphics/BasicChromosome.py -> build/bdist.linux-i686/wheel/./Bio/Graphics
2025-11-06 20:53:52,604 root INFO copying build/lib.linux-i686-cpython-312/Bio/Graphics/ColorSpiral.py -> build/bdist.linux-i686/wheel/./Bio/Graphics
2025-11-06 20:53:52,604 root INFO copying build/lib.linux-i686-cpython-312/Bio/Graphics/__init__.py -> build/bdist.linux-i686/wheel/./Bio/Graphics
2025-11-06 20:53:52,605 root INFO copying build/lib.linux-i686-cpython-312/Bio/Graphics/KGML_vis.py -> build/bdist.linux-i686/wheel/./Bio/Graphics
2025-11-06 20:53:52,605 root INFO copying build/lib.linux-i686-cpython-312/Bio/Graphics/Comparative.py -> build/bdist.linux-i686/wheel/./Bio/Graphics
2025-11-06 20:53:52,605 root INFO copying build/lib.linux-i686-cpython-312/Bio/Graphics/Distribution.py -> build/bdist.linux-i686/wheel/./Bio/Graphics
2025-11-06 20:53:52,605 root INFO creating build/bdist.linux-i686/wheel/Bio/Graphics/GenomeDiagram
2025-11-06 20:53:52,606 root INFO copying build/lib.linux-i686-cpython-312/Bio/Graphics/GenomeDiagram/_AbstractDrawer.py -> build/bdist.linux-i686/wheel/./Bio/Graphics/GenomeDiagram
2025-11-06 20:53:52,606 root INFO copying build/lib.linux-i686-cpython-312/Bio/Graphics/GenomeDiagram/_GraphSet.py -> build/bdist.linux-i686/wheel/./Bio/Graphics/GenomeDiagram
2025-11-06 20:53:52,606 root INFO copying build/lib.linux-i686-cpython-312/Bio/Graphics/GenomeDiagram/_FeatureSet.py -> build/bdist.linux-i686/wheel/./Bio/Graphics/GenomeDiagram
2025-11-06 20:53:52,606 root INFO copying build/lib.linux-i686-cpython-312/Bio/Graphics/GenomeDiagram/_CircularDrawer.py -> build/bdist.linux-i686/wheel/./Bio/Graphics/GenomeDiagram
2025-11-06 20:53:52,607 root INFO copying build/lib.linux-i686-cpython-312/Bio/Graphics/GenomeDiagram/_Feature.py -> build/bdist.linux-i686/wheel/./Bio/Graphics/GenomeDiagram
2025-11-06 20:53:52,607 root INFO copying build/lib.linux-i686-cpython-312/Bio/Graphics/GenomeDiagram/_LinearDrawer.py -> build/bdist.linux-i686/wheel/./Bio/Graphics/GenomeDiagram
2025-11-06 20:53:52,607 root INFO copying build/lib.linux-i686-cpython-312/Bio/Graphics/GenomeDiagram/__init__.py -> build/bdist.linux-i686/wheel/./Bio/Graphics/GenomeDiagram
2025-11-06 20:53:52,608 root INFO copying build/lib.linux-i686-cpython-312/Bio/Graphics/GenomeDiagram/_Colors.py -> build/bdist.linux-i686/wheel/./Bio/Graphics/GenomeDiagram
2025-11-06 20:53:52,608 root INFO copying build/lib.linux-i686-cpython-312/Bio/Graphics/GenomeDiagram/_Graph.py -> build/bdist.linux-i686/wheel/./Bio/Graphics/GenomeDiagram
2025-11-06 20:53:52,608 root INFO copying build/lib.linux-i686-cpython-312/Bio/Graphics/GenomeDiagram/_Diagram.py -> build/bdist.linux-i686/wheel/./Bio/Graphics/GenomeDiagram
2025-11-06 20:53:52,608 root INFO copying build/lib.linux-i686-cpython-312/Bio/Graphics/GenomeDiagram/_Track.py -> build/bdist.linux-i686/wheel/./Bio/Graphics/GenomeDiagram
2025-11-06 20:53:52,609 root INFO copying build/lib.linux-i686-cpython-312/Bio/Graphics/GenomeDiagram/_CrossLink.py -> build/bdist.linux-i686/wheel/./Bio/Graphics/GenomeDiagram
2025-11-06 20:53:52,609 root INFO creating build/bdist.linux-i686/wheel/Bio/CAPS
2025-11-06 20:53:52,609 root INFO copying build/lib.linux-i686-cpython-312/Bio/CAPS/__init__.py -> build/bdist.linux-i686/wheel/./Bio/CAPS
2025-11-06 20:53:52,610 root INFO creating build/bdist.linux-i686/wheel/Bio/Alphabet
2025-11-06 20:53:52,610 root INFO copying build/lib.linux-i686-cpython-312/Bio/Alphabet/__init__.py -> build/bdist.linux-i686/wheel/./Bio/Alphabet
2025-11-06 20:53:52,610 root INFO creating build/bdist.linux-i686/wheel/Bio/GenBank
2025-11-06 20:53:52,610 root INFO copying build/lib.linux-i686-cpython-312/Bio/GenBank/Scanner.py -> build/bdist.linux-i686/wheel/./Bio/GenBank
2025-11-06 20:53:52,611 root INFO copying build/lib.linux-i686-cpython-312/Bio/GenBank/utils.py -> build/bdist.linux-i686/wheel/./Bio/GenBank
2025-11-06 20:53:52,611 root INFO copying build/lib.linux-i686-cpython-312/Bio/GenBank/Record.py -> build/bdist.linux-i686/wheel/./Bio/GenBank
2025-11-06 20:53:52,611 root INFO copying build/lib.linux-i686-cpython-312/Bio/GenBank/__init__.py -> build/bdist.linux-i686/wheel/./Bio/GenBank
2025-11-06 20:53:52,612 root INFO creating build/bdist.linux-i686/wheel/Bio/PDB
2025-11-06 20:53:52,612 root INFO copying build/lib.linux-i686-cpython-312/Bio/PDB/kdtrees.c -> build/bdist.linux-i686/wheel/./Bio/PDB
2025-11-06 20:53:52,612 root INFO copying build/lib.linux-i686-cpython-312/Bio/PDB/bcifhelpermodule.c -> build/bdist.linux-i686/wheel/./Bio/PDB
2025-11-06 20:53:52,612 root INFO copying build/lib.linux-i686-cpython-312/Bio/PDB/Atom.py -> build/bdist.linux-i686/wheel/./Bio/PDB
2025-11-06 20:53:52,613 root INFO copying build/lib.linux-i686-cpython-312/Bio/PDB/MMCIF2Dict.py -> build/bdist.linux-i686/wheel/./Bio/PDB
2025-11-06 20:53:52,613 root INFO copying build/lib.linux-i686-cpython-312/Bio/PDB/parse_pdb_header.py -> build/bdist.linux-i686/wheel/./Bio/PDB
2025-11-06 20:53:52,613 root INFO copying build/lib.linux-i686-cpython-312/Bio/PDB/DSSP.py -> build/bdist.linux-i686/wheel/./Bio/PDB
2025-11-06 20:53:52,613 root INFO copying build/lib.linux-i686-cpython-312/Bio/PDB/PSEA.py -> build/bdist.linux-i686/wheel/./Bio/PDB
2025-11-06 20:53:52,614 root INFO copying build/lib.linux-i686-cpython-312/Bio/PDB/mmcifio.py -> build/bdist.linux-i686/wheel/./Bio/PDB
2025-11-06 20:53:52,614 root INFO copying build/lib.linux-i686-cpython-312/Bio/PDB/binary_cif.py -> build/bdist.linux-i686/wheel/./Bio/PDB
2025-11-06 20:53:52,614 root INFO copying build/lib.linux-i686-cpython-312/Bio/PDB/ResidueDepth.py -> build/bdist.linux-i686/wheel/./Bio/PDB
2025-11-06 20:53:52,614 root INFO copying build/lib.linux-i686-cpython-312/Bio/PDB/Selection.py -> build/bdist.linux-i686/wheel/./Bio/PDB
2025-11-06 20:53:52,615 root INFO copying build/lib.linux-i686-cpython-312/Bio/PDB/PDBList.py -> build/bdist.linux-i686/wheel/./Bio/PDB
2025-11-06 20:53:52,615 root INFO copying build/lib.linux-i686-cpython-312/Bio/PDB/PDBParser.py -> build/bdist.linux-i686/wheel/./Bio/PDB
2025-11-06 20:53:52,615 root INFO copying build/lib.linux-i686-cpython-312/Bio/PDB/ccealign.cpython-312-i386-linux-musl.so -> build/bdist.linux-i686/wheel/./Bio/PDB
2025-11-06 20:53:52,616 root INFO copying build/lib.linux-i686-cpython-312/Bio/PDB/__init__.py -> build/bdist.linux-i686/wheel/./Bio/PDB
2025-11-06 20:53:52,616 root INFO copying build/lib.linux-i686-cpython-312/Bio/PDB/Model.py -> build/bdist.linux-i686/wheel/./Bio/PDB
2025-11-06 20:53:52,616 root INFO copying build/lib.linux-i686-cpython-312/Bio/PDB/FragmentMapper.py -> build/bdist.linux-i686/wheel/./Bio/PDB
2025-11-06 20:53:52,616 root INFO copying build/lib.linux-i686-cpython-312/Bio/PDB/PDBExceptions.py -> build/bdist.linux-i686/wheel/./Bio/PDB
2025-11-06 20:53:52,617 root INFO copying build/lib.linux-i686-cpython-312/Bio/PDB/PDBIO.py -> build/bdist.linux-i686/wheel/./Bio/PDB
2025-11-06 20:53:52,617 root INFO copying build/lib.linux-i686-cpython-312/Bio/PDB/ic_rebuild.py -> build/bdist.linux-i686/wheel/./Bio/PDB
2025-11-06 20:53:52,617 root INFO copying build/lib.linux-i686-cpython-312/Bio/PDB/StructureAlignment.py -> build/bdist.linux-i686/wheel/./Bio/PDB
2025-11-06 20:53:52,617 root INFO copying build/lib.linux-i686-cpython-312/Bio/PDB/vectors.py -> build/bdist.linux-i686/wheel/./Bio/PDB
2025-11-06 20:53:52,618 root INFO copying build/lib.linux-i686-cpython-312/Bio/PDB/Dice.py -> build/bdist.linux-i686/wheel/./Bio/PDB
2025-11-06 20:53:52,618 root INFO copying build/lib.linux-i686-cpython-312/Bio/PDB/qcprot.py -> build/bdist.linux-i686/wheel/./Bio/PDB
2025-11-06 20:53:52,618 root INFO copying build/lib.linux-i686-cpython-312/Bio/PDB/SCADIO.py -> build/bdist.linux-i686/wheel/./Bio/PDB
2025-11-06 20:53:52,618 root INFO copying build/lib.linux-i686-cpython-312/Bio/PDB/Structure.py -> build/bdist.linux-i686/wheel/./Bio/PDB
2025-11-06 20:53:52,619 root INFO copying build/lib.linux-i686-cpython-312/Bio/PDB/NeighborSearch.py -> build/bdist.linux-i686/wheel/./Bio/PDB
2025-11-06 20:53:52,619 root INFO copying build/lib.linux-i686-cpython-312/Bio/PDB/ccealignmodule.c -> build/bdist.linux-i686/wheel/./Bio/PDB
2025-11-06 20:53:52,619 root INFO copying build/lib.linux-i686-cpython-312/Bio/PDB/alphafold_db.py -> build/bdist.linux-i686/wheel/./Bio/PDB
2025-11-06 20:53:52,619 root INFO copying build/lib.linux-i686-cpython-312/Bio/PDB/StructureBuilder.py -> build/bdist.linux-i686/wheel/./Bio/PDB
2025-11-06 20:53:52,620 root INFO creating build/bdist.linux-i686/wheel/Bio/PDB/mmtf
2025-11-06 20:53:52,620 root INFO copying build/lib.linux-i686-cpython-312/Bio/PDB/mmtf/DefaultParser.py -> build/bdist.linux-i686/wheel/./Bio/PDB/mmtf
2025-11-06 20:53:52,620 root INFO copying build/lib.linux-i686-cpython-312/Bio/PDB/mmtf/__init__.py -> build/bdist.linux-i686/wheel/./Bio/PDB/mmtf
2025-11-06 20:53:52,620 root INFO copying build/lib.linux-i686-cpython-312/Bio/PDB/mmtf/mmtfio.py -> build/bdist.linux-i686/wheel/./Bio/PDB/mmtf
2025-11-06 20:53:52,621 root INFO copying build/lib.linux-i686-cpython-312/Bio/PDB/AbstractPropertyMap.py -> build/bdist.linux-i686/wheel/./Bio/PDB
2025-11-06 20:53:52,621 root INFO copying build/lib.linux-i686-cpython-312/Bio/PDB/Chain.py -> build/bdist.linux-i686/wheel/./Bio/PDB
2025-11-06 20:53:52,621 root INFO copying build/lib.linux-i686-cpython-312/Bio/PDB/Residue.py -> build/bdist.linux-i686/wheel/./Bio/PDB
2025-11-06 20:53:52,621 root INFO copying build/lib.linux-i686-cpython-312/Bio/PDB/Polypeptide.py -> build/bdist.linux-i686/wheel/./Bio/PDB
2025-11-06 20:53:52,622 root INFO copying build/lib.linux-i686-cpython-312/Bio/PDB/kdtrees.cpython-312-i386-linux-musl.so -> build/bdist.linux-i686/wheel/./Bio/PDB
2025-11-06 20:53:52,622 root INFO copying build/lib.linux-i686-cpython-312/Bio/PDB/cealign.py -> build/bdist.linux-i686/wheel/./Bio/PDB
2025-11-06 20:53:52,622 root INFO copying build/lib.linux-i686-cpython-312/Bio/PDB/Entity.py -> build/bdist.linux-i686/wheel/./Bio/PDB
2025-11-06 20:53:52,622 root INFO copying build/lib.linux-i686-cpython-312/Bio/PDB/SASA.py -> build/bdist.linux-i686/wheel/./Bio/PDB
2025-11-06 20:53:52,623 root INFO copying build/lib.linux-i686-cpython-312/Bio/PDB/NACCESS.py -> build/bdist.linux-i686/wheel/./Bio/PDB
2025-11-06 20:53:52,623 root INFO copying build/lib.linux-i686-cpython-312/Bio/PDB/Superimposer.py -> build/bdist.linux-i686/wheel/./Bio/PDB
2025-11-06 20:53:52,623 root INFO copying build/lib.linux-i686-cpython-312/Bio/PDB/PDBMLParser.py -> build/bdist.linux-i686/wheel/./Bio/PDB
2025-11-06 20:53:52,623 root INFO copying build/lib.linux-i686-cpython-312/Bio/PDB/ic_data.py -> build/bdist.linux-i686/wheel/./Bio/PDB
2025-11-06 20:53:52,624 root INFO copying build/lib.linux-i686-cpython-312/Bio/PDB/_bcif_helper.cpython-312-i386-linux-musl.so -> build/bdist.linux-i686/wheel/./Bio/PDB
2025-11-06 20:53:52,624 root INFO copying build/lib.linux-i686-cpython-312/Bio/PDB/internal_coords.py -> build/bdist.linux-i686/wheel/./Bio/PDB
2025-11-06 20:53:52,624 root INFO copying build/lib.linux-i686-cpython-312/Bio/PDB/MMCIFParser.py -> build/bdist.linux-i686/wheel/./Bio/PDB
2025-11-06 20:53:52,625 root INFO copying build/lib.linux-i686-cpython-312/Bio/PDB/PICIO.py -> build/bdist.linux-i686/wheel/./Bio/PDB
2025-11-06 20:53:52,625 root INFO copying build/lib.linux-i686-cpython-312/Bio/PDB/HSExposure.py -> build/bdist.linux-i686/wheel/./Bio/PDB
2025-11-06 20:53:52,625 root INFO creating build/bdist.linux-i686/wheel/Bio/SearchIO
2025-11-06 20:53:52,626 root INFO creating build/bdist.linux-i686/wheel/Bio/SearchIO/InterproscanIO
2025-11-06 20:53:52,626 root INFO copying build/lib.linux-i686-cpython-312/Bio/SearchIO/InterproscanIO/interproscan_xml.py -> build/bdist.linux-i686/wheel/./Bio/SearchIO/InterproscanIO
2025-11-06 20:53:52,626 root INFO copying build/lib.linux-i686-cpython-312/Bio/SearchIO/InterproscanIO/__init__.py -> build/bdist.linux-i686/wheel/./Bio/SearchIO/InterproscanIO
2025-11-06 20:53:52,626 root INFO copying build/lib.linux-i686-cpython-312/Bio/SearchIO/_index.py -> build/bdist.linux-i686/wheel/./Bio/SearchIO
2025-11-06 20:53:52,627 root INFO creating build/bdist.linux-i686/wheel/Bio/SearchIO/BlastIO
2025-11-06 20:53:52,627 root INFO copying build/lib.linux-i686-cpython-312/Bio/SearchIO/BlastIO/blast_tab.py -> build/bdist.linux-i686/wheel/./Bio/SearchIO/BlastIO
2025-11-06 20:53:52,627 root INFO copying build/lib.linux-i686-cpython-312/Bio/SearchIO/BlastIO/__init__.py -> build/bdist.linux-i686/wheel/./Bio/SearchIO/BlastIO
2025-11-06 20:53:52,628 root INFO copying build/lib.linux-i686-cpython-312/Bio/SearchIO/BlastIO/blast_xml.py -> build/bdist.linux-i686/wheel/./Bio/SearchIO/BlastIO
2025-11-06 20:53:52,628 root INFO copying build/lib.linux-i686-cpython-312/Bio/SearchIO/_utils.py -> build/bdist.linux-i686/wheel/./Bio/SearchIO
2025-11-06 20:53:52,628 root INFO copying build/lib.linux-i686-cpython-312/Bio/SearchIO/BlatIO.py -> build/bdist.linux-i686/wheel/./Bio/SearchIO
2025-11-06 20:53:52,628 root INFO copying build/lib.linux-i686-cpython-312/Bio/SearchIO/__init__.py -> build/bdist.linux-i686/wheel/./Bio/SearchIO
2025-11-06 20:53:52,629 root INFO creating build/bdist.linux-i686/wheel/Bio/SearchIO/_model
2025-11-06 20:53:52,629 root INFO copying build/lib.linux-i686-cpython-312/Bio/SearchIO/_model/_base.py -> build/bdist.linux-i686/wheel/./Bio/SearchIO/_model
2025-11-06 20:53:52,630 root INFO copying build/lib.linux-i686-cpython-312/Bio/SearchIO/_model/__init__.py -> build/bdist.linux-i686/wheel/./Bio/SearchIO/_model
2025-11-06 20:53:52,630 root INFO copying build/lib.linux-i686-cpython-312/Bio/SearchIO/_model/hit.py -> build/bdist.linux-i686/wheel/./Bio/SearchIO/_model
2025-11-06 20:53:52,630 root INFO copying build/lib.linux-i686-cpython-312/Bio/SearchIO/_model/query.py -> build/bdist.linux-i686/wheel/./Bio/SearchIO/_model
2025-11-06 20:53:52,630 root INFO copying build/lib.linux-i686-cpython-312/Bio/SearchIO/_model/hsp.py -> build/bdist.linux-i686/wheel/./Bio/SearchIO/_model
2025-11-06 20:53:52,631 root INFO creating build/bdist.linux-i686/wheel/Bio/SearchIO/HmmerIO
2025-11-06 20:53:52,631 root INFO copying build/lib.linux-i686-cpython-312/Bio/SearchIO/HmmerIO/hmmer3_text.py -> build/bdist.linux-i686/wheel/./Bio/SearchIO/HmmerIO
2025-11-06 20:53:52,631 root INFO copying build/lib.linux-i686-cpython-312/Bio/SearchIO/HmmerIO/_base.py -> build/bdist.linux-i686/wheel/./Bio/SearchIO/HmmerIO
2025-11-06 20:53:52,632 root INFO copying build/lib.linux-i686-cpython-312/Bio/SearchIO/HmmerIO/__init__.py -> build/bdist.linux-i686/wheel/./Bio/SearchIO/HmmerIO
2025-11-06 20:53:52,632 root INFO copying build/lib.linux-i686-cpython-312/Bio/SearchIO/HmmerIO/hmmer2_text.py -> build/bdist.linux-i686/wheel/./Bio/SearchIO/HmmerIO
2025-11-06 20:53:52,632 root INFO copying build/lib.linux-i686-cpython-312/Bio/SearchIO/HmmerIO/hmmer3_tab.py -> build/bdist.linux-i686/wheel/./Bio/SearchIO/HmmerIO
2025-11-06 20:53:52,632 root INFO copying build/lib.linux-i686-cpython-312/Bio/SearchIO/HmmerIO/hmmer3_domtab.py -> build/bdist.linux-i686/wheel/./Bio/SearchIO/HmmerIO
2025-11-06 20:53:52,633 root INFO creating build/bdist.linux-i686/wheel/Bio/SearchIO/ExonerateIO
2025-11-06 20:53:52,633 root INFO copying build/lib.linux-i686-cpython-312/Bio/SearchIO/ExonerateIO/_base.py -> build/bdist.linux-i686/wheel/./Bio/SearchIO/ExonerateIO
2025-11-06 20:53:52,633 root INFO copying build/lib.linux-i686-cpython-312/Bio/SearchIO/ExonerateIO/__init__.py -> build/bdist.linux-i686/wheel/./Bio/SearchIO/ExonerateIO
2025-11-06 20:53:52,633 root INFO copying build/lib.linux-i686-cpython-312/Bio/SearchIO/ExonerateIO/exonerate_cigar.py -> build/bdist.linux-i686/wheel/./Bio/SearchIO/ExonerateIO
2025-11-06 20:53:52,634 root INFO copying build/lib.linux-i686-cpython-312/Bio/SearchIO/ExonerateIO/exonerate_text.py -> build/bdist.linux-i686/wheel/./Bio/SearchIO/ExonerateIO
2025-11-06 20:53:52,634 root INFO copying build/lib.linux-i686-cpython-312/Bio/SearchIO/ExonerateIO/exonerate_vulgar.py -> build/bdist.linux-i686/wheel/./Bio/SearchIO/ExonerateIO
2025-11-06 20:53:52,634 root INFO copying build/lib.linux-i686-cpython-312/Bio/SearchIO/FastaIO.py -> build/bdist.linux-i686/wheel/./Bio/SearchIO
2025-11-06 20:53:52,635 root INFO creating build/bdist.linux-i686/wheel/Bio/SearchIO/HHsuiteIO
2025-11-06 20:53:52,635 root INFO copying build/lib.linux-i686-cpython-312/Bio/SearchIO/HHsuiteIO/__init__.py -> build/bdist.linux-i686/wheel/./Bio/SearchIO/HHsuiteIO
2025-11-06 20:53:52,635 root INFO copying build/lib.linux-i686-cpython-312/Bio/SearchIO/HHsuiteIO/hhsuite2_text.py -> build/bdist.linux-i686/wheel/./Bio/SearchIO/HHsuiteIO
2025-11-06 20:53:52,635 root INFO creating build/bdist.linux-i686/wheel/Bio/SeqUtils
2025-11-06 20:53:52,636 root INFO copying build/lib.linux-i686-cpython-312/Bio/SeqUtils/MeltingTemp.py -> build/bdist.linux-i686/wheel/./Bio/SeqUtils
2025-11-06 20:53:52,636 root INFO copying build/lib.linux-i686-cpython-312/Bio/SeqUtils/CheckSum.py -> build/bdist.linux-i686/wheel/./Bio/SeqUtils
2025-11-06 20:53:52,636 root INFO copying build/lib.linux-i686-cpython-312/Bio/SeqUtils/__init__.py -> build/bdist.linux-i686/wheel/./Bio/SeqUtils
2025-11-06 20:53:52,636 root INFO copying build/lib.linux-i686-cpython-312/Bio/SeqUtils/ProtParam.py -> build/bdist.linux-i686/wheel/./Bio/SeqUtils
2025-11-06 20:53:52,637 root INFO copying build/lib.linux-i686-cpython-312/Bio/SeqUtils/ProtParamData.py -> build/bdist.linux-i686/wheel/./Bio/SeqUtils
2025-11-06 20:53:52,637 root INFO copying build/lib.linux-i686-cpython-312/Bio/SeqUtils/IsoelectricPoint.py -> build/bdist.linux-i686/wheel/./Bio/SeqUtils
2025-11-06 20:53:52,637 root INFO copying build/lib.linux-i686-cpython-312/Bio/SeqUtils/lcc.py -> build/bdist.linux-i686/wheel/./Bio/SeqUtils
2025-11-06 20:53:52,638 root INFO copying build/lib.linux-i686-cpython-312/Bio/MarkovModel.py -> build/bdist.linux-i686/wheel/./Bio
2025-11-06 20:53:52,638 root INFO creating build/bdist.linux-i686/wheel/Bio/Emboss
2025-11-06 20:53:52,638 root INFO copying build/lib.linux-i686-cpython-312/Bio/Emboss/PrimerSearch.py -> build/bdist.linux-i686/wheel/./Bio/Emboss
2025-11-06 20:53:52,638 root INFO copying build/lib.linux-i686-cpython-312/Bio/Emboss/__init__.py -> build/bdist.linux-i686/wheel/./Bio/Emboss
2025-11-06 20:53:52,639 root INFO copying build/lib.linux-i686-cpython-312/Bio/Emboss/Applications.py -> build/bdist.linux-i686/wheel/./Bio/Emboss
2025-11-06 20:53:52,639 root INFO copying build/lib.linux-i686-cpython-312/Bio/Emboss/Primer3.py -> build/bdist.linux-i686/wheel/./Bio/Emboss
2025-11-06 20:53:52,639 root INFO copying build/lib.linux-i686-cpython-312/Bio/py.typed -> build/bdist.linux-i686/wheel/./Bio
2025-11-06 20:53:52,639 root INFO creating build/bdist.linux-i686/wheel/Bio/SCOP
2025-11-06 20:53:52,640 root INFO copying build/lib.linux-i686-cpython-312/Bio/SCOP/Dom.py -> build/bdist.linux-i686/wheel/./Bio/SCOP
2025-11-06 20:53:52,640 root INFO copying build/lib.linux-i686-cpython-312/Bio/SCOP/Raf.py -> build/bdist.linux-i686/wheel/./Bio/SCOP
2025-11-06 20:53:52,640 root INFO copying build/lib.linux-i686-cpython-312/Bio/SCOP/Hie.py -> build/bdist.linux-i686/wheel/./Bio/SCOP
2025-11-06 20:53:52,640 root INFO copying build/lib.linux-i686-cpython-312/Bio/SCOP/Residues.py -> build/bdist.linux-i686/wheel/./Bio/SCOP
2025-11-06 20:53:52,641 root INFO copying build/lib.linux-i686-cpython-312/Bio/SCOP/__init__.py -> build/bdist.linux-i686/wheel/./Bio/SCOP
2025-11-06 20:53:52,641 root INFO copying build/lib.linux-i686-cpython-312/Bio/SCOP/Des.py -> build/bdist.linux-i686/wheel/./Bio/SCOP
2025-11-06 20:53:52,641 root INFO copying build/lib.linux-i686-cpython-312/Bio/SCOP/Cla.py -> build/bdist.linux-i686/wheel/./Bio/SCOP
2025-11-06 20:53:52,642 root INFO creating build/bdist.linux-i686/wheel/Bio/Pathway
2025-11-06 20:53:52,642 root INFO creating build/bdist.linux-i686/wheel/Bio/Pathway/Rep
2025-11-06 20:53:52,642 root INFO copying build/lib.linux-i686-cpython-312/Bio/Pathway/Rep/__init__.py -> build/bdist.linux-i686/wheel/./Bio/Pathway/Rep
2025-11-06 20:53:52,642 root INFO copying build/lib.linux-i686-cpython-312/Bio/Pathway/Rep/MultiGraph.py -> build/bdist.linux-i686/wheel/./Bio/Pathway/Rep
2025-11-06 20:53:52,643 root INFO copying build/lib.linux-i686-cpython-312/Bio/Pathway/Rep/Graph.py -> build/bdist.linux-i686/wheel/./Bio/Pathway/Rep
2025-11-06 20:53:52,643 root INFO copying build/lib.linux-i686-cpython-312/Bio/Pathway/__init__.py -> build/bdist.linux-i686/wheel/./Bio/Pathway
2025-11-06 20:53:52,643 root INFO copying build/lib.linux-i686-cpython-312/Bio/File.py -> build/bdist.linux-i686/wheel/./Bio
2025-11-06 20:53:52,643 root INFO creating build/bdist.linux-i686/wheel/Bio/motifs
2025-11-06 20:53:52,644 root INFO copying build/lib.linux-i686-cpython-312/Bio/motifs/pfm.py -> build/bdist.linux-i686/wheel/./Bio/motifs
2025-11-06 20:53:52,644 root INFO copying build/lib.linux-i686-cpython-312/Bio/motifs/_pwm.cpython-312-i386-linux-musl.so -> build/bdist.linux-i686/wheel/./Bio/motifs
2025-11-06 20:53:52,644 root INFO copying build/lib.linux-i686-cpython-312/Bio/motifs/thresholds.py -> build/bdist.linux-i686/wheel/./Bio/motifs
2025-11-06 20:53:52,645 root INFO copying build/lib.linux-i686-cpython-312/Bio/motifs/matrix.py -> build/bdist.linux-i686/wheel/./Bio/motifs
2025-11-06 20:53:52,645 root INFO copying build/lib.linux-i686-cpython-312/Bio/motifs/alignace.py -> build/bdist.linux-i686/wheel/./Bio/motifs
2025-11-06 20:53:52,645 root INFO copying build/lib.linux-i686-cpython-312/Bio/motifs/_pwm.c -> build/bdist.linux-i686/wheel/./Bio/motifs
2025-11-06 20:53:52,645 root INFO copying build/lib.linux-i686-cpython-312/Bio/motifs/minimal.py -> build/bdist.linux-i686/wheel/./Bio/motifs
2025-11-06 20:53:52,646 root INFO copying build/lib.linux-i686-cpython-312/Bio/motifs/__init__.py -> build/bdist.linux-i686/wheel/./Bio/motifs
2025-11-06 20:53:52,646 root INFO copying build/lib.linux-i686-cpython-312/Bio/motifs/clusterbuster.py -> build/bdist.linux-i686/wheel/./Bio/motifs
2025-11-06 20:53:52,646 root INFO copying build/lib.linux-i686-cpython-312/Bio/motifs/transfac.py -> build/bdist.linux-i686/wheel/./Bio/motifs
2025-11-06 20:53:52,646 root INFO creating build/bdist.linux-i686/wheel/Bio/motifs/jaspar
2025-11-06 20:53:52,647 root INFO copying build/lib.linux-i686-cpython-312/Bio/motifs/jaspar/__init__.py -> build/bdist.linux-i686/wheel/./Bio/motifs/jaspar
2025-11-06 20:53:52,647 root INFO copying build/lib.linux-i686-cpython-312/Bio/motifs/jaspar/db.py -> build/bdist.linux-i686/wheel/./Bio/motifs/jaspar
2025-11-06 20:53:52,647 root INFO copying build/lib.linux-i686-cpython-312/Bio/motifs/xms.py -> build/bdist.linux-i686/wheel/./Bio/motifs
2025-11-06 20:53:52,647 root INFO creating build/bdist.linux-i686/wheel/Bio/motifs/applications
2025-11-06 20:53:52,648 root INFO copying build/lib.linux-i686-cpython-312/Bio/motifs/applications/__init__.py -> build/bdist.linux-i686/wheel/./Bio/motifs/applications
2025-11-06 20:53:52,648 root INFO copying build/lib.linux-i686-cpython-312/Bio/motifs/applications/_xxmotif.py -> build/bdist.linux-i686/wheel/./Bio/motifs/applications
2025-11-06 20:53:52,648 root INFO copying build/lib.linux-i686-cpython-312/Bio/motifs/mast.py -> build/bdist.linux-i686/wheel/./Bio/motifs
2025-11-06 20:53:52,648 root INFO copying build/lib.linux-i686-cpython-312/Bio/motifs/meme.py -> build/bdist.linux-i686/wheel/./Bio/motifs
2025-11-06 20:53:52,649 root INFO copying build/lib.linux-i686-cpython-312/Bio/SeqRecord.py -> build/bdist.linux-i686/wheel/./Bio
2025-11-06 20:53:52,649 root INFO creating build/bdist.linux-i686/wheel/Bio/SVDSuperimposer
2025-11-06 20:53:52,649 root INFO copying build/lib.linux-i686-cpython-312/Bio/SVDSuperimposer/__init__.py -> build/bdist.linux-i686/wheel/./Bio/SVDSuperimposer
2025-11-06 20:53:52,650 root INFO creating build/bdist.linux-i686/wheel/Bio/Nexus
2025-11-06 20:53:52,650 root INFO copying build/lib.linux-i686-cpython-312/Bio/Nexus/Nexus.py -> build/bdist.linux-i686/wheel/./Bio/Nexus
2025-11-06 20:53:52,650 root INFO copying build/lib.linux-i686-cpython-312/Bio/Nexus/cnexus.c -> build/bdist.linux-i686/wheel/./Bio/Nexus
2025-11-06 20:53:52,650 root INFO copying build/lib.linux-i686-cpython-312/Bio/Nexus/__init__.py -> build/bdist.linux-i686/wheel/./Bio/Nexus
2025-11-06 20:53:52,651 root INFO copying build/lib.linux-i686-cpython-312/Bio/Nexus/cnexus.cpython-312-i386-linux-musl.so -> build/bdist.linux-i686/wheel/./Bio/Nexus
2025-11-06 20:53:52,651 root INFO copying build/lib.linux-i686-cpython-312/Bio/Nexus/Nodes.py -> build/bdist.linux-i686/wheel/./Bio/Nexus
2025-11-06 20:53:52,651 root INFO copying build/lib.linux-i686-cpython-312/Bio/Nexus/StandardData.py -> build/bdist.linux-i686/wheel/./Bio/Nexus
2025-11-06 20:53:52,652 root INFO copying build/lib.linux-i686-cpython-312/Bio/Nexus/Trees.py -> build/bdist.linux-i686/wheel/./Bio/Nexus
2025-11-06 20:53:52,652 root INFO creating build/bdist.linux-i686/wheel/Bio/AlignIO
2025-11-06 20:53:52,652 root INFO copying build/lib.linux-i686-cpython-312/Bio/AlignIO/StockholmIO.py -> build/bdist.linux-i686/wheel/./Bio/AlignIO
2025-11-06 20:53:52,652 root INFO copying build/lib.linux-i686-cpython-312/Bio/AlignIO/PhylipIO.py -> build/bdist.linux-i686/wheel/./Bio/AlignIO
2025-11-06 20:53:52,653 root INFO copying build/lib.linux-i686-cpython-312/Bio/AlignIO/Interfaces.py -> build/bdist.linux-i686/wheel/./Bio/AlignIO
2025-11-06 20:53:52,653 root INFO copying build/lib.linux-i686-cpython-312/Bio/AlignIO/__init__.py -> build/bdist.linux-i686/wheel/./Bio/AlignIO
2025-11-06 20:53:52,653 root INFO copying build/lib.linux-i686-cpython-312/Bio/AlignIO/NexusIO.py -> build/bdist.linux-i686/wheel/./Bio/AlignIO
2025-11-06 20:53:52,653 root INFO copying build/lib.linux-i686-cpython-312/Bio/AlignIO/MauveIO.py -> build/bdist.linux-i686/wheel/./Bio/AlignIO
2025-11-06 20:53:52,654 root INFO copying build/lib.linux-i686-cpython-312/Bio/AlignIO/MsfIO.py -> build/bdist.linux-i686/wheel/./Bio/AlignIO
2025-11-06 20:53:52,654 root INFO copying build/lib.linux-i686-cpython-312/Bio/AlignIO/MafIO.py -> build/bdist.linux-i686/wheel/./Bio/AlignIO
2025-11-06 20:53:52,654 root INFO copying build/lib.linux-i686-cpython-312/Bio/AlignIO/FastaIO.py -> build/bdist.linux-i686/wheel/./Bio/AlignIO
2025-11-06 20:53:52,655 root INFO copying build/lib.linux-i686-cpython-312/Bio/AlignIO/ClustalIO.py -> build/bdist.linux-i686/wheel/./Bio/AlignIO
2025-11-06 20:53:52,655 root INFO copying build/lib.linux-i686-cpython-312/Bio/AlignIO/EmbossIO.py -> build/bdist.linux-i686/wheel/./Bio/AlignIO
2025-11-06 20:53:52,655 root INFO copying build/lib.linux-i686-cpython-312/Bio/bgzf.py -> build/bdist.linux-i686/wheel/./Bio
2025-11-06 20:53:52,655 root INFO creating build/bdist.linux-i686/wheel/Bio/Affy
2025-11-06 20:53:52,656 root INFO copying build/lib.linux-i686-cpython-312/Bio/Affy/CelFile.py -> build/bdist.linux-i686/wheel/./Bio/Affy
2025-11-06 20:53:52,656 root INFO copying build/lib.linux-i686-cpython-312/Bio/Affy/__init__.py -> build/bdist.linux-i686/wheel/./Bio/Affy
2025-11-06 20:53:52,656 root INFO creating build/bdist.linux-i686/wheel/Bio/Compass
2025-11-06 20:53:52,656 root INFO copying build/lib.linux-i686-cpython-312/Bio/Compass/__init__.py -> build/bdist.linux-i686/wheel/./Bio/Compass
2025-11-06 20:53:52,657 root INFO copying build/lib.linux-i686-cpython-312/Bio/pairwise2.py -> build/bdist.linux-i686/wheel/./Bio
2025-11-06 20:53:52,657 root INFO creating build/bdist.linux-i686/wheel/Bio/Data
2025-11-06 20:53:52,657 root INFO copying build/lib.linux-i686-cpython-312/Bio/Data/PDBData.py -> build/bdist.linux-i686/wheel/./Bio/Data
2025-11-06 20:53:52,658 root INFO copying build/lib.linux-i686-cpython-312/Bio/Data/IUPACData.py -> build/bdist.linux-i686/wheel/./Bio/Data
2025-11-06 20:53:52,658 root INFO copying build/lib.linux-i686-cpython-312/Bio/Data/__init__.py -> build/bdist.linux-i686/wheel/./Bio/Data
2025-11-06 20:53:52,658 root INFO copying build/lib.linux-i686-cpython-312/Bio/Data/CodonTable.py -> build/bdist.linux-i686/wheel/./Bio/Data
2025-11-06 20:53:52,658 root INFO creating build/bdist.linux-i686/wheel/Bio/Blast
2025-11-06 20:53:52,659 root INFO copying build/lib.linux-i686-cpython-312/Bio/Blast/NCBIWWW.py -> build/bdist.linux-i686/wheel/./Bio/Blast
2025-11-06 20:53:52,659 root INFO copying build/lib.linux-i686-cpython-312/Bio/Blast/NCBIXML.py -> build/bdist.linux-i686/wheel/./Bio/Blast
2025-11-06 20:53:52,659 root INFO copying build/lib.linux-i686-cpython-312/Bio/Blast/__init__.py -> build/bdist.linux-i686/wheel/./Bio/Blast
2025-11-06 20:53:52,660 root INFO copying build/lib.linux-i686-cpython-312/Bio/Blast/_writers.py -> build/bdist.linux-i686/wheel/./Bio/Blast
2025-11-06 20:53:52,660 root INFO copying build/lib.linux-i686-cpython-312/Bio/Blast/_parser.py -> build/bdist.linux-i686/wheel/./Bio/Blast
2025-11-06 20:53:52,660 root INFO copying build/lib.linux-i686-cpython-312/Bio/Blast/Applications.py -> build/bdist.linux-i686/wheel/./Bio/Blast
2025-11-06 20:53:52,661 root INFO creating build/bdist.linux-i686/wheel/Bio/NMR
2025-11-06 20:53:52,661 root INFO copying build/lib.linux-i686-cpython-312/Bio/NMR/__init__.py -> build/bdist.linux-i686/wheel/./Bio/NMR
2025-11-06 20:53:52,661 root INFO copying build/lib.linux-i686-cpython-312/Bio/NMR/xpktools.py -> build/bdist.linux-i686/wheel/./Bio/NMR
2025-11-06 20:53:52,661 root INFO copying build/lib.linux-i686-cpython-312/Bio/NMR/NOEtools.py -> build/bdist.linux-i686/wheel/./Bio/NMR
2025-11-06 20:53:52,662 root INFO creating build/bdist.linux-i686/wheel/BioSQL
2025-11-06 20:53:52,662 root INFO copying build/lib.linux-i686-cpython-312/BioSQL/DBUtils.py -> build/bdist.linux-i686/wheel/./BioSQL
2025-11-06 20:53:52,662 root INFO copying build/lib.linux-i686-cpython-312/BioSQL/BioSeq.py -> build/bdist.linux-i686/wheel/./BioSQL
2025-11-06 20:53:52,663 root INFO copying build/lib.linux-i686-cpython-312/BioSQL/__init__.py -> build/bdist.linux-i686/wheel/./BioSQL
2025-11-06 20:53:52,663 root INFO copying build/lib.linux-i686-cpython-312/BioSQL/py.typed -> build/bdist.linux-i686/wheel/./BioSQL
2025-11-06 20:53:52,663 root INFO copying build/lib.linux-i686-cpython-312/BioSQL/Loader.py -> build/bdist.linux-i686/wheel/./BioSQL
2025-11-06 20:53:52,663 root INFO copying build/lib.linux-i686-cpython-312/BioSQL/BioSeqDatabase.py -> build/bdist.linux-i686/wheel/./BioSQL
2025-11-06 20:53:52,664 root INFO running install_egg_info
2025-11-06 20:53:52,669 root INFO Copying biopython.egg-info to build/bdist.linux-i686/wheel/./biopython-1.85-py3.12.egg-info
2025-11-06 20:53:52,670 root INFO running install_scripts
2025-11-06 20:53:52,678 root INFO creating build/bdist.linux-i686/wheel/biopython-1.85.dist-info/WHEEL
2025-11-06 20:53:52,679 wheel INFO creating '/home/buildozer/aports/community/py3-biopython/src/biopython-1.85/.dist/.tmp-fnb891b4/biopython-1.85-cp312-cp312-linux_i686.whl' and adding 'build/bdist.linux-i686/wheel' to it
2025-11-06 20:53:52,680 wheel INFO adding 'Bio/File.py'
2025-11-06 20:53:52,680 wheel INFO adding 'Bio/LogisticRegression.py'
2025-11-06 20:53:52,681 wheel INFO adding 'Bio/MarkovModel.py'
2025-11-06 20:53:52,681 wheel INFO adding 'Bio/MaxEntropy.py'
2025-11-06 20:53:52,681 wheel INFO adding 'Bio/NaiveBayes.py'
2025-11-06 20:53:52,682 wheel INFO adding 'Bio/Seq.py'
2025-11-06 20:53:52,683 wheel INFO adding 'Bio/SeqFeature.py'
2025-11-06 20:53:52,684 wheel INFO adding 'Bio/SeqRecord.py'
2025-11-06 20:53:52,684 wheel INFO adding 'Bio/__init__.py'
2025-11-06 20:53:52,684 wheel INFO adding 'Bio/_utils.py'
2025-11-06 20:53:52,685 wheel INFO adding 'Bio/bgzf.py'
2025-11-06 20:53:52,685 wheel INFO adding 'Bio/cpairwise2.cpython-312-i386-linux-musl.so'
2025-11-06 20:53:52,686 wheel INFO adding 'Bio/cpairwise2module.c'
2025-11-06 20:53:52,686 wheel INFO adding 'Bio/kNN.py'
2025-11-06 20:53:52,687 wheel INFO adding 'Bio/pairwise2.py'
2025-11-06 20:53:52,687 wheel INFO adding 'Bio/py.typed'
2025-11-06 20:53:52,688 wheel INFO adding 'Bio/Affy/CelFile.py'
2025-11-06 20:53:52,688 wheel INFO adding 'Bio/Affy/__init__.py'
2025-11-06 20:53:52,689 wheel INFO adding 'Bio/Align/AlignInfo.py'
2025-11-06 20:53:52,689 wheel INFO adding 'Bio/Align/__init__.py'
2025-11-06 20:53:52,690 wheel INFO adding 'Bio/Align/_aligncore.c'
2025-11-06 20:53:52,691 wheel INFO adding 'Bio/Align/_aligncore.cpython-312-i386-linux-musl.so'
2025-11-06 20:53:52,691 wheel INFO adding 'Bio/Align/_codonaligner.c'
2025-11-06 20:53:52,692 wheel INFO adding 'Bio/Align/_codonaligner.cpython-312-i386-linux-musl.so'
2025-11-06 20:53:52,693 wheel INFO adding 'Bio/Align/_pairwisealigner.c'
2025-11-06 20:53:52,694 wheel INFO adding 'Bio/Align/_pairwisealigner.cpython-312-i386-linux-musl.so'
2025-11-06 20:53:52,695 wheel INFO adding 'Bio/Align/a2m.py'
2025-11-06 20:53:52,695 wheel INFO adding 'Bio/Align/analysis.py'
2025-11-06 20:53:52,696 wheel INFO adding 'Bio/Align/bed.py'
2025-11-06 20:53:52,696 wheel INFO adding 'Bio/Align/bigbed.py'
2025-11-06 20:53:52,697 wheel INFO adding 'Bio/Align/bigmaf.py'
2025-11-06 20:53:52,697 wheel INFO adding 'Bio/Align/bigpsl.py'
2025-11-06 20:53:52,698 wheel INFO adding 'Bio/Align/chain.py'
2025-11-06 20:53:52,698 wheel INFO adding 'Bio/Align/clustal.py'
2025-11-06 20:53:52,698 wheel INFO adding 'Bio/Align/emboss.py'
2025-11-06 20:53:52,699 wheel INFO adding 'Bio/Align/exonerate.py'
2025-11-06 20:53:52,699 wheel INFO adding 'Bio/Align/fasta.py'
2025-11-06 20:53:52,700 wheel INFO adding 'Bio/Align/hhr.py'
2025-11-06 20:53:52,700 wheel INFO adding 'Bio/Align/interfaces.py'
2025-11-06 20:53:52,700 wheel INFO adding 'Bio/Align/maf.py'
2025-11-06 20:53:52,701 wheel INFO adding 'Bio/Align/mauve.py'
2025-11-06 20:53:52,701 wheel INFO adding 'Bio/Align/msf.py'
2025-11-06 20:53:52,701 wheel INFO adding 'Bio/Align/nexus.py'
2025-11-06 20:53:52,702 wheel INFO adding 'Bio/Align/phylip.py'
2025-11-06 20:53:52,702 wheel INFO adding 'Bio/Align/psl.py'
2025-11-06 20:53:52,703 wheel INFO adding 'Bio/Align/sam.py'
2025-11-06 20:53:52,703 wheel INFO adding 'Bio/Align/stockholm.py'
2025-11-06 20:53:52,703 wheel INFO adding 'Bio/Align/tabular.py'
2025-11-06 20:53:52,704 wheel INFO adding 'Bio/Align/Applications/_ClustalOmega.py'
2025-11-06 20:53:52,704 wheel INFO adding 'Bio/Align/Applications/_Clustalw.py'
2025-11-06 20:53:52,705 wheel INFO adding 'Bio/Align/Applications/_Dialign.py'
2025-11-06 20:53:52,705 wheel INFO adding 'Bio/Align/Applications/_MSAProbs.py'
2025-11-06 20:53:52,705 wheel INFO adding 'Bio/Align/Applications/_Mafft.py'
2025-11-06 20:53:52,706 wheel INFO adding 'Bio/Align/Applications/_Muscle.py'
2025-11-06 20:53:52,706 wheel INFO adding 'Bio/Align/Applications/_Prank.py'
2025-11-06 20:53:52,706 wheel INFO adding 'Bio/Align/Applications/_Probcons.py'
2025-11-06 20:53:52,707 wheel INFO adding 'Bio/Align/Applications/_TCoffee.py'
2025-11-06 20:53:52,707 wheel INFO adding 'Bio/Align/Applications/__init__.py'
2025-11-06 20:53:52,707 wheel INFO adding 'Bio/Align/substitution_matrices/__init__.py'
2025-11-06 20:53:52,708 wheel INFO adding 'Bio/Align/substitution_matrices/data/BENNER22'
2025-11-06 20:53:52,708 wheel INFO adding 'Bio/Align/substitution_matrices/data/BENNER6'
2025-11-06 20:53:52,708 wheel INFO adding 'Bio/Align/substitution_matrices/data/BENNER74'
2025-11-06 20:53:52,708 wheel INFO adding 'Bio/Align/substitution_matrices/data/BLASTN'
2025-11-06 20:53:52,709 wheel INFO adding 'Bio/Align/substitution_matrices/data/BLASTP'
2025-11-06 20:53:52,709 wheel INFO adding 'Bio/Align/substitution_matrices/data/BLOSUM45'
2025-11-06 20:53:52,709 wheel INFO adding 'Bio/Align/substitution_matrices/data/BLOSUM50'
2025-11-06 20:53:52,709 wheel INFO adding 'Bio/Align/substitution_matrices/data/BLOSUM62'
2025-11-06 20:53:52,710 wheel INFO adding 'Bio/Align/substitution_matrices/data/BLOSUM80'
2025-11-06 20:53:52,710 wheel INFO adding 'Bio/Align/substitution_matrices/data/BLOSUM90'
2025-11-06 20:53:52,710 wheel INFO adding 'Bio/Align/substitution_matrices/data/DAYHOFF'
2025-11-06 20:53:52,710 wheel INFO adding 'Bio/Align/substitution_matrices/data/FENG'
2025-11-06 20:53:52,711 wheel INFO adding 'Bio/Align/substitution_matrices/data/GENETIC'
2025-11-06 20:53:52,711 wheel INFO adding 'Bio/Align/substitution_matrices/data/GONNET1992'
2025-11-06 20:53:52,711 wheel INFO adding 'Bio/Align/substitution_matrices/data/HOXD70'
2025-11-06 20:53:52,711 wheel INFO adding 'Bio/Align/substitution_matrices/data/JOHNSON'
2025-11-06 20:53:52,712 wheel INFO adding 'Bio/Align/substitution_matrices/data/JONES'
2025-11-06 20:53:52,712 wheel INFO adding 'Bio/Align/substitution_matrices/data/LEVIN'
2025-11-06 20:53:52,712 wheel INFO adding 'Bio/Align/substitution_matrices/data/MCLACHLAN'
2025-11-06 20:53:52,712 wheel INFO adding 'Bio/Align/substitution_matrices/data/MDM78'
2025-11-06 20:53:52,713 wheel INFO adding 'Bio/Align/substitution_matrices/data/MEGABLAST'
2025-11-06 20:53:52,713 wheel INFO adding 'Bio/Align/substitution_matrices/data/NUC.4.4'
2025-11-06 20:53:52,713 wheel INFO adding 'Bio/Align/substitution_matrices/data/PAM250'
2025-11-06 20:53:52,713 wheel INFO adding 'Bio/Align/substitution_matrices/data/PAM30'
2025-11-06 20:53:52,714 wheel INFO adding 'Bio/Align/substitution_matrices/data/PAM70'
2025-11-06 20:53:52,714 wheel INFO adding 'Bio/Align/substitution_matrices/data/RAO'
2025-11-06 20:53:52,714 wheel INFO adding 'Bio/Align/substitution_matrices/data/RISLER'
2025-11-06 20:53:52,715 wheel INFO adding 'Bio/Align/substitution_matrices/data/SCHNEIDER'
2025-11-06 20:53:52,715 wheel INFO adding 'Bio/Align/substitution_matrices/data/STR'
2025-11-06 20:53:52,715 wheel INFO adding 'Bio/Align/substitution_matrices/data/TRANS'
2025-11-06 20:53:52,715 wheel INFO adding 'Bio/AlignIO/ClustalIO.py'
2025-11-06 20:53:52,716 wheel INFO adding 'Bio/AlignIO/EmbossIO.py'
2025-11-06 20:53:52,716 wheel INFO adding 'Bio/AlignIO/FastaIO.py'
2025-11-06 20:53:52,716 wheel INFO adding 'Bio/AlignIO/Interfaces.py'
2025-11-06 20:53:52,717 wheel INFO adding 'Bio/AlignIO/MafIO.py'
2025-11-06 20:53:52,717 wheel INFO adding 'Bio/AlignIO/MauveIO.py'
2025-11-06 20:53:52,718 wheel INFO adding 'Bio/AlignIO/MsfIO.py'
2025-11-06 20:53:52,718 wheel INFO adding 'Bio/AlignIO/NexusIO.py'
2025-11-06 20:53:52,718 wheel INFO adding 'Bio/AlignIO/PhylipIO.py'
2025-11-06 20:53:52,719 wheel INFO adding 'Bio/AlignIO/StockholmIO.py'
2025-11-06 20:53:52,719 wheel INFO adding 'Bio/AlignIO/__init__.py'
2025-11-06 20:53:52,719 wheel INFO adding 'Bio/Alphabet/__init__.py'
2025-11-06 20:53:52,720 wheel INFO adding 'Bio/Application/__init__.py'
2025-11-06 20:53:52,720 wheel INFO adding 'Bio/Blast/Applications.py'
2025-11-06 20:53:52,721 wheel INFO adding 'Bio/Blast/NCBIWWW.py'
2025-11-06 20:53:52,721 wheel INFO adding 'Bio/Blast/NCBIXML.py'
2025-11-06 20:53:52,722 wheel INFO adding 'Bio/Blast/__init__.py'
2025-11-06 20:53:52,722 wheel INFO adding 'Bio/Blast/_parser.py'
2025-11-06 20:53:52,723 wheel INFO adding 'Bio/Blast/_writers.py'
2025-11-06 20:53:52,723 wheel INFO adding 'Bio/CAPS/__init__.py'
2025-11-06 20:53:52,724 wheel INFO adding 'Bio/Cluster/__init__.py'
2025-11-06 20:53:52,724 wheel INFO adding 'Bio/Cluster/_cluster.cpython-312-i386-linux-musl.so'
2025-11-06 20:53:52,725 wheel INFO adding 'Bio/Cluster/cluster.c'
2025-11-06 20:53:52,726 wheel INFO adding 'Bio/Cluster/cluster.h'
2025-11-06 20:53:52,726 wheel INFO adding 'Bio/Cluster/clustermodule.c'
2025-11-06 20:53:52,727 wheel INFO adding 'Bio/Compass/__init__.py'
2025-11-06 20:53:52,727 wheel INFO adding 'Bio/Data/CodonTable.py'
2025-11-06 20:53:52,728 wheel INFO adding 'Bio/Data/IUPACData.py'
2025-11-06 20:53:52,728 wheel INFO adding 'Bio/Data/PDBData.py'
2025-11-06 20:53:52,729 wheel INFO adding 'Bio/Data/__init__.py'
2025-11-06 20:53:52,729 wheel INFO adding 'Bio/Emboss/Applications.py'
2025-11-06 20:53:52,729 wheel INFO adding 'Bio/Emboss/Primer3.py'
2025-11-06 20:53:52,730 wheel INFO adding 'Bio/Emboss/PrimerSearch.py'
2025-11-06 20:53:52,730 wheel INFO adding 'Bio/Emboss/__init__.py'
2025-11-06 20:53:52,730 wheel INFO adding 'Bio/Entrez/Parser.py'
2025-11-06 20:53:52,731 wheel INFO adding 'Bio/Entrez/__init__.py'
2025-11-06 20:53:52,732 wheel INFO adding 'Bio/Entrez/DTDs/BITS-embedded-index2.ent'
2025-11-06 20:53:52,732 wheel INFO adding 'Bio/Entrez/DTDs/BITS-question-answer2.ent'
2025-11-06 20:53:52,732 wheel INFO adding 'Bio/Entrez/DTDs/Docsum_3_0.dtd'
2025-11-06 20:53:52,733 wheel INFO adding 'Bio/Entrez/DTDs/Docsum_3_0.mod.dtd'
2025-11-06 20:53:52,733 wheel INFO adding 'Bio/Entrez/DTDs/Docsum_3_1.dtd'
2025-11-06 20:53:52,734 wheel INFO adding 'Bio/Entrez/DTDs/Docsum_3_1.mod.dtd'
2025-11-06 20:53:52,734 wheel INFO adding 'Bio/Entrez/DTDs/Docsum_3_2.dtd'
2025-11-06 20:53:52,734 wheel INFO adding 'Bio/Entrez/DTDs/Docsum_3_2.mod.dtd'
2025-11-06 20:53:52,735 wheel INFO adding 'Bio/Entrez/DTDs/Docsum_3_3.dtd'
2025-11-06 20:53:52,735 wheel INFO adding 'Bio/Entrez/DTDs/Docsum_3_3.mod.dtd'
2025-11-06 20:53:52,735 wheel INFO adding 'Bio/Entrez/DTDs/Docsum_3_4.dtd'
2025-11-06 20:53:52,736 wheel INFO adding 'Bio/Entrez/DTDs/Docsum_3_4.mod.dtd'
2025-11-06 20:53:52,736 wheel INFO adding 'Bio/Entrez/DTDs/EMBL_General.dtd'
2025-11-06 20:53:52,736 wheel INFO adding 'Bio/Entrez/DTDs/EMBL_General.mod.dtd'
2025-11-06 20:53:52,737 wheel INFO adding 'Bio/Entrez/DTDs/GenBank_General.dtd'
2025-11-06 20:53:52,737 wheel INFO adding 'Bio/Entrez/DTDs/GenBank_General.mod.dtd'
2025-11-06 20:53:52,737 wheel INFO adding 'Bio/Entrez/DTDs/HomoloGene.dtd'
2025-11-06 20:53:52,737 wheel INFO adding 'Bio/Entrez/DTDs/HomoloGene.mod.dtd'
2025-11-06 20:53:52,738 wheel INFO adding 'Bio/Entrez/DTDs/INSD_INSDSeq.dtd'
2025-11-06 20:53:52,738 wheel INFO adding 'Bio/Entrez/DTDs/INSD_INSDSeq.mod.dtd'
2025-11-06 20:53:52,738 wheel INFO adding 'Bio/Entrez/DTDs/JATS-XHTMLtablesetup1-3.ent'
2025-11-06 20:53:52,739 wheel INFO adding 'Bio/Entrez/DTDs/JATS-ali-namespace1-3.ent'
2025-11-06 20:53:52,739 wheel INFO adding 'Bio/Entrez/DTDs/JATS-archivearticle1-3-mathml3.dtd'
2025-11-06 20:53:52,740 wheel INFO adding 'Bio/Entrez/DTDs/JATS-archivecustom-classes1-3.ent'
2025-11-06 20:53:52,740 wheel INFO adding 'Bio/Entrez/DTDs/JATS-archivecustom-mixes1-3.ent'
2025-11-06 20:53:52,741 wheel INFO adding 'Bio/Entrez/DTDs/JATS-archivecustom-models1-3.ent'
2025-11-06 20:53:52,741 wheel INFO adding 'Bio/Entrez/DTDs/JATS-archivecustom-modules1-3.ent'
2025-11-06 20:53:52,742 wheel INFO adding 'Bio/Entrez/DTDs/JATS-articlemeta1-3.ent'
2025-11-06 20:53:52,743 wheel INFO adding 'Bio/Entrez/DTDs/JATS-backmatter1-3.ent'
2025-11-06 20:53:52,743 wheel INFO adding 'Bio/Entrez/DTDs/JATS-chars1-3.ent'
2025-11-06 20:53:52,744 wheel INFO adding 'Bio/Entrez/DTDs/JATS-common-atts1-3.ent'
2025-11-06 20:53:52,744 wheel INFO adding 'Bio/Entrez/DTDs/JATS-common1-3.ent'
2025-11-06 20:53:52,746 wheel INFO adding 'Bio/Entrez/DTDs/JATS-default-classes1-3.ent'
2025-11-06 20:53:52,746 wheel INFO adding 'Bio/Entrez/DTDs/JATS-default-mixes1-3.ent'
2025-11-06 20:53:52,747 wheel INFO adding 'Bio/Entrez/DTDs/JATS-display1-3.ent'
2025-11-06 20:53:52,747 wheel INFO adding 'Bio/Entrez/DTDs/JATS-format1-3.ent'
2025-11-06 20:53:52,748 wheel INFO adding 'Bio/Entrez/DTDs/JATS-funding1-3.ent'
2025-11-06 20:53:52,748 wheel INFO adding 'Bio/Entrez/DTDs/JATS-journalmeta1-3.ent'
2025-11-06 20:53:52,749 wheel INFO adding 'Bio/Entrez/DTDs/JATS-link1-3.ent'
2025-11-06 20:53:52,749 wheel INFO adding 'Bio/Entrez/DTDs/JATS-list1-3.ent'
2025-11-06 20:53:52,750 wheel INFO adding 'Bio/Entrez/DTDs/JATS-math1-3.ent'
2025-11-06 20:53:52,750 wheel INFO adding 'Bio/Entrez/DTDs/JATS-mathml3-mathmlsetup1-3.ent'
2025-11-06 20:53:52,751 wheel INFO adding 'Bio/Entrez/DTDs/JATS-mathml3-modules1-3.ent'
2025-11-06 20:53:52,751 wheel INFO adding 'Bio/Entrez/DTDs/JATS-modules1-3.ent'
2025-11-06 20:53:52,751 wheel INFO adding 'Bio/Entrez/DTDs/JATS-nlmcitation1-3.ent'
2025-11-06 20:53:52,752 wheel INFO adding 'Bio/Entrez/DTDs/JATS-notat1-3.ent'
2025-11-06 20:53:52,752 wheel INFO adding 'Bio/Entrez/DTDs/JATS-para1-3.ent'
2025-11-06 20:53:52,753 wheel INFO adding 'Bio/Entrez/DTDs/JATS-phrase1-3.ent'
2025-11-06 20:53:52,753 wheel INFO adding 'Bio/Entrez/DTDs/JATS-references1-3.ent'
2025-11-06 20:53:52,754 wheel INFO adding 'Bio/Entrez/DTDs/JATS-related-object1-3.ent'
2025-11-06 20:53:52,755 wheel INFO adding 'Bio/Entrez/DTDs/JATS-section1-3.ent'
2025-11-06 20:53:52,755 wheel INFO adding 'Bio/Entrez/DTDs/JATS-xmlspecchars1-3.ent'
2025-11-06 20:53:52,755 wheel INFO adding 'Bio/Entrez/DTDs/MMDB.dtd'
2025-11-06 20:53:52,756 wheel INFO adding 'Bio/Entrez/DTDs/MMDB.mod.dtd'
2025-11-06 20:53:52,756 wheel INFO adding 'Bio/Entrez/DTDs/MMDB_Chemical_graph.dtd'
2025-11-06 20:53:52,756 wheel INFO adding 'Bio/Entrez/DTDs/MMDB_Chemical_graph.mod.dtd'
2025-11-06 20:53:52,756 wheel INFO adding 'Bio/Entrez/DTDs/MMDB_Features.dtd'
2025-11-06 20:53:52,757 wheel INFO adding 'Bio/Entrez/DTDs/MMDB_Features.mod.dtd'
2025-11-06 20:53:52,757 wheel INFO adding 'Bio/Entrez/DTDs/MMDB_Structural_model.dtd'
2025-11-06 20:53:52,758 wheel INFO adding 'Bio/Entrez/DTDs/MMDB_Structural_model.mod.dtd'
2025-11-06 20:53:52,758 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Access.dtd'
2025-11-06 20:53:52,758 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Access.mod.dtd'
2025-11-06 20:53:52,758 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Biblio.dtd'
2025-11-06 20:53:52,759 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Biblio.mod.dtd'
2025-11-06 20:53:52,759 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_BioSource.dtd'
2025-11-06 20:53:52,759 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_BioSource.mod.dtd'
2025-11-06 20:53:52,759 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_BioTree.dtd'
2025-11-06 20:53:52,760 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_BioTree.mod.dtd'
2025-11-06 20:53:52,760 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Blast4.dtd'
2025-11-06 20:53:52,760 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Blast4.mod.dtd'
2025-11-06 20:53:52,761 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_BlastDL.dtd'
2025-11-06 20:53:52,761 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_BlastDL.mod.dtd'
2025-11-06 20:53:52,761 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_BlastOutput.dtd'
2025-11-06 20:53:52,762 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_BlastOutput.mod.dtd'
2025-11-06 20:53:52,762 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Cdd.dtd'
2025-11-06 20:53:52,762 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Cdd.mod.dtd'
2025-11-06 20:53:52,763 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Cn3d.dtd'
2025-11-06 20:53:52,763 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Cn3d.mod.dtd'
2025-11-06 20:53:52,763 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Entity.mod.dtd'
2025-11-06 20:53:52,763 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Entrez2.dtd'
2025-11-06 20:53:52,764 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Entrez2.mod.dtd'
2025-11-06 20:53:52,764 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Entrezgene.dtd'
2025-11-06 20:53:52,764 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Entrezgene.mod.dtd'
2025-11-06 20:53:52,765 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_FeatDef.dtd'
2025-11-06 20:53:52,766 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_FeatDef.mod.dtd'
2025-11-06 20:53:52,766 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_GBSeq.dtd'
2025-11-06 20:53:52,766 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_GBSeq.mod.dtd'
2025-11-06 20:53:52,766 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Gene.dtd'
2025-11-06 20:53:52,767 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Gene.mod.dtd'
2025-11-06 20:53:52,767 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_General.dtd'
2025-11-06 20:53:52,767 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_General.mod.dtd'
2025-11-06 20:53:52,767 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_ID1Access.dtd'
2025-11-06 20:53:52,768 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_ID1Access.mod.dtd'
2025-11-06 20:53:52,768 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_ID2Access.dtd'
2025-11-06 20:53:52,768 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_ID2Access.mod.dtd'
2025-11-06 20:53:52,769 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_MedArchive.dtd'
2025-11-06 20:53:52,769 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_MedArchive.mod.dtd'
2025-11-06 20:53:52,769 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Medlars.dtd'
2025-11-06 20:53:52,770 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Medlars.mod.dtd'
2025-11-06 20:53:52,770 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Medline.dtd'
2025-11-06 20:53:52,770 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Medline.mod.dtd'
2025-11-06 20:53:52,770 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Mim.dtd'
2025-11-06 20:53:52,771 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Mim.mod.dtd'
2025-11-06 20:53:52,771 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Mime.dtd'
2025-11-06 20:53:52,771 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Mime.mod.dtd'
2025-11-06 20:53:52,771 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_ObjPrt.dtd'
2025-11-06 20:53:52,772 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_ObjPrt.mod.dtd'
2025-11-06 20:53:52,772 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Organism.dtd'
2025-11-06 20:53:52,772 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Organism.mod.dtd'
2025-11-06 20:53:52,773 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_PCAssay.dtd'
2025-11-06 20:53:52,773 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_PCAssay.mod.dtd'
2025-11-06 20:53:52,773 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_PCSubstance.dtd'
2025-11-06 20:53:52,774 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_PCSubstance.mod.dtd'
2025-11-06 20:53:52,774 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Project.dtd'
2025-11-06 20:53:52,774 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Project.mod.dtd'
2025-11-06 20:53:52,774 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Protein.dtd'
2025-11-06 20:53:52,775 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Protein.mod.dtd'
2025-11-06 20:53:52,775 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Pub.dtd'
2025-11-06 20:53:52,775 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Pub.mod.dtd'
2025-11-06 20:53:52,775 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_PubMed.dtd'
2025-11-06 20:53:52,776 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_PubMed.mod.dtd'
2025-11-06 20:53:52,776 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_RNA.dtd'
2025-11-06 20:53:52,776 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_RNA.mod.dtd'
2025-11-06 20:53:52,776 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Remap.dtd'
2025-11-06 20:53:52,777 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Remap.mod.dtd'
2025-11-06 20:53:52,777 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Rsite.dtd'
2025-11-06 20:53:52,777 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Rsite.mod.dtd'
2025-11-06 20:53:52,777 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_ScoreMat.dtd'
2025-11-06 20:53:52,778 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_ScoreMat.mod.dtd'
2025-11-06 20:53:52,778 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_SeqCode.dtd'
2025-11-06 20:53:52,778 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_SeqCode.mod.dtd'
2025-11-06 20:53:52,779 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_SeqTable.dtd'
2025-11-06 20:53:52,779 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_SeqTable.mod.dtd'
2025-11-06 20:53:52,779 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Seq_split.dtd'
2025-11-06 20:53:52,779 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Seq_split.mod.dtd'
2025-11-06 20:53:52,780 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Seqalign.dtd'
2025-11-06 20:53:52,780 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Seqalign.mod.dtd'
2025-11-06 20:53:52,780 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Seqfeat.dtd'
2025-11-06 20:53:52,781 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Seqfeat.mod.dtd'
2025-11-06 20:53:52,781 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Seqloc.dtd'
2025-11-06 20:53:52,781 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Seqloc.mod.dtd'
2025-11-06 20:53:52,782 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Seqres.dtd'
2025-11-06 20:53:52,782 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Seqres.mod.dtd'
2025-11-06 20:53:52,782 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Seqset.dtd'
2025-11-06 20:53:52,782 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Seqset.mod.dtd'
2025-11-06 20:53:52,783 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Sequence.dtd'
2025-11-06 20:53:52,783 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Sequence.mod.dtd'
2025-11-06 20:53:52,783 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Submit.dtd'
2025-11-06 20:53:52,783 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Submit.mod.dtd'
2025-11-06 20:53:52,784 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Systems.dtd'
2025-11-06 20:53:52,784 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_TSeq.dtd'
2025-11-06 20:53:52,784 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_TSeq.mod.dtd'
2025-11-06 20:53:52,784 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_TxInit.dtd'
2025-11-06 20:53:52,785 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_TxInit.mod.dtd'
2025-11-06 20:53:52,785 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Variation.dtd'
2025-11-06 20:53:52,785 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Variation.mod.dtd'
2025-11-06 20:53:52,786 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_all.dtd'
2025-11-06 20:53:52,786 wheel INFO adding 'Bio/Entrez/DTDs/NSE.dtd'
2025-11-06 20:53:52,786 wheel INFO adding 'Bio/Entrez/DTDs/NSE.mod.dtd'
2025-11-06 20:53:52,787 wheel INFO adding 'Bio/Entrez/DTDs/OMSSA.dtd'
2025-11-06 20:53:52,787 wheel INFO adding 'Bio/Entrez/DTDs/OMSSA.mod.dtd'
2025-11-06 20:53:52,787 wheel INFO adding 'Bio/Entrez/DTDs/PDB_General.dtd'
2025-11-06 20:53:52,788 wheel INFO adding 'Bio/Entrez/DTDs/PDB_General.mod.dtd'
2025-11-06 20:53:52,788 wheel INFO adding 'Bio/Entrez/DTDs/PIR_General.dtd'
2025-11-06 20:53:52,788 wheel INFO adding 'Bio/Entrez/DTDs/PIR_General.mod.dtd'
2025-11-06 20:53:52,788 wheel INFO adding 'Bio/Entrez/DTDs/PRF_General.dtd'
2025-11-06 20:53:52,789 wheel INFO adding 'Bio/Entrez/DTDs/PRF_General.mod.dtd'
2025-11-06 20:53:52,789 wheel INFO adding 'Bio/Entrez/DTDs/SP_General.dtd'
2025-11-06 20:53:52,789 wheel INFO adding 'Bio/Entrez/DTDs/SP_General.mod.dtd'
2025-11-06 20:53:52,789 wheel INFO adding 'Bio/Entrez/DTDs/XHTMLtablesetup.ent'
2025-11-06 20:53:52,790 wheel INFO adding 'Bio/Entrez/DTDs/archivearticle.dtd'
2025-11-06 20:53:52,790 wheel INFO adding 'Bio/Entrez/DTDs/archivecustom-classes.ent'
2025-11-06 20:53:52,791 wheel INFO adding 'Bio/Entrez/DTDs/archivecustom-mixes.ent'
2025-11-06 20:53:52,791 wheel INFO adding 'Bio/Entrez/DTDs/archivecustom-models.ent'
2025-11-06 20:53:52,791 wheel INFO adding 'Bio/Entrez/DTDs/archivecustom-modules.ent'
2025-11-06 20:53:52,792 wheel INFO adding 'Bio/Entrez/DTDs/articlemeta.ent'
2025-11-06 20:53:52,793 wheel INFO adding 'Bio/Entrez/DTDs/backmatter.ent'
2025-11-06 20:53:52,793 wheel INFO adding 'Bio/Entrez/DTDs/bookdoc_100301.dtd'
2025-11-06 20:53:52,793 wheel INFO adding 'Bio/Entrez/DTDs/bookdoc_110101.dtd'
2025-11-06 20:53:52,793 wheel INFO adding 'Bio/Entrez/DTDs/bookdoc_120101.dtd'
2025-11-06 20:53:52,794 wheel INFO adding 'Bio/Entrez/DTDs/bookdoc_130101.dtd'
2025-11-06 20:53:52,794 wheel INFO adding 'Bio/Entrez/DTDs/bookdoc_140101.dtd'
2025-11-06 20:53:52,794 wheel INFO adding 'Bio/Entrez/DTDs/bookdoc_150101.dtd'
2025-11-06 20:53:52,794 wheel INFO adding 'Bio/Entrez/DTDs/chars.ent'
2025-11-06 20:53:52,795 wheel INFO adding 'Bio/Entrez/DTDs/common.ent'
2025-11-06 20:53:52,796 wheel INFO adding 'Bio/Entrez/DTDs/default-classes.ent'
2025-11-06 20:53:52,796 wheel INFO adding 'Bio/Entrez/DTDs/default-mixes.ent'
2025-11-06 20:53:52,797 wheel INFO adding 'Bio/Entrez/DTDs/display.ent'
2025-11-06 20:53:52,797 wheel INFO adding 'Bio/Entrez/DTDs/eInfo_020511.dtd'
2025-11-06 20:53:52,798 wheel INFO adding 'Bio/Entrez/DTDs/eLink_090910.dtd'
2025-11-06 20:53:52,798 wheel INFO adding 'Bio/Entrez/DTDs/eLink_101123.dtd'
2025-11-06 20:53:52,798 wheel INFO adding 'Bio/Entrez/DTDs/ePost_020511.dtd'
2025-11-06 20:53:52,798 wheel INFO adding 'Bio/Entrez/DTDs/eSearch_020511.dtd'
2025-11-06 20:53:52,799 wheel INFO adding 'Bio/Entrez/DTDs/eSpell.dtd'
2025-11-06 20:53:52,799 wheel INFO adding 'Bio/Entrez/DTDs/eSummary_041029.dtd'
2025-11-06 20:53:52,799 wheel INFO adding 'Bio/Entrez/DTDs/egquery.dtd'
2025-11-06 20:53:52,799 wheel INFO adding 'Bio/Entrez/DTDs/einfo.dtd'
2025-11-06 20:53:52,800 wheel INFO adding 'Bio/Entrez/DTDs/elink.dtd'
2025-11-06 20:53:52,800 wheel INFO adding 'Bio/Entrez/DTDs/elink_020122.dtd'
2025-11-06 20:53:52,800 wheel INFO adding 'Bio/Entrez/DTDs/epost.dtd'
2025-11-06 20:53:52,800 wheel INFO adding 'Bio/Entrez/DTDs/esearch.dtd'
2025-11-06 20:53:52,801 wheel INFO adding 'Bio/Entrez/DTDs/esummary-v1.dtd'
2025-11-06 20:53:52,801 wheel INFO adding 'Bio/Entrez/DTDs/esummary_clinvar.dtd'
2025-11-06 20:53:52,801 wheel INFO adding 'Bio/Entrez/DTDs/esummary_gene.dtd'
2025-11-06 20:53:52,802 wheel INFO adding 'Bio/Entrez/DTDs/format.ent'
2025-11-06 20:53:52,802 wheel INFO adding 'Bio/Entrez/DTDs/htmltable.dtd'
2025-11-06 20:53:52,802 wheel INFO adding 'Bio/Entrez/DTDs/isoamsa.ent'
2025-11-06 20:53:52,803 wheel INFO adding 'Bio/Entrez/DTDs/isoamsb.ent'
2025-11-06 20:53:52,803 wheel INFO adding 'Bio/Entrez/DTDs/isoamsc.ent'
2025-11-06 20:53:52,803 wheel INFO adding 'Bio/Entrez/DTDs/isoamsn.ent'
2025-11-06 20:53:52,803 wheel INFO adding 'Bio/Entrez/DTDs/isoamso.ent'
2025-11-06 20:53:52,804 wheel INFO adding 'Bio/Entrez/DTDs/isoamsr.ent'
2025-11-06 20:53:52,804 wheel INFO adding 'Bio/Entrez/DTDs/isobox.ent'
2025-11-06 20:53:52,804 wheel INFO adding 'Bio/Entrez/DTDs/isocyr1.ent'
2025-11-06 20:53:52,805 wheel INFO adding 'Bio/Entrez/DTDs/isocyr2.ent'
2025-11-06 20:53:52,805 wheel INFO adding 'Bio/Entrez/DTDs/isodia.ent'
2025-11-06 20:53:52,805 wheel INFO adding 'Bio/Entrez/DTDs/isogrk1.ent'
2025-11-06 20:53:52,805 wheel INFO adding 'Bio/Entrez/DTDs/isogrk2.ent'
2025-11-06 20:53:52,806 wheel INFO adding 'Bio/Entrez/DTDs/isogrk3.ent'
2025-11-06 20:53:52,806 wheel INFO adding 'Bio/Entrez/DTDs/isogrk4.ent'
2025-11-06 20:53:52,806 wheel INFO adding 'Bio/Entrez/DTDs/isolat1.ent'
2025-11-06 20:53:52,806 wheel INFO adding 'Bio/Entrez/DTDs/isolat2.ent'
2025-11-06 20:53:52,807 wheel INFO adding 'Bio/Entrez/DTDs/isomfrk.ent'
2025-11-06 20:53:52,807 wheel INFO adding 'Bio/Entrez/DTDs/isomopf.ent'
2025-11-06 20:53:52,807 wheel INFO adding 'Bio/Entrez/DTDs/isomscr.ent'
2025-11-06 20:53:52,808 wheel INFO adding 'Bio/Entrez/DTDs/isonum.ent'
2025-11-06 20:53:52,808 wheel INFO adding 'Bio/Entrez/DTDs/isopub.ent'
2025-11-06 20:53:52,808 wheel INFO adding 'Bio/Entrez/DTDs/isotech.ent'
2025-11-06 20:53:52,808 wheel INFO adding 'Bio/Entrez/DTDs/journalmeta.ent'
2025-11-06 20:53:52,809 wheel INFO adding 'Bio/Entrez/DTDs/link.ent'
2025-11-06 20:53:52,809 wheel INFO adding 'Bio/Entrez/DTDs/list.ent'
2025-11-06 20:53:52,810 wheel INFO adding 'Bio/Entrez/DTDs/math.ent'
2025-11-06 20:53:52,810 wheel INFO adding 'Bio/Entrez/DTDs/mathml-in-pubmed.mod'
2025-11-06 20:53:52,810 wheel INFO adding 'Bio/Entrez/DTDs/mathml2-qname-1.mod'
2025-11-06 20:53:52,811 wheel INFO adding 'Bio/Entrez/DTDs/mathml2.dtd'
2025-11-06 20:53:52,811 wheel INFO adding 'Bio/Entrez/DTDs/mathml3-qname1.mod'
2025-11-06 20:53:52,812 wheel INFO adding 'Bio/Entrez/DTDs/mathml3.dtd'
2025-11-06 20:53:52,812 wheel INFO adding 'Bio/Entrez/DTDs/mathmlsetup.ent'
2025-11-06 20:53:52,812 wheel INFO adding 'Bio/Entrez/DTDs/mmlalias.ent'
2025-11-06 20:53:52,813 wheel INFO adding 'Bio/Entrez/DTDs/mmlextra.ent'
2025-11-06 20:53:52,813 wheel INFO adding 'Bio/Entrez/DTDs/modules.ent'
2025-11-06 20:53:52,814 wheel INFO adding 'Bio/Entrez/DTDs/nlm-articleset-2.0.dtd'
2025-11-06 20:53:52,814 wheel INFO adding 'Bio/Entrez/DTDs/nlmcatalogrecordset_170601.dtd'
2025-11-06 20:53:52,814 wheel INFO adding 'Bio/Entrez/DTDs/nlmcommon_011101.dtd'
2025-11-06 20:53:52,815 wheel INFO adding 'Bio/Entrez/DTDs/nlmcommon_080101.dtd'
2025-11-06 20:53:52,815 wheel INFO adding 'Bio/Entrez/DTDs/nlmcommon_090101.dtd'
2025-11-06 20:53:52,815 wheel INFO adding 'Bio/Entrez/DTDs/nlmmedline_011101.dtd'
2025-11-06 20:53:52,815 wheel INFO adding 'Bio/Entrez/DTDs/nlmmedline_080101.dtd'
2025-11-06 20:53:52,816 wheel INFO adding 'Bio/Entrez/DTDs/nlmmedline_090101.dtd'
2025-11-06 20:53:52,816 wheel INFO adding 'Bio/Entrez/DTDs/nlmmedlinecitation_011101.dtd'
2025-11-06 20:53:52,816 wheel INFO adding 'Bio/Entrez/DTDs/nlmmedlinecitation_080101.dtd'
2025-11-06 20:53:52,816 wheel INFO adding 'Bio/Entrez/DTDs/nlmmedlinecitation_090101.dtd'
2025-11-06 20:53:52,817 wheel INFO adding 'Bio/Entrez/DTDs/nlmmedlinecitationset_100101.dtd'
2025-11-06 20:53:52,817 wheel INFO adding 'Bio/Entrez/DTDs/nlmmedlinecitationset_100301.dtd'
2025-11-06 20:53:52,817 wheel INFO adding 'Bio/Entrez/DTDs/nlmmedlinecitationset_110101.dtd'
2025-11-06 20:53:52,818 wheel INFO adding 'Bio/Entrez/DTDs/nlmmedlinecitationset_120101.dtd'
2025-11-06 20:53:52,818 wheel INFO adding 'Bio/Entrez/DTDs/nlmmedlinecitationset_130101.dtd'
2025-11-06 20:53:52,818 wheel INFO adding 'Bio/Entrez/DTDs/nlmmedlinecitationset_130501.dtd'
2025-11-06 20:53:52,819 wheel INFO adding 'Bio/Entrez/DTDs/nlmmedlinecitationset_140101.dtd'
2025-11-06 20:53:52,819 wheel INFO adding 'Bio/Entrez/DTDs/nlmmedlinecitationset_150101.dtd'
2025-11-06 20:53:52,819 wheel INFO adding 'Bio/Entrez/DTDs/nlmserials_080101.dtd'
2025-11-06 20:53:52,819 wheel INFO adding 'Bio/Entrez/DTDs/nlmserials_100101.dtd'
2025-11-06 20:53:52,820 wheel INFO adding 'Bio/Entrez/DTDs/nlmsharedcatcit_080101.dtd'
2025-11-06 20:53:52,820 wheel INFO adding 'Bio/Entrez/DTDs/nlmsharedcatcit_090101.dtd'
2025-11-06 20:53:52,820 wheel INFO adding 'Bio/Entrez/DTDs/notat.ent'
2025-11-06 20:53:52,821 wheel INFO adding 'Bio/Entrez/DTDs/para.ent'
2025-11-06 20:53:52,821 wheel INFO adding 'Bio/Entrez/DTDs/phrase.ent'
2025-11-06 20:53:52,821 wheel INFO adding 'Bio/Entrez/DTDs/pmc-1.dtd'
2025-11-06 20:53:52,822 wheel INFO adding 'Bio/Entrez/DTDs/pubmed_020114.dtd'
2025-11-06 20:53:52,822 wheel INFO adding 'Bio/Entrez/DTDs/pubmed_080101.dtd'
2025-11-06 20:53:52,822 wheel INFO adding 'Bio/Entrez/DTDs/pubmed_090101.dtd'
2025-11-06 20:53:52,822 wheel INFO adding 'Bio/Entrez/DTDs/pubmed_100101.dtd'
2025-11-06 20:53:52,823 wheel INFO adding 'Bio/Entrez/DTDs/pubmed_100301.dtd'
2025-11-06 20:53:52,823 wheel INFO adding 'Bio/Entrez/DTDs/pubmed_110101.dtd'
2025-11-06 20:53:52,823 wheel INFO adding 'Bio/Entrez/DTDs/pubmed_120101.dtd'
2025-11-06 20:53:52,824 wheel INFO adding 'Bio/Entrez/DTDs/pubmed_130101.dtd'
2025-11-06 20:53:52,824 wheel INFO adding 'Bio/Entrez/DTDs/pubmed_130501.dtd'
2025-11-06 20:53:52,824 wheel INFO adding 'Bio/Entrez/DTDs/pubmed_140101.dtd'
2025-11-06 20:53:52,824 wheel INFO adding 'Bio/Entrez/DTDs/pubmed_150101.dtd'
2025-11-06 20:53:52,825 wheel INFO adding 'Bio/Entrez/DTDs/pubmed_180101.dtd'
2025-11-06 20:53:52,825 wheel INFO adding 'Bio/Entrez/DTDs/pubmed_180601.dtd'
2025-11-06 20:53:52,825 wheel INFO adding 'Bio/Entrez/DTDs/pubmed_190101.dtd'
2025-11-06 20:53:52,826 wheel INFO adding 'Bio/Entrez/DTDs/references.ent'
2025-11-06 20:53:52,826 wheel INFO adding 'Bio/Entrez/DTDs/section.ent'
2025-11-06 20:53:52,826 wheel INFO adding 'Bio/Entrez/DTDs/taxon.dtd'
2025-11-06 20:53:52,827 wheel INFO adding 'Bio/Entrez/DTDs/xhtml-inlstyle-1.mod'
2025-11-06 20:53:52,827 wheel INFO adding 'Bio/Entrez/DTDs/xhtml-table-1.mod'
2025-11-06 20:53:52,827 wheel INFO adding 'Bio/Entrez/DTDs/xmlspecchars.ent'
2025-11-06 20:53:52,828 wheel INFO adding 'Bio/Entrez/XSDs/IPGReportSet.xsd'
2025-11-06 20:53:52,828 wheel INFO adding 'Bio/Entrez/XSDs/NCBI_BlastOutput2.mod.xsd'
2025-11-06 20:53:52,828 wheel INFO adding 'Bio/Entrez/XSDs/NCBI_BlastOutput2.xsd'
2025-11-06 20:53:52,829 wheel INFO adding 'Bio/ExPASy/Enzyme.py'
2025-11-06 20:53:52,829 wheel INFO adding 'Bio/ExPASy/Prodoc.py'
2025-11-06 20:53:52,829 wheel INFO adding 'Bio/ExPASy/Prosite.py'
2025-11-06 20:53:52,829 wheel INFO adding 'Bio/ExPASy/ScanProsite.py'
2025-11-06 20:53:52,830 wheel INFO adding 'Bio/ExPASy/__init__.py'
2025-11-06 20:53:52,830 wheel INFO adding 'Bio/ExPASy/cellosaurus.py'
2025-11-06 20:53:52,830 wheel INFO adding 'Bio/GenBank/Record.py'
2025-11-06 20:53:52,831 wheel INFO adding 'Bio/GenBank/Scanner.py'
2025-11-06 20:53:52,832 wheel INFO adding 'Bio/GenBank/__init__.py'
2025-11-06 20:53:52,832 wheel INFO adding 'Bio/GenBank/utils.py'
2025-11-06 20:53:52,832 wheel INFO adding 'Bio/Geo/Record.py'
2025-11-06 20:53:52,833 wheel INFO adding 'Bio/Geo/__init__.py'
2025-11-06 20:53:52,833 wheel INFO adding 'Bio/Graphics/BasicChromosome.py'
2025-11-06 20:53:52,833 wheel INFO adding 'Bio/Graphics/ColorSpiral.py'
2025-11-06 20:53:52,834 wheel INFO adding 'Bio/Graphics/Comparative.py'
2025-11-06 20:53:52,834 wheel INFO adding 'Bio/Graphics/DisplayRepresentation.py'
2025-11-06 20:53:52,834 wheel INFO adding 'Bio/Graphics/Distribution.py'
2025-11-06 20:53:52,834 wheel INFO adding 'Bio/Graphics/KGML_vis.py'
2025-11-06 20:53:52,835 wheel INFO adding 'Bio/Graphics/__init__.py'
2025-11-06 20:53:52,835 wheel INFO adding 'Bio/Graphics/GenomeDiagram/_AbstractDrawer.py'
2025-11-06 20:53:52,836 wheel INFO adding 'Bio/Graphics/GenomeDiagram/_CircularDrawer.py'
2025-11-06 20:53:52,836 wheel INFO adding 'Bio/Graphics/GenomeDiagram/_Colors.py'
2025-11-06 20:53:52,836 wheel INFO adding 'Bio/Graphics/GenomeDiagram/_CrossLink.py'
2025-11-06 20:53:52,837 wheel INFO adding 'Bio/Graphics/GenomeDiagram/_Diagram.py'
2025-11-06 20:53:52,837 wheel INFO adding 'Bio/Graphics/GenomeDiagram/_Feature.py'
2025-11-06 20:53:52,837 wheel INFO adding 'Bio/Graphics/GenomeDiagram/_FeatureSet.py'
2025-11-06 20:53:52,838 wheel INFO adding 'Bio/Graphics/GenomeDiagram/_Graph.py'
2025-11-06 20:53:52,838 wheel INFO adding 'Bio/Graphics/GenomeDiagram/_GraphSet.py'
2025-11-06 20:53:52,838 wheel INFO adding 'Bio/Graphics/GenomeDiagram/_LinearDrawer.py'
2025-11-06 20:53:52,839 wheel INFO adding 'Bio/Graphics/GenomeDiagram/_Track.py'
2025-11-06 20:53:52,839 wheel INFO adding 'Bio/Graphics/GenomeDiagram/__init__.py'
2025-11-06 20:53:52,839 wheel INFO adding 'Bio/HMM/DynamicProgramming.py'
2025-11-06 20:53:52,840 wheel INFO adding 'Bio/HMM/MarkovModel.py'
2025-11-06 20:53:52,840 wheel INFO adding 'Bio/HMM/Trainer.py'
2025-11-06 20:53:52,840 wheel INFO adding 'Bio/HMM/Utilities.py'
2025-11-06 20:53:52,841 wheel INFO adding 'Bio/HMM/__init__.py'
2025-11-06 20:53:52,841 wheel INFO adding 'Bio/KEGG/REST.py'
2025-11-06 20:53:52,841 wheel INFO adding 'Bio/KEGG/__init__.py'
2025-11-06 20:53:52,842 wheel INFO adding 'Bio/KEGG/Compound/__init__.py'
2025-11-06 20:53:52,842 wheel INFO adding 'Bio/KEGG/Enzyme/__init__.py'
2025-11-06 20:53:52,842 wheel INFO adding 'Bio/KEGG/Gene/__init__.py'
2025-11-06 20:53:52,843 wheel INFO adding 'Bio/KEGG/KGML/KGML_parser.py'
2025-11-06 20:53:52,843 wheel INFO adding 'Bio/KEGG/KGML/KGML_pathway.py'
2025-11-06 20:53:52,843 wheel INFO adding 'Bio/KEGG/KGML/__init__.py'
2025-11-06 20:53:52,844 wheel INFO adding 'Bio/KEGG/Map/__init__.py'
2025-11-06 20:53:52,844 wheel INFO adding 'Bio/Medline/__init__.py'
2025-11-06 20:53:52,844 wheel INFO adding 'Bio/NMR/NOEtools.py'
2025-11-06 20:53:52,845 wheel INFO adding 'Bio/NMR/__init__.py'
2025-11-06 20:53:52,845 wheel INFO adding 'Bio/NMR/xpktools.py'
2025-11-06 20:53:52,845 wheel INFO adding 'Bio/Nexus/Nexus.py'
2025-11-06 20:53:52,846 wheel INFO adding 'Bio/Nexus/Nodes.py'
2025-11-06 20:53:52,846 wheel INFO adding 'Bio/Nexus/StandardData.py'
2025-11-06 20:53:52,847 wheel INFO adding 'Bio/Nexus/Trees.py'
2025-11-06 20:53:52,847 wheel INFO adding 'Bio/Nexus/__init__.py'
2025-11-06 20:53:52,847 wheel INFO adding 'Bio/Nexus/cnexus.c'
2025-11-06 20:53:52,847 wheel INFO adding 'Bio/Nexus/cnexus.cpython-312-i386-linux-musl.so'
2025-11-06 20:53:52,848 wheel INFO adding 'Bio/PDB/AbstractPropertyMap.py'
2025-11-06 20:53:52,848 wheel INFO adding 'Bio/PDB/Atom.py'
2025-11-06 20:53:52,849 wheel INFO adding 'Bio/PDB/Chain.py'
2025-11-06 20:53:52,849 wheel INFO adding 'Bio/PDB/DSSP.py'
2025-11-06 20:53:52,849 wheel INFO adding 'Bio/PDB/Dice.py'
2025-11-06 20:53:52,849 wheel INFO adding 'Bio/PDB/Entity.py'
2025-11-06 20:53:52,850 wheel INFO adding 'Bio/PDB/FragmentMapper.py'
2025-11-06 20:53:52,850 wheel INFO adding 'Bio/PDB/HSExposure.py'
2025-11-06 20:53:52,850 wheel INFO adding 'Bio/PDB/MMCIF2Dict.py'
2025-11-06 20:53:52,851 wheel INFO adding 'Bio/PDB/MMCIFParser.py'
2025-11-06 20:53:52,851 wheel INFO adding 'Bio/PDB/Model.py'
2025-11-06 20:53:52,851 wheel INFO adding 'Bio/PDB/NACCESS.py'
2025-11-06 20:53:52,852 wheel INFO adding 'Bio/PDB/NeighborSearch.py'
2025-11-06 20:53:52,852 wheel INFO adding 'Bio/PDB/PDBExceptions.py'
2025-11-06 20:53:52,852 wheel INFO adding 'Bio/PDB/PDBIO.py'
2025-11-06 20:53:52,853 wheel INFO adding 'Bio/PDB/PDBList.py'
2025-11-06 20:53:52,853 wheel INFO adding 'Bio/PDB/PDBMLParser.py'
2025-11-06 20:53:52,853 wheel INFO adding 'Bio/PDB/PDBParser.py'
2025-11-06 20:53:52,854 wheel INFO adding 'Bio/PDB/PICIO.py'
2025-11-06 20:53:52,854 wheel INFO adding 'Bio/PDB/PSEA.py'
2025-11-06 20:53:52,854 wheel INFO adding 'Bio/PDB/Polypeptide.py'
2025-11-06 20:53:52,855 wheel INFO adding 'Bio/PDB/Residue.py'
2025-11-06 20:53:52,855 wheel INFO adding 'Bio/PDB/ResidueDepth.py'
2025-11-06 20:53:52,855 wheel INFO adding 'Bio/PDB/SASA.py'
2025-11-06 20:53:52,856 wheel INFO adding 'Bio/PDB/SCADIO.py'
2025-11-06 20:53:52,856 wheel INFO adding 'Bio/PDB/Selection.py'
2025-11-06 20:53:52,856 wheel INFO adding 'Bio/PDB/Structure.py'
2025-11-06 20:53:52,857 wheel INFO adding 'Bio/PDB/StructureAlignment.py'
2025-11-06 20:53:52,857 wheel INFO adding 'Bio/PDB/StructureBuilder.py'
2025-11-06 20:53:52,857 wheel INFO adding 'Bio/PDB/Superimposer.py'
2025-11-06 20:53:52,857 wheel INFO adding 'Bio/PDB/__init__.py'
2025-11-06 20:53:52,858 wheel INFO adding 'Bio/PDB/_bcif_helper.cpython-312-i386-linux-musl.so'
2025-11-06 20:53:52,858 wheel INFO adding 'Bio/PDB/alphafold_db.py'
2025-11-06 20:53:52,858 wheel INFO adding 'Bio/PDB/bcifhelpermodule.c'
2025-11-06 20:53:52,859 wheel INFO adding 'Bio/PDB/binary_cif.py'
2025-11-06 20:53:52,859 wheel INFO adding 'Bio/PDB/ccealign.cpython-312-i386-linux-musl.so'
2025-11-06 20:53:52,859 wheel INFO adding 'Bio/PDB/ccealignmodule.c'
2025-11-06 20:53:52,860 wheel INFO adding 'Bio/PDB/cealign.py'
2025-11-06 20:53:52,860 wheel INFO adding 'Bio/PDB/ic_data.py'
2025-11-06 20:53:52,861 wheel INFO adding 'Bio/PDB/ic_rebuild.py'
2025-11-06 20:53:52,861 wheel INFO adding 'Bio/PDB/internal_coords.py'
2025-11-06 20:53:52,862 wheel INFO adding 'Bio/PDB/kdtrees.c'
2025-11-06 20:53:52,863 wheel INFO adding 'Bio/PDB/kdtrees.cpython-312-i386-linux-musl.so'
2025-11-06 20:53:52,863 wheel INFO adding 'Bio/PDB/mmcifio.py'
2025-11-06 20:53:52,864 wheel INFO adding 'Bio/PDB/parse_pdb_header.py'
2025-11-06 20:53:52,864 wheel INFO adding 'Bio/PDB/qcprot.py'
2025-11-06 20:53:52,864 wheel INFO adding 'Bio/PDB/vectors.py'
2025-11-06 20:53:52,865 wheel INFO adding 'Bio/PDB/mmtf/DefaultParser.py'
2025-11-06 20:53:52,865 wheel INFO adding 'Bio/PDB/mmtf/__init__.py'
2025-11-06 20:53:52,865 wheel INFO adding 'Bio/PDB/mmtf/mmtfio.py'
2025-11-06 20:53:52,866 wheel INFO adding 'Bio/Pathway/__init__.py'
2025-11-06 20:53:52,866 wheel INFO adding 'Bio/Pathway/Rep/Graph.py'
2025-11-06 20:53:52,866 wheel INFO adding 'Bio/Pathway/Rep/MultiGraph.py'
2025-11-06 20:53:52,867 wheel INFO adding 'Bio/Pathway/Rep/__init__.py'
2025-11-06 20:53:52,867 wheel INFO adding 'Bio/Phylo/BaseTree.py'
2025-11-06 20:53:52,867 wheel INFO adding 'Bio/Phylo/CDAO.py'
2025-11-06 20:53:52,868 wheel INFO adding 'Bio/Phylo/CDAOIO.py'
2025-11-06 20:53:52,868 wheel INFO adding 'Bio/Phylo/Consensus.py'
2025-11-06 20:53:52,868 wheel INFO adding 'Bio/Phylo/NeXML.py'
2025-11-06 20:53:52,869 wheel INFO adding 'Bio/Phylo/NeXMLIO.py'
2025-11-06 20:53:52,869 wheel INFO adding 'Bio/Phylo/Newick.py'
2025-11-06 20:53:52,869 wheel INFO adding 'Bio/Phylo/NewickIO.py'
2025-11-06 20:53:52,870 wheel INFO adding 'Bio/Phylo/NexusIO.py'
2025-11-06 20:53:52,870 wheel INFO adding 'Bio/Phylo/PhyloXML.py'
2025-11-06 20:53:52,870 wheel INFO adding 'Bio/Phylo/PhyloXMLIO.py'
2025-11-06 20:53:52,871 wheel INFO adding 'Bio/Phylo/TreeConstruction.py'
2025-11-06 20:53:52,871 wheel INFO adding 'Bio/Phylo/__init__.py'
2025-11-06 20:53:52,872 wheel INFO adding 'Bio/Phylo/_cdao_owl.py'
2025-11-06 20:53:52,872 wheel INFO adding 'Bio/Phylo/_io.py'
2025-11-06 20:53:52,873 wheel INFO adding 'Bio/Phylo/_utils.py'
2025-11-06 20:53:52,873 wheel INFO adding 'Bio/Phylo/Applications/_Fasttree.py'
2025-11-06 20:53:52,874 wheel INFO adding 'Bio/Phylo/Applications/_Phyml.py'
2025-11-06 20:53:52,874 wheel INFO adding 'Bio/Phylo/Applications/_Raxml.py'
2025-11-06 20:53:52,874 wheel INFO adding 'Bio/Phylo/Applications/__init__.py'
2025-11-06 20:53:52,875 wheel INFO adding 'Bio/Phylo/PAML/__init__.py'
2025-11-06 20:53:52,875 wheel INFO adding 'Bio/Phylo/PAML/_paml.py'
2025-11-06 20:53:52,875 wheel INFO adding 'Bio/Phylo/PAML/_parse_baseml.py'
2025-11-06 20:53:52,875 wheel INFO adding 'Bio/Phylo/PAML/_parse_codeml.py'
2025-11-06 20:53:52,876 wheel INFO adding 'Bio/Phylo/PAML/_parse_yn00.py'
2025-11-06 20:53:52,876 wheel INFO adding 'Bio/Phylo/PAML/baseml.py'
2025-11-06 20:53:52,876 wheel INFO adding 'Bio/Phylo/PAML/chi2.py'
2025-11-06 20:53:52,877 wheel INFO adding 'Bio/Phylo/PAML/codeml.py'
2025-11-06 20:53:52,877 wheel INFO adding 'Bio/Phylo/PAML/yn00.py'
2025-11-06 20:53:52,877 wheel INFO adding 'Bio/PopGen/__init__.py'
2025-11-06 20:53:52,878 wheel INFO adding 'Bio/PopGen/GenePop/Controller.py'
2025-11-06 20:53:52,878 wheel INFO adding 'Bio/PopGen/GenePop/EasyController.py'
2025-11-06 20:53:52,879 wheel INFO adding 'Bio/PopGen/GenePop/FileParser.py'
2025-11-06 20:53:52,879 wheel INFO adding 'Bio/PopGen/GenePop/LargeFileParser.py'
2025-11-06 20:53:52,879 wheel INFO adding 'Bio/PopGen/GenePop/__init__.py'
2025-11-06 20:53:52,880 wheel INFO adding 'Bio/Restriction/PrintFormat.py'
2025-11-06 20:53:52,880 wheel INFO adding 'Bio/Restriction/Restriction.py'
2025-11-06 20:53:52,882 wheel INFO adding 'Bio/Restriction/Restriction_Dictionary.py'
2025-11-06 20:53:52,884 wheel INFO adding 'Bio/Restriction/__init__.py'
2025-11-06 20:53:52,885 wheel INFO adding 'Bio/SCOP/Cla.py'
2025-11-06 20:53:52,885 wheel INFO adding 'Bio/SCOP/Des.py'
2025-11-06 20:53:52,885 wheel INFO adding 'Bio/SCOP/Dom.py'
2025-11-06 20:53:52,885 wheel INFO adding 'Bio/SCOP/Hie.py'
2025-11-06 20:53:52,886 wheel INFO adding 'Bio/SCOP/Raf.py'
2025-11-06 20:53:52,886 wheel INFO adding 'Bio/SCOP/Residues.py'
2025-11-06 20:53:52,886 wheel INFO adding 'Bio/SCOP/__init__.py'
2025-11-06 20:53:52,887 wheel INFO adding 'Bio/SVDSuperimposer/__init__.py'
2025-11-06 20:53:52,887 wheel INFO adding 'Bio/SearchIO/BlatIO.py'
2025-11-06 20:53:52,888 wheel INFO adding 'Bio/SearchIO/FastaIO.py'
2025-11-06 20:53:52,888 wheel INFO adding 'Bio/SearchIO/__init__.py'
2025-11-06 20:53:52,888 wheel INFO adding 'Bio/SearchIO/_index.py'
2025-11-06 20:53:52,889 wheel INFO adding 'Bio/SearchIO/_utils.py'
2025-11-06 20:53:52,889 wheel INFO adding 'Bio/SearchIO/BlastIO/__init__.py'
2025-11-06 20:53:52,889 wheel INFO adding 'Bio/SearchIO/BlastIO/blast_tab.py'
2025-11-06 20:53:52,890 wheel INFO adding 'Bio/SearchIO/BlastIO/blast_xml.py'
2025-11-06 20:53:52,890 wheel INFO adding 'Bio/SearchIO/ExonerateIO/__init__.py'
2025-11-06 20:53:52,891 wheel INFO adding 'Bio/SearchIO/ExonerateIO/_base.py'
2025-11-06 20:53:52,891 wheel INFO adding 'Bio/SearchIO/ExonerateIO/exonerate_cigar.py'
2025-11-06 20:53:52,891 wheel INFO adding 'Bio/SearchIO/ExonerateIO/exonerate_text.py'
2025-11-06 20:53:52,892 wheel INFO adding 'Bio/SearchIO/ExonerateIO/exonerate_vulgar.py'
2025-11-06 20:53:52,892 wheel INFO adding 'Bio/SearchIO/HHsuiteIO/__init__.py'
2025-11-06 20:53:52,892 wheel INFO adding 'Bio/SearchIO/HHsuiteIO/hhsuite2_text.py'
2025-11-06 20:53:52,893 wheel INFO adding 'Bio/SearchIO/HmmerIO/__init__.py'
2025-11-06 20:53:52,893 wheel INFO adding 'Bio/SearchIO/HmmerIO/_base.py'
2025-11-06 20:53:52,893 wheel INFO adding 'Bio/SearchIO/HmmerIO/hmmer2_text.py'
2025-11-06 20:53:52,894 wheel INFO adding 'Bio/SearchIO/HmmerIO/hmmer3_domtab.py'
2025-11-06 20:53:52,894 wheel INFO adding 'Bio/SearchIO/HmmerIO/hmmer3_tab.py'
2025-11-06 20:53:52,894 wheel INFO adding 'Bio/SearchIO/HmmerIO/hmmer3_text.py'
2025-11-06 20:53:52,895 wheel INFO adding 'Bio/SearchIO/InterproscanIO/__init__.py'
2025-11-06 20:53:52,895 wheel INFO adding 'Bio/SearchIO/InterproscanIO/interproscan_xml.py'
2025-11-06 20:53:52,895 wheel INFO adding 'Bio/SearchIO/_model/__init__.py'
2025-11-06 20:53:52,896 wheel INFO adding 'Bio/SearchIO/_model/_base.py'
2025-11-06 20:53:52,896 wheel INFO adding 'Bio/SearchIO/_model/hit.py'
2025-11-06 20:53:52,896 wheel INFO adding 'Bio/SearchIO/_model/hsp.py'
2025-11-06 20:53:52,897 wheel INFO adding 'Bio/SearchIO/_model/query.py'
2025-11-06 20:53:52,897 wheel INFO adding 'Bio/SeqIO/AbiIO.py'
2025-11-06 20:53:52,898 wheel INFO adding 'Bio/SeqIO/AceIO.py'
2025-11-06 20:53:52,898 wheel INFO adding 'Bio/SeqIO/FastaIO.py'
2025-11-06 20:53:52,898 wheel INFO adding 'Bio/SeqIO/GckIO.py'
2025-11-06 20:53:52,899 wheel INFO adding 'Bio/SeqIO/GfaIO.py'
2025-11-06 20:53:52,899 wheel INFO adding 'Bio/SeqIO/IgIO.py'
2025-11-06 20:53:52,899 wheel INFO adding 'Bio/SeqIO/InsdcIO.py'
2025-11-06 20:53:52,900 wheel INFO adding 'Bio/SeqIO/Interfaces.py'
2025-11-06 20:53:52,900 wheel INFO adding 'Bio/SeqIO/NibIO.py'
2025-11-06 20:53:52,900 wheel INFO adding 'Bio/SeqIO/PdbIO.py'
2025-11-06 20:53:52,901 wheel INFO adding 'Bio/SeqIO/PhdIO.py'
2025-11-06 20:53:52,901 wheel INFO adding 'Bio/SeqIO/PirIO.py'
2025-11-06 20:53:52,902 wheel INFO adding 'Bio/SeqIO/QualityIO.py'
2025-11-06 20:53:52,902 wheel INFO adding 'Bio/SeqIO/SeqXmlIO.py'
2025-11-06 20:53:52,903 wheel INFO adding 'Bio/SeqIO/SffIO.py'
2025-11-06 20:53:52,903 wheel INFO adding 'Bio/SeqIO/SnapGeneIO.py'
2025-11-06 20:53:52,903 wheel INFO adding 'Bio/SeqIO/SwissIO.py'
2025-11-06 20:53:52,904 wheel INFO adding 'Bio/SeqIO/TabIO.py'
2025-11-06 20:53:52,904 wheel INFO adding 'Bio/SeqIO/TwoBitIO.py'
2025-11-06 20:53:52,904 wheel INFO adding 'Bio/SeqIO/UniprotIO.py'
2025-11-06 20:53:52,905 wheel INFO adding 'Bio/SeqIO/XdnaIO.py'
2025-11-06 20:53:52,905 wheel INFO adding 'Bio/SeqIO/__init__.py'
2025-11-06 20:53:52,906 wheel INFO adding 'Bio/SeqIO/_index.py'
2025-11-06 20:53:52,906 wheel INFO adding 'Bio/SeqIO/_twoBitIO.c'
2025-11-06 20:53:52,906 wheel INFO adding 'Bio/SeqIO/_twoBitIO.cpython-312-i386-linux-musl.so'
2025-11-06 20:53:52,907 wheel INFO adding 'Bio/SeqUtils/CheckSum.py'
2025-11-06 20:53:52,907 wheel INFO adding 'Bio/SeqUtils/IsoelectricPoint.py'
2025-11-06 20:53:52,908 wheel INFO adding 'Bio/SeqUtils/MeltingTemp.py'
2025-11-06 20:53:52,908 wheel INFO adding 'Bio/SeqUtils/ProtParam.py'
2025-11-06 20:53:52,908 wheel INFO adding 'Bio/SeqUtils/ProtParamData.py'
2025-11-06 20:53:52,909 wheel INFO adding 'Bio/SeqUtils/__init__.py'
2025-11-06 20:53:52,909 wheel INFO adding 'Bio/SeqUtils/lcc.py'
2025-11-06 20:53:52,909 wheel INFO adding 'Bio/Sequencing/Ace.py'
2025-11-06 20:53:52,910 wheel INFO adding 'Bio/Sequencing/Phd.py'
2025-11-06 20:53:52,910 wheel INFO adding 'Bio/Sequencing/__init__.py'
2025-11-06 20:53:52,910 wheel INFO adding 'Bio/Sequencing/Applications/_Novoalign.py'
2025-11-06 20:53:52,911 wheel INFO adding 'Bio/Sequencing/Applications/__init__.py'
2025-11-06 20:53:52,911 wheel INFO adding 'Bio/Sequencing/Applications/_bwa.py'
2025-11-06 20:53:52,911 wheel INFO adding 'Bio/Sequencing/Applications/_samtools.py'
2025-11-06 20:53:52,912 wheel INFO adding 'Bio/SwissProt/KeyWList.py'
2025-11-06 20:53:52,912 wheel INFO adding 'Bio/SwissProt/__init__.py'
2025-11-06 20:53:52,913 wheel INFO adding 'Bio/TogoWS/__init__.py'
2025-11-06 20:53:52,913 wheel INFO adding 'Bio/UniGene/__init__.py'
2025-11-06 20:53:52,913 wheel INFO adding 'Bio/UniProt/GOA.py'
2025-11-06 20:53:52,914 wheel INFO adding 'Bio/UniProt/__init__.py'
2025-11-06 20:53:52,914 wheel INFO adding 'Bio/codonalign/__init__.py'
2025-11-06 20:53:52,915 wheel INFO adding 'Bio/codonalign/codonalignment.py'
2025-11-06 20:53:52,915 wheel INFO adding 'Bio/codonalign/codonseq.py'
2025-11-06 20:53:52,916 wheel INFO adding 'Bio/motifs/__init__.py'
2025-11-06 20:53:52,916 wheel INFO adding 'Bio/motifs/_pwm.c'
2025-11-06 20:53:52,916 wheel INFO adding 'Bio/motifs/_pwm.cpython-312-i386-linux-musl.so'
2025-11-06 20:53:52,917 wheel INFO adding 'Bio/motifs/alignace.py'
2025-11-06 20:53:52,917 wheel INFO adding 'Bio/motifs/clusterbuster.py'
2025-11-06 20:53:52,917 wheel INFO adding 'Bio/motifs/mast.py'
2025-11-06 20:53:52,917 wheel INFO adding 'Bio/motifs/matrix.py'
2025-11-06 20:53:52,918 wheel INFO adding 'Bio/motifs/meme.py'
2025-11-06 20:53:52,918 wheel INFO adding 'Bio/motifs/minimal.py'
2025-11-06 20:53:52,918 wheel INFO adding 'Bio/motifs/pfm.py'
2025-11-06 20:53:52,919 wheel INFO adding 'Bio/motifs/thresholds.py'
2025-11-06 20:53:52,919 wheel INFO adding 'Bio/motifs/transfac.py'
2025-11-06 20:53:52,919 wheel INFO adding 'Bio/motifs/xms.py'
2025-11-06 20:53:52,920 wheel INFO adding 'Bio/motifs/applications/__init__.py'
2025-11-06 20:53:52,920 wheel INFO adding 'Bio/motifs/applications/_xxmotif.py'
2025-11-06 20:53:52,920 wheel INFO adding 'Bio/motifs/jaspar/__init__.py'
2025-11-06 20:53:52,920 wheel INFO adding 'Bio/motifs/jaspar/db.py'
2025-11-06 20:53:52,921 wheel INFO adding 'Bio/phenotype/__init__.py'
2025-11-06 20:53:52,921 wheel INFO adding 'Bio/phenotype/phen_micro.py'
2025-11-06 20:53:52,922 wheel INFO adding 'Bio/phenotype/pm_fitting.py'
2025-11-06 20:53:52,922 wheel INFO adding 'BioSQL/BioSeq.py'
2025-11-06 20:53:52,922 wheel INFO adding 'BioSQL/BioSeqDatabase.py'
2025-11-06 20:53:52,923 wheel INFO adding 'BioSQL/DBUtils.py'
2025-11-06 20:53:52,923 wheel INFO adding 'BioSQL/Loader.py'
2025-11-06 20:53:52,924 wheel INFO adding 'BioSQL/__init__.py'
2025-11-06 20:53:52,924 wheel INFO adding 'BioSQL/py.typed'
2025-11-06 20:53:52,924 wheel INFO adding 'biopython-1.85.dist-info/licenses/LICENSE'
2025-11-06 20:53:52,925 wheel INFO adding 'biopython-1.85.dist-info/licenses/LICENSE.rst'
2025-11-06 20:53:52,925 wheel INFO adding 'biopython-1.85.dist-info/METADATA'
2025-11-06 20:53:52,925 wheel INFO adding 'biopython-1.85.dist-info/WHEEL'
2025-11-06 20:53:52,925 wheel INFO adding 'biopython-1.85.dist-info/top_level.txt'
2025-11-06 20:53:52,928 wheel INFO adding 'biopython-1.85.dist-info/RECORD'
2025-11-06 20:53:52,931 root INFO removing build/bdist.linux-i686/wheel
2025-11-06 20:53:52,949 gpep517 INFO The backend produced .dist/biopython-1.85-cp312-cp312-linux_i686.whl
biopython-1.85-cp312-cp312-linux_i686.whl
>>> py3-biopython: Entering fakeroot...
>>> py3-biopython-pyc*: Running split function pyc...
'usr/lib/python3.12/site-packages/Bio/Geo/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Geo/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Align/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Align/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Align/Applications/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Align/Applications/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Align/substitution_matrices/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Align/substitution_matrices/__pycache__'
'usr/lib/python3.12/site-packages/Bio/codonalign/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/codonalign/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Phylo/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Phylo/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Phylo/Applications/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Phylo/Applications/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Phylo/PAML/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Phylo/PAML/__pycache__'
'usr/lib/python3.12/site-packages/Bio/ExPASy/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/ExPASy/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Medline/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Medline/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Application/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Application/__pycache__'
'usr/lib/python3.12/site-packages/Bio/SwissProt/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/SwissProt/__pycache__'
'usr/lib/python3.12/site-packages/Bio/PopGen/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/PopGen/__pycache__'
'usr/lib/python3.12/site-packages/Bio/PopGen/GenePop/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/PopGen/GenePop/__pycache__'
'usr/lib/python3.12/site-packages/Bio/HMM/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/HMM/__pycache__'
'usr/lib/python3.12/site-packages/Bio/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Restriction/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Restriction/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Entrez/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Entrez/__pycache__'
'usr/lib/python3.12/site-packages/Bio/TogoWS/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/TogoWS/__pycache__'
'usr/lib/python3.12/site-packages/Bio/UniGene/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/UniGene/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Sequencing/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Sequencing/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Sequencing/Applications/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Sequencing/Applications/__pycache__'
'usr/lib/python3.12/site-packages/Bio/SeqIO/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/SeqIO/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Cluster/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Cluster/__pycache__'
'usr/lib/python3.12/site-packages/Bio/UniProt/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/UniProt/__pycache__'
'usr/lib/python3.12/site-packages/Bio/KEGG/Enzyme/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/KEGG/Enzyme/__pycache__'
'usr/lib/python3.12/site-packages/Bio/KEGG/Gene/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/KEGG/Gene/__pycache__'
'usr/lib/python3.12/site-packages/Bio/KEGG/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/KEGG/__pycache__'
'usr/lib/python3.12/site-packages/Bio/KEGG/KGML/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/KEGG/KGML/__pycache__'
'usr/lib/python3.12/site-packages/Bio/KEGG/Map/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/KEGG/Map/__pycache__'
'usr/lib/python3.12/site-packages/Bio/KEGG/Compound/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/KEGG/Compound/__pycache__'
'usr/lib/python3.12/site-packages/Bio/phenotype/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/phenotype/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Graphics/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Graphics/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Graphics/GenomeDiagram/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Graphics/GenomeDiagram/__pycache__'
'usr/lib/python3.12/site-packages/Bio/CAPS/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/CAPS/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Alphabet/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Alphabet/__pycache__'
'usr/lib/python3.12/site-packages/Bio/GenBank/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/GenBank/__pycache__'
'usr/lib/python3.12/site-packages/Bio/PDB/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/PDB/__pycache__'
'usr/lib/python3.12/site-packages/Bio/PDB/mmtf/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/PDB/mmtf/__pycache__'
'usr/lib/python3.12/site-packages/Bio/SearchIO/InterproscanIO/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/SearchIO/InterproscanIO/__pycache__'
'usr/lib/python3.12/site-packages/Bio/SearchIO/BlastIO/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/SearchIO/BlastIO/__pycache__'
'usr/lib/python3.12/site-packages/Bio/SearchIO/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/SearchIO/__pycache__'
'usr/lib/python3.12/site-packages/Bio/SearchIO/_model/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/SearchIO/_model/__pycache__'
'usr/lib/python3.12/site-packages/Bio/SearchIO/HmmerIO/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/SearchIO/HmmerIO/__pycache__'
'usr/lib/python3.12/site-packages/Bio/SearchIO/ExonerateIO/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/SearchIO/ExonerateIO/__pycache__'
'usr/lib/python3.12/site-packages/Bio/SearchIO/HHsuiteIO/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/SearchIO/HHsuiteIO/__pycache__'
'usr/lib/python3.12/site-packages/Bio/SeqUtils/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/SeqUtils/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Emboss/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Emboss/__pycache__'
'usr/lib/python3.12/site-packages/Bio/SCOP/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/SCOP/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Pathway/Rep/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Pathway/Rep/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Pathway/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Pathway/__pycache__'
'usr/lib/python3.12/site-packages/Bio/motifs/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/motifs/__pycache__'
'usr/lib/python3.12/site-packages/Bio/motifs/jaspar/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/motifs/jaspar/__pycache__'
'usr/lib/python3.12/site-packages/Bio/motifs/applications/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/motifs/applications/__pycache__'
'usr/lib/python3.12/site-packages/Bio/SVDSuperimposer/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/SVDSuperimposer/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Nexus/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Nexus/__pycache__'
'usr/lib/python3.12/site-packages/Bio/AlignIO/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/AlignIO/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Affy/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Affy/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Compass/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Compass/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Data/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Data/__pycache__'
'usr/lib/python3.12/site-packages/Bio/Blast/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/Blast/__pycache__'
'usr/lib/python3.12/site-packages/Bio/NMR/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/Bio/NMR/__pycache__'
'usr/lib/python3.12/site-packages/BioSQL/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.12/site-packages/BioSQL/__pycache__'
>>> py3-biopython-pyc*: Preparing subpackage py3-biopython-pyc...
>>> py3-biopython-pyc*: Running postcheck for py3-biopython-pyc
>>> py3-biopython*: Running postcheck for py3-biopython
>>> py3-biopython*: Preparing package py3-biopython...
>>> py3-biopython*: Stripping binaries
>>> py3-biopython*: Scanning shared objects
>>> py3-biopython-pyc*: Tracing dependencies...
	python3~3.12
>>> py3-biopython-pyc*: Package size: 6.4 MB
>>> py3-biopython-pyc*: Compressing data...
>>> py3-biopython-pyc*: Create checksum...
>>> py3-biopython-pyc*: Create py3-biopython-pyc-1.85-r0.apk
>>> py3-biopython*: Tracing dependencies...
	py3-numpy
	python3
	python3~3.12
	so:libc.musl-x86.so.1
>>> py3-biopython*: Package size: 11.2 MB
>>> py3-biopython*: Compressing data...
>>> py3-biopython*: Create checksum...
>>> py3-biopython*: Create py3-biopython-1.85-r0.apk
>>> py3-biopython: Build complete at Thu, 06 Nov 2025 20:53:57 +0000 elapsed time 0h 0m 38s
>>> py3-biopython: Cleaning up srcdir
>>> py3-biopython: Cleaning up pkgdir
>>> py3-biopython: Uninstalling dependencies...
( 1/32) Purging .makedepends-py3-biopython (20251106.205335)
( 2/32) Purging py3-gpep517-pyc (19-r1)
( 3/32) Purging py3-gpep517 (19-r1)
( 4/32) Purging py3-installer-pyc (0.7.0-r2)
( 5/32) Purging py3-installer (0.7.0-r2)
( 6/32) Purging py3-setuptools-pyc (80.9.0-r2)
( 7/32) Purging py3-setuptools (80.9.0-r2)
( 8/32) Purging py3-wheel-pyc (0.46.1-r0)
( 9/32) Purging py3-wheel (0.46.1-r0)
(10/32) Purging py3-packaging-pyc (25.0-r0)
(11/32) Purging py3-packaging (25.0-r0)
(12/32) Purging py3-parsing-pyc (3.2.3-r0)
(13/32) Purging py3-parsing (3.2.3-r0)
(14/32) Purging py3-numpy-dev (2.3.4-r0)
(15/32) Purging py3-numpy-tests (2.3.4-r0)
(16/32) Purging py3-numpy-pyc (2.3.4-r0)
(17/32) Purging py3-numpy (2.3.4-r0)
(18/32) Purging openblas (0.3.30-r0)
(19/32) Purging python3-dev (3.12.12-r0)
(20/32) Purging python3-pyc (3.12.12-r0)
(21/32) Purging python3-pycache-pyc0 (3.12.12-r0)
(22/32) Purging pyc (3.12.12-r0)
(23/32) Purging python3 (3.12.12-r0)
(24/32) Purging gdbm (1.26-r0)
(25/32) Purging libbz2 (1.0.8-r6)
(26/32) Purging libffi (3.5.2-r0)
(27/32) Purging libgfortran (15.2.0-r2)
(28/32) Purging libpanelw (6.5_p20251010-r0)
(29/32) Purging libquadmath (15.2.0-r2)
(30/32) Purging mpdecimal (4.0.1-r0)
(31/32) Purging sqlite-libs (3.51.0-r0)
(32/32) Purging xz-libs (5.8.1-r0)
busybox-1.37.0-r24.trigger: Executing script...
OK: 426 MiB in 105 packages
>>> py3-biopython: Updating the community/x86 repository index...
>>> py3-biopython: Signing the index...