>>> py3-biopython: Building community/py3-biopython 1.86-r1 (using abuild 3.17.0_rc1-r2) started Thu, 30 Apr 2026 05:15:35 +0000 >>> py3-biopython: Validating /home/buildozer/aports/community/py3-biopython/APKBUILD... >>> py3-biopython: Analyzing dependencies... >>> py3-biopython: Installing for build: build-base py3-numpy python3 py3-gpep517 py3-setuptools py3-wheel py3-numpy-dev python3-dev ( 1/32) Installing libbz2 (1.0.8-r6) ( 2/32) Installing libffi (3.5.2-r1) ( 3/32) Installing gdbm (1.26-r0) ( 4/32) Installing xz-libs (5.8.3-r0) ( 5/32) Installing mpdecimal (4.0.1-r0) ( 6/32) Installing libpanelw (6.6_p20260404-r0) ( 7/32) Installing readline (8.3.3-r1) ( 8/32) Installing sqlite-libs (3.53.0-r0) ( 9/32) Installing python3 (3.14.3-r0) (10/32) Installing python3-pycache-pyc0 (3.14.3-r0) (11/32) Installing pyc (3.14.3-r0) (12/32) Installing py3-numpy-pyc (2.4.4-r0) (13/32) Installing python3-pyc (3.14.3-r0) (14/32) Installing libgfortran (15.2.0-r3) (15/32) Installing openblas (0.3.30-r2) (16/32) Installing py3-numpy (2.4.4-r0) (17/32) Installing py3-numpy-tests (2.4.4-r0) (18/32) Installing py3-installer (1.0.0-r0) (19/32) Installing py3-installer-pyc (1.0.0-r0) (20/32) Installing py3-gpep517 (19-r2) (21/32) Installing py3-gpep517-pyc (19-r2) (22/32) Installing py3-parsing (3.3.2-r1) (23/32) Installing py3-parsing-pyc (3.3.2-r1) (24/32) Installing py3-packaging (26.2-r0) (25/32) Installing py3-packaging-pyc (26.2-r0) (26/32) Installing py3-setuptools (82.0.1-r1) (27/32) Installing py3-setuptools-pyc (82.0.1-r1) (28/32) Installing py3-wheel (0.47.0-r0) (29/32) Installing py3-wheel-pyc (0.47.0-r0) (30/32) Installing py3-numpy-dev (2.4.4-r0) (31/32) Installing python3-dev (3.14.3-r0) (32/32) Installing .makedepends-py3-biopython (20260430.051542) Executing busybox-1.37.0-r31.trigger OK: 920.7 MiB in 135 packages >>> py3-biopython: Cleaning up srcdir >>> py3-biopython: Cleaning up pkgdir >>> py3-biopython: Cleaning up tmpdir >>> py3-biopython: Fetching https://distfiles.alpinelinux.org/distfiles/v3.24/biopython-1.86.tar.gz Connecting to distfiles.alpinelinux.org (172.105.82.32:443) saving to '/var/cache/distfiles/biopython-1.86.tar.gz.part' biopython-1.86.tar.g 100% |********************************| 18.9M 0:00:00 ETA '/var/cache/distfiles/biopython-1.86.tar.gz.part' saved /var/cache/distfiles/biopython-1.86.tar.gz: OK >>> py3-biopython: Fetching https://distfiles.alpinelinux.org/distfiles/v3.24/biopython-1.86.tar.gz /var/cache/distfiles/biopython-1.86.tar.gz: OK >>> py3-biopython: Unpacking /var/cache/distfiles/biopython-1.86.tar.gz... 2026-04-30 05:15:47,629 gpep517 INFO Building wheel via backend setuptools.build_meta:__legacy__ /usr/lib/python3.14/site-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: Freely Distributable See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! self._finalize_license_expression() 2026-04-30 05:15:47,661 root INFO running bdist_wheel 2026-04-30 05:15:47,682 root INFO running build 2026-04-30 05:15:47,683 root INFO running build_py 2026-04-30 05:15:47,687 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio 2026-04-30 05:15:47,688 root INFO copying Bio/pairwise2.py -> build/lib.linux-loongarch64-cpython-314/Bio 2026-04-30 05:15:47,689 root INFO copying Bio/SeqRecord.py -> build/lib.linux-loongarch64-cpython-314/Bio 2026-04-30 05:15:47,689 root INFO copying Bio/_utils.py -> build/lib.linux-loongarch64-cpython-314/Bio 2026-04-30 05:15:47,689 root INFO copying Bio/SeqFeature.py -> build/lib.linux-loongarch64-cpython-314/Bio 2026-04-30 05:15:47,690 root INFO copying Bio/File.py -> build/lib.linux-loongarch64-cpython-314/Bio 2026-04-30 05:15:47,690 root INFO copying Bio/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio 2026-04-30 05:15:47,691 root INFO copying Bio/Seq.py -> build/lib.linux-loongarch64-cpython-314/Bio 2026-04-30 05:15:47,691 root INFO copying Bio/bgzf.py -> build/lib.linux-loongarch64-cpython-314/Bio 2026-04-30 05:15:47,692 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/Affy 2026-04-30 05:15:47,692 root INFO copying Bio/Affy/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/Affy 2026-04-30 05:15:47,692 root INFO copying Bio/Affy/CelFile.py -> build/lib.linux-loongarch64-cpython-314/Bio/Affy 2026-04-30 05:15:47,693 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/Align 2026-04-30 05:15:47,693 root INFO copying Bio/Align/chain.py -> build/lib.linux-loongarch64-cpython-314/Bio/Align 2026-04-30 05:15:47,694 root INFO copying Bio/Align/AlignInfo.py -> build/lib.linux-loongarch64-cpython-314/Bio/Align 2026-04-30 05:15:47,694 root INFO copying Bio/Align/nexus.py -> build/lib.linux-loongarch64-cpython-314/Bio/Align 2026-04-30 05:15:47,695 root INFO copying Bio/Align/interfaces.py -> build/lib.linux-loongarch64-cpython-314/Bio/Align 2026-04-30 05:15:47,695 root INFO copying Bio/Align/exonerate.py -> build/lib.linux-loongarch64-cpython-314/Bio/Align 2026-04-30 05:15:47,695 root INFO copying Bio/Align/bigmaf.py -> build/lib.linux-loongarch64-cpython-314/Bio/Align 2026-04-30 05:15:47,696 root INFO copying Bio/Align/sam.py -> build/lib.linux-loongarch64-cpython-314/Bio/Align 2026-04-30 05:15:47,696 root INFO copying Bio/Align/bed.py -> build/lib.linux-loongarch64-cpython-314/Bio/Align 2026-04-30 05:15:47,697 root INFO copying Bio/Align/hhr.py -> build/lib.linux-loongarch64-cpython-314/Bio/Align 2026-04-30 05:15:47,697 root INFO copying Bio/Align/phylip.py -> build/lib.linux-loongarch64-cpython-314/Bio/Align 2026-04-30 05:15:47,697 root INFO copying Bio/Align/msf.py -> build/lib.linux-loongarch64-cpython-314/Bio/Align 2026-04-30 05:15:47,698 root INFO copying Bio/Align/bigbed.py -> build/lib.linux-loongarch64-cpython-314/Bio/Align 2026-04-30 05:15:47,698 root INFO copying Bio/Align/mauve.py -> build/lib.linux-loongarch64-cpython-314/Bio/Align 2026-04-30 05:15:47,699 root INFO copying Bio/Align/emboss.py -> build/lib.linux-loongarch64-cpython-314/Bio/Align 2026-04-30 05:15:47,699 root INFO copying Bio/Align/tabular.py -> build/lib.linux-loongarch64-cpython-314/Bio/Align 2026-04-30 05:15:47,699 root INFO copying Bio/Align/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/Align 2026-04-30 05:15:47,700 root INFO copying Bio/Align/analysis.py -> build/lib.linux-loongarch64-cpython-314/Bio/Align 2026-04-30 05:15:47,701 root INFO copying Bio/Align/psl.py -> build/lib.linux-loongarch64-cpython-314/Bio/Align 2026-04-30 05:15:47,701 root INFO copying Bio/Align/bigpsl.py -> build/lib.linux-loongarch64-cpython-314/Bio/Align 2026-04-30 05:15:47,701 root INFO copying Bio/Align/clustal.py -> build/lib.linux-loongarch64-cpython-314/Bio/Align 2026-04-30 05:15:47,702 root INFO copying Bio/Align/a2m.py -> build/lib.linux-loongarch64-cpython-314/Bio/Align 2026-04-30 05:15:47,702 root INFO copying Bio/Align/stockholm.py -> build/lib.linux-loongarch64-cpython-314/Bio/Align 2026-04-30 05:15:47,703 root INFO copying Bio/Align/fasta.py -> build/lib.linux-loongarch64-cpython-314/Bio/Align 2026-04-30 05:15:47,703 root INFO copying Bio/Align/maf.py -> build/lib.linux-loongarch64-cpython-314/Bio/Align 2026-04-30 05:15:47,703 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices 2026-04-30 05:15:47,704 root INFO copying Bio/Align/substitution_matrices/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices 2026-04-30 05:15:47,704 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/AlignIO 2026-04-30 05:15:47,705 root INFO copying Bio/AlignIO/MsfIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/AlignIO 2026-04-30 05:15:47,705 root INFO copying Bio/AlignIO/EmbossIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/AlignIO 2026-04-30 05:15:47,705 root INFO copying Bio/AlignIO/StockholmIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/AlignIO 2026-04-30 05:15:47,706 root INFO copying Bio/AlignIO/ClustalIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/AlignIO 2026-04-30 05:15:47,706 root INFO copying Bio/AlignIO/MafIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/AlignIO 2026-04-30 05:15:47,707 root INFO copying Bio/AlignIO/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/AlignIO 2026-04-30 05:15:47,707 root INFO copying Bio/AlignIO/FastaIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/AlignIO 2026-04-30 05:15:47,707 root INFO copying Bio/AlignIO/PhylipIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/AlignIO 2026-04-30 05:15:47,708 root INFO copying Bio/AlignIO/MauveIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/AlignIO 2026-04-30 05:15:47,708 root INFO copying Bio/AlignIO/NexusIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/AlignIO 2026-04-30 05:15:47,709 root INFO copying Bio/AlignIO/Interfaces.py -> build/lib.linux-loongarch64-cpython-314/Bio/AlignIO 2026-04-30 05:15:47,709 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/Alphabet 2026-04-30 05:15:47,709 root INFO copying Bio/Alphabet/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/Alphabet 2026-04-30 05:15:47,710 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/Blast 2026-04-30 05:15:47,710 root INFO copying Bio/Blast/_writers.py -> build/lib.linux-loongarch64-cpython-314/Bio/Blast 2026-04-30 05:15:47,711 root INFO copying Bio/Blast/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/Blast 2026-04-30 05:15:47,711 root INFO copying Bio/Blast/NCBIWWW.py -> build/lib.linux-loongarch64-cpython-314/Bio/Blast 2026-04-30 05:15:47,711 root INFO copying Bio/Blast/NCBIXML.py -> build/lib.linux-loongarch64-cpython-314/Bio/Blast 2026-04-30 05:15:47,712 root INFO copying Bio/Blast/_parser.py -> build/lib.linux-loongarch64-cpython-314/Bio/Blast 2026-04-30 05:15:47,712 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/CAPS 2026-04-30 05:15:47,713 root INFO copying Bio/CAPS/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/CAPS 2026-04-30 05:15:47,713 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/Cluster 2026-04-30 05:15:47,713 root INFO copying Bio/Cluster/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/Cluster 2026-04-30 05:15:47,714 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/codonalign 2026-04-30 05:15:47,714 root INFO copying Bio/codonalign/codonseq.py -> build/lib.linux-loongarch64-cpython-314/Bio/codonalign 2026-04-30 05:15:47,715 root INFO copying Bio/codonalign/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/codonalign 2026-04-30 05:15:47,715 root INFO copying Bio/codonalign/codonalignment.py -> build/lib.linux-loongarch64-cpython-314/Bio/codonalign 2026-04-30 05:15:47,716 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/Compass 2026-04-30 05:15:47,716 root INFO copying Bio/Compass/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/Compass 2026-04-30 05:15:47,716 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/Data 2026-04-30 05:15:47,716 root INFO copying Bio/Data/IUPACData.py -> build/lib.linux-loongarch64-cpython-314/Bio/Data 2026-04-30 05:15:47,717 root INFO copying Bio/Data/PDBData.py -> build/lib.linux-loongarch64-cpython-314/Bio/Data 2026-04-30 05:15:47,717 root INFO copying Bio/Data/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/Data 2026-04-30 05:15:47,718 root INFO copying Bio/Data/CodonTable.py -> build/lib.linux-loongarch64-cpython-314/Bio/Data 2026-04-30 05:15:47,718 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/Emboss 2026-04-30 05:15:47,718 root INFO copying Bio/Emboss/PrimerSearch.py -> build/lib.linux-loongarch64-cpython-314/Bio/Emboss 2026-04-30 05:15:47,719 root INFO copying Bio/Emboss/Primer3.py -> build/lib.linux-loongarch64-cpython-314/Bio/Emboss 2026-04-30 05:15:47,719 root INFO copying Bio/Emboss/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/Emboss 2026-04-30 05:15:47,720 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/Entrez 2026-04-30 05:15:47,720 root INFO copying Bio/Entrez/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez 2026-04-30 05:15:47,720 root INFO copying Bio/Entrez/Parser.py -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez 2026-04-30 05:15:47,722 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/ExPASy 2026-04-30 05:15:47,722 root INFO copying Bio/ExPASy/ScanProsite.py -> build/lib.linux-loongarch64-cpython-314/Bio/ExPASy 2026-04-30 05:15:47,722 root INFO copying Bio/ExPASy/Prodoc.py -> build/lib.linux-loongarch64-cpython-314/Bio/ExPASy 2026-04-30 05:15:47,723 root INFO copying Bio/ExPASy/Prosite.py -> build/lib.linux-loongarch64-cpython-314/Bio/ExPASy 2026-04-30 05:15:47,723 root INFO copying Bio/ExPASy/Enzyme.py -> build/lib.linux-loongarch64-cpython-314/Bio/ExPASy 2026-04-30 05:15:47,724 root INFO copying Bio/ExPASy/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/ExPASy 2026-04-30 05:15:47,724 root INFO copying Bio/ExPASy/cellosaurus.py -> build/lib.linux-loongarch64-cpython-314/Bio/ExPASy 2026-04-30 05:15:47,724 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/GenBank 2026-04-30 05:15:47,725 root INFO copying Bio/GenBank/utils.py -> build/lib.linux-loongarch64-cpython-314/Bio/GenBank 2026-04-30 05:15:47,725 root INFO copying Bio/GenBank/Record.py -> build/lib.linux-loongarch64-cpython-314/Bio/GenBank 2026-04-30 05:15:47,725 root INFO copying Bio/GenBank/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/GenBank 2026-04-30 05:15:47,726 root INFO copying Bio/GenBank/Scanner.py -> build/lib.linux-loongarch64-cpython-314/Bio/GenBank 2026-04-30 05:15:47,727 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/Geo 2026-04-30 05:15:47,727 root INFO copying Bio/Geo/Record.py -> build/lib.linux-loongarch64-cpython-314/Bio/Geo 2026-04-30 05:15:47,727 root INFO copying Bio/Geo/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/Geo 2026-04-30 05:15:47,728 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/Graphics 2026-04-30 05:15:47,728 root INFO copying Bio/Graphics/Comparative.py -> build/lib.linux-loongarch64-cpython-314/Bio/Graphics 2026-04-30 05:15:47,728 root INFO copying Bio/Graphics/KGML_vis.py -> build/lib.linux-loongarch64-cpython-314/Bio/Graphics 2026-04-30 05:15:47,729 root INFO copying Bio/Graphics/BasicChromosome.py -> build/lib.linux-loongarch64-cpython-314/Bio/Graphics 2026-04-30 05:15:47,729 root INFO copying Bio/Graphics/DisplayRepresentation.py -> build/lib.linux-loongarch64-cpython-314/Bio/Graphics 2026-04-30 05:15:47,729 root INFO copying Bio/Graphics/ColorSpiral.py -> build/lib.linux-loongarch64-cpython-314/Bio/Graphics 2026-04-30 05:15:47,730 root INFO copying Bio/Graphics/Distribution.py -> build/lib.linux-loongarch64-cpython-314/Bio/Graphics 2026-04-30 05:15:47,730 root INFO copying Bio/Graphics/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/Graphics 2026-04-30 05:15:47,731 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/Graphics/GenomeDiagram 2026-04-30 05:15:47,731 root INFO copying Bio/Graphics/GenomeDiagram/_LinearDrawer.py -> build/lib.linux-loongarch64-cpython-314/Bio/Graphics/GenomeDiagram 2026-04-30 05:15:47,732 root INFO copying Bio/Graphics/GenomeDiagram/_Colors.py -> build/lib.linux-loongarch64-cpython-314/Bio/Graphics/GenomeDiagram 2026-04-30 05:15:47,732 root INFO copying Bio/Graphics/GenomeDiagram/_AbstractDrawer.py -> build/lib.linux-loongarch64-cpython-314/Bio/Graphics/GenomeDiagram 2026-04-30 05:15:47,732 root INFO copying Bio/Graphics/GenomeDiagram/_CrossLink.py -> build/lib.linux-loongarch64-cpython-314/Bio/Graphics/GenomeDiagram 2026-04-30 05:15:47,733 root INFO copying Bio/Graphics/GenomeDiagram/_CircularDrawer.py -> build/lib.linux-loongarch64-cpython-314/Bio/Graphics/GenomeDiagram 2026-04-30 05:15:47,733 root INFO copying Bio/Graphics/GenomeDiagram/_GraphSet.py -> build/lib.linux-loongarch64-cpython-314/Bio/Graphics/GenomeDiagram 2026-04-30 05:15:47,734 root INFO copying Bio/Graphics/GenomeDiagram/_Graph.py -> build/lib.linux-loongarch64-cpython-314/Bio/Graphics/GenomeDiagram 2026-04-30 05:15:47,734 root INFO copying Bio/Graphics/GenomeDiagram/_Track.py -> build/lib.linux-loongarch64-cpython-314/Bio/Graphics/GenomeDiagram 2026-04-30 05:15:47,734 root INFO copying Bio/Graphics/GenomeDiagram/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/Graphics/GenomeDiagram 2026-04-30 05:15:47,735 root INFO copying Bio/Graphics/GenomeDiagram/_Diagram.py -> build/lib.linux-loongarch64-cpython-314/Bio/Graphics/GenomeDiagram 2026-04-30 05:15:47,735 root INFO copying Bio/Graphics/GenomeDiagram/_Feature.py -> build/lib.linux-loongarch64-cpython-314/Bio/Graphics/GenomeDiagram 2026-04-30 05:15:47,735 root INFO copying Bio/Graphics/GenomeDiagram/_FeatureSet.py -> build/lib.linux-loongarch64-cpython-314/Bio/Graphics/GenomeDiagram 2026-04-30 05:15:47,736 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/HMM 2026-04-30 05:15:47,736 root INFO copying Bio/HMM/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/HMM 2026-04-30 05:15:47,737 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/KEGG 2026-04-30 05:15:47,737 root INFO copying Bio/KEGG/REST.py -> build/lib.linux-loongarch64-cpython-314/Bio/KEGG 2026-04-30 05:15:47,737 root INFO copying Bio/KEGG/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/KEGG 2026-04-30 05:15:47,738 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/KEGG/Compound 2026-04-30 05:15:47,738 root INFO copying Bio/KEGG/Compound/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/KEGG/Compound 2026-04-30 05:15:47,738 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/KEGG/Enzyme 2026-04-30 05:15:47,739 root INFO copying Bio/KEGG/Enzyme/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/KEGG/Enzyme 2026-04-30 05:15:47,739 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/KEGG/Gene 2026-04-30 05:15:47,739 root INFO copying Bio/KEGG/Gene/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/KEGG/Gene 2026-04-30 05:15:47,740 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/KEGG/Map 2026-04-30 05:15:47,740 root INFO copying Bio/KEGG/Map/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/KEGG/Map 2026-04-30 05:15:47,741 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/PDB/mmtf 2026-04-30 05:15:47,741 root INFO copying Bio/PDB/mmtf/DefaultParser.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB/mmtf 2026-04-30 05:15:47,741 root INFO copying Bio/PDB/mmtf/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB/mmtf 2026-04-30 05:15:47,742 root INFO copying Bio/PDB/mmtf/mmtfio.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB/mmtf 2026-04-30 05:15:47,742 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/KEGG/KGML 2026-04-30 05:15:47,742 root INFO copying Bio/KEGG/KGML/KGML_pathway.py -> build/lib.linux-loongarch64-cpython-314/Bio/KEGG/KGML 2026-04-30 05:15:47,743 root INFO copying Bio/KEGG/KGML/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/KEGG/KGML 2026-04-30 05:15:47,743 root INFO copying Bio/KEGG/KGML/KGML_parser.py -> build/lib.linux-loongarch64-cpython-314/Bio/KEGG/KGML 2026-04-30 05:15:47,744 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/Medline 2026-04-30 05:15:47,744 root INFO copying Bio/Medline/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/Medline 2026-04-30 05:15:47,745 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/motifs 2026-04-30 05:15:47,745 root INFO copying Bio/motifs/thresholds.py -> build/lib.linux-loongarch64-cpython-314/Bio/motifs 2026-04-30 05:15:47,745 root INFO copying Bio/motifs/clusterbuster.py -> build/lib.linux-loongarch64-cpython-314/Bio/motifs 2026-04-30 05:15:47,746 root INFO copying Bio/motifs/matrix.py -> build/lib.linux-loongarch64-cpython-314/Bio/motifs 2026-04-30 05:15:47,746 root INFO copying Bio/motifs/meme.py -> build/lib.linux-loongarch64-cpython-314/Bio/motifs 2026-04-30 05:15:47,746 root INFO copying Bio/motifs/mast.py -> build/lib.linux-loongarch64-cpython-314/Bio/motifs 2026-04-30 05:15:47,747 root INFO copying Bio/motifs/minimal.py -> build/lib.linux-loongarch64-cpython-314/Bio/motifs 2026-04-30 05:15:47,747 root INFO copying Bio/motifs/pfm.py -> build/lib.linux-loongarch64-cpython-314/Bio/motifs 2026-04-30 05:15:47,747 root INFO copying Bio/motifs/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/motifs 2026-04-30 05:15:47,748 root INFO copying Bio/motifs/xms.py -> build/lib.linux-loongarch64-cpython-314/Bio/motifs 2026-04-30 05:15:47,748 root INFO copying Bio/motifs/alignace.py -> build/lib.linux-loongarch64-cpython-314/Bio/motifs 2026-04-30 05:15:47,749 root INFO copying Bio/motifs/transfac.py -> build/lib.linux-loongarch64-cpython-314/Bio/motifs 2026-04-30 05:15:47,749 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/motifs/jaspar 2026-04-30 05:15:47,749 root INFO copying Bio/motifs/jaspar/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/motifs/jaspar 2026-04-30 05:15:47,750 root INFO copying Bio/motifs/jaspar/db.py -> build/lib.linux-loongarch64-cpython-314/Bio/motifs/jaspar 2026-04-30 05:15:47,750 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/Nexus 2026-04-30 05:15:47,751 root INFO copying Bio/Nexus/Trees.py -> build/lib.linux-loongarch64-cpython-314/Bio/Nexus 2026-04-30 05:15:47,751 root INFO copying Bio/Nexus/Nodes.py -> build/lib.linux-loongarch64-cpython-314/Bio/Nexus 2026-04-30 05:15:47,751 root INFO copying Bio/Nexus/StandardData.py -> build/lib.linux-loongarch64-cpython-314/Bio/Nexus 2026-04-30 05:15:47,752 root INFO copying Bio/Nexus/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/Nexus 2026-04-30 05:15:47,752 root INFO copying Bio/Nexus/Nexus.py -> build/lib.linux-loongarch64-cpython-314/Bio/Nexus 2026-04-30 05:15:47,753 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/NMR 2026-04-30 05:15:47,753 root INFO copying Bio/NMR/xpktools.py -> build/lib.linux-loongarch64-cpython-314/Bio/NMR 2026-04-30 05:15:47,753 root INFO copying Bio/NMR/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/NMR 2026-04-30 05:15:47,754 root INFO copying Bio/NMR/NOEtools.py -> build/lib.linux-loongarch64-cpython-314/Bio/NMR 2026-04-30 05:15:47,754 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/Pathway 2026-04-30 05:15:47,754 root INFO copying Bio/Pathway/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/Pathway 2026-04-30 05:15:47,755 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/Pathway/Rep 2026-04-30 05:15:47,755 root INFO copying Bio/Pathway/Rep/MultiGraph.py -> build/lib.linux-loongarch64-cpython-314/Bio/Pathway/Rep 2026-04-30 05:15:47,756 root INFO copying Bio/Pathway/Rep/Graph.py -> build/lib.linux-loongarch64-cpython-314/Bio/Pathway/Rep 2026-04-30 05:15:47,756 root INFO copying Bio/Pathway/Rep/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/Pathway/Rep 2026-04-30 05:15:47,757 root INFO copying Bio/PDB/Chain.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-04-30 05:15:47,757 root INFO copying Bio/PDB/parse_pdb_header.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-04-30 05:15:47,758 root INFO copying Bio/PDB/Structure.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-04-30 05:15:47,758 root INFO copying Bio/PDB/NACCESS.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-04-30 05:15:47,758 root INFO copying Bio/PDB/MMCIFParser.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-04-30 05:15:47,759 root INFO copying Bio/PDB/internal_coords.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-04-30 05:15:47,759 root INFO copying Bio/PDB/StructureAlignment.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-04-30 05:15:47,760 root INFO copying Bio/PDB/Polypeptide.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-04-30 05:15:47,760 root INFO copying Bio/PDB/StructureBuilder.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-04-30 05:15:47,761 root INFO copying Bio/PDB/Selection.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-04-30 05:15:47,761 root INFO copying Bio/PDB/PICIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-04-30 05:15:47,761 root INFO copying Bio/PDB/PDBMLParser.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-04-30 05:15:47,762 root INFO copying Bio/PDB/Dice.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-04-30 05:15:47,762 root INFO copying Bio/PDB/ic_rebuild.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-04-30 05:15:47,763 root INFO copying Bio/PDB/AbstractPropertyMap.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-04-30 05:15:47,763 root INFO copying Bio/PDB/cealign.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-04-30 05:15:47,763 root INFO copying Bio/PDB/DSSP.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-04-30 05:15:47,764 root INFO copying Bio/PDB/alphafold_db.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-04-30 05:15:47,764 root INFO copying Bio/PDB/HSExposure.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-04-30 05:15:47,764 root INFO copying Bio/PDB/PDBIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-04-30 05:15:47,765 root INFO copying Bio/PDB/Residue.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-04-30 05:15:47,765 root INFO copying Bio/PDB/ic_data.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-04-30 05:15:47,766 root INFO copying Bio/PDB/PSEA.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-04-30 05:15:47,766 root INFO copying Bio/PDB/FragmentMapper.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-04-30 05:15:47,766 root INFO copying Bio/PDB/vectors.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-04-30 05:15:47,767 root INFO copying Bio/PDB/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-04-30 05:15:47,767 root INFO copying Bio/PDB/MMCIF2Dict.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-04-30 05:15:47,768 root INFO copying Bio/PDB/mmcifio.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-04-30 05:15:47,768 root INFO copying Bio/PDB/binary_cif.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-04-30 05:15:47,768 root INFO copying Bio/PDB/NeighborSearch.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-04-30 05:15:47,769 root INFO copying Bio/PDB/Atom.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-04-30 05:15:47,769 root INFO copying Bio/PDB/ResidueDepth.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-04-30 05:15:47,770 root INFO copying Bio/PDB/PDBList.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-04-30 05:15:47,770 root INFO copying Bio/PDB/Model.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-04-30 05:15:47,770 root INFO copying Bio/PDB/Entity.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-04-30 05:15:47,771 root INFO copying Bio/PDB/PDBParser.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-04-30 05:15:47,771 root INFO copying Bio/PDB/Superimposer.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-04-30 05:15:47,772 root INFO copying Bio/PDB/qcprot.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-04-30 05:15:47,772 root INFO copying Bio/PDB/SCADIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-04-30 05:15:47,772 root INFO copying Bio/PDB/SASA.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-04-30 05:15:47,773 root INFO copying Bio/PDB/PDBExceptions.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-04-30 05:15:47,773 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/phenotype 2026-04-30 05:15:47,774 root INFO copying Bio/phenotype/phen_micro.py -> build/lib.linux-loongarch64-cpython-314/Bio/phenotype 2026-04-30 05:15:47,774 root INFO copying Bio/phenotype/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/phenotype 2026-04-30 05:15:47,774 root INFO copying Bio/phenotype/pm_fitting.py -> build/lib.linux-loongarch64-cpython-314/Bio/phenotype 2026-04-30 05:15:47,775 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/PopGen 2026-04-30 05:15:47,775 root INFO copying Bio/PopGen/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/PopGen 2026-04-30 05:15:47,776 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/PopGen/GenePop 2026-04-30 05:15:47,776 root INFO copying Bio/PopGen/GenePop/LargeFileParser.py -> build/lib.linux-loongarch64-cpython-314/Bio/PopGen/GenePop 2026-04-30 05:15:47,776 root INFO copying Bio/PopGen/GenePop/FileParser.py -> build/lib.linux-loongarch64-cpython-314/Bio/PopGen/GenePop 2026-04-30 05:15:47,777 root INFO copying Bio/PopGen/GenePop/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/PopGen/GenePop 2026-04-30 05:15:47,777 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/Restriction 2026-04-30 05:15:47,777 root INFO copying Bio/Restriction/PrintFormat.py -> build/lib.linux-loongarch64-cpython-314/Bio/Restriction 2026-04-30 05:15:47,778 root INFO copying Bio/Restriction/Restriction.py -> build/lib.linux-loongarch64-cpython-314/Bio/Restriction 2026-04-30 05:15:47,778 root INFO copying Bio/Restriction/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/Restriction 2026-04-30 05:15:47,779 root INFO copying Bio/Restriction/Restriction_Dictionary.py -> build/lib.linux-loongarch64-cpython-314/Bio/Restriction 2026-04-30 05:15:47,780 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/SCOP 2026-04-30 05:15:47,780 root INFO copying Bio/SCOP/Hie.py -> build/lib.linux-loongarch64-cpython-314/Bio/SCOP 2026-04-30 05:15:47,781 root INFO copying Bio/SCOP/Raf.py -> build/lib.linux-loongarch64-cpython-314/Bio/SCOP 2026-04-30 05:15:47,781 root INFO copying Bio/SCOP/Dom.py -> build/lib.linux-loongarch64-cpython-314/Bio/SCOP 2026-04-30 05:15:47,781 root INFO copying Bio/SCOP/Cla.py -> build/lib.linux-loongarch64-cpython-314/Bio/SCOP 2026-04-30 05:15:47,782 root INFO copying Bio/SCOP/Des.py -> build/lib.linux-loongarch64-cpython-314/Bio/SCOP 2026-04-30 05:15:47,782 root INFO copying Bio/SCOP/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/SCOP 2026-04-30 05:15:47,782 root INFO copying Bio/SCOP/Residues.py -> build/lib.linux-loongarch64-cpython-314/Bio/SCOP 2026-04-30 05:15:47,783 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/SearchIO 2026-04-30 05:15:47,783 root INFO copying Bio/SearchIO/_utils.py -> build/lib.linux-loongarch64-cpython-314/Bio/SearchIO 2026-04-30 05:15:47,784 root INFO copying Bio/SearchIO/_index.py -> build/lib.linux-loongarch64-cpython-314/Bio/SearchIO 2026-04-30 05:15:47,784 root INFO copying Bio/SearchIO/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/SearchIO 2026-04-30 05:15:47,784 root INFO copying Bio/SearchIO/FastaIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/SearchIO 2026-04-30 05:15:47,785 root INFO copying Bio/SearchIO/BlatIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/SearchIO 2026-04-30 05:15:47,785 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/_model 2026-04-30 05:15:47,786 root INFO copying Bio/SearchIO/_model/query.py -> build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/_model 2026-04-30 05:15:47,786 root INFO copying Bio/SearchIO/_model/_base.py -> build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/_model 2026-04-30 05:15:47,786 root INFO copying Bio/SearchIO/_model/hit.py -> build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/_model 2026-04-30 05:15:47,787 root INFO copying Bio/SearchIO/_model/hsp.py -> build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/_model 2026-04-30 05:15:47,787 root INFO copying Bio/SearchIO/_model/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/_model 2026-04-30 05:15:47,788 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/BlastIO 2026-04-30 05:15:47,788 root INFO copying Bio/SearchIO/BlastIO/blast_tab.py -> build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/BlastIO 2026-04-30 05:15:47,788 root INFO copying Bio/SearchIO/BlastIO/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/BlastIO 2026-04-30 05:15:47,789 root INFO copying Bio/SearchIO/BlastIO/blast_xml.py -> build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/BlastIO 2026-04-30 05:15:47,789 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/HHsuiteIO 2026-04-30 05:15:47,790 root INFO copying Bio/SearchIO/HHsuiteIO/hhsuite2_text.py -> build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/HHsuiteIO 2026-04-30 05:15:47,790 root INFO copying Bio/SearchIO/HHsuiteIO/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/HHsuiteIO 2026-04-30 05:15:47,791 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/HmmerIO 2026-04-30 05:15:47,791 root INFO copying Bio/SearchIO/HmmerIO/hmmer3_tab.py -> build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/HmmerIO 2026-04-30 05:15:47,791 root INFO copying Bio/SearchIO/HmmerIO/hmmer3_text.py -> build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/HmmerIO 2026-04-30 05:15:47,792 root INFO copying Bio/SearchIO/HmmerIO/_base.py -> build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/HmmerIO 2026-04-30 05:15:47,792 root INFO copying Bio/SearchIO/HmmerIO/hmmer3_domtab.py -> build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/HmmerIO 2026-04-30 05:15:47,792 root INFO copying Bio/SearchIO/HmmerIO/hmmer2_text.py -> build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/HmmerIO 2026-04-30 05:15:47,793 root INFO copying Bio/SearchIO/HmmerIO/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/HmmerIO 2026-04-30 05:15:47,793 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/InfernalIO 2026-04-30 05:15:47,793 root INFO copying Bio/SearchIO/InfernalIO/_base.py -> build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/InfernalIO 2026-04-30 05:15:47,794 root INFO copying Bio/SearchIO/InfernalIO/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/InfernalIO 2026-04-30 05:15:47,794 root INFO copying Bio/SearchIO/InfernalIO/infernal_tab.py -> build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/InfernalIO 2026-04-30 05:15:47,795 root INFO copying Bio/SearchIO/InfernalIO/infernal_text.py -> build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/InfernalIO 2026-04-30 05:15:47,795 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/ExonerateIO 2026-04-30 05:15:47,795 root INFO copying Bio/SearchIO/ExonerateIO/exonerate_vulgar.py -> build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/ExonerateIO 2026-04-30 05:15:47,796 root INFO copying Bio/SearchIO/ExonerateIO/exonerate_cigar.py -> build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/ExonerateIO 2026-04-30 05:15:47,796 root INFO copying Bio/SearchIO/ExonerateIO/_base.py -> build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/ExonerateIO 2026-04-30 05:15:47,797 root INFO copying Bio/SearchIO/ExonerateIO/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/ExonerateIO 2026-04-30 05:15:47,797 root INFO copying Bio/SearchIO/ExonerateIO/exonerate_text.py -> build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/ExonerateIO 2026-04-30 05:15:47,798 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/InterproscanIO 2026-04-30 05:15:47,798 root INFO copying Bio/SearchIO/InterproscanIO/interproscan_xml.py -> build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/InterproscanIO 2026-04-30 05:15:47,798 root INFO copying Bio/SearchIO/InterproscanIO/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/InterproscanIO 2026-04-30 05:15:47,799 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/SeqIO 2026-04-30 05:15:47,799 root INFO copying Bio/SeqIO/GfaIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/SeqIO 2026-04-30 05:15:47,799 root INFO copying Bio/SeqIO/SeqXmlIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/SeqIO 2026-04-30 05:15:47,800 root INFO copying Bio/SeqIO/AbiIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/SeqIO 2026-04-30 05:15:47,800 root INFO copying Bio/SeqIO/NibIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/SeqIO 2026-04-30 05:15:47,801 root INFO copying Bio/SeqIO/SwissIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/SeqIO 2026-04-30 05:15:47,801 root INFO copying Bio/SeqIO/TabIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/SeqIO 2026-04-30 05:15:47,801 root INFO copying Bio/SeqIO/PirIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/SeqIO 2026-04-30 05:15:47,802 root INFO copying Bio/SeqIO/SffIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/SeqIO 2026-04-30 05:15:47,802 root INFO copying Bio/SeqIO/IgIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/SeqIO 2026-04-30 05:15:47,803 root INFO copying Bio/SeqIO/InsdcIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/SeqIO 2026-04-30 05:15:47,803 root INFO copying Bio/SeqIO/_index.py -> build/lib.linux-loongarch64-cpython-314/Bio/SeqIO 2026-04-30 05:15:47,804 root INFO copying Bio/SeqIO/PdbIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/SeqIO 2026-04-30 05:15:47,804 root INFO copying Bio/SeqIO/UniprotIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/SeqIO 2026-04-30 05:15:47,804 root INFO copying Bio/SeqIO/XdnaIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/SeqIO 2026-04-30 05:15:47,805 root INFO copying Bio/SeqIO/SnapGeneIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/SeqIO 2026-04-30 05:15:47,805 root INFO copying Bio/SeqIO/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/SeqIO 2026-04-30 05:15:47,806 root INFO copying Bio/SeqIO/QualityIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/SeqIO 2026-04-30 05:15:47,806 root INFO copying Bio/SeqIO/GckIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/SeqIO 2026-04-30 05:15:47,806 root INFO copying Bio/SeqIO/PhdIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/SeqIO 2026-04-30 05:15:47,807 root INFO copying Bio/SeqIO/FastaIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/SeqIO 2026-04-30 05:15:47,807 root INFO copying Bio/SeqIO/TwoBitIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/SeqIO 2026-04-30 05:15:47,808 root INFO copying Bio/SeqIO/AceIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/SeqIO 2026-04-30 05:15:47,808 root INFO copying Bio/SeqIO/Interfaces.py -> build/lib.linux-loongarch64-cpython-314/Bio/SeqIO 2026-04-30 05:15:47,809 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/SeqUtils 2026-04-30 05:15:47,809 root INFO copying Bio/SeqUtils/IsoelectricPoint.py -> build/lib.linux-loongarch64-cpython-314/Bio/SeqUtils 2026-04-30 05:15:47,809 root INFO copying Bio/SeqUtils/ProtParam.py -> build/lib.linux-loongarch64-cpython-314/Bio/SeqUtils 2026-04-30 05:15:47,810 root INFO copying Bio/SeqUtils/MeltingTemp.py -> build/lib.linux-loongarch64-cpython-314/Bio/SeqUtils 2026-04-30 05:15:47,810 root INFO copying Bio/SeqUtils/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/SeqUtils 2026-04-30 05:15:47,810 root INFO copying Bio/SeqUtils/CheckSum.py -> build/lib.linux-loongarch64-cpython-314/Bio/SeqUtils 2026-04-30 05:15:47,811 root INFO copying Bio/SeqUtils/lcc.py -> build/lib.linux-loongarch64-cpython-314/Bio/SeqUtils 2026-04-30 05:15:47,811 root INFO copying Bio/SeqUtils/ProtParamData.py -> build/lib.linux-loongarch64-cpython-314/Bio/SeqUtils 2026-04-30 05:15:47,812 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/Sequencing 2026-04-30 05:15:47,812 root INFO copying Bio/Sequencing/Phd.py -> build/lib.linux-loongarch64-cpython-314/Bio/Sequencing 2026-04-30 05:15:47,812 root INFO copying Bio/Sequencing/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/Sequencing 2026-04-30 05:15:47,813 root INFO copying Bio/Sequencing/Ace.py -> build/lib.linux-loongarch64-cpython-314/Bio/Sequencing 2026-04-30 05:15:47,813 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/SVDSuperimposer 2026-04-30 05:15:47,813 root INFO copying Bio/SVDSuperimposer/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/SVDSuperimposer 2026-04-30 05:15:47,814 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/SwissProt 2026-04-30 05:15:47,814 root INFO copying Bio/SwissProt/KeyWList.py -> build/lib.linux-loongarch64-cpython-314/Bio/SwissProt 2026-04-30 05:15:47,815 root INFO copying Bio/SwissProt/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/SwissProt 2026-04-30 05:15:47,815 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/TogoWS 2026-04-30 05:15:47,815 root INFO copying Bio/TogoWS/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/TogoWS 2026-04-30 05:15:47,816 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/Phylo 2026-04-30 05:15:47,816 root INFO copying Bio/Phylo/NewickIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/Phylo 2026-04-30 05:15:47,817 root INFO copying Bio/Phylo/PhyloXML.py -> build/lib.linux-loongarch64-cpython-314/Bio/Phylo 2026-04-30 05:15:47,817 root INFO copying Bio/Phylo/_utils.py -> build/lib.linux-loongarch64-cpython-314/Bio/Phylo 2026-04-30 05:15:47,817 root INFO copying Bio/Phylo/NeXMLIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/Phylo 2026-04-30 05:15:47,818 root INFO copying Bio/Phylo/NeXML.py -> build/lib.linux-loongarch64-cpython-314/Bio/Phylo 2026-04-30 05:15:47,818 root INFO copying Bio/Phylo/Newick.py -> build/lib.linux-loongarch64-cpython-314/Bio/Phylo 2026-04-30 05:15:47,819 root INFO copying Bio/Phylo/BaseTree.py -> build/lib.linux-loongarch64-cpython-314/Bio/Phylo 2026-04-30 05:15:47,819 root INFO copying Bio/Phylo/TreeConstruction.py -> build/lib.linux-loongarch64-cpython-314/Bio/Phylo 2026-04-30 05:15:47,819 root INFO copying Bio/Phylo/PhyloXMLIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/Phylo 2026-04-30 05:15:47,820 root INFO copying Bio/Phylo/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/Phylo 2026-04-30 05:15:47,820 root INFO copying Bio/Phylo/Consensus.py -> build/lib.linux-loongarch64-cpython-314/Bio/Phylo 2026-04-30 05:15:47,821 root INFO copying Bio/Phylo/CDAOIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/Phylo 2026-04-30 05:15:47,821 root INFO copying Bio/Phylo/_cdao_owl.py -> build/lib.linux-loongarch64-cpython-314/Bio/Phylo 2026-04-30 05:15:47,822 root INFO copying Bio/Phylo/CDAO.py -> build/lib.linux-loongarch64-cpython-314/Bio/Phylo 2026-04-30 05:15:47,822 root INFO copying Bio/Phylo/_io.py -> build/lib.linux-loongarch64-cpython-314/Bio/Phylo 2026-04-30 05:15:47,822 root INFO copying Bio/Phylo/NexusIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/Phylo 2026-04-30 05:15:47,823 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/Phylo/PAML 2026-04-30 05:15:47,823 root INFO copying Bio/Phylo/PAML/chi2.py -> build/lib.linux-loongarch64-cpython-314/Bio/Phylo/PAML 2026-04-30 05:15:47,823 root INFO copying Bio/Phylo/PAML/yn00.py -> build/lib.linux-loongarch64-cpython-314/Bio/Phylo/PAML 2026-04-30 05:15:47,824 root INFO copying Bio/Phylo/PAML/codeml.py -> build/lib.linux-loongarch64-cpython-314/Bio/Phylo/PAML 2026-04-30 05:15:47,824 root INFO copying Bio/Phylo/PAML/baseml.py -> build/lib.linux-loongarch64-cpython-314/Bio/Phylo/PAML 2026-04-30 05:15:47,825 root INFO copying Bio/Phylo/PAML/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/Phylo/PAML 2026-04-30 05:15:47,825 root INFO copying Bio/Phylo/PAML/_paml.py -> build/lib.linux-loongarch64-cpython-314/Bio/Phylo/PAML 2026-04-30 05:15:47,825 root INFO copying Bio/Phylo/PAML/_parse_codeml.py -> build/lib.linux-loongarch64-cpython-314/Bio/Phylo/PAML 2026-04-30 05:15:47,826 root INFO copying Bio/Phylo/PAML/_parse_baseml.py -> build/lib.linux-loongarch64-cpython-314/Bio/Phylo/PAML 2026-04-30 05:15:47,826 root INFO copying Bio/Phylo/PAML/_parse_yn00.py -> build/lib.linux-loongarch64-cpython-314/Bio/Phylo/PAML 2026-04-30 05:15:47,827 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/UniGene 2026-04-30 05:15:47,827 root INFO copying Bio/UniGene/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/UniGene 2026-04-30 05:15:47,827 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/UniProt 2026-04-30 05:15:47,828 root INFO copying Bio/UniProt/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/UniProt 2026-04-30 05:15:47,828 root INFO copying Bio/UniProt/GOA.py -> build/lib.linux-loongarch64-cpython-314/Bio/UniProt 2026-04-30 05:15:47,829 root INFO creating build/lib.linux-loongarch64-cpython-314/BioSQL 2026-04-30 05:15:47,829 root INFO copying BioSQL/Loader.py -> build/lib.linux-loongarch64-cpython-314/BioSQL 2026-04-30 05:15:47,829 root INFO copying BioSQL/BioSeqDatabase.py -> build/lib.linux-loongarch64-cpython-314/BioSQL 2026-04-30 05:15:47,830 root INFO copying BioSQL/__init__.py -> build/lib.linux-loongarch64-cpython-314/BioSQL 2026-04-30 05:15:47,830 root INFO copying BioSQL/BioSeq.py -> build/lib.linux-loongarch64-cpython-314/BioSQL 2026-04-30 05:15:47,830 root INFO copying BioSQL/DBUtils.py -> build/lib.linux-loongarch64-cpython-314/BioSQL 2026-04-30 05:15:47,831 root INFO running egg_info 2026-04-30 05:15:47,834 root INFO writing biopython.egg-info/PKG-INFO 2026-04-30 05:15:47,835 root INFO writing dependency_links to biopython.egg-info/dependency_links.txt 2026-04-30 05:15:47,836 root INFO writing requirements to biopython.egg-info/requires.txt 2026-04-30 05:15:47,836 root INFO writing top-level names to biopython.egg-info/top_level.txt 2026-04-30 05:15:47,859 root INFO reading manifest file 'biopython.egg-info/SOURCES.txt' 2026-04-30 05:15:47,916 root INFO reading manifest template 'MANIFEST.in' 2026-04-30 05:15:48,024 root WARNING warning: no previously-included files found matching 'Doc/_build' 2026-04-30 05:15:48,031 root WARNING warning: no previously-included files found matching 'Tests/Gck/DGVC_GCK.zip' 2026-04-30 05:15:48,035 root WARNING warning: no previously-included files matching '*.pyc' found anywhere in distribution 2026-04-30 05:15:48,039 root WARNING warning: no previously-included files matching '*.pyo' found anywhere in distribution 2026-04-30 05:15:48,043 root WARNING warning: no previously-included files matching '*.py{}' found anywhere in distribution 2026-04-30 05:15:48,047 root WARNING warning: no previously-included files matching '*.py-e' found anywhere in distribution 2026-04-30 05:15:48,055 root WARNING warning: no previously-included files found matching 'Bio/Align/substitution_matrices/data/README.txt' 2026-04-30 05:15:48,055 root INFO adding license file 'LICENSE' 2026-04-30 05:15:48,055 root INFO adding license file 'LICENSE.rst' 2026-04-30 05:15:48,099 root INFO writing manifest file 'biopython.egg-info/SOURCES.txt' /usr/lib/python3.14/site-packages/setuptools/command/build_py.py:215: _Warning: Package 'Bio.Align.substitution_matrices' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'Bio.Align.substitution_matrices' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'Bio.Align.substitution_matrices' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'Bio.Align.substitution_matrices' to be distributed and are already explicitly excluding 'Bio.Align.substitution_matrices' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) 2026-04-30 05:15:48,130 root INFO copying Bio/cpairwise2module.c -> build/lib.linux-loongarch64-cpython-314/Bio 2026-04-30 05:15:48,130 root INFO copying Bio/py.typed -> build/lib.linux-loongarch64-cpython-314/Bio 2026-04-30 05:15:48,131 root INFO copying Bio/Align/_aligncore.c -> build/lib.linux-loongarch64-cpython-314/Bio/Align 2026-04-30 05:15:48,131 root INFO copying Bio/Align/_alignmentcounts.c -> build/lib.linux-loongarch64-cpython-314/Bio/Align 2026-04-30 05:15:48,132 root INFO copying Bio/Align/_codonaligner.c -> build/lib.linux-loongarch64-cpython-314/Bio/Align 2026-04-30 05:15:48,132 root INFO copying Bio/Align/_pairwisealigner.c -> build/lib.linux-loongarch64-cpython-314/Bio/Align 2026-04-30 05:15:48,133 root INFO copying Bio/Align/_pairwisealigner.h -> build/lib.linux-loongarch64-cpython-314/Bio/Align 2026-04-30 05:15:48,133 root INFO copying Bio/Align/substitution_matrices/_arraycore.c -> build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices 2026-04-30 05:15:48,134 root INFO copying Bio/Align/substitution_matrices/_arraycore.h -> build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices 2026-04-30 05:15:48,134 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data 2026-04-30 05:15:48,135 root INFO copying Bio/Align/substitution_matrices/data/BENNER22 -> build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data 2026-04-30 05:15:48,135 root INFO copying Bio/Align/substitution_matrices/data/BENNER6 -> build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data 2026-04-30 05:15:48,135 root INFO copying Bio/Align/substitution_matrices/data/BENNER74 -> build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data 2026-04-30 05:15:48,136 root INFO copying Bio/Align/substitution_matrices/data/BLASTN -> build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data 2026-04-30 05:15:48,136 root INFO copying Bio/Align/substitution_matrices/data/BLASTP -> build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data 2026-04-30 05:15:48,137 root INFO copying Bio/Align/substitution_matrices/data/BLOSUM45 -> build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data 2026-04-30 05:15:48,137 root INFO copying Bio/Align/substitution_matrices/data/BLOSUM50 -> build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data 2026-04-30 05:15:48,137 root INFO copying Bio/Align/substitution_matrices/data/BLOSUM62 -> build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data 2026-04-30 05:15:48,138 root INFO copying Bio/Align/substitution_matrices/data/BLOSUM80 -> build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data 2026-04-30 05:15:48,138 root INFO copying Bio/Align/substitution_matrices/data/BLOSUM90 -> build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data 2026-04-30 05:15:48,138 root INFO copying Bio/Align/substitution_matrices/data/DAYHOFF -> build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data 2026-04-30 05:15:48,139 root INFO copying Bio/Align/substitution_matrices/data/FENG -> build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data 2026-04-30 05:15:48,139 root INFO copying Bio/Align/substitution_matrices/data/GENETIC -> build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data 2026-04-30 05:15:48,140 root INFO copying Bio/Align/substitution_matrices/data/GONNET1992 -> build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data 2026-04-30 05:15:48,140 root INFO copying Bio/Align/substitution_matrices/data/HOXD70 -> build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data 2026-04-30 05:15:48,140 root INFO copying Bio/Align/substitution_matrices/data/JOHNSON -> build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data 2026-04-30 05:15:48,141 root INFO copying Bio/Align/substitution_matrices/data/JONES -> build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data 2026-04-30 05:15:48,141 root INFO copying Bio/Align/substitution_matrices/data/LEVIN -> build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data 2026-04-30 05:15:48,142 root INFO copying Bio/Align/substitution_matrices/data/MCLACHLAN -> build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data 2026-04-30 05:15:48,142 root INFO copying Bio/Align/substitution_matrices/data/MDM78 -> build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data 2026-04-30 05:15:48,142 root INFO copying Bio/Align/substitution_matrices/data/MEGABLAST -> build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data 2026-04-30 05:15:48,143 root INFO copying Bio/Align/substitution_matrices/data/NUC.4.4 -> build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data 2026-04-30 05:15:48,143 root INFO copying Bio/Align/substitution_matrices/data/PAM250 -> build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data 2026-04-30 05:15:48,144 root INFO copying Bio/Align/substitution_matrices/data/PAM30 -> build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data 2026-04-30 05:15:48,144 root INFO copying Bio/Align/substitution_matrices/data/PAM70 -> build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data 2026-04-30 05:15:48,144 root INFO copying Bio/Align/substitution_matrices/data/RAO -> build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data 2026-04-30 05:15:48,145 root INFO copying Bio/Align/substitution_matrices/data/RISLER -> build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data 2026-04-30 05:15:48,145 root INFO copying Bio/Align/substitution_matrices/data/SCHNEIDER -> build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data 2026-04-30 05:15:48,146 root INFO copying Bio/Align/substitution_matrices/data/STR -> build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data 2026-04-30 05:15:48,146 root INFO copying Bio/Align/substitution_matrices/data/TRANS -> build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data 2026-04-30 05:15:48,146 root INFO copying Bio/Cluster/cluster.c -> build/lib.linux-loongarch64-cpython-314/Bio/Cluster 2026-04-30 05:15:48,147 root INFO copying Bio/Cluster/cluster.h -> build/lib.linux-loongarch64-cpython-314/Bio/Cluster 2026-04-30 05:15:48,147 root INFO copying Bio/Cluster/clustermodule.c -> build/lib.linux-loongarch64-cpython-314/Bio/Cluster 2026-04-30 05:15:48,148 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,148 root INFO copying Bio/Entrez/DTDs/BITS-embedded-index2.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,149 root INFO copying Bio/Entrez/DTDs/BITS-question-answer2.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,149 root INFO copying Bio/Entrez/DTDs/Docsum_3_0.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,149 root INFO copying Bio/Entrez/DTDs/Docsum_3_0.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,150 root INFO copying Bio/Entrez/DTDs/Docsum_3_1.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,150 root INFO copying Bio/Entrez/DTDs/Docsum_3_1.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,151 root INFO copying Bio/Entrez/DTDs/Docsum_3_2.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,151 root INFO copying Bio/Entrez/DTDs/Docsum_3_2.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,151 root INFO copying Bio/Entrez/DTDs/Docsum_3_3.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,152 root INFO copying Bio/Entrez/DTDs/Docsum_3_3.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,152 root INFO copying Bio/Entrez/DTDs/Docsum_3_4.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,153 root INFO copying Bio/Entrez/DTDs/Docsum_3_4.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,153 root INFO copying Bio/Entrez/DTDs/EMBL_General.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,154 root INFO copying Bio/Entrez/DTDs/EMBL_General.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,154 root INFO copying Bio/Entrez/DTDs/GenBank_General.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,154 root INFO copying Bio/Entrez/DTDs/GenBank_General.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,155 root INFO copying Bio/Entrez/DTDs/HomoloGene.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,155 root INFO copying Bio/Entrez/DTDs/HomoloGene.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,156 root INFO copying Bio/Entrez/DTDs/INSD_INSDSeq.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,156 root INFO copying Bio/Entrez/DTDs/INSD_INSDSeq.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,156 root INFO copying Bio/Entrez/DTDs/JATS-XHTMLtablesetup1-3.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,157 root INFO copying Bio/Entrez/DTDs/JATS-ali-namespace1-3.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,157 root INFO copying Bio/Entrez/DTDs/JATS-archivearticle1-3-mathml3.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,158 root INFO copying Bio/Entrez/DTDs/JATS-archivecustom-classes1-3.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,158 root INFO copying Bio/Entrez/DTDs/JATS-archivecustom-mixes1-3.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,158 root INFO copying Bio/Entrez/DTDs/JATS-archivecustom-models1-3.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,159 root INFO copying Bio/Entrez/DTDs/JATS-archivecustom-modules1-3.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,159 root INFO copying Bio/Entrez/DTDs/JATS-articlemeta1-3.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,160 root INFO copying Bio/Entrez/DTDs/JATS-backmatter1-3.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,160 root INFO copying Bio/Entrez/DTDs/JATS-chars1-3.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,161 root INFO copying Bio/Entrez/DTDs/JATS-common-atts1-3.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,161 root INFO copying Bio/Entrez/DTDs/JATS-common1-3.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,162 root INFO copying Bio/Entrez/DTDs/JATS-default-classes1-3.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,163 root INFO copying Bio/Entrez/DTDs/JATS-default-mixes1-3.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,163 root INFO copying Bio/Entrez/DTDs/JATS-display1-3.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,163 root INFO copying Bio/Entrez/DTDs/JATS-format1-3.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,164 root INFO copying Bio/Entrez/DTDs/JATS-funding1-3.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,164 root INFO copying Bio/Entrez/DTDs/JATS-journalmeta1-3.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,165 root INFO copying Bio/Entrez/DTDs/JATS-link1-3.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,165 root INFO copying Bio/Entrez/DTDs/JATS-list1-3.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,166 root INFO copying Bio/Entrez/DTDs/JATS-math1-3.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,166 root INFO copying Bio/Entrez/DTDs/JATS-mathml3-mathmlsetup1-3.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,167 root INFO copying Bio/Entrez/DTDs/JATS-mathml3-modules1-3.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,167 root INFO copying Bio/Entrez/DTDs/JATS-modules1-3.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,167 root INFO copying Bio/Entrez/DTDs/JATS-nlmcitation1-3.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,168 root INFO copying Bio/Entrez/DTDs/JATS-notat1-3.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,168 root INFO copying Bio/Entrez/DTDs/JATS-para1-3.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,169 root INFO copying Bio/Entrez/DTDs/JATS-phrase1-3.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,169 root INFO copying Bio/Entrez/DTDs/JATS-references1-3.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,170 root INFO copying Bio/Entrez/DTDs/JATS-related-object1-3.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,170 root INFO copying Bio/Entrez/DTDs/JATS-section1-3.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,171 root INFO copying Bio/Entrez/DTDs/JATS-xmlspecchars1-3.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,171 root INFO copying Bio/Entrez/DTDs/MMDB.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,171 root INFO copying Bio/Entrez/DTDs/MMDB.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,172 root INFO copying Bio/Entrez/DTDs/MMDB_Chemical_graph.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,172 root INFO copying Bio/Entrez/DTDs/MMDB_Chemical_graph.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,173 root INFO copying Bio/Entrez/DTDs/MMDB_Features.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,173 root INFO copying Bio/Entrez/DTDs/MMDB_Features.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,173 root INFO copying Bio/Entrez/DTDs/MMDB_Structural_model.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,174 root INFO copying Bio/Entrez/DTDs/MMDB_Structural_model.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,174 root INFO copying Bio/Entrez/DTDs/NCBI_Access.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,175 root INFO copying Bio/Entrez/DTDs/NCBI_Access.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,175 root INFO copying Bio/Entrez/DTDs/NCBI_Biblio.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,175 root INFO copying Bio/Entrez/DTDs/NCBI_Biblio.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,176 root INFO copying Bio/Entrez/DTDs/NCBI_BioSource.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,176 root INFO copying Bio/Entrez/DTDs/NCBI_BioSource.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,177 root INFO copying Bio/Entrez/DTDs/NCBI_BioTree.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,177 root INFO copying Bio/Entrez/DTDs/NCBI_BioTree.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,177 root INFO copying Bio/Entrez/DTDs/NCBI_Blast4.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,178 root INFO copying Bio/Entrez/DTDs/NCBI_Blast4.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,178 root INFO copying Bio/Entrez/DTDs/NCBI_BlastDL.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,179 root INFO copying Bio/Entrez/DTDs/NCBI_BlastDL.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,179 root INFO copying Bio/Entrez/DTDs/NCBI_BlastOutput.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,179 root INFO copying Bio/Entrez/DTDs/NCBI_BlastOutput.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,180 root INFO copying Bio/Entrez/DTDs/NCBI_Cdd.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,180 root INFO copying Bio/Entrez/DTDs/NCBI_Cdd.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,181 root INFO copying Bio/Entrez/DTDs/NCBI_Cn3d.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,181 root INFO copying Bio/Entrez/DTDs/NCBI_Cn3d.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,181 root INFO copying Bio/Entrez/DTDs/NCBI_Entity.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,182 root INFO copying Bio/Entrez/DTDs/NCBI_Entrez2.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,182 root INFO copying Bio/Entrez/DTDs/NCBI_Entrez2.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,183 root INFO copying Bio/Entrez/DTDs/NCBI_Entrezgene.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,183 root INFO copying Bio/Entrez/DTDs/NCBI_Entrezgene.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,183 root INFO copying Bio/Entrez/DTDs/NCBI_FeatDef.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,184 root INFO copying Bio/Entrez/DTDs/NCBI_FeatDef.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,184 root INFO copying Bio/Entrez/DTDs/NCBI_GBSeq.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,185 root INFO copying Bio/Entrez/DTDs/NCBI_GBSeq.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,185 root INFO copying Bio/Entrez/DTDs/NCBI_Gene.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,185 root INFO copying Bio/Entrez/DTDs/NCBI_Gene.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,186 root INFO copying Bio/Entrez/DTDs/NCBI_General.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,186 root INFO copying Bio/Entrez/DTDs/NCBI_General.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,187 root INFO copying Bio/Entrez/DTDs/NCBI_ID1Access.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,187 root INFO copying Bio/Entrez/DTDs/NCBI_ID1Access.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,187 root INFO copying Bio/Entrez/DTDs/NCBI_ID2Access.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,188 root INFO copying Bio/Entrez/DTDs/NCBI_ID2Access.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,188 root INFO copying Bio/Entrez/DTDs/NCBI_MedArchive.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,189 root INFO copying Bio/Entrez/DTDs/NCBI_MedArchive.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,189 root INFO copying Bio/Entrez/DTDs/NCBI_Medlars.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,189 root INFO copying Bio/Entrez/DTDs/NCBI_Medlars.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,190 root INFO copying Bio/Entrez/DTDs/NCBI_Medline.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,190 root INFO copying Bio/Entrez/DTDs/NCBI_Medline.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,191 root INFO copying Bio/Entrez/DTDs/NCBI_Mim.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,191 root INFO copying Bio/Entrez/DTDs/NCBI_Mim.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,191 root INFO copying Bio/Entrez/DTDs/NCBI_Mime.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,192 root INFO copying Bio/Entrez/DTDs/NCBI_Mime.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,192 root INFO copying Bio/Entrez/DTDs/NCBI_ObjPrt.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,193 root INFO copying Bio/Entrez/DTDs/NCBI_ObjPrt.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,193 root INFO copying Bio/Entrez/DTDs/NCBI_Organism.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,193 root INFO copying Bio/Entrez/DTDs/NCBI_Organism.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,194 root INFO copying Bio/Entrez/DTDs/NCBI_PCAssay.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,194 root INFO copying Bio/Entrez/DTDs/NCBI_PCAssay.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,195 root INFO copying Bio/Entrez/DTDs/NCBI_PCSubstance.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,195 root INFO copying Bio/Entrez/DTDs/NCBI_PCSubstance.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,195 root INFO copying Bio/Entrez/DTDs/NCBI_Project.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,196 root INFO copying Bio/Entrez/DTDs/NCBI_Project.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,196 root INFO copying Bio/Entrez/DTDs/NCBI_Protein.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,197 root INFO copying Bio/Entrez/DTDs/NCBI_Protein.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,197 root INFO copying Bio/Entrez/DTDs/NCBI_Pub.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,197 root INFO copying Bio/Entrez/DTDs/NCBI_Pub.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,198 root INFO copying Bio/Entrez/DTDs/NCBI_PubMed.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,198 root INFO copying Bio/Entrez/DTDs/NCBI_PubMed.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,199 root INFO copying Bio/Entrez/DTDs/NCBI_RNA.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,199 root INFO copying Bio/Entrez/DTDs/NCBI_RNA.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,199 root INFO copying Bio/Entrez/DTDs/NCBI_Remap.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,200 root INFO copying Bio/Entrez/DTDs/NCBI_Remap.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,200 root INFO copying Bio/Entrez/DTDs/NCBI_Rsite.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,201 root INFO copying Bio/Entrez/DTDs/NCBI_Rsite.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,201 root INFO copying Bio/Entrez/DTDs/NCBI_ScoreMat.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,201 root INFO copying Bio/Entrez/DTDs/NCBI_ScoreMat.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,202 root INFO copying Bio/Entrez/DTDs/NCBI_SeqCode.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,202 root INFO copying Bio/Entrez/DTDs/NCBI_SeqCode.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,203 root INFO copying Bio/Entrez/DTDs/NCBI_SeqTable.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,203 root INFO copying Bio/Entrez/DTDs/NCBI_SeqTable.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,203 root INFO copying Bio/Entrez/DTDs/NCBI_Seq_split.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,204 root INFO copying Bio/Entrez/DTDs/NCBI_Seq_split.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,204 root INFO copying Bio/Entrez/DTDs/NCBI_Seqalign.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,205 root INFO copying Bio/Entrez/DTDs/NCBI_Seqalign.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,205 root INFO copying Bio/Entrez/DTDs/NCBI_Seqfeat.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,205 root INFO copying Bio/Entrez/DTDs/NCBI_Seqfeat.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,206 root INFO copying Bio/Entrez/DTDs/NCBI_Seqloc.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,206 root INFO copying Bio/Entrez/DTDs/NCBI_Seqloc.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,207 root INFO copying Bio/Entrez/DTDs/NCBI_Seqres.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,207 root INFO copying Bio/Entrez/DTDs/NCBI_Seqres.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,207 root INFO copying Bio/Entrez/DTDs/NCBI_Seqset.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,208 root INFO copying Bio/Entrez/DTDs/NCBI_Seqset.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,208 root INFO copying Bio/Entrez/DTDs/NCBI_Sequence.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,209 root INFO copying Bio/Entrez/DTDs/NCBI_Sequence.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,209 root INFO copying Bio/Entrez/DTDs/NCBI_Submit.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,210 root INFO copying Bio/Entrez/DTDs/NCBI_Submit.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,210 root INFO copying Bio/Entrez/DTDs/NCBI_Systems.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,210 root INFO copying Bio/Entrez/DTDs/NCBI_TSeq.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,211 root INFO copying Bio/Entrez/DTDs/NCBI_TSeq.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,211 root INFO copying Bio/Entrez/DTDs/NCBI_TxInit.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,211 root INFO copying Bio/Entrez/DTDs/NCBI_TxInit.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,212 root INFO copying Bio/Entrez/DTDs/NCBI_Variation.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,212 root INFO copying Bio/Entrez/DTDs/NCBI_Variation.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,213 root INFO copying Bio/Entrez/DTDs/NCBI_all.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,213 root INFO copying Bio/Entrez/DTDs/NSE.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,213 root INFO copying Bio/Entrez/DTDs/NSE.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,214 root INFO copying Bio/Entrez/DTDs/OMSSA.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,214 root INFO copying Bio/Entrez/DTDs/OMSSA.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,215 root INFO copying Bio/Entrez/DTDs/PDB_General.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,215 root INFO copying Bio/Entrez/DTDs/PDB_General.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,216 root INFO copying Bio/Entrez/DTDs/PIR_General.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,216 root INFO copying Bio/Entrez/DTDs/PIR_General.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,216 root INFO copying Bio/Entrez/DTDs/PRF_General.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,217 root INFO copying Bio/Entrez/DTDs/PRF_General.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,217 root INFO copying Bio/Entrez/DTDs/SP_General.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,218 root INFO copying Bio/Entrez/DTDs/SP_General.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,218 root INFO copying Bio/Entrez/DTDs/XHTMLtablesetup.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,218 root INFO copying Bio/Entrez/DTDs/archivearticle.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,219 root INFO copying Bio/Entrez/DTDs/archivecustom-classes.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,219 root INFO copying Bio/Entrez/DTDs/archivecustom-mixes.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,220 root INFO copying Bio/Entrez/DTDs/archivecustom-models.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,220 root INFO copying Bio/Entrez/DTDs/archivecustom-modules.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,221 root INFO copying Bio/Entrez/DTDs/articlemeta.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,221 root INFO copying Bio/Entrez/DTDs/backmatter.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,222 root INFO copying Bio/Entrez/DTDs/bookdoc_100301.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,222 root INFO copying Bio/Entrez/DTDs/bookdoc_110101.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,222 root INFO copying Bio/Entrez/DTDs/bookdoc_120101.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,223 root INFO copying Bio/Entrez/DTDs/bookdoc_130101.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,223 root INFO copying Bio/Entrez/DTDs/bookdoc_140101.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,223 root INFO copying Bio/Entrez/DTDs/bookdoc_150101.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,224 root INFO copying Bio/Entrez/DTDs/chars.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,224 root INFO copying Bio/Entrez/DTDs/common.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 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Bio/Entrez/DTDs/eSearch_020511.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,228 root INFO copying Bio/Entrez/DTDs/eSpell.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,229 root INFO copying Bio/Entrez/DTDs/eSummary_041029.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,229 root INFO copying Bio/Entrez/DTDs/egquery.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,230 root INFO copying Bio/Entrez/DTDs/einfo.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,230 root INFO copying Bio/Entrez/DTDs/elink.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,230 root INFO copying Bio/Entrez/DTDs/elink_020122.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,231 root INFO copying Bio/Entrez/DTDs/epost.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,231 root INFO copying Bio/Entrez/DTDs/esearch.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,232 root INFO copying Bio/Entrez/DTDs/esummary-v1.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,232 root INFO copying Bio/Entrez/DTDs/esummary_clinvar.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,232 root INFO copying Bio/Entrez/DTDs/esummary_gene.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,233 root INFO copying Bio/Entrez/DTDs/format.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,233 root INFO copying Bio/Entrez/DTDs/htmltable.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,234 root INFO copying Bio/Entrez/DTDs/isoamsa.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,234 root INFO copying Bio/Entrez/DTDs/isoamsb.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,234 root INFO copying Bio/Entrez/DTDs/isoamsc.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,235 root INFO copying Bio/Entrez/DTDs/isoamsn.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,235 root INFO copying Bio/Entrez/DTDs/isoamso.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,236 root INFO copying Bio/Entrez/DTDs/isoamsr.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,236 root INFO copying Bio/Entrez/DTDs/isobox.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,236 root INFO copying Bio/Entrez/DTDs/isocyr1.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,237 root INFO copying Bio/Entrez/DTDs/isocyr2.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,237 root INFO copying Bio/Entrez/DTDs/isodia.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,238 root INFO copying Bio/Entrez/DTDs/isogrk1.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,238 root INFO copying Bio/Entrez/DTDs/isogrk2.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,238 root INFO copying Bio/Entrez/DTDs/isogrk3.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,239 root INFO copying Bio/Entrez/DTDs/isogrk4.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,239 root INFO copying Bio/Entrez/DTDs/isolat1.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,240 root INFO copying Bio/Entrez/DTDs/isolat2.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,240 root INFO copying Bio/Entrez/DTDs/isomfrk.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,240 root INFO copying Bio/Entrez/DTDs/isomopf.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,241 root INFO copying Bio/Entrez/DTDs/isomscr.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,241 root INFO copying Bio/Entrez/DTDs/isonum.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,242 root INFO copying Bio/Entrez/DTDs/isopub.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,242 root INFO copying Bio/Entrez/DTDs/isotech.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,242 root INFO copying Bio/Entrez/DTDs/journalmeta.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,243 root INFO copying Bio/Entrez/DTDs/link.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,243 root INFO copying Bio/Entrez/DTDs/list.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,244 root INFO copying Bio/Entrez/DTDs/math.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,244 root INFO copying Bio/Entrez/DTDs/mathml-in-pubmed.mod -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,245 root INFO copying Bio/Entrez/DTDs/mathml2-qname-1.mod -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,245 root INFO copying Bio/Entrez/DTDs/mathml2.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,245 root INFO copying Bio/Entrez/DTDs/mathml3-qname1.mod -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,246 root INFO copying Bio/Entrez/DTDs/mathml3.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,246 root INFO copying Bio/Entrez/DTDs/mathmlsetup.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,247 root INFO copying Bio/Entrez/DTDs/mmlalias.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,247 root INFO copying Bio/Entrez/DTDs/mmlextra.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,248 root INFO copying Bio/Entrez/DTDs/modules.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,248 root INFO copying Bio/Entrez/DTDs/nlm-articleset-2.0.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,248 root INFO copying Bio/Entrez/DTDs/nlmcatalogrecordset_170601.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,249 root INFO copying Bio/Entrez/DTDs/nlmcommon_011101.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,249 root INFO copying Bio/Entrez/DTDs/nlmcommon_080101.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,250 root INFO copying Bio/Entrez/DTDs/nlmcommon_090101.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,250 root INFO copying Bio/Entrez/DTDs/nlmmedline_011101.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,250 root INFO copying Bio/Entrez/DTDs/nlmmedline_080101.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,251 root INFO copying Bio/Entrez/DTDs/nlmmedline_090101.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,251 root INFO copying Bio/Entrez/DTDs/nlmmedlinecitation_011101.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,252 root INFO copying Bio/Entrez/DTDs/nlmmedlinecitation_080101.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,252 root INFO copying Bio/Entrez/DTDs/nlmmedlinecitation_090101.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,252 root INFO copying Bio/Entrez/DTDs/nlmmedlinecitationset_100101.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,253 root INFO copying Bio/Entrez/DTDs/nlmmedlinecitationset_100301.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,253 root INFO copying Bio/Entrez/DTDs/nlmmedlinecitationset_110101.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,254 root INFO copying Bio/Entrez/DTDs/nlmmedlinecitationset_120101.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,254 root INFO copying Bio/Entrez/DTDs/nlmmedlinecitationset_130101.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,254 root INFO copying Bio/Entrez/DTDs/nlmmedlinecitationset_130501.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,255 root INFO copying Bio/Entrez/DTDs/nlmmedlinecitationset_140101.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,255 root INFO copying Bio/Entrez/DTDs/nlmmedlinecitationset_150101.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,256 root INFO copying Bio/Entrez/DTDs/nlmserials_080101.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,256 root INFO copying Bio/Entrez/DTDs/nlmserials_100101.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,257 root INFO copying Bio/Entrez/DTDs/nlmsharedcatcit_080101.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,257 root INFO copying Bio/Entrez/DTDs/nlmsharedcatcit_090101.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,257 root INFO copying Bio/Entrez/DTDs/notat.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,258 root INFO copying Bio/Entrez/DTDs/para.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,258 root INFO copying Bio/Entrez/DTDs/phrase.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,259 root INFO copying Bio/Entrez/DTDs/pmc-1.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,259 root INFO copying Bio/Entrez/DTDs/pubmed_020114.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,259 root INFO copying Bio/Entrez/DTDs/pubmed_080101.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,260 root INFO copying Bio/Entrez/DTDs/pubmed_090101.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,260 root INFO copying Bio/Entrez/DTDs/pubmed_100101.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,261 root INFO copying Bio/Entrez/DTDs/pubmed_100301.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,261 root INFO copying Bio/Entrez/DTDs/pubmed_110101.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,261 root INFO copying Bio/Entrez/DTDs/pubmed_120101.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,262 root INFO copying Bio/Entrez/DTDs/pubmed_130101.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,262 root INFO copying Bio/Entrez/DTDs/pubmed_130501.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,263 root INFO copying Bio/Entrez/DTDs/pubmed_140101.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,263 root INFO copying Bio/Entrez/DTDs/pubmed_150101.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,263 root INFO copying Bio/Entrez/DTDs/pubmed_180101.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,264 root INFO copying Bio/Entrez/DTDs/pubmed_180601.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,264 root INFO copying Bio/Entrez/DTDs/pubmed_190101.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,265 root INFO copying Bio/Entrez/DTDs/references.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,265 root INFO copying Bio/Entrez/DTDs/section.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,265 root INFO copying Bio/Entrez/DTDs/taxon.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,266 root INFO copying Bio/Entrez/DTDs/xhtml-inlstyle-1.mod -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,266 root INFO copying Bio/Entrez/DTDs/xhtml-table-1.mod -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,267 root INFO copying Bio/Entrez/DTDs/xmlspecchars.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-04-30 05:15:48,267 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/Entrez/XSDs 2026-04-30 05:15:48,267 root INFO copying Bio/Entrez/XSDs/IPGReportSet.xsd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/XSDs 2026-04-30 05:15:48,268 root INFO copying Bio/Entrez/XSDs/NCBI_BlastOutput2.mod.xsd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/XSDs 2026-04-30 05:15:48,268 root INFO copying Bio/Entrez/XSDs/NCBI_BlastOutput2.xsd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/XSDs 2026-04-30 05:15:48,269 root INFO copying Bio/motifs/_pwm.c -> build/lib.linux-loongarch64-cpython-314/Bio/motifs 2026-04-30 05:15:48,269 root INFO copying Bio/Nexus/cnexus.c -> build/lib.linux-loongarch64-cpython-314/Bio/Nexus 2026-04-30 05:15:48,269 root INFO copying Bio/PDB/bcifhelpermodule.c -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-04-30 05:15:48,270 root INFO copying Bio/PDB/ccealignmodule.c -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-04-30 05:15:48,270 root INFO copying Bio/PDB/kdtrees.c -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-04-30 05:15:48,271 root INFO copying Bio/SeqIO/_twoBitIO.c -> build/lib.linux-loongarch64-cpython-314/Bio/SeqIO 2026-04-30 05:15:48,271 root INFO copying BioSQL/py.typed -> build/lib.linux-loongarch64-cpython-314/BioSQL 2026-04-30 05:15:48,279 root INFO running build_ext 2026-04-30 05:15:48,282 root INFO building 'Bio.Align._aligncore' extension 2026-04-30 05:15:48,283 root INFO creating build/temp.linux-loongarch64-cpython-314/Bio/Align 2026-04-30 05:15:48,283 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.14 -c Bio/Align/_aligncore.c -o build/temp.linux-loongarch64-cpython-314/Bio/Align/_aligncore.o 2026-04-30 05:15:48,665 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Wl,-z,pack-relative-relocs -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-loongarch64-cpython-314/Bio/Align/_aligncore.o -L/usr/lib -o build/lib.linux-loongarch64-cpython-314/Bio/Align/_aligncore.cpython-314-loongarch64-linux-musl.so 2026-04-30 05:15:48,682 root INFO building 'Bio.Align._alignmentcounts' extension 2026-04-30 05:15:48,682 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.14 -c Bio/Align/_alignmentcounts.c -o build/temp.linux-loongarch64-cpython-314/Bio/Align/_alignmentcounts.o 2026-04-30 05:15:49,866 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Wl,-z,pack-relative-relocs -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-loongarch64-cpython-314/Bio/Align/_alignmentcounts.o -L/usr/lib -o build/lib.linux-loongarch64-cpython-314/Bio/Align/_alignmentcounts.cpython-314-loongarch64-linux-musl.so 2026-04-30 05:15:49,883 root INFO building 'Bio.Align._codonaligner' extension 2026-04-30 05:15:49,884 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.14 -c Bio/Align/_codonaligner.c -o build/temp.linux-loongarch64-cpython-314/Bio/Align/_codonaligner.o 2026-04-30 05:15:50,721 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Wl,-z,pack-relative-relocs -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-loongarch64-cpython-314/Bio/Align/_codonaligner.o -L/usr/lib -o build/lib.linux-loongarch64-cpython-314/Bio/Align/_codonaligner.cpython-314-loongarch64-linux-musl.so 2026-04-30 05:15:50,737 root INFO building 'Bio.Align._pairwisealigner' extension 2026-04-30 05:15:50,737 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.14 -c Bio/Align/_pairwisealigner.c -o build/temp.linux-loongarch64-cpython-314/Bio/Align/_pairwisealigner.o 2026-04-30 05:16:00,813 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Wl,-z,pack-relative-relocs -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-loongarch64-cpython-314/Bio/Align/_pairwisealigner.o -L/usr/lib -o build/lib.linux-loongarch64-cpython-314/Bio/Align/_pairwisealigner.cpython-314-loongarch64-linux-musl.so 2026-04-30 05:16:00,835 root INFO building 'Bio.Align.substitution_matrices._arraycore' extension 2026-04-30 05:16:00,836 root INFO creating build/temp.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices 2026-04-30 05:16:00,836 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.14 -c Bio/Align//substitution_matrices/_arraycore.c -o build/temp.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/_arraycore.o 2026-04-30 05:16:01,141 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Wl,-z,pack-relative-relocs -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/_arraycore.o -L/usr/lib -o build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/_arraycore.cpython-314-loongarch64-linux-musl.so 2026-04-30 05:16:01,156 root INFO building 'Bio.cpairwise2' extension 2026-04-30 05:16:01,157 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.14 -c Bio/cpairwise2module.c -o build/temp.linux-loongarch64-cpython-314/Bio/cpairwise2module.o 2026-04-30 05:16:01,617 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Wl,-z,pack-relative-relocs -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-loongarch64-cpython-314/Bio/cpairwise2module.o -L/usr/lib -o build/lib.linux-loongarch64-cpython-314/Bio/cpairwise2.cpython-314-loongarch64-linux-musl.so 2026-04-30 05:16:01,632 root INFO building 'Bio.Nexus.cnexus' extension 2026-04-30 05:16:01,632 root INFO creating build/temp.linux-loongarch64-cpython-314/Bio/Nexus 2026-04-30 05:16:01,632 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.14 -c Bio/Nexus/cnexus.c -o build/temp.linux-loongarch64-cpython-314/Bio/Nexus/cnexus.o 2026-04-30 05:16:01,826 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Wl,-z,pack-relative-relocs -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-loongarch64-cpython-314/Bio/Nexus/cnexus.o -L/usr/lib -o build/lib.linux-loongarch64-cpython-314/Bio/Nexus/cnexus.cpython-314-loongarch64-linux-musl.so 2026-04-30 05:16:01,840 root INFO building 'Bio.motifs._pwm' extension 2026-04-30 05:16:01,840 root INFO creating build/temp.linux-loongarch64-cpython-314/Bio/motifs 2026-04-30 05:16:01,841 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.14 -c Bio/motifs/_pwm.c -o build/temp.linux-loongarch64-cpython-314/Bio/motifs/_pwm.o 2026-04-30 05:16:02,069 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Wl,-z,pack-relative-relocs -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-loongarch64-cpython-314/Bio/motifs/_pwm.o -L/usr/lib -o build/lib.linux-loongarch64-cpython-314/Bio/motifs/_pwm.cpython-314-loongarch64-linux-musl.so 2026-04-30 05:16:02,083 root INFO building 'Bio.Cluster._cluster' extension 2026-04-30 05:16:02,083 root INFO creating build/temp.linux-loongarch64-cpython-314/Bio/Cluster 2026-04-30 05:16:02,084 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.14 -c Bio/Cluster/cluster.c -o build/temp.linux-loongarch64-cpython-314/Bio/Cluster/cluster.o -DCLUSTER_USE_PYTHON_MEMORY 2026-04-30 05:16:05,289 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.14 -c Bio/Cluster/clustermodule.c -o build/temp.linux-loongarch64-cpython-314/Bio/Cluster/clustermodule.o -DCLUSTER_USE_PYTHON_MEMORY 2026-04-30 05:16:06,372 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Wl,-z,pack-relative-relocs -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-loongarch64-cpython-314/Bio/Cluster/cluster.o build/temp.linux-loongarch64-cpython-314/Bio/Cluster/clustermodule.o -L/usr/lib -o build/lib.linux-loongarch64-cpython-314/Bio/Cluster/_cluster.cpython-314-loongarch64-linux-musl.so 2026-04-30 05:16:06,391 root INFO building 'Bio.PDB.ccealign' extension 2026-04-30 05:16:06,392 root INFO creating build/temp.linux-loongarch64-cpython-314/Bio/PDB 2026-04-30 05:16:06,392 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.14 -c Bio/PDB/ccealignmodule.c -o build/temp.linux-loongarch64-cpython-314/Bio/PDB/ccealignmodule.o 2026-04-30 05:16:06,901 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Wl,-z,pack-relative-relocs -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-loongarch64-cpython-314/Bio/PDB/ccealignmodule.o -L/usr/lib -o build/lib.linux-loongarch64-cpython-314/Bio/PDB/ccealign.cpython-314-loongarch64-linux-musl.so 2026-04-30 05:16:06,916 root INFO building 'Bio.PDB.kdtrees' extension 2026-04-30 05:16:06,917 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.14 -c Bio/PDB/kdtrees.c -o build/temp.linux-loongarch64-cpython-314/Bio/PDB/kdtrees.o 2026-04-30 05:16:07,581 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Wl,-z,pack-relative-relocs -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-loongarch64-cpython-314/Bio/PDB/kdtrees.o -L/usr/lib -o build/lib.linux-loongarch64-cpython-314/Bio/PDB/kdtrees.cpython-314-loongarch64-linux-musl.so 2026-04-30 05:16:07,597 root INFO building 'Bio.PDB._bcif_helper' extension 2026-04-30 05:16:07,598 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.14 -c Bio/PDB/bcifhelpermodule.c -o build/temp.linux-loongarch64-cpython-314/Bio/PDB/bcifhelpermodule.o 2026-04-30 05:16:07,831 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Wl,-z,pack-relative-relocs -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-loongarch64-cpython-314/Bio/PDB/bcifhelpermodule.o -L/usr/lib -o build/lib.linux-loongarch64-cpython-314/Bio/PDB/_bcif_helper.cpython-314-loongarch64-linux-musl.so 2026-04-30 05:16:07,846 root INFO building 'Bio.SeqIO._twoBitIO' extension 2026-04-30 05:16:07,846 root INFO creating build/temp.linux-loongarch64-cpython-314/Bio/SeqIO 2026-04-30 05:16:07,846 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.14 -c Bio/SeqIO/_twoBitIO.c -o build/temp.linux-loongarch64-cpython-314/Bio/SeqIO/_twoBitIO.o 2026-04-30 05:16:08,144 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Wl,-z,pack-relative-relocs -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-loongarch64-cpython-314/Bio/SeqIO/_twoBitIO.o -L/usr/lib -o build/lib.linux-loongarch64-cpython-314/Bio/SeqIO/_twoBitIO.cpython-314-loongarch64-linux-musl.so 2026-04-30 05:16:08,168 root INFO installing to build/bdist.linux-loongarch64/wheel 2026-04-30 05:16:08,168 root INFO running install 2026-04-30 05:16:08,181 root INFO running install_lib 2026-04-30 05:16:08,186 root INFO creating build/bdist.linux-loongarch64/wheel 2026-04-30 05:16:08,186 root INFO creating build/bdist.linux-loongarch64/wheel/Bio 2026-04-30 05:16:08,186 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/PopGen 2026-04-30 05:16:08,187 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/PopGen/GenePop 2026-04-30 05:16:08,187 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PopGen/GenePop/LargeFileParser.py -> build/bdist.linux-loongarch64/wheel/./Bio/PopGen/GenePop 2026-04-30 05:16:08,187 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PopGen/GenePop/FileParser.py -> build/bdist.linux-loongarch64/wheel/./Bio/PopGen/GenePop 2026-04-30 05:16:08,188 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PopGen/GenePop/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/PopGen/GenePop 2026-04-30 05:16:08,188 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PopGen/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/PopGen 2026-04-30 05:16:08,189 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/NMR 2026-04-30 05:16:08,189 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/NMR/xpktools.py -> build/bdist.linux-loongarch64/wheel/./Bio/NMR 2026-04-30 05:16:08,189 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/NMR/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/NMR 2026-04-30 05:16:08,190 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/NMR/NOEtools.py -> build/bdist.linux-loongarch64/wheel/./Bio/NMR 2026-04-30 05:16:08,190 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/ExPASy 2026-04-30 05:16:08,190 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/ExPASy/ScanProsite.py -> build/bdist.linux-loongarch64/wheel/./Bio/ExPASy 2026-04-30 05:16:08,191 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/ExPASy/Prodoc.py -> build/bdist.linux-loongarch64/wheel/./Bio/ExPASy 2026-04-30 05:16:08,191 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/ExPASy/Prosite.py -> build/bdist.linux-loongarch64/wheel/./Bio/ExPASy 2026-04-30 05:16:08,191 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/ExPASy/Enzyme.py -> build/bdist.linux-loongarch64/wheel/./Bio/ExPASy 2026-04-30 05:16:08,192 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/ExPASy/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/ExPASy 2026-04-30 05:16:08,192 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/ExPASy/cellosaurus.py -> build/bdist.linux-loongarch64/wheel/./Bio/ExPASy 2026-04-30 05:16:08,192 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/pairwise2.py -> build/bdist.linux-loongarch64/wheel/./Bio 2026-04-30 05:16:08,193 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/AlignIO 2026-04-30 05:16:08,193 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/AlignIO/MsfIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/AlignIO 2026-04-30 05:16:08,193 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/AlignIO/EmbossIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/AlignIO 2026-04-30 05:16:08,194 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/AlignIO/StockholmIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/AlignIO 2026-04-30 05:16:08,194 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/AlignIO/ClustalIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/AlignIO 2026-04-30 05:16:08,195 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/AlignIO/MafIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/AlignIO 2026-04-30 05:16:08,195 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/AlignIO/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/AlignIO 2026-04-30 05:16:08,195 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/AlignIO/FastaIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/AlignIO 2026-04-30 05:16:08,196 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/AlignIO/PhylipIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/AlignIO 2026-04-30 05:16:08,196 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/AlignIO/MauveIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/AlignIO 2026-04-30 05:16:08,196 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/AlignIO/NexusIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/AlignIO 2026-04-30 05:16:08,197 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/AlignIO/Interfaces.py -> build/bdist.linux-loongarch64/wheel/./Bio/AlignIO 2026-04-30 05:16:08,197 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SeqRecord.py -> build/bdist.linux-loongarch64/wheel/./Bio 2026-04-30 05:16:08,197 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/_utils.py -> build/bdist.linux-loongarch64/wheel/./Bio 2026-04-30 05:16:08,198 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/cpairwise2module.c -> build/bdist.linux-loongarch64/wheel/./Bio 2026-04-30 05:16:08,198 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/CAPS 2026-04-30 05:16:08,198 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/CAPS/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/CAPS 2026-04-30 05:16:08,199 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/Blast 2026-04-30 05:16:08,199 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Blast/_writers.py -> build/bdist.linux-loongarch64/wheel/./Bio/Blast 2026-04-30 05:16:08,200 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Blast/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/Blast 2026-04-30 05:16:08,200 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Blast/NCBIWWW.py -> build/bdist.linux-loongarch64/wheel/./Bio/Blast 2026-04-30 05:16:08,200 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Blast/NCBIXML.py -> build/bdist.linux-loongarch64/wheel/./Bio/Blast 2026-04-30 05:16:08,201 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Blast/_parser.py -> build/bdist.linux-loongarch64/wheel/./Bio/Blast 2026-04-30 05:16:08,201 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/cpairwise2.cpython-314-loongarch64-linux-musl.so -> build/bdist.linux-loongarch64/wheel/./Bio 2026-04-30 05:16:08,202 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/Emboss 2026-04-30 05:16:08,202 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Emboss/PrimerSearch.py -> build/bdist.linux-loongarch64/wheel/./Bio/Emboss 2026-04-30 05:16:08,202 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Emboss/Primer3.py -> build/bdist.linux-loongarch64/wheel/./Bio/Emboss 2026-04-30 05:16:08,203 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Emboss/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/Emboss 2026-04-30 05:16:08,203 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/TogoWS 2026-04-30 05:16:08,203 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/TogoWS/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/TogoWS 2026-04-30 05:16:08,204 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/PDB 2026-04-30 05:16:08,204 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/Chain.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-04-30 05:16:08,204 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/parse_pdb_header.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-04-30 05:16:08,205 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/Structure.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-04-30 05:16:08,205 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/NACCESS.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-04-30 05:16:08,205 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/MMCIFParser.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-04-30 05:16:08,206 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/internal_coords.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-04-30 05:16:08,206 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/StructureAlignment.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-04-30 05:16:08,207 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/Polypeptide.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-04-30 05:16:08,207 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/StructureBuilder.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-04-30 05:16:08,207 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/Selection.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-04-30 05:16:08,208 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/_bcif_helper.cpython-314-loongarch64-linux-musl.so -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-04-30 05:16:08,208 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/PICIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-04-30 05:16:08,209 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/PDBMLParser.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-04-30 05:16:08,209 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/Dice.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-04-30 05:16:08,209 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/ic_rebuild.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-04-30 05:16:08,210 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/kdtrees.cpython-314-loongarch64-linux-musl.so -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-04-30 05:16:08,210 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/AbstractPropertyMap.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-04-30 05:16:08,210 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/ccealign.cpython-314-loongarch64-linux-musl.so -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-04-30 05:16:08,211 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/cealign.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-04-30 05:16:08,211 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/DSSP.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-04-30 05:16:08,212 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/alphafold_db.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-04-30 05:16:08,212 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/HSExposure.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-04-30 05:16:08,212 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/PDBIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-04-30 05:16:08,213 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/Residue.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-04-30 05:16:08,213 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/ic_data.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-04-30 05:16:08,213 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/PSEA.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-04-30 05:16:08,214 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/FragmentMapper.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-04-30 05:16:08,214 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/vectors.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-04-30 05:16:08,214 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-04-30 05:16:08,215 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/MMCIF2Dict.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-04-30 05:16:08,215 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/mmcifio.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-04-30 05:16:08,215 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/binary_cif.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-04-30 05:16:08,216 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/NeighborSearch.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-04-30 05:16:08,216 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/bcifhelpermodule.c -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-04-30 05:16:08,216 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/Atom.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-04-30 05:16:08,217 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/ResidueDepth.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-04-30 05:16:08,217 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/PDBList.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-04-30 05:16:08,218 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/Model.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-04-30 05:16:08,218 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/Entity.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-04-30 05:16:08,218 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/PDBParser.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-04-30 05:16:08,219 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/kdtrees.c -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-04-30 05:16:08,219 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/Superimposer.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-04-30 05:16:08,219 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/ccealignmodule.c -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-04-30 05:16:08,220 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/qcprot.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-04-30 05:16:08,220 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/SCADIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-04-30 05:16:08,220 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/SASA.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-04-30 05:16:08,221 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/PDB/mmtf 2026-04-30 05:16:08,221 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/mmtf/DefaultParser.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB/mmtf 2026-04-30 05:16:08,221 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/mmtf/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB/mmtf 2026-04-30 05:16:08,222 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/mmtf/mmtfio.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB/mmtf 2026-04-30 05:16:08,222 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/PDBExceptions.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-04-30 05:16:08,223 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/SwissProt 2026-04-30 05:16:08,223 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SwissProt/KeyWList.py -> build/bdist.linux-loongarch64/wheel/./Bio/SwissProt 2026-04-30 05:16:08,223 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SwissProt/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/SwissProt 2026-04-30 05:16:08,224 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/SeqUtils 2026-04-30 05:16:08,224 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SeqUtils/IsoelectricPoint.py -> build/bdist.linux-loongarch64/wheel/./Bio/SeqUtils 2026-04-30 05:16:08,224 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SeqUtils/ProtParam.py -> build/bdist.linux-loongarch64/wheel/./Bio/SeqUtils 2026-04-30 05:16:08,225 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SeqUtils/MeltingTemp.py -> build/bdist.linux-loongarch64/wheel/./Bio/SeqUtils 2026-04-30 05:16:08,225 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SeqUtils/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/SeqUtils 2026-04-30 05:16:08,225 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SeqUtils/CheckSum.py -> build/bdist.linux-loongarch64/wheel/./Bio/SeqUtils 2026-04-30 05:16:08,226 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SeqUtils/lcc.py -> build/bdist.linux-loongarch64/wheel/./Bio/SeqUtils 2026-04-30 05:16:08,226 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SeqUtils/ProtParamData.py -> build/bdist.linux-loongarch64/wheel/./Bio/SeqUtils 2026-04-30 05:16:08,226 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/Geo 2026-04-30 05:16:08,227 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Geo/Record.py -> build/bdist.linux-loongarch64/wheel/./Bio/Geo 2026-04-30 05:16:08,227 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Geo/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/Geo 2026-04-30 05:16:08,227 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/py.typed -> build/bdist.linux-loongarch64/wheel/./Bio 2026-04-30 05:16:08,228 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/UniProt 2026-04-30 05:16:08,228 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/UniProt/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/UniProt 2026-04-30 05:16:08,228 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/UniProt/GOA.py -> build/bdist.linux-loongarch64/wheel/./Bio/UniProt 2026-04-30 05:16:08,229 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/SCOP 2026-04-30 05:16:08,229 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SCOP/Hie.py -> build/bdist.linux-loongarch64/wheel/./Bio/SCOP 2026-04-30 05:16:08,229 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SCOP/Raf.py -> build/bdist.linux-loongarch64/wheel/./Bio/SCOP 2026-04-30 05:16:08,230 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SCOP/Dom.py -> build/bdist.linux-loongarch64/wheel/./Bio/SCOP 2026-04-30 05:16:08,230 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SCOP/Cla.py -> build/bdist.linux-loongarch64/wheel/./Bio/SCOP 2026-04-30 05:16:08,230 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SCOP/Des.py -> build/bdist.linux-loongarch64/wheel/./Bio/SCOP 2026-04-30 05:16:08,231 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SCOP/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/SCOP 2026-04-30 05:16:08,231 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SCOP/Residues.py -> build/bdist.linux-loongarch64/wheel/./Bio/SCOP 2026-04-30 05:16:08,232 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/SearchIO 2026-04-30 05:16:08,232 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/SearchIO/InfernalIO 2026-04-30 05:16:08,232 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/InfernalIO/_base.py -> build/bdist.linux-loongarch64/wheel/./Bio/SearchIO/InfernalIO 2026-04-30 05:16:08,233 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/InfernalIO/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/SearchIO/InfernalIO 2026-04-30 05:16:08,233 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/InfernalIO/infernal_tab.py -> build/bdist.linux-loongarch64/wheel/./Bio/SearchIO/InfernalIO 2026-04-30 05:16:08,233 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/InfernalIO/infernal_text.py -> build/bdist.linux-loongarch64/wheel/./Bio/SearchIO/InfernalIO 2026-04-30 05:16:08,234 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/_utils.py -> build/bdist.linux-loongarch64/wheel/./Bio/SearchIO 2026-04-30 05:16:08,234 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/_index.py -> build/bdist.linux-loongarch64/wheel/./Bio/SearchIO 2026-04-30 05:16:08,234 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/SearchIO/_model 2026-04-30 05:16:08,235 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/_model/query.py -> build/bdist.linux-loongarch64/wheel/./Bio/SearchIO/_model 2026-04-30 05:16:08,235 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/_model/_base.py -> build/bdist.linux-loongarch64/wheel/./Bio/SearchIO/_model 2026-04-30 05:16:08,235 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/_model/hit.py -> build/bdist.linux-loongarch64/wheel/./Bio/SearchIO/_model 2026-04-30 05:16:08,236 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/_model/hsp.py -> build/bdist.linux-loongarch64/wheel/./Bio/SearchIO/_model 2026-04-30 05:16:08,236 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/_model/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/SearchIO/_model 2026-04-30 05:16:08,236 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/SearchIO/BlastIO 2026-04-30 05:16:08,237 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/BlastIO/blast_tab.py -> build/bdist.linux-loongarch64/wheel/./Bio/SearchIO/BlastIO 2026-04-30 05:16:08,237 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/BlastIO/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/SearchIO/BlastIO 2026-04-30 05:16:08,238 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/BlastIO/blast_xml.py -> build/bdist.linux-loongarch64/wheel/./Bio/SearchIO/BlastIO 2026-04-30 05:16:08,238 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/SearchIO/HmmerIO 2026-04-30 05:16:08,238 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/HmmerIO/hmmer3_tab.py -> build/bdist.linux-loongarch64/wheel/./Bio/SearchIO/HmmerIO 2026-04-30 05:16:08,239 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/HmmerIO/hmmer3_text.py -> build/bdist.linux-loongarch64/wheel/./Bio/SearchIO/HmmerIO 2026-04-30 05:16:08,239 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/HmmerIO/_base.py -> build/bdist.linux-loongarch64/wheel/./Bio/SearchIO/HmmerIO 2026-04-30 05:16:08,239 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/HmmerIO/hmmer3_domtab.py -> build/bdist.linux-loongarch64/wheel/./Bio/SearchIO/HmmerIO 2026-04-30 05:16:08,240 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/HmmerIO/hmmer2_text.py -> build/bdist.linux-loongarch64/wheel/./Bio/SearchIO/HmmerIO 2026-04-30 05:16:08,240 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/HmmerIO/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/SearchIO/HmmerIO 2026-04-30 05:16:08,240 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/SearchIO 2026-04-30 05:16:08,241 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/SearchIO/InterproscanIO 2026-04-30 05:16:08,241 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/InterproscanIO/interproscan_xml.py -> build/bdist.linux-loongarch64/wheel/./Bio/SearchIO/InterproscanIO 2026-04-30 05:16:08,241 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/InterproscanIO/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/SearchIO/InterproscanIO 2026-04-30 05:16:08,242 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/SearchIO/ExonerateIO 2026-04-30 05:16:08,242 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/ExonerateIO/exonerate_vulgar.py -> build/bdist.linux-loongarch64/wheel/./Bio/SearchIO/ExonerateIO 2026-04-30 05:16:08,242 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/ExonerateIO/exonerate_cigar.py -> build/bdist.linux-loongarch64/wheel/./Bio/SearchIO/ExonerateIO 2026-04-30 05:16:08,243 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/ExonerateIO/_base.py -> build/bdist.linux-loongarch64/wheel/./Bio/SearchIO/ExonerateIO 2026-04-30 05:16:08,243 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/ExonerateIO/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/SearchIO/ExonerateIO 2026-04-30 05:16:08,243 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/ExonerateIO/exonerate_text.py -> build/bdist.linux-loongarch64/wheel/./Bio/SearchIO/ExonerateIO 2026-04-30 05:16:08,244 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/FastaIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/SearchIO 2026-04-30 05:16:08,244 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/SearchIO/HHsuiteIO 2026-04-30 05:16:08,245 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/HHsuiteIO/hhsuite2_text.py -> build/bdist.linux-loongarch64/wheel/./Bio/SearchIO/HHsuiteIO 2026-04-30 05:16:08,245 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/HHsuiteIO/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/SearchIO/HHsuiteIO 2026-04-30 05:16:08,245 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/BlatIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/SearchIO 2026-04-30 05:16:08,246 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/codonalign 2026-04-30 05:16:08,246 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/codonalign/codonseq.py -> build/bdist.linux-loongarch64/wheel/./Bio/codonalign 2026-04-30 05:16:08,246 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/codonalign/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/codonalign 2026-04-30 05:16:08,247 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/codonalign/codonalignment.py -> build/bdist.linux-loongarch64/wheel/./Bio/codonalign 2026-04-30 05:16:08,247 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/Sequencing 2026-04-30 05:16:08,247 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Sequencing/Phd.py -> build/bdist.linux-loongarch64/wheel/./Bio/Sequencing 2026-04-30 05:16:08,248 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Sequencing/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/Sequencing 2026-04-30 05:16:08,248 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Sequencing/Ace.py -> build/bdist.linux-loongarch64/wheel/./Bio/Sequencing 2026-04-30 05:16:08,249 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/Pathway 2026-04-30 05:16:08,249 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Pathway/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/Pathway 2026-04-30 05:16:08,249 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/Pathway/Rep 2026-04-30 05:16:08,249 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Pathway/Rep/MultiGraph.py -> build/bdist.linux-loongarch64/wheel/./Bio/Pathway/Rep 2026-04-30 05:16:08,250 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Pathway/Rep/Graph.py -> build/bdist.linux-loongarch64/wheel/./Bio/Pathway/Rep 2026-04-30 05:16:08,250 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Pathway/Rep/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/Pathway/Rep 2026-04-30 05:16:08,251 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/Compass 2026-04-30 05:16:08,251 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Compass/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/Compass 2026-04-30 05:16:08,251 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/GenBank 2026-04-30 05:16:08,251 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/GenBank/utils.py -> build/bdist.linux-loongarch64/wheel/./Bio/GenBank 2026-04-30 05:16:08,252 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/GenBank/Record.py -> build/bdist.linux-loongarch64/wheel/./Bio/GenBank 2026-04-30 05:16:08,252 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/GenBank/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/GenBank 2026-04-30 05:16:08,253 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/GenBank/Scanner.py -> build/bdist.linux-loongarch64/wheel/./Bio/GenBank 2026-04-30 05:16:08,253 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/motifs 2026-04-30 05:16:08,253 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/motifs/thresholds.py -> build/bdist.linux-loongarch64/wheel/./Bio/motifs 2026-04-30 05:16:08,254 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/motifs/_pwm.cpython-314-loongarch64-linux-musl.so -> build/bdist.linux-loongarch64/wheel/./Bio/motifs 2026-04-30 05:16:08,254 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/motifs/clusterbuster.py -> build/bdist.linux-loongarch64/wheel/./Bio/motifs 2026-04-30 05:16:08,255 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/motifs/matrix.py -> build/bdist.linux-loongarch64/wheel/./Bio/motifs 2026-04-30 05:16:08,255 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/motifs/meme.py -> build/bdist.linux-loongarch64/wheel/./Bio/motifs 2026-04-30 05:16:08,255 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/motifs/mast.py -> build/bdist.linux-loongarch64/wheel/./Bio/motifs 2026-04-30 05:16:08,256 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/motifs/minimal.py -> build/bdist.linux-loongarch64/wheel/./Bio/motifs 2026-04-30 05:16:08,256 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/motifs/pfm.py -> build/bdist.linux-loongarch64/wheel/./Bio/motifs 2026-04-30 05:16:08,256 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/motifs/_pwm.c -> build/bdist.linux-loongarch64/wheel/./Bio/motifs 2026-04-30 05:16:08,257 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/motifs/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/motifs 2026-04-30 05:16:08,257 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/motifs/xms.py -> build/bdist.linux-loongarch64/wheel/./Bio/motifs 2026-04-30 05:16:08,257 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/motifs/alignace.py -> build/bdist.linux-loongarch64/wheel/./Bio/motifs 2026-04-30 05:16:08,258 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/motifs/jaspar 2026-04-30 05:16:08,258 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/motifs/jaspar/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/motifs/jaspar 2026-04-30 05:16:08,258 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/motifs/jaspar/db.py -> build/bdist.linux-loongarch64/wheel/./Bio/motifs/jaspar 2026-04-30 05:16:08,259 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/motifs/transfac.py -> build/bdist.linux-loongarch64/wheel/./Bio/motifs 2026-04-30 05:16:08,259 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/Medline 2026-04-30 05:16:08,259 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Medline/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/Medline 2026-04-30 05:16:08,260 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/SeqIO 2026-04-30 05:16:08,260 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SeqIO/GfaIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/SeqIO 2026-04-30 05:16:08,261 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SeqIO/SeqXmlIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/SeqIO 2026-04-30 05:16:08,261 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SeqIO/AbiIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/SeqIO 2026-04-30 05:16:08,261 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SeqIO/NibIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/SeqIO 2026-04-30 05:16:08,262 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SeqIO/SwissIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/SeqIO 2026-04-30 05:16:08,262 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SeqIO/_twoBitIO.cpython-314-loongarch64-linux-musl.so -> build/bdist.linux-loongarch64/wheel/./Bio/SeqIO 2026-04-30 05:16:08,262 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SeqIO/TabIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/SeqIO 2026-04-30 05:16:08,263 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SeqIO/PirIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/SeqIO 2026-04-30 05:16:08,263 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SeqIO/_twoBitIO.c -> build/bdist.linux-loongarch64/wheel/./Bio/SeqIO 2026-04-30 05:16:08,263 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SeqIO/SffIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/SeqIO 2026-04-30 05:16:08,264 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SeqIO/IgIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/SeqIO 2026-04-30 05:16:08,264 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SeqIO/InsdcIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/SeqIO 2026-04-30 05:16:08,265 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SeqIO/_index.py -> build/bdist.linux-loongarch64/wheel/./Bio/SeqIO 2026-04-30 05:16:08,265 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SeqIO/PdbIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/SeqIO 2026-04-30 05:16:08,265 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SeqIO/UniprotIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/SeqIO 2026-04-30 05:16:08,266 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SeqIO/XdnaIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/SeqIO 2026-04-30 05:16:08,266 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SeqIO/SnapGeneIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/SeqIO 2026-04-30 05:16:08,266 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SeqIO/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/SeqIO 2026-04-30 05:16:08,267 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SeqIO/QualityIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/SeqIO 2026-04-30 05:16:08,267 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SeqIO/GckIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/SeqIO 2026-04-30 05:16:08,268 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SeqIO/PhdIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/SeqIO 2026-04-30 05:16:08,268 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SeqIO/FastaIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/SeqIO 2026-04-30 05:16:08,268 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SeqIO/TwoBitIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/SeqIO 2026-04-30 05:16:08,269 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SeqIO/AceIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/SeqIO 2026-04-30 05:16:08,269 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SeqIO/Interfaces.py -> build/bdist.linux-loongarch64/wheel/./Bio/SeqIO 2026-04-30 05:16:08,269 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SeqFeature.py -> build/bdist.linux-loongarch64/wheel/./Bio 2026-04-30 05:16:08,270 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/UniGene 2026-04-30 05:16:08,270 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/UniGene/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/UniGene 2026-04-30 05:16:08,271 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/Align 2026-04-30 05:16:08,271 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/chain.py -> build/bdist.linux-loongarch64/wheel/./Bio/Align 2026-04-30 05:16:08,271 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/_pairwisealigner.cpython-314-loongarch64-linux-musl.so -> build/bdist.linux-loongarch64/wheel/./Bio/Align 2026-04-30 05:16:08,272 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/AlignInfo.py -> build/bdist.linux-loongarch64/wheel/./Bio/Align 2026-04-30 05:16:08,272 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/nexus.py -> build/bdist.linux-loongarch64/wheel/./Bio/Align 2026-04-30 05:16:08,273 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/_pairwisealigner.h -> build/bdist.linux-loongarch64/wheel/./Bio/Align 2026-04-30 05:16:08,273 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/interfaces.py -> build/bdist.linux-loongarch64/wheel/./Bio/Align 2026-04-30 05:16:08,273 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/_codonaligner.cpython-314-loongarch64-linux-musl.so -> build/bdist.linux-loongarch64/wheel/./Bio/Align 2026-04-30 05:16:08,274 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/_aligncore.cpython-314-loongarch64-linux-musl.so -> build/bdist.linux-loongarch64/wheel/./Bio/Align 2026-04-30 05:16:08,274 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/exonerate.py -> build/bdist.linux-loongarch64/wheel/./Bio/Align 2026-04-30 05:16:08,275 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/Align/substitution_matrices 2026-04-30 05:16:08,275 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/Align/substitution_matrices/data 2026-04-30 05:16:08,275 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data/MDM78 -> build/bdist.linux-loongarch64/wheel/./Bio/Align/substitution_matrices/data 2026-04-30 05:16:08,276 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data/JOHNSON -> build/bdist.linux-loongarch64/wheel/./Bio/Align/substitution_matrices/data 2026-04-30 05:16:08,276 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data/STR -> build/bdist.linux-loongarch64/wheel/./Bio/Align/substitution_matrices/data 2026-04-30 05:16:08,276 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data/BLOSUM80 -> build/bdist.linux-loongarch64/wheel/./Bio/Align/substitution_matrices/data 2026-04-30 05:16:08,277 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data/BENNER22 -> build/bdist.linux-loongarch64/wheel/./Bio/Align/substitution_matrices/data 2026-04-30 05:16:08,277 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data/LEVIN -> build/bdist.linux-loongarch64/wheel/./Bio/Align/substitution_matrices/data 2026-04-30 05:16:08,277 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data/RAO -> build/bdist.linux-loongarch64/wheel/./Bio/Align/substitution_matrices/data 2026-04-30 05:16:08,278 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data/GENETIC -> build/bdist.linux-loongarch64/wheel/./Bio/Align/substitution_matrices/data 2026-04-30 05:16:08,278 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data/FENG -> build/bdist.linux-loongarch64/wheel/./Bio/Align/substitution_matrices/data 2026-04-30 05:16:08,278 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data/JONES -> build/bdist.linux-loongarch64/wheel/./Bio/Align/substitution_matrices/data 2026-04-30 05:16:08,279 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data/BLOSUM45 -> build/bdist.linux-loongarch64/wheel/./Bio/Align/substitution_matrices/data 2026-04-30 05:16:08,279 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data/RISLER -> build/bdist.linux-loongarch64/wheel/./Bio/Align/substitution_matrices/data 2026-04-30 05:16:08,279 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data/NUC.4.4 -> build/bdist.linux-loongarch64/wheel/./Bio/Align/substitution_matrices/data 2026-04-30 05:16:08,280 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data/BLOSUM62 -> build/bdist.linux-loongarch64/wheel/./Bio/Align/substitution_matrices/data 2026-04-30 05:16:08,280 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data/PAM250 -> build/bdist.linux-loongarch64/wheel/./Bio/Align/substitution_matrices/data 2026-04-30 05:16:08,280 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data/GONNET1992 -> build/bdist.linux-loongarch64/wheel/./Bio/Align/substitution_matrices/data 2026-04-30 05:16:08,281 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data/BENNER74 -> build/bdist.linux-loongarch64/wheel/./Bio/Align/substitution_matrices/data 2026-04-30 05:16:08,281 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data/MEGABLAST -> build/bdist.linux-loongarch64/wheel/./Bio/Align/substitution_matrices/data 2026-04-30 05:16:08,281 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data/MCLACHLAN -> build/bdist.linux-loongarch64/wheel/./Bio/Align/substitution_matrices/data 2026-04-30 05:16:08,282 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data/HOXD70 -> build/bdist.linux-loongarch64/wheel/./Bio/Align/substitution_matrices/data 2026-04-30 05:16:08,282 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data/TRANS -> build/bdist.linux-loongarch64/wheel/./Bio/Align/substitution_matrices/data 2026-04-30 05:16:08,282 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data/DAYHOFF -> build/bdist.linux-loongarch64/wheel/./Bio/Align/substitution_matrices/data 2026-04-30 05:16:08,283 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data/BLASTP -> build/bdist.linux-loongarch64/wheel/./Bio/Align/substitution_matrices/data 2026-04-30 05:16:08,283 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data/BLOSUM50 -> build/bdist.linux-loongarch64/wheel/./Bio/Align/substitution_matrices/data 2026-04-30 05:16:08,283 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data/BLOSUM90 -> build/bdist.linux-loongarch64/wheel/./Bio/Align/substitution_matrices/data 2026-04-30 05:16:08,284 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data/SCHNEIDER -> build/bdist.linux-loongarch64/wheel/./Bio/Align/substitution_matrices/data 2026-04-30 05:16:08,284 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data/BENNER6 -> build/bdist.linux-loongarch64/wheel/./Bio/Align/substitution_matrices/data 2026-04-30 05:16:08,284 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data/BLASTN -> build/bdist.linux-loongarch64/wheel/./Bio/Align/substitution_matrices/data 2026-04-30 05:16:08,285 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data/PAM30 -> build/bdist.linux-loongarch64/wheel/./Bio/Align/substitution_matrices/data 2026-04-30 05:16:08,285 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data/PAM70 -> build/bdist.linux-loongarch64/wheel/./Bio/Align/substitution_matrices/data 2026-04-30 05:16:08,285 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/_arraycore.c -> build/bdist.linux-loongarch64/wheel/./Bio/Align/substitution_matrices 2026-04-30 05:16:08,286 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/_arraycore.h -> build/bdist.linux-loongarch64/wheel/./Bio/Align/substitution_matrices 2026-04-30 05:16:08,286 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/_arraycore.cpython-314-loongarch64-linux-musl.so -> build/bdist.linux-loongarch64/wheel/./Bio/Align/substitution_matrices 2026-04-30 05:16:08,286 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/Align/substitution_matrices 2026-04-30 05:16:08,287 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/bigmaf.py -> build/bdist.linux-loongarch64/wheel/./Bio/Align 2026-04-30 05:16:08,287 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/sam.py -> build/bdist.linux-loongarch64/wheel/./Bio/Align 2026-04-30 05:16:08,288 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/bed.py -> build/bdist.linux-loongarch64/wheel/./Bio/Align 2026-04-30 05:16:08,288 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/hhr.py -> build/bdist.linux-loongarch64/wheel/./Bio/Align 2026-04-30 05:16:08,288 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/phylip.py -> build/bdist.linux-loongarch64/wheel/./Bio/Align 2026-04-30 05:16:08,289 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/_alignmentcounts.c -> build/bdist.linux-loongarch64/wheel/./Bio/Align 2026-04-30 05:16:08,289 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/msf.py -> build/bdist.linux-loongarch64/wheel/./Bio/Align 2026-04-30 05:16:08,289 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/bigbed.py -> build/bdist.linux-loongarch64/wheel/./Bio/Align 2026-04-30 05:16:08,290 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/mauve.py -> build/bdist.linux-loongarch64/wheel/./Bio/Align 2026-04-30 05:16:08,290 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/_pairwisealigner.c -> build/bdist.linux-loongarch64/wheel/./Bio/Align 2026-04-30 05:16:08,291 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/_aligncore.c -> build/bdist.linux-loongarch64/wheel/./Bio/Align 2026-04-30 05:16:08,291 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/emboss.py -> build/bdist.linux-loongarch64/wheel/./Bio/Align 2026-04-30 05:16:08,292 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/tabular.py -> build/bdist.linux-loongarch64/wheel/./Bio/Align 2026-04-30 05:16:08,292 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/Align 2026-04-30 05:16:08,293 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/_alignmentcounts.cpython-314-loongarch64-linux-musl.so -> build/bdist.linux-loongarch64/wheel/./Bio/Align 2026-04-30 05:16:08,293 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/analysis.py -> build/bdist.linux-loongarch64/wheel/./Bio/Align 2026-04-30 05:16:08,293 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/psl.py -> build/bdist.linux-loongarch64/wheel/./Bio/Align 2026-04-30 05:16:08,294 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/_codonaligner.c -> build/bdist.linux-loongarch64/wheel/./Bio/Align 2026-04-30 05:16:08,294 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/bigpsl.py -> build/bdist.linux-loongarch64/wheel/./Bio/Align 2026-04-30 05:16:08,295 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/clustal.py -> build/bdist.linux-loongarch64/wheel/./Bio/Align 2026-04-30 05:16:08,295 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/a2m.py -> build/bdist.linux-loongarch64/wheel/./Bio/Align 2026-04-30 05:16:08,295 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/stockholm.py -> build/bdist.linux-loongarch64/wheel/./Bio/Align 2026-04-30 05:16:08,296 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/fasta.py -> build/bdist.linux-loongarch64/wheel/./Bio/Align 2026-04-30 05:16:08,296 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/maf.py -> build/bdist.linux-loongarch64/wheel/./Bio/Align 2026-04-30 05:16:08,296 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/File.py -> build/bdist.linux-loongarch64/wheel/./Bio 2026-04-30 05:16:08,297 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/Phylo 2026-04-30 05:16:08,297 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Phylo/NewickIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/Phylo 2026-04-30 05:16:08,297 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Phylo/PhyloXML.py -> build/bdist.linux-loongarch64/wheel/./Bio/Phylo 2026-04-30 05:16:08,298 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Phylo/_utils.py -> build/bdist.linux-loongarch64/wheel/./Bio/Phylo 2026-04-30 05:16:08,298 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Phylo/NeXMLIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/Phylo 2026-04-30 05:16:08,298 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Phylo/NeXML.py -> build/bdist.linux-loongarch64/wheel/./Bio/Phylo 2026-04-30 05:16:08,299 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/Phylo/PAML 2026-04-30 05:16:08,299 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Phylo/PAML/chi2.py -> build/bdist.linux-loongarch64/wheel/./Bio/Phylo/PAML 2026-04-30 05:16:08,299 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Phylo/PAML/yn00.py -> build/bdist.linux-loongarch64/wheel/./Bio/Phylo/PAML 2026-04-30 05:16:08,300 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Phylo/PAML/codeml.py -> build/bdist.linux-loongarch64/wheel/./Bio/Phylo/PAML 2026-04-30 05:16:08,300 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Phylo/PAML/baseml.py -> build/bdist.linux-loongarch64/wheel/./Bio/Phylo/PAML 2026-04-30 05:16:08,301 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Phylo/PAML/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/Phylo/PAML 2026-04-30 05:16:08,301 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Phylo/PAML/_paml.py -> build/bdist.linux-loongarch64/wheel/./Bio/Phylo/PAML 2026-04-30 05:16:08,301 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Phylo/PAML/_parse_codeml.py -> build/bdist.linux-loongarch64/wheel/./Bio/Phylo/PAML 2026-04-30 05:16:08,302 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Phylo/PAML/_parse_baseml.py -> build/bdist.linux-loongarch64/wheel/./Bio/Phylo/PAML 2026-04-30 05:16:08,302 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Phylo/PAML/_parse_yn00.py -> build/bdist.linux-loongarch64/wheel/./Bio/Phylo/PAML 2026-04-30 05:16:08,302 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Phylo/Newick.py -> build/bdist.linux-loongarch64/wheel/./Bio/Phylo 2026-04-30 05:16:08,303 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Phylo/BaseTree.py -> build/bdist.linux-loongarch64/wheel/./Bio/Phylo 2026-04-30 05:16:08,303 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Phylo/TreeConstruction.py -> build/bdist.linux-loongarch64/wheel/./Bio/Phylo 2026-04-30 05:16:08,303 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Phylo/PhyloXMLIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/Phylo 2026-04-30 05:16:08,304 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Phylo/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/Phylo 2026-04-30 05:16:08,304 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Phylo/Consensus.py -> build/bdist.linux-loongarch64/wheel/./Bio/Phylo 2026-04-30 05:16:08,304 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Phylo/CDAOIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/Phylo 2026-04-30 05:16:08,305 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Phylo/_cdao_owl.py -> build/bdist.linux-loongarch64/wheel/./Bio/Phylo 2026-04-30 05:16:08,305 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Phylo/CDAO.py -> build/bdist.linux-loongarch64/wheel/./Bio/Phylo 2026-04-30 05:16:08,306 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Phylo/_io.py -> build/bdist.linux-loongarch64/wheel/./Bio/Phylo 2026-04-30 05:16:08,306 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Phylo/NexusIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/Phylo 2026-04-30 05:16:08,306 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/phenotype 2026-04-30 05:16:08,307 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/phenotype/phen_micro.py -> build/bdist.linux-loongarch64/wheel/./Bio/phenotype 2026-04-30 05:16:08,307 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/phenotype/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/phenotype 2026-04-30 05:16:08,307 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/phenotype/pm_fitting.py -> build/bdist.linux-loongarch64/wheel/./Bio/phenotype 2026-04-30 05:16:08,308 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/Alphabet 2026-04-30 05:16:08,308 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Alphabet/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/Alphabet 2026-04-30 05:16:08,308 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio 2026-04-30 05:16:08,309 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/Restriction 2026-04-30 05:16:08,309 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Restriction/PrintFormat.py -> build/bdist.linux-loongarch64/wheel/./Bio/Restriction 2026-04-30 05:16:08,309 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Restriction/Restriction.py -> build/bdist.linux-loongarch64/wheel/./Bio/Restriction 2026-04-30 05:16:08,310 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Restriction/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/Restriction 2026-04-30 05:16:08,310 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Restriction/Restriction_Dictionary.py -> build/bdist.linux-loongarch64/wheel/./Bio/Restriction 2026-04-30 05:16:08,311 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/Entrez 2026-04-30 05:16:08,312 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/Entrez/DTDs 2026-04-30 05:16:08,312 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/isoamsa.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,313 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/phrase.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,313 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Entity.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,313 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/JATS-link1-3.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,314 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/isonum.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,314 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/esummary_gene.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,314 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/JATS-common-atts1-3.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,315 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/ePost_020511.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,315 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_GBSeq.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,315 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/chars.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,316 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Seqloc.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,316 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/isogrk3.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,317 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/notat.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,317 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/references.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,317 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/EMBL_General.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,318 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/JATS-XHTMLtablesetup1-3.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,318 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/isoamsr.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,318 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/journalmeta.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,319 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/elink_020122.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,319 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Seqres.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,319 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/JATS-mathml3-modules1-3.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,320 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Rsite.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,320 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/EMBL_General.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,320 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Sequence.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,321 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/isogrk2.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,321 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Variation.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,322 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_ID1Access.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,322 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/pubmed_080101.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,322 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Seq_split.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,323 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Organism.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,323 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Seqset.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,323 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/default-mixes.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,324 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Entrez2.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,324 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/nlmcatalogrecordset_170601.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,324 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Cdd.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,325 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/xhtml-inlstyle-1.mod -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,325 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Seqalign.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,325 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/MMDB.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,326 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Organism.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,326 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/JATS-para1-3.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,326 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/PIR_General.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,327 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_ObjPrt.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,327 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/isobox.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,327 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/mathmlsetup.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,328 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/JATS-math1-3.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,328 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Pub.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,328 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Seqalign.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,329 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/pubmed_180601.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,329 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_ID2Access.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,330 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/nlmmedlinecitationset_130501.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,330 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/bookdoc_150101.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,330 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_General.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,331 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/htmltable.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,331 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/mathml-in-pubmed.mod -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,331 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Cdd.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,332 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/JATS-chars1-3.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,332 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/PRF_General.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,332 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Cn3d.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,333 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/link.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,333 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_BioTree.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,333 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/SP_General.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,334 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_BioTree.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,334 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/JATS-articlemeta1-3.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,335 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/esummary-v1.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,335 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/isogrk4.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,335 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/eLink_101123.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,336 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_RNA.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,336 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/PDB_General.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,336 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/mmlalias.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,337 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/bookdoc_140101.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,337 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Medlars.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,337 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/PDB_General.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,338 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/isocyr1.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,338 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/MMDB_Structural_model.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,338 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/nlmmedlinecitation_090101.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,339 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/Docsum_3_2.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,339 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/nlmmedlinecitation_080101.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,339 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_General.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,340 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/JATS-related-object1-3.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,340 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/isodia.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,341 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/JATS-section1-3.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,341 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/pmc-1.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,341 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_SeqTable.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,342 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/modules.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,342 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Seqfeat.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,342 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/JATS-list1-3.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,343 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Project.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,343 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Protein.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,343 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/JATS-default-classes1-3.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,344 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/esearch.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,344 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/pubmed_110101.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,345 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/HomoloGene.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,345 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/JATS-notat1-3.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,345 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/backmatter.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,346 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_BioSource.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,346 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/bookdoc_130101.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,346 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Mim.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,347 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Blast4.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,347 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/isomfrk.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,347 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_FeatDef.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,348 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/JATS-archivecustom-modules1-3.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,348 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/archivecustom-mixes.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,349 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Entrezgene.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,349 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/para.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,349 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/eInfo_020511.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,350 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/JATS-nlmcitation1-3.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,350 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Gene.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,350 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_BioSource.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,351 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Submit.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,351 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/Docsum_3_4.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,351 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_MedArchive.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,352 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/JATS-journalmeta1-3.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,352 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/archivecustom-models.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,353 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Medline.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,353 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/JATS-modules1-3.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,353 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/section.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,354 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/eLink_090910.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,354 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/nlmmedlinecitationset_110101.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,354 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/math.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,355 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Remap.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,355 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/MMDB_Chemical_graph.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,355 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Mime.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,356 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/xhtml-table-1.mod -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,356 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/GenBank_General.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,356 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/eSearch_020511.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,357 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_SeqCode.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,357 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/pubmed_140101.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,357 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/nlmmedlinecitationset_150101.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,358 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/Docsum_3_2.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,358 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/MMDB_Structural_model.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,358 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Mime.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,359 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Seqfeat.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,359 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Entrez2.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,360 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/archivearticle.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,360 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_PCSubstance.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,360 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/nlmmedline_011101.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,361 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/INSD_INSDSeq.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,361 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/nlmserials_100101.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,361 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/pubmed_100301.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,362 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/pubmed_020114.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,362 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/common.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,363 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_TxInit.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,363 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_TSeq.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,363 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/archivecustom-classes.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,364 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/Docsum_3_1.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,364 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/mathml3.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,364 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/JATS-mathml3-mathmlsetup1-3.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,365 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/PIR_General.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,365 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/display.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,366 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/Docsum_3_3.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,366 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/PRF_General.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,366 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/SP_General.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,367 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/nlmmedlinecitationset_140101.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,367 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_BlastOutput.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,367 root INFO copying 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build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,369 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/articlemeta.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,370 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/HomoloGene.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,370 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_BlastDL.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,371 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/isogrk1.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,371 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Sequence.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,371 root INFO copying 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build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,375 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/isoamso.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,376 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/isoamsc.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,376 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/isoamsn.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,376 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/pubmed_180101.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,377 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/Docsum_3_4.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,377 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/JATS-common1-3.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,378 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/nlmsharedcatcit_080101.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,378 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/taxon.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,379 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Access.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,379 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/nlmmedlinecitation_011101.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,379 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/JATS-backmatter1-3.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,380 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Access.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,380 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/pubmed_120101.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,380 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/JATS-archivecustom-models1-3.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,381 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Gene.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,381 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/isolat1.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,381 root INFO copying 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build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,384 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Seqset.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,384 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/list.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,384 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Seqres.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,385 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/JATS-display1-3.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,385 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/epost.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,385 root INFO copying 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build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/JATS-archivecustom-classes1-3.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,394 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/MMDB.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,394 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/INSD_INSDSeq.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,394 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Seqloc.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,395 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/nlmmedlinecitationset_120101.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,395 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/MMDB_Features.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,395 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/JATS-phrase1-3.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,396 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/nlmmedlinecitationset_130101.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,396 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_all.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,397 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/mathml2.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,397 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_SeqTable.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,397 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/MMDB_Features.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,398 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/JATS-archivecustom-mixes1-3.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,398 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NSE.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,398 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/pubmed_150101.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,399 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_PCSubstance.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,399 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_ObjPrt.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,400 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_TxInit.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,400 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/nlmmedline_080101.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,400 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Biblio.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,401 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/JATS-default-mixes1-3.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,401 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/Docsum_3_3.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,401 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/nlmcommon_090101.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,402 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/pubmed_130501.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,402 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/einfo.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,402 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/format.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,403 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_RNA.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,403 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_PCAssay.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,403 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/bookdoc_100301.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,404 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/JATS-archivearticle1-3-mathml3.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,404 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_MedArchive.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,405 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/isomopf.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,405 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/isopub.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,405 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/XHTMLtablesetup.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,406 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/xmlspecchars.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,406 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/nlmcommon_080101.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,406 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Biblio.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,407 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/pubmed_130101.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,407 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/nlmmedline_090101.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,407 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_PubMed.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,408 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/nlmcommon_011101.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,408 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/pubmed_100101.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,408 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/nlmserials_080101.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,409 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Protein.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,409 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Variation.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,409 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_PubMed.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,410 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/JATS-references1-3.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,410 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/OMSSA.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,411 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_SeqCode.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,411 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Systems.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,411 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_ScoreMat.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,412 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/JATS-format1-3.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,412 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Entrezgene.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,412 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NSE.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,413 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Remap.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,413 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Medline.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,413 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_BlastDL.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,414 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/JATS-xmlspecchars1-3.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,414 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/elink.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,415 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/bookdoc_120101.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,415 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Seq_split.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,415 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/OMSSA.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-04-30 05:16:08,416 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez 2026-04-30 05:16:08,416 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/Parser.py -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez 2026-04-30 05:16:08,417 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/Entrez/XSDs 2026-04-30 05:16:08,417 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/XSDs/NCBI_BlastOutput2.mod.xsd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/XSDs 2026-04-30 05:16:08,417 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/XSDs/NCBI_BlastOutput2.xsd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/XSDs 2026-04-30 05:16:08,417 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/XSDs/IPGReportSet.xsd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/XSDs 2026-04-30 05:16:08,418 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/SVDSuperimposer 2026-04-30 05:16:08,418 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SVDSuperimposer/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/SVDSuperimposer 2026-04-30 05:16:08,419 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/Cluster 2026-04-30 05:16:08,419 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Cluster/cluster.c -> build/bdist.linux-loongarch64/wheel/./Bio/Cluster 2026-04-30 05:16:08,419 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Cluster/clustermodule.c -> build/bdist.linux-loongarch64/wheel/./Bio/Cluster 2026-04-30 05:16:08,420 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Cluster/_cluster.cpython-314-loongarch64-linux-musl.so -> build/bdist.linux-loongarch64/wheel/./Bio/Cluster 2026-04-30 05:16:08,420 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Cluster/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/Cluster 2026-04-30 05:16:08,421 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Cluster/cluster.h -> build/bdist.linux-loongarch64/wheel/./Bio/Cluster 2026-04-30 05:16:08,421 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/Nexus 2026-04-30 05:16:08,421 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Nexus/cnexus.c -> build/bdist.linux-loongarch64/wheel/./Bio/Nexus 2026-04-30 05:16:08,422 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Nexus/Trees.py -> build/bdist.linux-loongarch64/wheel/./Bio/Nexus 2026-04-30 05:16:08,422 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Nexus/Nodes.py -> build/bdist.linux-loongarch64/wheel/./Bio/Nexus 2026-04-30 05:16:08,423 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Nexus/StandardData.py -> build/bdist.linux-loongarch64/wheel/./Bio/Nexus 2026-04-30 05:16:08,423 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Nexus/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/Nexus 2026-04-30 05:16:08,423 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Nexus/Nexus.py -> build/bdist.linux-loongarch64/wheel/./Bio/Nexus 2026-04-30 05:16:08,424 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Nexus/cnexus.cpython-314-loongarch64-linux-musl.so -> build/bdist.linux-loongarch64/wheel/./Bio/Nexus 2026-04-30 05:16:08,424 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Seq.py -> build/bdist.linux-loongarch64/wheel/./Bio 2026-04-30 05:16:08,425 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/Data 2026-04-30 05:16:08,425 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Data/IUPACData.py -> build/bdist.linux-loongarch64/wheel/./Bio/Data 2026-04-30 05:16:08,425 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Data/PDBData.py -> build/bdist.linux-loongarch64/wheel/./Bio/Data 2026-04-30 05:16:08,426 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Data/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/Data 2026-04-30 05:16:08,426 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Data/CodonTable.py -> build/bdist.linux-loongarch64/wheel/./Bio/Data 2026-04-30 05:16:08,426 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/bgzf.py -> build/bdist.linux-loongarch64/wheel/./Bio 2026-04-30 05:16:08,427 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/KEGG 2026-04-30 05:16:08,427 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/KEGG/Compound 2026-04-30 05:16:08,427 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/KEGG/Compound/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/KEGG/Compound 2026-04-30 05:16:08,428 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/KEGG/Gene 2026-04-30 05:16:08,428 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/KEGG/Gene/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/KEGG/Gene 2026-04-30 05:16:08,429 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/KEGG/Map 2026-04-30 05:16:08,429 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/KEGG/Map/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/KEGG/Map 2026-04-30 05:16:08,429 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/KEGG/Enzyme 2026-04-30 05:16:08,429 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/KEGG/Enzyme/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/KEGG/Enzyme 2026-04-30 05:16:08,430 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/KEGG/REST.py -> build/bdist.linux-loongarch64/wheel/./Bio/KEGG 2026-04-30 05:16:08,430 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/KEGG/KGML 2026-04-30 05:16:08,430 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/KEGG/KGML/KGML_pathway.py -> build/bdist.linux-loongarch64/wheel/./Bio/KEGG/KGML 2026-04-30 05:16:08,431 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/KEGG/KGML/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/KEGG/KGML 2026-04-30 05:16:08,431 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/KEGG/KGML/KGML_parser.py -> build/bdist.linux-loongarch64/wheel/./Bio/KEGG/KGML 2026-04-30 05:16:08,432 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/KEGG/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/KEGG 2026-04-30 05:16:08,432 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/Graphics 2026-04-30 05:16:08,432 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Graphics/Comparative.py -> build/bdist.linux-loongarch64/wheel/./Bio/Graphics 2026-04-30 05:16:08,433 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/Graphics/GenomeDiagram 2026-04-30 05:16:08,433 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Graphics/GenomeDiagram/_LinearDrawer.py -> build/bdist.linux-loongarch64/wheel/./Bio/Graphics/GenomeDiagram 2026-04-30 05:16:08,433 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Graphics/GenomeDiagram/_Colors.py -> build/bdist.linux-loongarch64/wheel/./Bio/Graphics/GenomeDiagram 2026-04-30 05:16:08,434 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Graphics/GenomeDiagram/_AbstractDrawer.py -> build/bdist.linux-loongarch64/wheel/./Bio/Graphics/GenomeDiagram 2026-04-30 05:16:08,434 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Graphics/GenomeDiagram/_CrossLink.py -> build/bdist.linux-loongarch64/wheel/./Bio/Graphics/GenomeDiagram 2026-04-30 05:16:08,434 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Graphics/GenomeDiagram/_CircularDrawer.py -> build/bdist.linux-loongarch64/wheel/./Bio/Graphics/GenomeDiagram 2026-04-30 05:16:08,435 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Graphics/GenomeDiagram/_GraphSet.py -> build/bdist.linux-loongarch64/wheel/./Bio/Graphics/GenomeDiagram 2026-04-30 05:16:08,435 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Graphics/GenomeDiagram/_Graph.py -> build/bdist.linux-loongarch64/wheel/./Bio/Graphics/GenomeDiagram 2026-04-30 05:16:08,435 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Graphics/GenomeDiagram/_Track.py -> build/bdist.linux-loongarch64/wheel/./Bio/Graphics/GenomeDiagram 2026-04-30 05:16:08,436 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Graphics/GenomeDiagram/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/Graphics/GenomeDiagram 2026-04-30 05:16:08,436 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Graphics/GenomeDiagram/_Diagram.py -> build/bdist.linux-loongarch64/wheel/./Bio/Graphics/GenomeDiagram 2026-04-30 05:16:08,437 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Graphics/GenomeDiagram/_Feature.py -> build/bdist.linux-loongarch64/wheel/./Bio/Graphics/GenomeDiagram 2026-04-30 05:16:08,437 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Graphics/GenomeDiagram/_FeatureSet.py -> build/bdist.linux-loongarch64/wheel/./Bio/Graphics/GenomeDiagram 2026-04-30 05:16:08,437 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Graphics/KGML_vis.py -> build/bdist.linux-loongarch64/wheel/./Bio/Graphics 2026-04-30 05:16:08,438 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Graphics/BasicChromosome.py -> build/bdist.linux-loongarch64/wheel/./Bio/Graphics 2026-04-30 05:16:08,438 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Graphics/DisplayRepresentation.py -> build/bdist.linux-loongarch64/wheel/./Bio/Graphics 2026-04-30 05:16:08,438 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Graphics/ColorSpiral.py -> build/bdist.linux-loongarch64/wheel/./Bio/Graphics 2026-04-30 05:16:08,439 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Graphics/Distribution.py -> build/bdist.linux-loongarch64/wheel/./Bio/Graphics 2026-04-30 05:16:08,439 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Graphics/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/Graphics 2026-04-30 05:16:08,439 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/Affy 2026-04-30 05:16:08,440 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Affy/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/Affy 2026-04-30 05:16:08,440 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Affy/CelFile.py -> build/bdist.linux-loongarch64/wheel/./Bio/Affy 2026-04-30 05:16:08,440 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/HMM 2026-04-30 05:16:08,441 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/HMM/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/HMM 2026-04-30 05:16:08,441 root INFO creating build/bdist.linux-loongarch64/wheel/BioSQL 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'usr/lib/python3.14/site-packages/Bio/PopGen/GenePop/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/PopGen/GenePop/__pycache__' 'usr/lib/python3.14/site-packages/Bio/PopGen/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/PopGen/__pycache__' 'usr/lib/python3.14/site-packages/Bio/NMR/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/NMR/__pycache__' 'usr/lib/python3.14/site-packages/Bio/ExPASy/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/ExPASy/__pycache__' 'usr/lib/python3.14/site-packages/Bio/AlignIO/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/AlignIO/__pycache__' 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'usr/lib/python3.14/site-packages/Bio/codonalign/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/codonalign/__pycache__' 'usr/lib/python3.14/site-packages/Bio/Sequencing/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/Sequencing/__pycache__' 'usr/lib/python3.14/site-packages/Bio/Pathway/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/Pathway/__pycache__' 'usr/lib/python3.14/site-packages/Bio/Pathway/Rep/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/Pathway/Rep/__pycache__' 'usr/lib/python3.14/site-packages/Bio/Compass/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/Compass/__pycache__' 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'usr/lib/python3.14/site-packages/Bio/KEGG/Gene/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/KEGG/Gene/__pycache__' 'usr/lib/python3.14/site-packages/Bio/KEGG/Map/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/KEGG/Map/__pycache__' 'usr/lib/python3.14/site-packages/Bio/KEGG/Enzyme/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/KEGG/Enzyme/__pycache__' 'usr/lib/python3.14/site-packages/Bio/KEGG/KGML/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/KEGG/KGML/__pycache__' 'usr/lib/python3.14/site-packages/Bio/Graphics/GenomeDiagram/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/Graphics/GenomeDiagram/__pycache__' 'usr/lib/python3.14/site-packages/Bio/Graphics/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/Graphics/__pycache__' 'usr/lib/python3.14/site-packages/Bio/Affy/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/Affy/__pycache__' 'usr/lib/python3.14/site-packages/Bio/HMM/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/HMM/__pycache__' 'usr/lib/python3.14/site-packages/BioSQL/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/BioSQL/__pycache__' >>> py3-biopython-pyc*: Preparing subpackage py3-biopython-pyc... Please specify at least one package name on the command line. >>> py3-biopython-pyc*: Running postcheck for py3-biopython-pyc >>> py3-biopython*: Running postcheck for py3-biopython >>> py3-biopython*: Preparing package py3-biopython... >>> py3-biopython*: Stripping binaries Please specify at least one package name on the command line. >>> py3-biopython*: Scanning shared objects >>> py3-biopython-pyc*: Tracing dependencies... python3~3.14 >>> py3-biopython-pyc*: Package size: 6.2 MB >>> py3-biopython-pyc*: Compressing data... >>> py3-biopython-pyc*: Create checksum... >>> py3-biopython-pyc*: Create py3-biopython-pyc-1.86-r1.apk >>> py3-biopython*: Tracing dependencies... py3-numpy python3 python3~3.14 so:libc.musl-loongarch64.so.1 >>> py3-biopython*: Package size: 11.4 MB >>> py3-biopython*: Compressing data... >>> py3-biopython*: Create checksum... >>> py3-biopython*: Create py3-biopython-1.86-r1.apk >>> py3-biopython: Build complete at Thu, 30 Apr 2026 05:16:13 +0000 elapsed time 0h 0m 38s >>> py3-biopython: Cleaning up srcdir >>> py3-biopython: Cleaning up pkgdir >>> py3-biopython: Cleaning up tmpdir >>> py3-biopython: Uninstalling dependencies... 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