>>> py3-rtree: Building testing/py3-rtree 1.4.0-r2 (using abuild 3.15.0-r2) started Mon, 14 Jul 2025 03:34:51 +0000 >>> py3-rtree: Validating /home/buildozer/aports/testing/py3-rtree/APKBUILD... >>> py3-rtree: Analyzing dependencies... >>> py3-rtree: Installing for build: build-base python3 libspatialindex-dev py3-setuptools py3-wheel py3-gpep517 py3-pytest py3-numpy ( 1/41) Installing libbz2 (1.0.8-r6) ( 2/41) Installing libffi (3.5.1-r0) ( 3/41) Installing gdbm (1.24-r0) ( 4/41) Installing xz-libs (5.8.1-r0) ( 5/41) Installing mpdecimal (4.0.1-r0) ( 6/41) Installing libpanelw (6.5_p20250705-r0) ( 7/41) Installing sqlite-libs (3.50.2-r0) ( 8/41) Installing python3 (3.12.11-r0) ( 9/41) Installing python3-pycache-pyc0 (3.12.11-r0) (10/41) Installing pyc (3.12.11-r0) (11/41) Installing python3-pyc (3.12.11-r0) (12/41) Installing libspatialindex (2.1.0-r0) (13/41) Installing libspatialindex-dev (2.1.0-r0) (14/41) Installing py3-parsing (3.2.3-r0) (15/41) Installing py3-parsing-pyc (3.2.3-r0) (16/41) Installing py3-packaging (25.0-r0) (17/41) Installing py3-packaging-pyc (25.0-r0) (18/41) Installing py3-setuptools (80.9.0-r0) (19/41) Installing py3-setuptools-pyc (80.9.0-r0) (20/41) Installing py3-wheel (0.46.1-r0) (21/41) Installing py3-wheel-pyc (0.46.1-r0) (22/41) Installing py3-installer (0.7.0-r2) (23/41) Installing py3-installer-pyc (0.7.0-r2) (24/41) Installing py3-gpep517 (19-r0) (25/41) Installing py3-gpep517-pyc (19-r0) (26/41) Installing py3-iniconfig (2.1.0-r0) (27/41) Installing py3-iniconfig-pyc (2.1.0-r0) (28/41) Installing py3-pluggy (1.6.0-r0) (29/41) Installing py3-pluggy-pyc (1.6.0-r0) (30/41) Installing py3-py (1.11.0-r4) (31/41) Installing py3-py-pyc (1.11.0-r4) (32/41) Installing py3-pygments (2.19.2-r0) (33/41) Installing py3-pygments-pyc (2.19.2-r0) (34/41) Installing py3-pytest (8.4.1-r0) (35/41) Installing py3-pytest-pyc (8.4.1-r0) (36/41) Installing libgfortran (14.3.0-r6) (37/41) Installing openblas (0.3.30-r0) (38/41) Installing py3-numpy (2.3.1-r0) (39/41) Installing py3-numpy-tests (2.3.1-r0) (40/41) Installing py3-numpy-pyc (2.3.1-r0) (41/41) Installing .makedepends-py3-rtree (20250714.033452) busybox-1.37.0-r19.trigger: Executing script... OK: 468 MiB in 149 packages >>> py3-rtree: Cleaning up srcdir >>> py3-rtree: Cleaning up pkgdir >>> py3-rtree: Cleaning up tmpdir >>> py3-rtree: Fetching https://distfiles.alpinelinux.org/distfiles/edge//py3-rtree-1.4.0.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 53713 100 53713 0 0 118k 0 --:--:-- --:--:-- --:--:-- 118k >>> py3-rtree: Fetching https://distfiles.alpinelinux.org/distfiles/edge//py3-rtree-1.4.0.tar.gz >>> py3-rtree: Checking sha512sums... py3-rtree-1.4.0.tar.gz: OK >>> py3-rtree: Unpacking /var/cache/distfiles/edge/py3-rtree-1.4.0.tar.gz... 2025-07-14 03:34:53,849 gpep517 INFO Building wheel via backend setuptools.build_meta :7: DeprecationWarning: The 'wheel.bdist_wheel' module has been removed. Please update your setuptools to v70.1 or later. If you're explicitly importing 'wheel.bdist_wheel', please update your import to point to 'setuptools.command.bdist_wheel' instead. /usr/lib/python3.12/site-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated !! ******************************************************************************** Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). By 2026-Feb-18, you need to update your project and remove deprecated calls or your builds will no longer be supported. See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! corresp(dist, value, root_dir) /usr/lib/python3.12/site-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: MIT License See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! dist._finalize_license_expression() /usr/lib/python3.12/site-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: MIT License See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! self._finalize_license_expression() 2025-07-14 03:34:53,885 root INFO running bdist_wheel 2025-07-14 03:34:53,896 root INFO running build 2025-07-14 03:34:53,896 root INFO running build_py 2025-07-14 03:34:53,899 root INFO creating build/lib.linux-s390x-cpython-312/rtree 2025-07-14 03:34:53,899 root INFO copying rtree/__init__.py -> build/lib.linux-s390x-cpython-312/rtree 2025-07-14 03:34:53,899 root INFO copying rtree/exceptions.py -> build/lib.linux-s390x-cpython-312/rtree 2025-07-14 03:34:53,899 root INFO copying rtree/finder.py -> build/lib.linux-s390x-cpython-312/rtree 2025-07-14 03:34:53,899 root INFO copying rtree/index.py -> build/lib.linux-s390x-cpython-312/rtree 2025-07-14 03:34:53,899 root INFO copying rtree/core.py -> build/lib.linux-s390x-cpython-312/rtree 2025-07-14 03:34:53,900 root INFO copying rtree/py.typed -> build/lib.linux-s390x-cpython-312/rtree 2025-07-14 03:34:53,900 root INFO running build_ext 2025-07-14 03:34:53,903 root INFO installing to build/bdist.linux-s390x/wheel 2025-07-14 03:34:53,903 root INFO running install 2025-07-14 03:34:53,912 root INFO running install_lib 2025-07-14 03:34:53,914 root INFO creating build/bdist.linux-s390x/wheel 2025-07-14 03:34:53,914 root INFO creating build/bdist.linux-s390x/wheel/rtree 2025-07-14 03:34:53,914 root INFO copying build/lib.linux-s390x-cpython-312/rtree/__init__.py -> build/bdist.linux-s390x/wheel/./rtree 2025-07-14 03:34:53,914 root INFO copying build/lib.linux-s390x-cpython-312/rtree/exceptions.py -> build/bdist.linux-s390x/wheel/./rtree 2025-07-14 03:34:53,914 root INFO copying build/lib.linux-s390x-cpython-312/rtree/finder.py -> build/bdist.linux-s390x/wheel/./rtree 2025-07-14 03:34:53,914 root INFO copying build/lib.linux-s390x-cpython-312/rtree/py.typed -> build/bdist.linux-s390x/wheel/./rtree 2025-07-14 03:34:53,915 root INFO copying build/lib.linux-s390x-cpython-312/rtree/index.py -> build/bdist.linux-s390x/wheel/./rtree 2025-07-14 03:34:53,915 root INFO copying build/lib.linux-s390x-cpython-312/rtree/core.py -> build/bdist.linux-s390x/wheel/./rtree 2025-07-14 03:34:53,915 root INFO running install_egg_info 2025-07-14 03:34:53,917 root INFO running egg_info 2025-07-14 03:34:53,919 root INFO creating rtree.egg-info 2025-07-14 03:34:53,919 root INFO writing rtree.egg-info/PKG-INFO 2025-07-14 03:34:53,920 root INFO writing dependency_links to rtree.egg-info/dependency_links.txt 2025-07-14 03:34:53,920 root INFO writing top-level names to rtree.egg-info/top_level.txt 2025-07-14 03:34:53,920 root INFO writing manifest file 'rtree.egg-info/SOURCES.txt' 2025-07-14 03:34:53,923 root INFO reading manifest file 'rtree.egg-info/SOURCES.txt' 2025-07-14 03:34:53,923 root INFO reading manifest template 'MANIFEST.in' 2025-07-14 03:34:53,924 root INFO adding license file 'LICENSE.txt' 2025-07-14 03:34:53,925 root INFO writing manifest file 'rtree.egg-info/SOURCES.txt' 2025-07-14 03:34:53,925 root INFO Copying rtree.egg-info to build/bdist.linux-s390x/wheel/./rtree-1.4.0-py3.12.egg-info 2025-07-14 03:34:53,926 root INFO running install_scripts 2025-07-14 03:34:53,929 root INFO creating build/bdist.linux-s390x/wheel/rtree-1.4.0.dist-info/WHEEL 2025-07-14 03:34:53,929 wheel INFO creating '/home/buildozer/aports/testing/py3-rtree/src/rtree-1.4.0/.dist/.tmp-wqrev6sa/rtree-1.4.0-cp312-cp312-linux_s390x.whl' and adding 'build/bdist.linux-s390x/wheel' to it 2025-07-14 03:34:53,929 wheel INFO adding 'rtree/__init__.py' 2025-07-14 03:34:53,930 wheel INFO adding 'rtree/core.py' 2025-07-14 03:34:53,930 wheel INFO adding 'rtree/exceptions.py' 2025-07-14 03:34:53,930 wheel INFO adding 'rtree/finder.py' 2025-07-14 03:34:53,930 wheel INFO adding 'rtree/index.py' 2025-07-14 03:34:53,930 wheel INFO adding 'rtree/py.typed' 2025-07-14 03:34:53,931 wheel INFO adding 'rtree-1.4.0.dist-info/licenses/LICENSE.txt' 2025-07-14 03:34:53,931 wheel INFO adding 'rtree-1.4.0.dist-info/METADATA' 2025-07-14 03:34:53,931 wheel INFO adding 'rtree-1.4.0.dist-info/WHEEL' 2025-07-14 03:34:53,931 wheel INFO adding 'rtree-1.4.0.dist-info/top_level.txt' 2025-07-14 03:34:53,931 wheel INFO adding 'rtree-1.4.0.dist-info/RECORD' 2025-07-14 03:34:53,931 root INFO removing build/bdist.linux-s390x/wheel 2025-07-14 03:34:53,931 gpep517 INFO The backend produced .dist/rtree-1.4.0-cp312-cp312-linux_s390x.whl rtree-1.4.0-cp312-cp312-linux_s390x.whl 2025-07-14 03:34:54,085 gpep517 INFO Installing .dist/rtree-1.4.0-cp312-cp312-linux_s390x.whl into .testenv 2025-07-14 03:34:54,118 gpep517 INFO Installation complete ============================= test session starts ============================== platform linux -- Python 3.12.11, pytest-8.4.1, pluggy-1.6.0 -- /home/buildozer/aports/testing/py3-rtree/src/rtree-1.4.0/.testenv/bin/python3 cachedir: .pytest_cache SIDX version: 2.1.0 NumPy version: 2.3.1 rootdir: /home/buildozer/aports/testing/py3-rtree/src/rtree-1.4.0 configfile: pyproject.toml collecting ... collected 53 items rtree/index.py::rtree.index.Index.__init__ PASSED [ 1%] rtree/index.py::rtree.index.Index.contains PASSED [ 3%] rtree/index.py::rtree.index.Index.count PASSED [ 5%] rtree/index.py::rtree.index.Index.deinterleave PASSED [ 7%] rtree/index.py::rtree.index.Index.delete PASSED [ 9%] rtree/index.py::rtree.index.Index.insert PASSED [ 11%] rtree/index.py::rtree.index.Index.interleave PASSED [ 13%] rtree/index.py::rtree.index.Index.intersection PASSED [ 15%] rtree/index.py::rtree.index.Index.nearest PASSED [ 16%] rtree/index.py::rtree.index.RtreeContainer.__init__ PASSED [ 18%] rtree/index.py::rtree.index.RtreeContainer.delete PASSED [ 20%] rtree/index.py::rtree.index.RtreeContainer.insert PASSED [ 22%] rtree/index.py::rtree.index.RtreeContainer.intersection PASSED [ 24%] rtree/index.py::rtree.index.RtreeContainer.nearest PASSED [ 26%] tests/test_finder.py::test_load PASSED [ 28%] tests/test_finder.py::test_get_include PASSED [ 30%] tests/test_index.py::IndexCount::test_get_size PASSED [ 32%] tests/test_index.py::IndexCount::test_len PASSED [ 33%] tests/test_index.py::IndexBounds::test_invalid_specifications PASSED [ 35%] tests/test_index.py::IndexProperties::test_index_properties PASSED [ 37%] tests/test_index.py::IndexProperties::test_invalid_properties PASSED [ 39%] tests/test_index.py::IndexProperties::test_result_limit PASSED [ 41%] tests/test_index.py::IndexProperties::test_result_offset PASSED [ 43%] tests/test_index.py::TestPickling::test_index XFAIL [ 45%] tests/test_index.py::TestPickling::test_property PASSED [ 47%] tests/test_index.py::IndexContainer::test_container PASSED [ 49%] tests/test_index.py::IndexIntersection::test_double_insertion PASSED [ 50%] tests/test_index.py::IndexIntersection::test_intersection PASSED [ 52%] tests/test_index.py::IndexIntersection::test_objects PASSED [ 54%] tests/test_index.py::TestIndexIntersectionUnion::test_intersection_interleaved PASSED [ 56%] tests/test_index.py::TestIndexIntersectionUnion::test_intersection_uninterleaved PASSED [ 58%] tests/test_index.py::TestIndexIntersectionUnion::test_intersection_mismatch PASSED [ 60%] tests/test_index.py::TestIndexIntersectionUnion::test_union_interleaved PASSED [ 62%] tests/test_index.py::TestIndexIntersectionUnion::test_union_uninterleaved PASSED [ 64%] tests/test_index.py::TestIndexIntersectionUnion::test_union_mismatch PASSED [ 66%] tests/test_index.py::IndexSerialization::test_custom_filenames PASSED [ 67%] tests/test_index.py::IndexSerialization::test_interleaving PASSED [ 69%] tests/test_index.py::IndexSerialization::test_overwrite PASSED [ 71%] tests/test_index.py::IndexSerialization::test_pickling PASSED [ 73%] tests/test_index.py::IndexSerialization::test_unicode_filenames PASSED [ 75%] tests/test_index.py::IndexNearest::test_nearest_basic PASSED [ 77%] tests/test_index.py::IndexNearest::test_nearest_equidistant PASSED [ 79%] tests/test_index.py::IndexNearest::test_nearest_object PASSED [ 81%] tests/test_index.py::IndexDelete::test_deletion PASSED [ 83%] tests/test_index.py::IndexMoreDimensions::test_3d PASSED [ 84%] tests/test_index.py::IndexMoreDimensions::test_4d PASSED [ 86%] tests/test_index.py::IndexStream::test_empty_stream PASSED [ 88%] tests/test_index.py::IndexStream::test_exception_at_beginning_of_generator PASSED [ 90%] tests/test_index.py::IndexStream::test_exception_in_generator PASSED [ 92%] tests/test_index.py::IndexStream::test_stream_input PASSED [ 94%] tests/test_index.py::IndexCustomStorage::test_custom_storage PASSED [ 96%] tests/test_index.py::IndexCustomStorage::test_custom_storage_reopening PASSED [ 98%] tests/test_tpr.py::TPRTests::test_tpr PASSED [100%] ======================== 52 passed, 1 xfailed in 0.27s ========================= /usr/lib/python3.12/site-packages/_pytest/pathlib.py:96: PytestWarning: (rm_rf) error removing /tmp/pytest-of-buildozer/garbage-70e8ad43-47d6-488e-838a-eac020f0fdd6/popen-gw3/test_discovery_via_path_in_non0 : [Errno 39] Directory not empty: '/tmp/pytest-of-buildozer/garbage-70e8ad43-47d6-488e-838a-eac020f0fdd6/popen-gw3/test_discovery_via_path_in_non0' warnings.warn( /usr/lib/python3.12/site-packages/_pytest/pathlib.py:96: PytestWarning: (rm_rf) error removing /tmp/pytest-of-buildozer/garbage-70e8ad43-47d6-488e-838a-eac020f0fdd6/popen-gw3 : [Errno 39] Directory not empty: '/tmp/pytest-of-buildozer/garbage-70e8ad43-47d6-488e-838a-eac020f0fdd6/popen-gw3' warnings.warn( /usr/lib/python3.12/site-packages/_pytest/pathlib.py:96: PytestWarning: (rm_rf) error removing /tmp/pytest-of-buildozer/garbage-70e8ad43-47d6-488e-838a-eac020f0fdd6 : [Errno 39] Directory not empty: '/tmp/pytest-of-buildozer/garbage-70e8ad43-47d6-488e-838a-eac020f0fdd6' warnings.warn( >>> py3-rtree: Entering fakeroot... 2025-07-14 03:34:54,846 gpep517 INFO Installing .dist/rtree-1.4.0-cp312-cp312-linux_s390x.whl into /home/buildozer/aports/testing/py3-rtree/pkg/py3-rtree 2025-07-14 03:34:54,881 gpep517 INFO Installation complete >>> py3-rtree-pyc*: Running split function pyc... 'usr/lib/python3.12/site-packages/rtree/__pycache__' -> '/home/buildozer/aports/testing/py3-rtree/pkg/py3-rtree-pyc/usr/lib/python3.12/site-packages/rtree/__pycache__' >>> py3-rtree-pyc*: Preparing subpackage py3-rtree-pyc... >>> py3-rtree-pyc*: Running postcheck for py3-rtree-pyc >>> py3-rtree*: Running postcheck for py3-rtree >>> py3-rtree*: Preparing package py3-rtree... >>> py3-rtree-pyc*: Tracing dependencies... python3 libspatialindex-dev python3~3.12 >>> py3-rtree-pyc*: Package size: 163.8 KB >>> py3-rtree-pyc*: Compressing data... >>> py3-rtree-pyc*: Create checksum... >>> py3-rtree-pyc*: Create py3-rtree-pyc-1.4.0-r2.apk >>> py3-rtree*: Tracing dependencies... python3 libspatialindex-dev python3~3.12 >>> py3-rtree*: Package size: 127.5 KB >>> py3-rtree*: Compressing data... >>> py3-rtree*: Create checksum... >>> py3-rtree*: Create py3-rtree-1.4.0-r2.apk >>> py3-rtree: Build complete at Mon, 14 Jul 2025 03:34:55 +0000 elapsed time 0h 0m 4s >>> py3-rtree: Cleaning up srcdir >>> py3-rtree: Cleaning up pkgdir >>> py3-rtree: Uninstalling dependencies... ( 1/41) Purging .makedepends-py3-rtree (20250714.033452) ( 2/41) Purging libspatialindex-dev (2.1.0-r0) ( 3/41) Purging libspatialindex (2.1.0-r0) ( 4/41) Purging py3-setuptools-pyc (80.9.0-r0) ( 5/41) Purging py3-setuptools (80.9.0-r0) ( 6/41) Purging py3-wheel-pyc (0.46.1-r0) ( 7/41) Purging py3-wheel (0.46.1-r0) ( 8/41) Purging py3-gpep517-pyc (19-r0) ( 9/41) Purging py3-gpep517 (19-r0) (10/41) Purging py3-installer-pyc (0.7.0-r2) (11/41) Purging py3-installer (0.7.0-r2) (12/41) Purging py3-pytest-pyc (8.4.1-r0) (13/41) Purging py3-pytest (8.4.1-r0) (14/41) Purging py3-iniconfig-pyc (2.1.0-r0) (15/41) Purging py3-iniconfig (2.1.0-r0) (16/41) Purging py3-packaging-pyc (25.0-r0) (17/41) Purging py3-packaging (25.0-r0) (18/41) Purging py3-parsing-pyc (3.2.3-r0) (19/41) Purging py3-parsing (3.2.3-r0) (20/41) Purging py3-pluggy-pyc (1.6.0-r0) (21/41) Purging py3-pluggy (1.6.0-r0) (22/41) Purging py3-py-pyc (1.11.0-r4) (23/41) Purging py3-py (1.11.0-r4) (24/41) Purging py3-pygments-pyc (2.19.2-r0) (25/41) Purging py3-pygments (2.19.2-r0) (26/41) Purging py3-numpy-tests (2.3.1-r0) (27/41) Purging py3-numpy-pyc (2.3.1-r0) (28/41) Purging py3-numpy (2.3.1-r0) (29/41) Purging openblas (0.3.30-r0) (30/41) Purging python3-pyc (3.12.11-r0) (31/41) Purging python3-pycache-pyc0 (3.12.11-r0) (32/41) Purging pyc (3.12.11-r0) (33/41) Purging python3 (3.12.11-r0) (34/41) Purging gdbm (1.24-r0) (35/41) Purging libbz2 (1.0.8-r6) (36/41) Purging libffi (3.5.1-r0) (37/41) Purging libgfortran (14.3.0-r6) (38/41) Purging libpanelw (6.5_p20250705-r0) (39/41) Purging mpdecimal (4.0.1-r0) (40/41) Purging sqlite-libs (3.50.2-r0) (41/41) Purging xz-libs (5.8.1-r0) busybox-1.37.0-r19.trigger: Executing script... OK: 361 MiB in 108 packages >>> py3-rtree: Updating the testing/s390x repository index... >>> py3-rtree: Signing the index...