>>> py3-biopython: Building community/py3-biopython 1.86-r1 (using abuild 3.16.0-r0) started Sun, 29 Mar 2026 19:10:07 +0000 >>> py3-biopython: Validating /home/buildozer/aports/community/py3-biopython/APKBUILD... >>> py3-biopython: Analyzing dependencies... >>> py3-biopython: Installing for build: build-base py3-numpy python3 py3-gpep517 py3-setuptools py3-wheel py3-numpy-dev python3-dev ( 1/31) Installing libbz2 (1.0.8-r6) ( 2/31) Installing libffi (3.5.2-r0) ( 3/31) Installing gdbm (1.26-r0) ( 4/31) Installing xz-libs (5.8.2-r0) ( 5/31) Installing mpdecimal (4.0.1-r0) ( 6/31) Installing libpanelw (6.6_p20251231-r0) ( 7/31) Installing sqlite-libs (3.51.2-r1) ( 8/31) Installing python3 (3.14.3-r0) ( 9/31) Installing python3-pycache-pyc0 (3.14.3-r0) (10/31) Installing pyc (3.14.3-r0) (11/31) Installing py3-numpy-pyc (2.4.3-r2) (12/31) Installing python3-pyc (3.14.3-r0) (13/31) Installing libgfortran (15.2.0-r2) (14/31) Installing openblas (0.3.30-r2) (15/31) Installing py3-numpy (2.4.3-r2) (16/31) Installing py3-numpy-tests (2.4.3-r2) (17/31) Installing py3-installer (0.7.0-r3) (18/31) Installing py3-installer-pyc (0.7.0-r3) (19/31) Installing py3-gpep517 (19-r2) (20/31) Installing py3-gpep517-pyc (19-r2) (21/31) Installing py3-parsing (3.3.2-r1) (22/31) Installing py3-parsing-pyc (3.3.2-r1) (23/31) Installing py3-packaging (26.0-r1) (24/31) Installing py3-packaging-pyc (26.0-r1) (25/31) Installing py3-setuptools (82.0.1-r1) (26/31) Installing py3-setuptools-pyc (82.0.1-r1) (27/31) Installing py3-wheel (0.46.3-r1) (28/31) Installing py3-wheel-pyc (0.46.3-r1) (29/31) Installing py3-numpy-dev (2.4.3-r2) (30/31) Installing python3-dev (3.14.3-r0) (31/31) Installing .makedepends-py3-biopython (20260329.191012) Executing busybox-1.37.0-r31.trigger OK: 646.7 MiB in 133 packages >>> py3-biopython: Cleaning up srcdir >>> py3-biopython: Cleaning up pkgdir >>> py3-biopython: Cleaning up tmpdir >>> py3-biopython: Fetching https://distfiles.alpinelinux.org/distfiles/edge/biopython-1.86.tar.gz /var/cache/distfiles/biopython-1.86.tar.gz: OK >>> py3-biopython: Fetching https://distfiles.alpinelinux.org/distfiles/edge/biopython-1.86.tar.gz /var/cache/distfiles/biopython-1.86.tar.gz: OK >>> py3-biopython: Unpacking /var/cache/distfiles/biopython-1.86.tar.gz... 2026-03-29 19:10:16,091 gpep517 INFO Building wheel via backend setuptools.build_meta:__legacy__ /usr/lib/python3.14/site-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: Freely Distributable See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! self._finalize_license_expression() 2026-03-29 19:10:16,123 root INFO running bdist_wheel 2026-03-29 19:10:16,144 root INFO running build 2026-03-29 19:10:16,144 root INFO running build_py 2026-03-29 19:10:16,149 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio 2026-03-29 19:10:16,150 root INFO copying Bio/pairwise2.py -> build/lib.linux-loongarch64-cpython-314/Bio 2026-03-29 19:10:16,150 root INFO copying Bio/SeqRecord.py -> build/lib.linux-loongarch64-cpython-314/Bio 2026-03-29 19:10:16,151 root INFO copying Bio/_utils.py -> build/lib.linux-loongarch64-cpython-314/Bio 2026-03-29 19:10:16,151 root INFO copying Bio/SeqFeature.py -> build/lib.linux-loongarch64-cpython-314/Bio 2026-03-29 19:10:16,152 root INFO copying Bio/File.py -> build/lib.linux-loongarch64-cpython-314/Bio 2026-03-29 19:10:16,152 root INFO copying Bio/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio 2026-03-29 19:10:16,152 root INFO copying Bio/Seq.py -> build/lib.linux-loongarch64-cpython-314/Bio 2026-03-29 19:10:16,153 root INFO copying Bio/bgzf.py -> build/lib.linux-loongarch64-cpython-314/Bio 2026-03-29 19:10:16,154 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/Affy 2026-03-29 19:10:16,154 root INFO copying Bio/Affy/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/Affy 2026-03-29 19:10:16,154 root INFO copying Bio/Affy/CelFile.py -> build/lib.linux-loongarch64-cpython-314/Bio/Affy 2026-03-29 19:10:16,155 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/Align 2026-03-29 19:10:16,155 root INFO copying Bio/Align/chain.py -> build/lib.linux-loongarch64-cpython-314/Bio/Align 2026-03-29 19:10:16,156 root INFO copying Bio/Align/AlignInfo.py -> build/lib.linux-loongarch64-cpython-314/Bio/Align 2026-03-29 19:10:16,156 root INFO copying Bio/Align/nexus.py -> build/lib.linux-loongarch64-cpython-314/Bio/Align 2026-03-29 19:10:16,156 root INFO copying Bio/Align/interfaces.py -> build/lib.linux-loongarch64-cpython-314/Bio/Align 2026-03-29 19:10:16,157 root INFO copying Bio/Align/exonerate.py -> build/lib.linux-loongarch64-cpython-314/Bio/Align 2026-03-29 19:10:16,157 root INFO copying Bio/Align/bigmaf.py -> build/lib.linux-loongarch64-cpython-314/Bio/Align 2026-03-29 19:10:16,158 root INFO copying Bio/Align/sam.py -> build/lib.linux-loongarch64-cpython-314/Bio/Align 2026-03-29 19:10:16,158 root INFO copying Bio/Align/bed.py -> build/lib.linux-loongarch64-cpython-314/Bio/Align 2026-03-29 19:10:16,158 root INFO copying Bio/Align/hhr.py -> build/lib.linux-loongarch64-cpython-314/Bio/Align 2026-03-29 19:10:16,159 root INFO copying Bio/Align/phylip.py -> build/lib.linux-loongarch64-cpython-314/Bio/Align 2026-03-29 19:10:16,159 root INFO copying Bio/Align/msf.py -> build/lib.linux-loongarch64-cpython-314/Bio/Align 2026-03-29 19:10:16,160 root INFO copying Bio/Align/bigbed.py -> build/lib.linux-loongarch64-cpython-314/Bio/Align 2026-03-29 19:10:16,160 root INFO copying Bio/Align/mauve.py -> build/lib.linux-loongarch64-cpython-314/Bio/Align 2026-03-29 19:10:16,161 root INFO copying Bio/Align/emboss.py -> build/lib.linux-loongarch64-cpython-314/Bio/Align 2026-03-29 19:10:16,161 root INFO copying Bio/Align/tabular.py -> build/lib.linux-loongarch64-cpython-314/Bio/Align 2026-03-29 19:10:16,161 root INFO copying Bio/Align/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/Align 2026-03-29 19:10:16,162 root INFO copying Bio/Align/analysis.py -> build/lib.linux-loongarch64-cpython-314/Bio/Align 2026-03-29 19:10:16,162 root INFO copying Bio/Align/psl.py -> build/lib.linux-loongarch64-cpython-314/Bio/Align 2026-03-29 19:10:16,163 root INFO copying Bio/Align/bigpsl.py -> build/lib.linux-loongarch64-cpython-314/Bio/Align 2026-03-29 19:10:16,163 root INFO copying Bio/Align/clustal.py -> build/lib.linux-loongarch64-cpython-314/Bio/Align 2026-03-29 19:10:16,164 root INFO copying Bio/Align/a2m.py -> build/lib.linux-loongarch64-cpython-314/Bio/Align 2026-03-29 19:10:16,164 root INFO copying Bio/Align/stockholm.py -> build/lib.linux-loongarch64-cpython-314/Bio/Align 2026-03-29 19:10:16,164 root INFO copying Bio/Align/fasta.py -> build/lib.linux-loongarch64-cpython-314/Bio/Align 2026-03-29 19:10:16,165 root INFO copying Bio/Align/maf.py -> build/lib.linux-loongarch64-cpython-314/Bio/Align 2026-03-29 19:10:16,165 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices 2026-03-29 19:10:16,166 root INFO copying Bio/Align/substitution_matrices/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices 2026-03-29 19:10:16,166 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/AlignIO 2026-03-29 19:10:16,167 root INFO copying Bio/AlignIO/MsfIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/AlignIO 2026-03-29 19:10:16,167 root INFO copying Bio/AlignIO/EmbossIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/AlignIO 2026-03-29 19:10:16,167 root INFO copying Bio/AlignIO/StockholmIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/AlignIO 2026-03-29 19:10:16,168 root INFO copying Bio/AlignIO/ClustalIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/AlignIO 2026-03-29 19:10:16,168 root INFO copying Bio/AlignIO/MafIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/AlignIO 2026-03-29 19:10:16,169 root INFO copying Bio/AlignIO/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/AlignIO 2026-03-29 19:10:16,169 root INFO copying Bio/AlignIO/FastaIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/AlignIO 2026-03-29 19:10:16,169 root INFO copying Bio/AlignIO/PhylipIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/AlignIO 2026-03-29 19:10:16,170 root INFO copying Bio/AlignIO/MauveIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/AlignIO 2026-03-29 19:10:16,170 root INFO copying Bio/AlignIO/NexusIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/AlignIO 2026-03-29 19:10:16,171 root INFO copying Bio/AlignIO/Interfaces.py -> build/lib.linux-loongarch64-cpython-314/Bio/AlignIO 2026-03-29 19:10:16,171 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/Alphabet 2026-03-29 19:10:16,171 root INFO copying Bio/Alphabet/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/Alphabet 2026-03-29 19:10:16,172 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/Blast 2026-03-29 19:10:16,172 root INFO copying Bio/Blast/_writers.py -> build/lib.linux-loongarch64-cpython-314/Bio/Blast 2026-03-29 19:10:16,172 root INFO copying Bio/Blast/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/Blast 2026-03-29 19:10:16,173 root INFO copying Bio/Blast/NCBIWWW.py -> build/lib.linux-loongarch64-cpython-314/Bio/Blast 2026-03-29 19:10:16,173 root INFO copying Bio/Blast/NCBIXML.py -> build/lib.linux-loongarch64-cpython-314/Bio/Blast 2026-03-29 19:10:16,174 root INFO copying Bio/Blast/_parser.py -> build/lib.linux-loongarch64-cpython-314/Bio/Blast 2026-03-29 19:10:16,174 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/CAPS 2026-03-29 19:10:16,175 root INFO copying Bio/CAPS/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/CAPS 2026-03-29 19:10:16,175 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/Cluster 2026-03-29 19:10:16,175 root INFO copying Bio/Cluster/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/Cluster 2026-03-29 19:10:16,176 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/codonalign 2026-03-29 19:10:16,176 root INFO copying Bio/codonalign/codonseq.py -> build/lib.linux-loongarch64-cpython-314/Bio/codonalign 2026-03-29 19:10:16,177 root INFO copying Bio/codonalign/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/codonalign 2026-03-29 19:10:16,177 root INFO copying Bio/codonalign/codonalignment.py -> build/lib.linux-loongarch64-cpython-314/Bio/codonalign 2026-03-29 19:10:16,177 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/Compass 2026-03-29 19:10:16,178 root INFO copying Bio/Compass/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/Compass 2026-03-29 19:10:16,178 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/Data 2026-03-29 19:10:16,178 root INFO copying Bio/Data/IUPACData.py -> build/lib.linux-loongarch64-cpython-314/Bio/Data 2026-03-29 19:10:16,179 root INFO copying Bio/Data/PDBData.py -> build/lib.linux-loongarch64-cpython-314/Bio/Data 2026-03-29 19:10:16,179 root INFO copying Bio/Data/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/Data 2026-03-29 19:10:16,180 root INFO copying Bio/Data/CodonTable.py -> build/lib.linux-loongarch64-cpython-314/Bio/Data 2026-03-29 19:10:16,180 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/Emboss 2026-03-29 19:10:16,180 root INFO copying Bio/Emboss/PrimerSearch.py -> build/lib.linux-loongarch64-cpython-314/Bio/Emboss 2026-03-29 19:10:16,181 root INFO copying Bio/Emboss/Primer3.py -> build/lib.linux-loongarch64-cpython-314/Bio/Emboss 2026-03-29 19:10:16,181 root INFO copying Bio/Emboss/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/Emboss 2026-03-29 19:10:16,182 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/Entrez 2026-03-29 19:10:16,182 root INFO copying Bio/Entrez/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez 2026-03-29 19:10:16,182 root INFO copying Bio/Entrez/Parser.py -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez 2026-03-29 19:10:16,184 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/ExPASy 2026-03-29 19:10:16,184 root INFO copying Bio/ExPASy/ScanProsite.py -> build/lib.linux-loongarch64-cpython-314/Bio/ExPASy 2026-03-29 19:10:16,184 root INFO copying Bio/ExPASy/Prodoc.py -> build/lib.linux-loongarch64-cpython-314/Bio/ExPASy 2026-03-29 19:10:16,185 root INFO copying Bio/ExPASy/Prosite.py -> build/lib.linux-loongarch64-cpython-314/Bio/ExPASy 2026-03-29 19:10:16,185 root INFO copying Bio/ExPASy/Enzyme.py -> build/lib.linux-loongarch64-cpython-314/Bio/ExPASy 2026-03-29 19:10:16,186 root INFO copying Bio/ExPASy/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/ExPASy 2026-03-29 19:10:16,186 root INFO copying Bio/ExPASy/cellosaurus.py -> build/lib.linux-loongarch64-cpython-314/Bio/ExPASy 2026-03-29 19:10:16,186 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/GenBank 2026-03-29 19:10:16,187 root INFO copying Bio/GenBank/utils.py -> build/lib.linux-loongarch64-cpython-314/Bio/GenBank 2026-03-29 19:10:16,187 root INFO copying Bio/GenBank/Record.py -> build/lib.linux-loongarch64-cpython-314/Bio/GenBank 2026-03-29 19:10:16,187 root INFO copying Bio/GenBank/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/GenBank 2026-03-29 19:10:16,188 root INFO copying Bio/GenBank/Scanner.py -> build/lib.linux-loongarch64-cpython-314/Bio/GenBank 2026-03-29 19:10:16,189 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/Geo 2026-03-29 19:10:16,189 root INFO copying Bio/Geo/Record.py -> build/lib.linux-loongarch64-cpython-314/Bio/Geo 2026-03-29 19:10:16,189 root INFO copying Bio/Geo/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/Geo 2026-03-29 19:10:16,190 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/Graphics 2026-03-29 19:10:16,190 root INFO copying Bio/Graphics/Comparative.py -> build/lib.linux-loongarch64-cpython-314/Bio/Graphics 2026-03-29 19:10:16,190 root INFO copying Bio/Graphics/KGML_vis.py -> build/lib.linux-loongarch64-cpython-314/Bio/Graphics 2026-03-29 19:10:16,191 root INFO copying Bio/Graphics/BasicChromosome.py -> build/lib.linux-loongarch64-cpython-314/Bio/Graphics 2026-03-29 19:10:16,191 root INFO copying Bio/Graphics/DisplayRepresentation.py -> build/lib.linux-loongarch64-cpython-314/Bio/Graphics 2026-03-29 19:10:16,192 root INFO copying Bio/Graphics/ColorSpiral.py -> build/lib.linux-loongarch64-cpython-314/Bio/Graphics 2026-03-29 19:10:16,192 root INFO copying Bio/Graphics/Distribution.py -> build/lib.linux-loongarch64-cpython-314/Bio/Graphics 2026-03-29 19:10:16,192 root INFO copying Bio/Graphics/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/Graphics 2026-03-29 19:10:16,193 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/Graphics/GenomeDiagram 2026-03-29 19:10:16,193 root INFO copying Bio/Graphics/GenomeDiagram/_LinearDrawer.py -> build/lib.linux-loongarch64-cpython-314/Bio/Graphics/GenomeDiagram 2026-03-29 19:10:16,194 root INFO copying Bio/Graphics/GenomeDiagram/_Colors.py -> build/lib.linux-loongarch64-cpython-314/Bio/Graphics/GenomeDiagram 2026-03-29 19:10:16,194 root INFO copying Bio/Graphics/GenomeDiagram/_AbstractDrawer.py -> build/lib.linux-loongarch64-cpython-314/Bio/Graphics/GenomeDiagram 2026-03-29 19:10:16,194 root INFO copying Bio/Graphics/GenomeDiagram/_CrossLink.py -> build/lib.linux-loongarch64-cpython-314/Bio/Graphics/GenomeDiagram 2026-03-29 19:10:16,195 root INFO copying Bio/Graphics/GenomeDiagram/_CircularDrawer.py -> build/lib.linux-loongarch64-cpython-314/Bio/Graphics/GenomeDiagram 2026-03-29 19:10:16,195 root INFO copying Bio/Graphics/GenomeDiagram/_GraphSet.py -> build/lib.linux-loongarch64-cpython-314/Bio/Graphics/GenomeDiagram 2026-03-29 19:10:16,196 root INFO copying Bio/Graphics/GenomeDiagram/_Graph.py -> build/lib.linux-loongarch64-cpython-314/Bio/Graphics/GenomeDiagram 2026-03-29 19:10:16,196 root INFO copying Bio/Graphics/GenomeDiagram/_Track.py -> build/lib.linux-loongarch64-cpython-314/Bio/Graphics/GenomeDiagram 2026-03-29 19:10:16,196 root INFO copying Bio/Graphics/GenomeDiagram/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/Graphics/GenomeDiagram 2026-03-29 19:10:16,197 root INFO copying Bio/Graphics/GenomeDiagram/_Diagram.py -> build/lib.linux-loongarch64-cpython-314/Bio/Graphics/GenomeDiagram 2026-03-29 19:10:16,197 root INFO copying Bio/Graphics/GenomeDiagram/_Feature.py -> build/lib.linux-loongarch64-cpython-314/Bio/Graphics/GenomeDiagram 2026-03-29 19:10:16,198 root INFO copying Bio/Graphics/GenomeDiagram/_FeatureSet.py -> build/lib.linux-loongarch64-cpython-314/Bio/Graphics/GenomeDiagram 2026-03-29 19:10:16,198 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/HMM 2026-03-29 19:10:16,198 root INFO copying Bio/HMM/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/HMM 2026-03-29 19:10:16,199 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/KEGG 2026-03-29 19:10:16,199 root INFO copying Bio/KEGG/REST.py -> build/lib.linux-loongarch64-cpython-314/Bio/KEGG 2026-03-29 19:10:16,199 root INFO copying Bio/KEGG/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/KEGG 2026-03-29 19:10:16,200 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/KEGG/Compound 2026-03-29 19:10:16,200 root INFO copying Bio/KEGG/Compound/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/KEGG/Compound 2026-03-29 19:10:16,201 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/KEGG/Enzyme 2026-03-29 19:10:16,201 root INFO copying Bio/KEGG/Enzyme/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/KEGG/Enzyme 2026-03-29 19:10:16,201 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/KEGG/Gene 2026-03-29 19:10:16,202 root INFO copying Bio/KEGG/Gene/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/KEGG/Gene 2026-03-29 19:10:16,202 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/KEGG/Map 2026-03-29 19:10:16,202 root INFO copying Bio/KEGG/Map/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/KEGG/Map 2026-03-29 19:10:16,203 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/PDB/mmtf 2026-03-29 19:10:16,203 root INFO copying Bio/PDB/mmtf/DefaultParser.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB/mmtf 2026-03-29 19:10:16,204 root INFO copying Bio/PDB/mmtf/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB/mmtf 2026-03-29 19:10:16,204 root INFO copying Bio/PDB/mmtf/mmtfio.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB/mmtf 2026-03-29 19:10:16,204 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/KEGG/KGML 2026-03-29 19:10:16,205 root INFO copying Bio/KEGG/KGML/KGML_pathway.py -> build/lib.linux-loongarch64-cpython-314/Bio/KEGG/KGML 2026-03-29 19:10:16,205 root INFO copying Bio/KEGG/KGML/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/KEGG/KGML 2026-03-29 19:10:16,205 root INFO copying Bio/KEGG/KGML/KGML_parser.py -> build/lib.linux-loongarch64-cpython-314/Bio/KEGG/KGML 2026-03-29 19:10:16,206 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/Medline 2026-03-29 19:10:16,206 root INFO copying Bio/Medline/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/Medline 2026-03-29 19:10:16,207 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/motifs 2026-03-29 19:10:16,207 root INFO copying Bio/motifs/thresholds.py -> build/lib.linux-loongarch64-cpython-314/Bio/motifs 2026-03-29 19:10:16,207 root INFO copying Bio/motifs/clusterbuster.py -> build/lib.linux-loongarch64-cpython-314/Bio/motifs 2026-03-29 19:10:16,208 root INFO copying Bio/motifs/matrix.py -> build/lib.linux-loongarch64-cpython-314/Bio/motifs 2026-03-29 19:10:16,208 root INFO copying Bio/motifs/meme.py -> build/lib.linux-loongarch64-cpython-314/Bio/motifs 2026-03-29 19:10:16,209 root INFO copying Bio/motifs/mast.py -> build/lib.linux-loongarch64-cpython-314/Bio/motifs 2026-03-29 19:10:16,209 root INFO copying Bio/motifs/minimal.py -> build/lib.linux-loongarch64-cpython-314/Bio/motifs 2026-03-29 19:10:16,209 root INFO copying Bio/motifs/pfm.py -> build/lib.linux-loongarch64-cpython-314/Bio/motifs 2026-03-29 19:10:16,210 root INFO copying Bio/motifs/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/motifs 2026-03-29 19:10:16,210 root INFO copying Bio/motifs/xms.py -> build/lib.linux-loongarch64-cpython-314/Bio/motifs 2026-03-29 19:10:16,211 root INFO copying Bio/motifs/alignace.py -> build/lib.linux-loongarch64-cpython-314/Bio/motifs 2026-03-29 19:10:16,211 root INFO copying Bio/motifs/transfac.py -> build/lib.linux-loongarch64-cpython-314/Bio/motifs 2026-03-29 19:10:16,211 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/motifs/jaspar 2026-03-29 19:10:16,212 root INFO copying Bio/motifs/jaspar/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/motifs/jaspar 2026-03-29 19:10:16,212 root INFO copying Bio/motifs/jaspar/db.py -> build/lib.linux-loongarch64-cpython-314/Bio/motifs/jaspar 2026-03-29 19:10:16,213 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/Nexus 2026-03-29 19:10:16,213 root INFO copying Bio/Nexus/Trees.py -> build/lib.linux-loongarch64-cpython-314/Bio/Nexus 2026-03-29 19:10:16,213 root INFO copying Bio/Nexus/Nodes.py -> build/lib.linux-loongarch64-cpython-314/Bio/Nexus 2026-03-29 19:10:16,214 root INFO copying Bio/Nexus/StandardData.py -> build/lib.linux-loongarch64-cpython-314/Bio/Nexus 2026-03-29 19:10:16,214 root INFO copying Bio/Nexus/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/Nexus 2026-03-29 19:10:16,214 root INFO copying Bio/Nexus/Nexus.py -> build/lib.linux-loongarch64-cpython-314/Bio/Nexus 2026-03-29 19:10:16,215 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/NMR 2026-03-29 19:10:16,215 root INFO copying Bio/NMR/xpktools.py -> build/lib.linux-loongarch64-cpython-314/Bio/NMR 2026-03-29 19:10:16,216 root INFO copying Bio/NMR/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/NMR 2026-03-29 19:10:16,216 root INFO copying Bio/NMR/NOEtools.py -> build/lib.linux-loongarch64-cpython-314/Bio/NMR 2026-03-29 19:10:16,216 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/Pathway 2026-03-29 19:10:16,217 root INFO copying Bio/Pathway/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/Pathway 2026-03-29 19:10:16,217 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/Pathway/Rep 2026-03-29 19:10:16,217 root INFO copying Bio/Pathway/Rep/MultiGraph.py -> build/lib.linux-loongarch64-cpython-314/Bio/Pathway/Rep 2026-03-29 19:10:16,218 root INFO copying Bio/Pathway/Rep/Graph.py -> build/lib.linux-loongarch64-cpython-314/Bio/Pathway/Rep 2026-03-29 19:10:16,218 root INFO copying Bio/Pathway/Rep/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/Pathway/Rep 2026-03-29 19:10:16,219 root INFO copying Bio/PDB/Chain.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-03-29 19:10:16,219 root INFO copying Bio/PDB/parse_pdb_header.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-03-29 19:10:16,220 root INFO copying Bio/PDB/Structure.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-03-29 19:10:16,220 root INFO copying Bio/PDB/NACCESS.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-03-29 19:10:16,221 root INFO copying Bio/PDB/MMCIFParser.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-03-29 19:10:16,221 root INFO copying Bio/PDB/internal_coords.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-03-29 19:10:16,222 root INFO copying Bio/PDB/StructureAlignment.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-03-29 19:10:16,222 root INFO copying Bio/PDB/Polypeptide.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-03-29 19:10:16,222 root INFO copying Bio/PDB/StructureBuilder.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-03-29 19:10:16,223 root INFO copying Bio/PDB/Selection.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-03-29 19:10:16,223 root INFO copying Bio/PDB/PICIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-03-29 19:10:16,224 root INFO copying Bio/PDB/PDBMLParser.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-03-29 19:10:16,224 root INFO copying Bio/PDB/Dice.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-03-29 19:10:16,224 root INFO copying Bio/PDB/ic_rebuild.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-03-29 19:10:16,225 root INFO copying Bio/PDB/AbstractPropertyMap.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-03-29 19:10:16,225 root INFO copying Bio/PDB/cealign.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-03-29 19:10:16,226 root INFO copying Bio/PDB/DSSP.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-03-29 19:10:16,226 root INFO copying Bio/PDB/alphafold_db.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-03-29 19:10:16,226 root INFO copying Bio/PDB/HSExposure.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-03-29 19:10:16,227 root INFO copying Bio/PDB/PDBIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-03-29 19:10:16,227 root INFO copying Bio/PDB/Residue.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-03-29 19:10:16,228 root INFO copying Bio/PDB/ic_data.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-03-29 19:10:16,228 root INFO copying Bio/PDB/PSEA.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-03-29 19:10:16,229 root INFO copying Bio/PDB/FragmentMapper.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-03-29 19:10:16,229 root INFO copying Bio/PDB/vectors.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-03-29 19:10:16,229 root INFO copying Bio/PDB/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-03-29 19:10:16,230 root INFO copying Bio/PDB/MMCIF2Dict.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-03-29 19:10:16,230 root INFO copying Bio/PDB/mmcifio.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-03-29 19:10:16,230 root INFO copying Bio/PDB/binary_cif.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-03-29 19:10:16,231 root INFO copying Bio/PDB/NeighborSearch.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-03-29 19:10:16,231 root INFO copying Bio/PDB/Atom.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-03-29 19:10:16,232 root INFO copying Bio/PDB/ResidueDepth.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-03-29 19:10:16,232 root INFO copying Bio/PDB/PDBList.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-03-29 19:10:16,233 root INFO copying Bio/PDB/Model.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-03-29 19:10:16,233 root INFO copying Bio/PDB/Entity.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-03-29 19:10:16,233 root INFO copying Bio/PDB/PDBParser.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-03-29 19:10:16,234 root INFO copying Bio/PDB/Superimposer.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-03-29 19:10:16,234 root INFO copying Bio/PDB/qcprot.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-03-29 19:10:16,234 root INFO copying Bio/PDB/SCADIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-03-29 19:10:16,235 root INFO copying Bio/PDB/SASA.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-03-29 19:10:16,235 root INFO copying Bio/PDB/PDBExceptions.py -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-03-29 19:10:16,236 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/phenotype 2026-03-29 19:10:16,236 root INFO copying Bio/phenotype/phen_micro.py -> build/lib.linux-loongarch64-cpython-314/Bio/phenotype 2026-03-29 19:10:16,236 root INFO copying Bio/phenotype/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/phenotype 2026-03-29 19:10:16,237 root INFO copying Bio/phenotype/pm_fitting.py -> build/lib.linux-loongarch64-cpython-314/Bio/phenotype 2026-03-29 19:10:16,237 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/PopGen 2026-03-29 19:10:16,238 root INFO copying Bio/PopGen/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/PopGen 2026-03-29 19:10:16,238 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/PopGen/GenePop 2026-03-29 19:10:16,238 root INFO copying Bio/PopGen/GenePop/LargeFileParser.py -> build/lib.linux-loongarch64-cpython-314/Bio/PopGen/GenePop 2026-03-29 19:10:16,239 root INFO copying Bio/PopGen/GenePop/FileParser.py -> build/lib.linux-loongarch64-cpython-314/Bio/PopGen/GenePop 2026-03-29 19:10:16,239 root INFO copying Bio/PopGen/GenePop/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/PopGen/GenePop 2026-03-29 19:10:16,240 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/Restriction 2026-03-29 19:10:16,240 root INFO copying Bio/Restriction/PrintFormat.py -> build/lib.linux-loongarch64-cpython-314/Bio/Restriction 2026-03-29 19:10:16,240 root INFO copying Bio/Restriction/Restriction.py -> build/lib.linux-loongarch64-cpython-314/Bio/Restriction 2026-03-29 19:10:16,241 root INFO copying Bio/Restriction/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/Restriction 2026-03-29 19:10:16,241 root INFO copying Bio/Restriction/Restriction_Dictionary.py -> build/lib.linux-loongarch64-cpython-314/Bio/Restriction 2026-03-29 19:10:16,242 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/SCOP 2026-03-29 19:10:16,243 root INFO copying Bio/SCOP/Hie.py -> build/lib.linux-loongarch64-cpython-314/Bio/SCOP 2026-03-29 19:10:16,243 root INFO copying Bio/SCOP/Raf.py -> build/lib.linux-loongarch64-cpython-314/Bio/SCOP 2026-03-29 19:10:16,243 root INFO copying Bio/SCOP/Dom.py -> build/lib.linux-loongarch64-cpython-314/Bio/SCOP 2026-03-29 19:10:16,244 root INFO copying Bio/SCOP/Cla.py -> build/lib.linux-loongarch64-cpython-314/Bio/SCOP 2026-03-29 19:10:16,244 root INFO copying Bio/SCOP/Des.py -> build/lib.linux-loongarch64-cpython-314/Bio/SCOP 2026-03-29 19:10:16,244 root INFO copying Bio/SCOP/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/SCOP 2026-03-29 19:10:16,245 root INFO copying Bio/SCOP/Residues.py -> build/lib.linux-loongarch64-cpython-314/Bio/SCOP 2026-03-29 19:10:16,245 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/SearchIO 2026-03-29 19:10:16,246 root INFO copying Bio/SearchIO/_utils.py -> build/lib.linux-loongarch64-cpython-314/Bio/SearchIO 2026-03-29 19:10:16,246 root INFO copying Bio/SearchIO/_index.py -> build/lib.linux-loongarch64-cpython-314/Bio/SearchIO 2026-03-29 19:10:16,246 root INFO copying Bio/SearchIO/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/SearchIO 2026-03-29 19:10:16,247 root INFO copying Bio/SearchIO/FastaIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/SearchIO 2026-03-29 19:10:16,247 root INFO copying Bio/SearchIO/BlatIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/SearchIO 2026-03-29 19:10:16,248 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/_model 2026-03-29 19:10:16,248 root INFO copying Bio/SearchIO/_model/query.py -> build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/_model 2026-03-29 19:10:16,249 root INFO copying Bio/SearchIO/_model/_base.py -> build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/_model 2026-03-29 19:10:16,249 root INFO copying Bio/SearchIO/_model/hit.py -> build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/_model 2026-03-29 19:10:16,249 root INFO copying Bio/SearchIO/_model/hsp.py -> build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/_model 2026-03-29 19:10:16,250 root INFO copying Bio/SearchIO/_model/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/_model 2026-03-29 19:10:16,250 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/BlastIO 2026-03-29 19:10:16,250 root INFO copying Bio/SearchIO/BlastIO/blast_tab.py -> build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/BlastIO 2026-03-29 19:10:16,251 root INFO copying Bio/SearchIO/BlastIO/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/BlastIO 2026-03-29 19:10:16,251 root INFO copying Bio/SearchIO/BlastIO/blast_xml.py -> build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/BlastIO 2026-03-29 19:10:16,252 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/HHsuiteIO 2026-03-29 19:10:16,252 root INFO copying Bio/SearchIO/HHsuiteIO/hhsuite2_text.py -> build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/HHsuiteIO 2026-03-29 19:10:16,253 root INFO copying Bio/SearchIO/HHsuiteIO/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/HHsuiteIO 2026-03-29 19:10:16,253 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/HmmerIO 2026-03-29 19:10:16,253 root INFO copying Bio/SearchIO/HmmerIO/hmmer3_tab.py -> build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/HmmerIO 2026-03-29 19:10:16,254 root INFO copying Bio/SearchIO/HmmerIO/hmmer3_text.py -> build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/HmmerIO 2026-03-29 19:10:16,254 root INFO copying Bio/SearchIO/HmmerIO/_base.py -> build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/HmmerIO 2026-03-29 19:10:16,254 root INFO copying Bio/SearchIO/HmmerIO/hmmer3_domtab.py -> build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/HmmerIO 2026-03-29 19:10:16,255 root INFO copying Bio/SearchIO/HmmerIO/hmmer2_text.py -> build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/HmmerIO 2026-03-29 19:10:16,255 root INFO copying Bio/SearchIO/HmmerIO/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/HmmerIO 2026-03-29 19:10:16,256 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/InfernalIO 2026-03-29 19:10:16,256 root INFO copying Bio/SearchIO/InfernalIO/_base.py -> build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/InfernalIO 2026-03-29 19:10:16,256 root INFO copying Bio/SearchIO/InfernalIO/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/InfernalIO 2026-03-29 19:10:16,257 root INFO copying Bio/SearchIO/InfernalIO/infernal_tab.py -> build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/InfernalIO 2026-03-29 19:10:16,257 root INFO copying Bio/SearchIO/InfernalIO/infernal_text.py -> build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/InfernalIO 2026-03-29 19:10:16,258 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/ExonerateIO 2026-03-29 19:10:16,258 root INFO copying Bio/SearchIO/ExonerateIO/exonerate_vulgar.py -> build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/ExonerateIO 2026-03-29 19:10:16,258 root INFO copying Bio/SearchIO/ExonerateIO/exonerate_cigar.py -> build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/ExonerateIO 2026-03-29 19:10:16,259 root INFO copying Bio/SearchIO/ExonerateIO/_base.py -> build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/ExonerateIO 2026-03-29 19:10:16,259 root INFO copying Bio/SearchIO/ExonerateIO/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/ExonerateIO 2026-03-29 19:10:16,260 root INFO copying Bio/SearchIO/ExonerateIO/exonerate_text.py -> build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/ExonerateIO 2026-03-29 19:10:16,260 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/InterproscanIO 2026-03-29 19:10:16,260 root INFO copying Bio/SearchIO/InterproscanIO/interproscan_xml.py -> build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/InterproscanIO 2026-03-29 19:10:16,261 root INFO copying Bio/SearchIO/InterproscanIO/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/InterproscanIO 2026-03-29 19:10:16,261 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/SeqIO 2026-03-29 19:10:16,262 root INFO copying Bio/SeqIO/GfaIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/SeqIO 2026-03-29 19:10:16,262 root INFO copying Bio/SeqIO/SeqXmlIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/SeqIO 2026-03-29 19:10:16,262 root INFO copying Bio/SeqIO/AbiIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/SeqIO 2026-03-29 19:10:16,263 root INFO copying Bio/SeqIO/NibIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/SeqIO 2026-03-29 19:10:16,263 root INFO copying Bio/SeqIO/SwissIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/SeqIO 2026-03-29 19:10:16,264 root INFO copying Bio/SeqIO/TabIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/SeqIO 2026-03-29 19:10:16,264 root INFO copying Bio/SeqIO/PirIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/SeqIO 2026-03-29 19:10:16,264 root INFO copying Bio/SeqIO/SffIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/SeqIO 2026-03-29 19:10:16,265 root INFO copying Bio/SeqIO/IgIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/SeqIO 2026-03-29 19:10:16,265 root INFO copying Bio/SeqIO/InsdcIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/SeqIO 2026-03-29 19:10:16,266 root INFO copying Bio/SeqIO/_index.py -> build/lib.linux-loongarch64-cpython-314/Bio/SeqIO 2026-03-29 19:10:16,266 root INFO copying Bio/SeqIO/PdbIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/SeqIO 2026-03-29 19:10:16,267 root INFO copying Bio/SeqIO/UniprotIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/SeqIO 2026-03-29 19:10:16,267 root INFO copying Bio/SeqIO/XdnaIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/SeqIO 2026-03-29 19:10:16,267 root INFO copying Bio/SeqIO/SnapGeneIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/SeqIO 2026-03-29 19:10:16,268 root INFO copying Bio/SeqIO/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/SeqIO 2026-03-29 19:10:16,268 root INFO copying Bio/SeqIO/QualityIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/SeqIO 2026-03-29 19:10:16,269 root INFO copying Bio/SeqIO/GckIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/SeqIO 2026-03-29 19:10:16,269 root INFO copying Bio/SeqIO/PhdIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/SeqIO 2026-03-29 19:10:16,269 root INFO copying Bio/SeqIO/FastaIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/SeqIO 2026-03-29 19:10:16,270 root INFO copying Bio/SeqIO/TwoBitIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/SeqIO 2026-03-29 19:10:16,270 root INFO copying Bio/SeqIO/AceIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/SeqIO 2026-03-29 19:10:16,271 root INFO copying Bio/SeqIO/Interfaces.py -> build/lib.linux-loongarch64-cpython-314/Bio/SeqIO 2026-03-29 19:10:16,271 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/SeqUtils 2026-03-29 19:10:16,271 root INFO copying Bio/SeqUtils/IsoelectricPoint.py -> build/lib.linux-loongarch64-cpython-314/Bio/SeqUtils 2026-03-29 19:10:16,272 root INFO copying Bio/SeqUtils/ProtParam.py -> build/lib.linux-loongarch64-cpython-314/Bio/SeqUtils 2026-03-29 19:10:16,272 root INFO copying Bio/SeqUtils/MeltingTemp.py -> build/lib.linux-loongarch64-cpython-314/Bio/SeqUtils 2026-03-29 19:10:16,273 root INFO copying Bio/SeqUtils/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/SeqUtils 2026-03-29 19:10:16,273 root INFO copying Bio/SeqUtils/CheckSum.py -> build/lib.linux-loongarch64-cpython-314/Bio/SeqUtils 2026-03-29 19:10:16,273 root INFO copying Bio/SeqUtils/lcc.py -> build/lib.linux-loongarch64-cpython-314/Bio/SeqUtils 2026-03-29 19:10:16,274 root INFO copying Bio/SeqUtils/ProtParamData.py -> build/lib.linux-loongarch64-cpython-314/Bio/SeqUtils 2026-03-29 19:10:16,274 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/Sequencing 2026-03-29 19:10:16,275 root INFO copying Bio/Sequencing/Phd.py -> build/lib.linux-loongarch64-cpython-314/Bio/Sequencing 2026-03-29 19:10:16,275 root INFO copying Bio/Sequencing/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/Sequencing 2026-03-29 19:10:16,275 root INFO copying Bio/Sequencing/Ace.py -> build/lib.linux-loongarch64-cpython-314/Bio/Sequencing 2026-03-29 19:10:16,276 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/SVDSuperimposer 2026-03-29 19:10:16,276 root INFO copying Bio/SVDSuperimposer/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/SVDSuperimposer 2026-03-29 19:10:16,277 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/SwissProt 2026-03-29 19:10:16,277 root INFO copying Bio/SwissProt/KeyWList.py -> build/lib.linux-loongarch64-cpython-314/Bio/SwissProt 2026-03-29 19:10:16,277 root INFO copying Bio/SwissProt/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/SwissProt 2026-03-29 19:10:16,278 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/TogoWS 2026-03-29 19:10:16,278 root INFO copying Bio/TogoWS/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/TogoWS 2026-03-29 19:10:16,279 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/Phylo 2026-03-29 19:10:16,279 root INFO copying Bio/Phylo/NewickIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/Phylo 2026-03-29 19:10:16,279 root INFO copying Bio/Phylo/PhyloXML.py -> build/lib.linux-loongarch64-cpython-314/Bio/Phylo 2026-03-29 19:10:16,280 root INFO copying Bio/Phylo/_utils.py -> build/lib.linux-loongarch64-cpython-314/Bio/Phylo 2026-03-29 19:10:16,280 root INFO copying Bio/Phylo/NeXMLIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/Phylo 2026-03-29 19:10:16,281 root INFO copying Bio/Phylo/NeXML.py -> build/lib.linux-loongarch64-cpython-314/Bio/Phylo 2026-03-29 19:10:16,281 root INFO copying Bio/Phylo/Newick.py -> build/lib.linux-loongarch64-cpython-314/Bio/Phylo 2026-03-29 19:10:16,281 root INFO copying Bio/Phylo/BaseTree.py -> build/lib.linux-loongarch64-cpython-314/Bio/Phylo 2026-03-29 19:10:16,282 root INFO copying Bio/Phylo/TreeConstruction.py -> build/lib.linux-loongarch64-cpython-314/Bio/Phylo 2026-03-29 19:10:16,282 root INFO copying Bio/Phylo/PhyloXMLIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/Phylo 2026-03-29 19:10:16,283 root INFO copying Bio/Phylo/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/Phylo 2026-03-29 19:10:16,283 root INFO copying Bio/Phylo/Consensus.py -> build/lib.linux-loongarch64-cpython-314/Bio/Phylo 2026-03-29 19:10:16,283 root INFO copying Bio/Phylo/CDAOIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/Phylo 2026-03-29 19:10:16,284 root INFO copying Bio/Phylo/_cdao_owl.py -> build/lib.linux-loongarch64-cpython-314/Bio/Phylo 2026-03-29 19:10:16,284 root INFO copying Bio/Phylo/CDAO.py -> build/lib.linux-loongarch64-cpython-314/Bio/Phylo 2026-03-29 19:10:16,285 root INFO copying Bio/Phylo/_io.py -> build/lib.linux-loongarch64-cpython-314/Bio/Phylo 2026-03-29 19:10:16,285 root INFO copying Bio/Phylo/NexusIO.py -> build/lib.linux-loongarch64-cpython-314/Bio/Phylo 2026-03-29 19:10:16,286 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/Phylo/PAML 2026-03-29 19:10:16,286 root INFO copying Bio/Phylo/PAML/chi2.py -> build/lib.linux-loongarch64-cpython-314/Bio/Phylo/PAML 2026-03-29 19:10:16,286 root INFO copying Bio/Phylo/PAML/yn00.py -> build/lib.linux-loongarch64-cpython-314/Bio/Phylo/PAML 2026-03-29 19:10:16,287 root INFO copying Bio/Phylo/PAML/codeml.py -> build/lib.linux-loongarch64-cpython-314/Bio/Phylo/PAML 2026-03-29 19:10:16,287 root INFO copying Bio/Phylo/PAML/baseml.py -> build/lib.linux-loongarch64-cpython-314/Bio/Phylo/PAML 2026-03-29 19:10:16,287 root INFO copying Bio/Phylo/PAML/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/Phylo/PAML 2026-03-29 19:10:16,288 root INFO copying Bio/Phylo/PAML/_paml.py -> build/lib.linux-loongarch64-cpython-314/Bio/Phylo/PAML 2026-03-29 19:10:16,288 root INFO copying Bio/Phylo/PAML/_parse_codeml.py -> build/lib.linux-loongarch64-cpython-314/Bio/Phylo/PAML 2026-03-29 19:10:16,289 root INFO copying Bio/Phylo/PAML/_parse_baseml.py -> build/lib.linux-loongarch64-cpython-314/Bio/Phylo/PAML 2026-03-29 19:10:16,289 root INFO copying Bio/Phylo/PAML/_parse_yn00.py -> build/lib.linux-loongarch64-cpython-314/Bio/Phylo/PAML 2026-03-29 19:10:16,289 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/UniGene 2026-03-29 19:10:16,290 root INFO copying Bio/UniGene/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/UniGene 2026-03-29 19:10:16,290 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/UniProt 2026-03-29 19:10:16,290 root INFO copying Bio/UniProt/__init__.py -> build/lib.linux-loongarch64-cpython-314/Bio/UniProt 2026-03-29 19:10:16,291 root INFO copying Bio/UniProt/GOA.py -> build/lib.linux-loongarch64-cpython-314/Bio/UniProt 2026-03-29 19:10:16,291 root INFO creating build/lib.linux-loongarch64-cpython-314/BioSQL 2026-03-29 19:10:16,292 root INFO copying BioSQL/Loader.py -> build/lib.linux-loongarch64-cpython-314/BioSQL 2026-03-29 19:10:16,292 root INFO copying BioSQL/BioSeqDatabase.py -> build/lib.linux-loongarch64-cpython-314/BioSQL 2026-03-29 19:10:16,292 root INFO copying BioSQL/__init__.py -> build/lib.linux-loongarch64-cpython-314/BioSQL 2026-03-29 19:10:16,293 root INFO copying BioSQL/BioSeq.py -> build/lib.linux-loongarch64-cpython-314/BioSQL 2026-03-29 19:10:16,293 root INFO copying BioSQL/DBUtils.py -> build/lib.linux-loongarch64-cpython-314/BioSQL 2026-03-29 19:10:16,294 root INFO running egg_info 2026-03-29 19:10:16,297 root INFO writing biopython.egg-info/PKG-INFO 2026-03-29 19:10:16,298 root INFO writing dependency_links to biopython.egg-info/dependency_links.txt 2026-03-29 19:10:16,299 root INFO writing requirements to biopython.egg-info/requires.txt 2026-03-29 19:10:16,299 root INFO writing top-level names to biopython.egg-info/top_level.txt 2026-03-29 19:10:16,322 root INFO reading manifest file 'biopython.egg-info/SOURCES.txt' 2026-03-29 19:10:16,380 root INFO reading manifest template 'MANIFEST.in' 2026-03-29 19:10:16,486 root WARNING warning: no previously-included files found matching 'Doc/_build' 2026-03-29 19:10:16,493 root WARNING warning: no previously-included files found matching 'Tests/Gck/DGVC_GCK.zip' 2026-03-29 19:10:16,497 root WARNING warning: no previously-included files matching '*.pyc' found anywhere in distribution 2026-03-29 19:10:16,501 root WARNING warning: no previously-included files matching '*.pyo' found anywhere in distribution 2026-03-29 19:10:16,505 root WARNING warning: no previously-included files matching '*.py{}' found anywhere in distribution 2026-03-29 19:10:16,509 root WARNING warning: no previously-included files matching '*.py-e' found anywhere in distribution 2026-03-29 19:10:16,517 root WARNING warning: no previously-included files found matching 'Bio/Align/substitution_matrices/data/README.txt' 2026-03-29 19:10:16,517 root INFO adding license file 'LICENSE' 2026-03-29 19:10:16,517 root INFO adding license file 'LICENSE.rst' 2026-03-29 19:10:16,561 root INFO writing manifest file 'biopython.egg-info/SOURCES.txt' /usr/lib/python3.14/site-packages/setuptools/command/build_py.py:215: _Warning: Package 'Bio.Align.substitution_matrices' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'Bio.Align.substitution_matrices' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'Bio.Align.substitution_matrices' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'Bio.Align.substitution_matrices' to be distributed and are already explicitly excluding 'Bio.Align.substitution_matrices' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) 2026-03-29 19:10:16,593 root INFO copying Bio/cpairwise2module.c -> build/lib.linux-loongarch64-cpython-314/Bio 2026-03-29 19:10:16,593 root INFO copying Bio/py.typed -> build/lib.linux-loongarch64-cpython-314/Bio 2026-03-29 19:10:16,593 root INFO copying Bio/Align/_aligncore.c -> build/lib.linux-loongarch64-cpython-314/Bio/Align 2026-03-29 19:10:16,594 root INFO copying Bio/Align/_alignmentcounts.c -> build/lib.linux-loongarch64-cpython-314/Bio/Align 2026-03-29 19:10:16,594 root INFO copying Bio/Align/_codonaligner.c -> build/lib.linux-loongarch64-cpython-314/Bio/Align 2026-03-29 19:10:16,595 root INFO copying Bio/Align/_pairwisealigner.c -> build/lib.linux-loongarch64-cpython-314/Bio/Align 2026-03-29 19:10:16,596 root INFO copying Bio/Align/_pairwisealigner.h -> build/lib.linux-loongarch64-cpython-314/Bio/Align 2026-03-29 19:10:16,596 root INFO copying Bio/Align/substitution_matrices/_arraycore.c -> build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices 2026-03-29 19:10:16,596 root INFO copying Bio/Align/substitution_matrices/_arraycore.h -> build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices 2026-03-29 19:10:16,597 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data 2026-03-29 19:10:16,597 root INFO copying Bio/Align/substitution_matrices/data/BENNER22 -> build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data 2026-03-29 19:10:16,597 root INFO copying Bio/Align/substitution_matrices/data/BENNER6 -> build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data 2026-03-29 19:10:16,598 root INFO copying Bio/Align/substitution_matrices/data/BENNER74 -> build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data 2026-03-29 19:10:16,598 root INFO copying Bio/Align/substitution_matrices/data/BLASTN -> build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data 2026-03-29 19:10:16,599 root INFO copying Bio/Align/substitution_matrices/data/BLASTP -> build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data 2026-03-29 19:10:16,599 root INFO copying Bio/Align/substitution_matrices/data/BLOSUM45 -> build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data 2026-03-29 19:10:16,599 root INFO copying Bio/Align/substitution_matrices/data/BLOSUM50 -> build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data 2026-03-29 19:10:16,600 root INFO copying Bio/Align/substitution_matrices/data/BLOSUM62 -> build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data 2026-03-29 19:10:16,600 root INFO copying Bio/Align/substitution_matrices/data/BLOSUM80 -> build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data 2026-03-29 19:10:16,601 root INFO copying Bio/Align/substitution_matrices/data/BLOSUM90 -> build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data 2026-03-29 19:10:16,601 root INFO copying Bio/Align/substitution_matrices/data/DAYHOFF -> build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data 2026-03-29 19:10:16,601 root INFO copying Bio/Align/substitution_matrices/data/FENG -> build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data 2026-03-29 19:10:16,602 root INFO copying Bio/Align/substitution_matrices/data/GENETIC -> build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data 2026-03-29 19:10:16,602 root INFO copying Bio/Align/substitution_matrices/data/GONNET1992 -> build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data 2026-03-29 19:10:16,603 root INFO copying Bio/Align/substitution_matrices/data/HOXD70 -> build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data 2026-03-29 19:10:16,603 root INFO copying Bio/Align/substitution_matrices/data/JOHNSON -> build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data 2026-03-29 19:10:16,603 root INFO copying Bio/Align/substitution_matrices/data/JONES -> build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data 2026-03-29 19:10:16,604 root INFO copying Bio/Align/substitution_matrices/data/LEVIN -> build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data 2026-03-29 19:10:16,604 root INFO copying Bio/Align/substitution_matrices/data/MCLACHLAN -> build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data 2026-03-29 19:10:16,605 root INFO copying Bio/Align/substitution_matrices/data/MDM78 -> build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data 2026-03-29 19:10:16,605 root INFO copying Bio/Align/substitution_matrices/data/MEGABLAST -> build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data 2026-03-29 19:10:16,605 root INFO copying Bio/Align/substitution_matrices/data/NUC.4.4 -> build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data 2026-03-29 19:10:16,606 root INFO copying Bio/Align/substitution_matrices/data/PAM250 -> build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data 2026-03-29 19:10:16,606 root INFO copying Bio/Align/substitution_matrices/data/PAM30 -> build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data 2026-03-29 19:10:16,607 root INFO copying Bio/Align/substitution_matrices/data/PAM70 -> build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data 2026-03-29 19:10:16,607 root INFO copying Bio/Align/substitution_matrices/data/RAO -> build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data 2026-03-29 19:10:16,607 root INFO copying Bio/Align/substitution_matrices/data/RISLER -> build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data 2026-03-29 19:10:16,608 root INFO copying Bio/Align/substitution_matrices/data/SCHNEIDER -> build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data 2026-03-29 19:10:16,608 root INFO copying Bio/Align/substitution_matrices/data/STR -> build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data 2026-03-29 19:10:16,609 root INFO copying Bio/Align/substitution_matrices/data/TRANS -> build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data 2026-03-29 19:10:16,609 root INFO copying Bio/Cluster/cluster.c -> build/lib.linux-loongarch64-cpython-314/Bio/Cluster 2026-03-29 19:10:16,610 root INFO copying Bio/Cluster/cluster.h -> build/lib.linux-loongarch64-cpython-314/Bio/Cluster 2026-03-29 19:10:16,610 root INFO copying Bio/Cluster/clustermodule.c -> build/lib.linux-loongarch64-cpython-314/Bio/Cluster 2026-03-29 19:10:16,611 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,611 root INFO copying Bio/Entrez/DTDs/BITS-embedded-index2.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,611 root INFO copying Bio/Entrez/DTDs/BITS-question-answer2.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,612 root INFO copying Bio/Entrez/DTDs/Docsum_3_0.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,612 root INFO copying Bio/Entrez/DTDs/Docsum_3_0.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,613 root INFO copying Bio/Entrez/DTDs/Docsum_3_1.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,613 root INFO copying Bio/Entrez/DTDs/Docsum_3_1.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,613 root INFO copying Bio/Entrez/DTDs/Docsum_3_2.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,614 root INFO copying Bio/Entrez/DTDs/Docsum_3_2.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,614 root INFO copying Bio/Entrez/DTDs/Docsum_3_3.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,615 root INFO copying Bio/Entrez/DTDs/Docsum_3_3.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,615 root INFO copying Bio/Entrez/DTDs/Docsum_3_4.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,616 root INFO copying Bio/Entrez/DTDs/Docsum_3_4.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,616 root INFO copying Bio/Entrez/DTDs/EMBL_General.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,616 root INFO copying Bio/Entrez/DTDs/EMBL_General.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,617 root INFO copying Bio/Entrez/DTDs/GenBank_General.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,617 root INFO copying Bio/Entrez/DTDs/GenBank_General.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,618 root INFO copying Bio/Entrez/DTDs/HomoloGene.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,618 root INFO copying Bio/Entrez/DTDs/HomoloGene.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,618 root INFO copying Bio/Entrez/DTDs/INSD_INSDSeq.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,619 root INFO copying Bio/Entrez/DTDs/INSD_INSDSeq.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,619 root INFO copying Bio/Entrez/DTDs/JATS-XHTMLtablesetup1-3.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,620 root INFO copying Bio/Entrez/DTDs/JATS-ali-namespace1-3.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,620 root INFO copying Bio/Entrez/DTDs/JATS-archivearticle1-3-mathml3.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,621 root INFO copying Bio/Entrez/DTDs/JATS-archivecustom-classes1-3.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,621 root INFO copying Bio/Entrez/DTDs/JATS-archivecustom-mixes1-3.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,621 root INFO copying Bio/Entrez/DTDs/JATS-archivecustom-models1-3.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,622 root INFO copying Bio/Entrez/DTDs/JATS-archivecustom-modules1-3.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,622 root INFO copying Bio/Entrez/DTDs/JATS-articlemeta1-3.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,623 root INFO copying Bio/Entrez/DTDs/JATS-backmatter1-3.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,623 root INFO copying Bio/Entrez/DTDs/JATS-chars1-3.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,624 root INFO copying Bio/Entrez/DTDs/JATS-common-atts1-3.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,624 root INFO copying Bio/Entrez/DTDs/JATS-common1-3.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,625 root INFO copying Bio/Entrez/DTDs/JATS-default-classes1-3.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,625 root INFO copying Bio/Entrez/DTDs/JATS-default-mixes1-3.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,626 root INFO copying Bio/Entrez/DTDs/JATS-display1-3.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,626 root INFO copying Bio/Entrez/DTDs/JATS-format1-3.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,627 root INFO copying Bio/Entrez/DTDs/JATS-funding1-3.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,627 root INFO copying Bio/Entrez/DTDs/JATS-journalmeta1-3.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,628 root INFO copying Bio/Entrez/DTDs/JATS-link1-3.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,628 root INFO copying Bio/Entrez/DTDs/JATS-list1-3.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,629 root INFO copying Bio/Entrez/DTDs/JATS-math1-3.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,629 root INFO copying Bio/Entrez/DTDs/JATS-mathml3-mathmlsetup1-3.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,630 root INFO copying Bio/Entrez/DTDs/JATS-mathml3-modules1-3.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,630 root INFO copying Bio/Entrez/DTDs/JATS-modules1-3.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,630 root INFO copying Bio/Entrez/DTDs/JATS-nlmcitation1-3.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,631 root INFO copying Bio/Entrez/DTDs/JATS-notat1-3.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,631 root INFO copying Bio/Entrez/DTDs/JATS-para1-3.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,632 root INFO copying Bio/Entrez/DTDs/JATS-phrase1-3.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,632 root INFO copying Bio/Entrez/DTDs/JATS-references1-3.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,633 root INFO copying Bio/Entrez/DTDs/JATS-related-object1-3.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,633 root INFO copying Bio/Entrez/DTDs/JATS-section1-3.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,634 root INFO copying Bio/Entrez/DTDs/JATS-xmlspecchars1-3.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,634 root INFO copying Bio/Entrez/DTDs/MMDB.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,634 root INFO copying Bio/Entrez/DTDs/MMDB.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,635 root INFO copying Bio/Entrez/DTDs/MMDB_Chemical_graph.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,635 root INFO copying Bio/Entrez/DTDs/MMDB_Chemical_graph.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,636 root INFO copying Bio/Entrez/DTDs/MMDB_Features.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,636 root INFO copying Bio/Entrez/DTDs/MMDB_Features.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,636 root INFO copying Bio/Entrez/DTDs/MMDB_Structural_model.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,637 root INFO copying Bio/Entrez/DTDs/MMDB_Structural_model.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,637 root INFO copying Bio/Entrez/DTDs/NCBI_Access.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,638 root INFO copying Bio/Entrez/DTDs/NCBI_Access.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,638 root INFO copying Bio/Entrez/DTDs/NCBI_Biblio.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,638 root INFO copying Bio/Entrez/DTDs/NCBI_Biblio.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,639 root INFO copying Bio/Entrez/DTDs/NCBI_BioSource.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,639 root INFO copying Bio/Entrez/DTDs/NCBI_BioSource.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,640 root INFO copying Bio/Entrez/DTDs/NCBI_BioTree.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,640 root INFO copying Bio/Entrez/DTDs/NCBI_BioTree.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,640 root INFO copying Bio/Entrez/DTDs/NCBI_Blast4.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,641 root INFO copying Bio/Entrez/DTDs/NCBI_Blast4.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,641 root INFO copying Bio/Entrez/DTDs/NCBI_BlastDL.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,642 root INFO copying Bio/Entrez/DTDs/NCBI_BlastDL.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,642 root INFO copying Bio/Entrez/DTDs/NCBI_BlastOutput.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,642 root INFO copying Bio/Entrez/DTDs/NCBI_BlastOutput.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,643 root INFO copying Bio/Entrez/DTDs/NCBI_Cdd.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,643 root INFO copying Bio/Entrez/DTDs/NCBI_Cdd.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,644 root INFO copying Bio/Entrez/DTDs/NCBI_Cn3d.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,644 root INFO copying Bio/Entrez/DTDs/NCBI_Cn3d.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,645 root INFO copying Bio/Entrez/DTDs/NCBI_Entity.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,645 root INFO copying Bio/Entrez/DTDs/NCBI_Entrez2.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,645 root INFO copying Bio/Entrez/DTDs/NCBI_Entrez2.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,646 root INFO copying Bio/Entrez/DTDs/NCBI_Entrezgene.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,646 root INFO copying Bio/Entrez/DTDs/NCBI_Entrezgene.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,647 root INFO copying Bio/Entrez/DTDs/NCBI_FeatDef.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,647 root INFO copying Bio/Entrez/DTDs/NCBI_FeatDef.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,647 root INFO copying Bio/Entrez/DTDs/NCBI_GBSeq.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,648 root INFO copying Bio/Entrez/DTDs/NCBI_GBSeq.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,648 root INFO copying Bio/Entrez/DTDs/NCBI_Gene.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,649 root INFO copying Bio/Entrez/DTDs/NCBI_Gene.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,649 root INFO copying Bio/Entrez/DTDs/NCBI_General.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,649 root INFO copying Bio/Entrez/DTDs/NCBI_General.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,650 root INFO copying Bio/Entrez/DTDs/NCBI_ID1Access.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,650 root INFO copying Bio/Entrez/DTDs/NCBI_ID1Access.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,651 root INFO copying Bio/Entrez/DTDs/NCBI_ID2Access.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,651 root INFO copying Bio/Entrez/DTDs/NCBI_ID2Access.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,651 root INFO copying Bio/Entrez/DTDs/NCBI_MedArchive.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,652 root INFO copying Bio/Entrez/DTDs/NCBI_MedArchive.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,652 root INFO copying Bio/Entrez/DTDs/NCBI_Medlars.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,653 root INFO copying Bio/Entrez/DTDs/NCBI_Medlars.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,653 root INFO copying Bio/Entrez/DTDs/NCBI_Medline.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,653 root INFO copying Bio/Entrez/DTDs/NCBI_Medline.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,654 root INFO copying Bio/Entrez/DTDs/NCBI_Mim.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,654 root INFO copying Bio/Entrez/DTDs/NCBI_Mim.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,655 root INFO copying Bio/Entrez/DTDs/NCBI_Mime.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,655 root INFO copying Bio/Entrez/DTDs/NCBI_Mime.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,655 root INFO copying Bio/Entrez/DTDs/NCBI_ObjPrt.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,656 root INFO copying Bio/Entrez/DTDs/NCBI_ObjPrt.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,656 root INFO copying Bio/Entrez/DTDs/NCBI_Organism.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,657 root INFO copying Bio/Entrez/DTDs/NCBI_Organism.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,657 root INFO copying Bio/Entrez/DTDs/NCBI_PCAssay.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,657 root INFO copying Bio/Entrez/DTDs/NCBI_PCAssay.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,658 root INFO copying Bio/Entrez/DTDs/NCBI_PCSubstance.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,658 root INFO copying Bio/Entrez/DTDs/NCBI_PCSubstance.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,659 root INFO copying Bio/Entrez/DTDs/NCBI_Project.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,659 root INFO copying Bio/Entrez/DTDs/NCBI_Project.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,659 root INFO copying Bio/Entrez/DTDs/NCBI_Protein.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,660 root INFO copying Bio/Entrez/DTDs/NCBI_Protein.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,660 root INFO copying Bio/Entrez/DTDs/NCBI_Pub.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,661 root INFO copying Bio/Entrez/DTDs/NCBI_Pub.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,661 root INFO copying Bio/Entrez/DTDs/NCBI_PubMed.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,661 root INFO copying Bio/Entrez/DTDs/NCBI_PubMed.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,662 root INFO copying Bio/Entrez/DTDs/NCBI_RNA.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,662 root INFO copying Bio/Entrez/DTDs/NCBI_RNA.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,663 root INFO copying Bio/Entrez/DTDs/NCBI_Remap.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,663 root INFO copying Bio/Entrez/DTDs/NCBI_Remap.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,663 root INFO copying Bio/Entrez/DTDs/NCBI_Rsite.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,664 root INFO copying Bio/Entrez/DTDs/NCBI_Rsite.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,664 root INFO copying Bio/Entrez/DTDs/NCBI_ScoreMat.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,665 root INFO copying Bio/Entrez/DTDs/NCBI_ScoreMat.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,665 root INFO copying Bio/Entrez/DTDs/NCBI_SeqCode.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,665 root INFO copying Bio/Entrez/DTDs/NCBI_SeqCode.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,666 root INFO copying Bio/Entrez/DTDs/NCBI_SeqTable.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,666 root INFO copying Bio/Entrez/DTDs/NCBI_SeqTable.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,667 root INFO copying Bio/Entrez/DTDs/NCBI_Seq_split.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,667 root INFO copying Bio/Entrez/DTDs/NCBI_Seq_split.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,667 root INFO copying Bio/Entrez/DTDs/NCBI_Seqalign.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,668 root INFO copying Bio/Entrez/DTDs/NCBI_Seqalign.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,668 root INFO copying Bio/Entrez/DTDs/NCBI_Seqfeat.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,669 root INFO copying Bio/Entrez/DTDs/NCBI_Seqfeat.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,669 root INFO copying Bio/Entrez/DTDs/NCBI_Seqloc.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,669 root INFO copying Bio/Entrez/DTDs/NCBI_Seqloc.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,670 root INFO copying Bio/Entrez/DTDs/NCBI_Seqres.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,670 root INFO copying Bio/Entrez/DTDs/NCBI_Seqres.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,671 root INFO copying Bio/Entrez/DTDs/NCBI_Seqset.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,671 root INFO copying Bio/Entrez/DTDs/NCBI_Seqset.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,672 root INFO copying Bio/Entrez/DTDs/NCBI_Sequence.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,672 root INFO copying Bio/Entrez/DTDs/NCBI_Sequence.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,672 root INFO copying Bio/Entrez/DTDs/NCBI_Submit.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,673 root INFO copying Bio/Entrez/DTDs/NCBI_Submit.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,673 root INFO copying Bio/Entrez/DTDs/NCBI_Systems.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,674 root INFO copying Bio/Entrez/DTDs/NCBI_TSeq.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,674 root INFO copying Bio/Entrez/DTDs/NCBI_TSeq.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,674 root INFO copying Bio/Entrez/DTDs/NCBI_TxInit.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,675 root INFO copying Bio/Entrez/DTDs/NCBI_TxInit.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,675 root INFO copying Bio/Entrez/DTDs/NCBI_Variation.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,676 root INFO copying Bio/Entrez/DTDs/NCBI_Variation.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,676 root INFO copying Bio/Entrez/DTDs/NCBI_all.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,676 root INFO copying Bio/Entrez/DTDs/NSE.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,677 root INFO copying Bio/Entrez/DTDs/NSE.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,677 root INFO copying Bio/Entrez/DTDs/OMSSA.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,678 root INFO copying Bio/Entrez/DTDs/OMSSA.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,678 root INFO copying Bio/Entrez/DTDs/PDB_General.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,679 root INFO copying Bio/Entrez/DTDs/PDB_General.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,679 root INFO copying Bio/Entrez/DTDs/PIR_General.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,679 root INFO copying Bio/Entrez/DTDs/PIR_General.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,680 root INFO copying Bio/Entrez/DTDs/PRF_General.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,680 root INFO copying Bio/Entrez/DTDs/PRF_General.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,681 root INFO copying Bio/Entrez/DTDs/SP_General.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,681 root INFO copying Bio/Entrez/DTDs/SP_General.mod.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,681 root INFO copying Bio/Entrez/DTDs/XHTMLtablesetup.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,682 root INFO copying Bio/Entrez/DTDs/archivearticle.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,682 root INFO copying Bio/Entrez/DTDs/archivecustom-classes.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,683 root INFO copying Bio/Entrez/DTDs/archivecustom-mixes.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,683 root INFO copying Bio/Entrez/DTDs/archivecustom-models.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,684 root INFO copying Bio/Entrez/DTDs/archivecustom-modules.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,684 root INFO copying Bio/Entrez/DTDs/articlemeta.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,685 root INFO copying Bio/Entrez/DTDs/backmatter.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,685 root INFO copying Bio/Entrez/DTDs/bookdoc_100301.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,685 root INFO copying Bio/Entrez/DTDs/bookdoc_110101.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,686 root INFO copying Bio/Entrez/DTDs/bookdoc_120101.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,686 root INFO copying Bio/Entrez/DTDs/bookdoc_130101.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,687 root INFO copying Bio/Entrez/DTDs/bookdoc_140101.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,687 root INFO copying Bio/Entrez/DTDs/bookdoc_150101.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,687 root INFO copying Bio/Entrez/DTDs/chars.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,688 root INFO copying Bio/Entrez/DTDs/common.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,689 root INFO copying Bio/Entrez/DTDs/default-classes.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,689 root INFO copying Bio/Entrez/DTDs/default-mixes.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,689 root INFO copying Bio/Entrez/DTDs/display.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,690 root INFO copying Bio/Entrez/DTDs/eInfo_020511.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,690 root INFO copying Bio/Entrez/DTDs/eLink_090910.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,691 root INFO copying Bio/Entrez/DTDs/eLink_101123.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,691 root INFO copying Bio/Entrez/DTDs/ePost_020511.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,692 root INFO copying Bio/Entrez/DTDs/eSearch_020511.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,692 root INFO copying Bio/Entrez/DTDs/eSpell.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,692 root INFO copying Bio/Entrez/DTDs/eSummary_041029.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,693 root INFO copying Bio/Entrez/DTDs/egquery.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,693 root INFO copying Bio/Entrez/DTDs/einfo.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,694 root INFO copying Bio/Entrez/DTDs/elink.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,694 root INFO copying Bio/Entrez/DTDs/elink_020122.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,694 root INFO copying Bio/Entrez/DTDs/epost.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,695 root INFO copying Bio/Entrez/DTDs/esearch.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,695 root INFO copying Bio/Entrez/DTDs/esummary-v1.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,696 root INFO copying Bio/Entrez/DTDs/esummary_clinvar.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,696 root INFO copying Bio/Entrez/DTDs/esummary_gene.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,696 root INFO copying Bio/Entrez/DTDs/format.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,697 root INFO copying Bio/Entrez/DTDs/htmltable.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,697 root INFO copying Bio/Entrez/DTDs/isoamsa.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,698 root INFO copying Bio/Entrez/DTDs/isoamsb.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,698 root INFO copying Bio/Entrez/DTDs/isoamsc.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,698 root INFO copying Bio/Entrez/DTDs/isoamsn.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,699 root INFO copying Bio/Entrez/DTDs/isoamso.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,699 root INFO copying Bio/Entrez/DTDs/isoamsr.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,700 root INFO copying Bio/Entrez/DTDs/isobox.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,700 root INFO copying Bio/Entrez/DTDs/isocyr1.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,700 root INFO copying Bio/Entrez/DTDs/isocyr2.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,701 root INFO copying Bio/Entrez/DTDs/isodia.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,701 root INFO copying Bio/Entrez/DTDs/isogrk1.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,702 root INFO copying Bio/Entrez/DTDs/isogrk2.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,702 root INFO copying Bio/Entrez/DTDs/isogrk3.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,702 root INFO copying Bio/Entrez/DTDs/isogrk4.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,703 root INFO copying Bio/Entrez/DTDs/isolat1.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,703 root INFO copying Bio/Entrez/DTDs/isolat2.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,704 root INFO copying Bio/Entrez/DTDs/isomfrk.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,704 root INFO copying Bio/Entrez/DTDs/isomopf.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,704 root INFO copying Bio/Entrez/DTDs/isomscr.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,705 root INFO copying Bio/Entrez/DTDs/isonum.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,705 root INFO copying Bio/Entrez/DTDs/isopub.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,706 root INFO copying Bio/Entrez/DTDs/isotech.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,706 root INFO copying Bio/Entrez/DTDs/journalmeta.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,707 root INFO copying Bio/Entrez/DTDs/link.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,707 root INFO copying Bio/Entrez/DTDs/list.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,707 root INFO copying Bio/Entrez/DTDs/math.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,708 root INFO copying Bio/Entrez/DTDs/mathml-in-pubmed.mod -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,708 root INFO copying Bio/Entrez/DTDs/mathml2-qname-1.mod -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,709 root INFO copying Bio/Entrez/DTDs/mathml2.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,709 root INFO copying Bio/Entrez/DTDs/mathml3-qname1.mod -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,710 root INFO copying Bio/Entrez/DTDs/mathml3.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,710 root INFO copying Bio/Entrez/DTDs/mathmlsetup.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,710 root INFO copying Bio/Entrez/DTDs/mmlalias.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,711 root INFO copying Bio/Entrez/DTDs/mmlextra.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,711 root INFO copying Bio/Entrez/DTDs/modules.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,712 root INFO copying Bio/Entrez/DTDs/nlm-articleset-2.0.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,712 root INFO copying Bio/Entrez/DTDs/nlmcatalogrecordset_170601.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,713 root INFO copying Bio/Entrez/DTDs/nlmcommon_011101.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,713 root INFO copying Bio/Entrez/DTDs/nlmcommon_080101.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,713 root INFO copying Bio/Entrez/DTDs/nlmcommon_090101.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,714 root INFO copying Bio/Entrez/DTDs/nlmmedline_011101.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,714 root INFO copying Bio/Entrez/DTDs/nlmmedline_080101.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,715 root INFO copying Bio/Entrez/DTDs/nlmmedline_090101.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,715 root INFO copying Bio/Entrez/DTDs/nlmmedlinecitation_011101.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,715 root INFO copying Bio/Entrez/DTDs/nlmmedlinecitation_080101.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,716 root INFO copying Bio/Entrez/DTDs/nlmmedlinecitation_090101.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,716 root INFO copying Bio/Entrez/DTDs/nlmmedlinecitationset_100101.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,717 root INFO copying Bio/Entrez/DTDs/nlmmedlinecitationset_100301.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,717 root INFO copying Bio/Entrez/DTDs/nlmmedlinecitationset_110101.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,717 root INFO copying Bio/Entrez/DTDs/nlmmedlinecitationset_120101.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,718 root INFO copying Bio/Entrez/DTDs/nlmmedlinecitationset_130101.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,718 root INFO copying Bio/Entrez/DTDs/nlmmedlinecitationset_130501.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,719 root INFO copying Bio/Entrez/DTDs/nlmmedlinecitationset_140101.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,719 root INFO copying Bio/Entrez/DTDs/nlmmedlinecitationset_150101.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,719 root INFO copying Bio/Entrez/DTDs/nlmserials_080101.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,720 root INFO copying Bio/Entrez/DTDs/nlmserials_100101.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,720 root INFO copying Bio/Entrez/DTDs/nlmsharedcatcit_080101.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,721 root INFO copying Bio/Entrez/DTDs/nlmsharedcatcit_090101.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,721 root INFO copying Bio/Entrez/DTDs/notat.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,722 root INFO copying Bio/Entrez/DTDs/para.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,722 root INFO copying Bio/Entrez/DTDs/phrase.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,722 root INFO copying Bio/Entrez/DTDs/pmc-1.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,723 root INFO copying Bio/Entrez/DTDs/pubmed_020114.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,723 root INFO copying Bio/Entrez/DTDs/pubmed_080101.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,724 root INFO copying Bio/Entrez/DTDs/pubmed_090101.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,724 root INFO copying Bio/Entrez/DTDs/pubmed_100101.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,724 root INFO copying Bio/Entrez/DTDs/pubmed_100301.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,725 root INFO copying Bio/Entrez/DTDs/pubmed_110101.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,725 root INFO copying Bio/Entrez/DTDs/pubmed_120101.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,726 root INFO copying Bio/Entrez/DTDs/pubmed_130101.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,726 root INFO copying Bio/Entrez/DTDs/pubmed_130501.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,726 root INFO copying Bio/Entrez/DTDs/pubmed_140101.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,727 root INFO copying Bio/Entrez/DTDs/pubmed_150101.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,727 root INFO copying Bio/Entrez/DTDs/pubmed_180101.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,728 root INFO copying Bio/Entrez/DTDs/pubmed_180601.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,728 root INFO copying Bio/Entrez/DTDs/pubmed_190101.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,729 root INFO copying Bio/Entrez/DTDs/references.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,729 root INFO copying Bio/Entrez/DTDs/section.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,729 root INFO copying Bio/Entrez/DTDs/taxon.dtd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,730 root INFO copying Bio/Entrez/DTDs/xhtml-inlstyle-1.mod -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,730 root INFO copying Bio/Entrez/DTDs/xhtml-table-1.mod -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,731 root INFO copying Bio/Entrez/DTDs/xmlspecchars.ent -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs 2026-03-29 19:10:16,731 root INFO creating build/lib.linux-loongarch64-cpython-314/Bio/Entrez/XSDs 2026-03-29 19:10:16,731 root INFO copying Bio/Entrez/XSDs/IPGReportSet.xsd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/XSDs 2026-03-29 19:10:16,732 root INFO copying Bio/Entrez/XSDs/NCBI_BlastOutput2.mod.xsd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/XSDs 2026-03-29 19:10:16,732 root INFO copying Bio/Entrez/XSDs/NCBI_BlastOutput2.xsd -> build/lib.linux-loongarch64-cpython-314/Bio/Entrez/XSDs 2026-03-29 19:10:16,732 root INFO copying Bio/motifs/_pwm.c -> build/lib.linux-loongarch64-cpython-314/Bio/motifs 2026-03-29 19:10:16,733 root INFO copying Bio/Nexus/cnexus.c -> build/lib.linux-loongarch64-cpython-314/Bio/Nexus 2026-03-29 19:10:16,733 root INFO copying Bio/PDB/bcifhelpermodule.c -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-03-29 19:10:16,734 root INFO copying Bio/PDB/ccealignmodule.c -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-03-29 19:10:16,734 root INFO copying Bio/PDB/kdtrees.c -> build/lib.linux-loongarch64-cpython-314/Bio/PDB 2026-03-29 19:10:16,735 root INFO copying Bio/SeqIO/_twoBitIO.c -> build/lib.linux-loongarch64-cpython-314/Bio/SeqIO 2026-03-29 19:10:16,735 root INFO copying BioSQL/py.typed -> build/lib.linux-loongarch64-cpython-314/BioSQL 2026-03-29 19:10:16,743 root INFO running build_ext 2026-03-29 19:10:16,746 root INFO building 'Bio.Align._aligncore' extension 2026-03-29 19:10:16,747 root INFO creating build/temp.linux-loongarch64-cpython-314/Bio/Align 2026-03-29 19:10:16,747 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.14 -c Bio/Align/_aligncore.c -o build/temp.linux-loongarch64-cpython-314/Bio/Align/_aligncore.o 2026-03-29 19:10:17,131 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Wl,-z,pack-relative-relocs -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-loongarch64-cpython-314/Bio/Align/_aligncore.o -L/usr/lib -o build/lib.linux-loongarch64-cpython-314/Bio/Align/_aligncore.cpython-314-loongarch64-linux-musl.so 2026-03-29 19:10:17,147 root INFO building 'Bio.Align._alignmentcounts' extension 2026-03-29 19:10:17,148 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.14 -c Bio/Align/_alignmentcounts.c -o build/temp.linux-loongarch64-cpython-314/Bio/Align/_alignmentcounts.o 2026-03-29 19:10:18,337 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Wl,-z,pack-relative-relocs -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-loongarch64-cpython-314/Bio/Align/_alignmentcounts.o -L/usr/lib -o build/lib.linux-loongarch64-cpython-314/Bio/Align/_alignmentcounts.cpython-314-loongarch64-linux-musl.so 2026-03-29 19:10:18,354 root INFO building 'Bio.Align._codonaligner' extension 2026-03-29 19:10:18,355 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.14 -c Bio/Align/_codonaligner.c -o build/temp.linux-loongarch64-cpython-314/Bio/Align/_codonaligner.o 2026-03-29 19:10:19,196 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Wl,-z,pack-relative-relocs -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-loongarch64-cpython-314/Bio/Align/_codonaligner.o -L/usr/lib -o build/lib.linux-loongarch64-cpython-314/Bio/Align/_codonaligner.cpython-314-loongarch64-linux-musl.so 2026-03-29 19:10:19,212 root INFO building 'Bio.Align._pairwisealigner' extension 2026-03-29 19:10:19,213 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.14 -c Bio/Align/_pairwisealigner.c -o build/temp.linux-loongarch64-cpython-314/Bio/Align/_pairwisealigner.o 2026-03-29 19:10:29,233 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Wl,-z,pack-relative-relocs -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-loongarch64-cpython-314/Bio/Align/_pairwisealigner.o -L/usr/lib -o build/lib.linux-loongarch64-cpython-314/Bio/Align/_pairwisealigner.cpython-314-loongarch64-linux-musl.so 2026-03-29 19:10:29,257 root INFO building 'Bio.Align.substitution_matrices._arraycore' extension 2026-03-29 19:10:29,257 root INFO creating build/temp.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices 2026-03-29 19:10:29,257 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.14 -c Bio/Align//substitution_matrices/_arraycore.c -o build/temp.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/_arraycore.o 2026-03-29 19:10:29,563 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Wl,-z,pack-relative-relocs -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/_arraycore.o -L/usr/lib -o build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/_arraycore.cpython-314-loongarch64-linux-musl.so 2026-03-29 19:10:29,578 root INFO building 'Bio.cpairwise2' extension 2026-03-29 19:10:29,579 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.14 -c Bio/cpairwise2module.c -o build/temp.linux-loongarch64-cpython-314/Bio/cpairwise2module.o 2026-03-29 19:10:30,042 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Wl,-z,pack-relative-relocs -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-loongarch64-cpython-314/Bio/cpairwise2module.o -L/usr/lib -o build/lib.linux-loongarch64-cpython-314/Bio/cpairwise2.cpython-314-loongarch64-linux-musl.so 2026-03-29 19:10:30,057 root INFO building 'Bio.Nexus.cnexus' extension 2026-03-29 19:10:30,058 root INFO creating build/temp.linux-loongarch64-cpython-314/Bio/Nexus 2026-03-29 19:10:30,058 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.14 -c Bio/Nexus/cnexus.c -o build/temp.linux-loongarch64-cpython-314/Bio/Nexus/cnexus.o 2026-03-29 19:10:30,254 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Wl,-z,pack-relative-relocs -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-loongarch64-cpython-314/Bio/Nexus/cnexus.o -L/usr/lib -o build/lib.linux-loongarch64-cpython-314/Bio/Nexus/cnexus.cpython-314-loongarch64-linux-musl.so 2026-03-29 19:10:30,268 root INFO building 'Bio.motifs._pwm' extension 2026-03-29 19:10:30,269 root INFO creating build/temp.linux-loongarch64-cpython-314/Bio/motifs 2026-03-29 19:10:30,269 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.14 -c Bio/motifs/_pwm.c -o build/temp.linux-loongarch64-cpython-314/Bio/motifs/_pwm.o 2026-03-29 19:10:30,498 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Wl,-z,pack-relative-relocs -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-loongarch64-cpython-314/Bio/motifs/_pwm.o -L/usr/lib -o build/lib.linux-loongarch64-cpython-314/Bio/motifs/_pwm.cpython-314-loongarch64-linux-musl.so 2026-03-29 19:10:30,513 root INFO building 'Bio.Cluster._cluster' extension 2026-03-29 19:10:30,514 root INFO creating build/temp.linux-loongarch64-cpython-314/Bio/Cluster 2026-03-29 19:10:30,514 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.14 -c Bio/Cluster/cluster.c -o build/temp.linux-loongarch64-cpython-314/Bio/Cluster/cluster.o -DCLUSTER_USE_PYTHON_MEMORY 2026-03-29 19:10:33,708 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.14 -c Bio/Cluster/clustermodule.c -o build/temp.linux-loongarch64-cpython-314/Bio/Cluster/clustermodule.o -DCLUSTER_USE_PYTHON_MEMORY 2026-03-29 19:10:34,794 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Wl,-z,pack-relative-relocs -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-loongarch64-cpython-314/Bio/Cluster/cluster.o build/temp.linux-loongarch64-cpython-314/Bio/Cluster/clustermodule.o -L/usr/lib -o build/lib.linux-loongarch64-cpython-314/Bio/Cluster/_cluster.cpython-314-loongarch64-linux-musl.so 2026-03-29 19:10:34,814 root INFO building 'Bio.PDB.ccealign' extension 2026-03-29 19:10:34,814 root INFO creating build/temp.linux-loongarch64-cpython-314/Bio/PDB 2026-03-29 19:10:34,815 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.14 -c Bio/PDB/ccealignmodule.c -o build/temp.linux-loongarch64-cpython-314/Bio/PDB/ccealignmodule.o 2026-03-29 19:10:35,323 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Wl,-z,pack-relative-relocs -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-loongarch64-cpython-314/Bio/PDB/ccealignmodule.o -L/usr/lib -o build/lib.linux-loongarch64-cpython-314/Bio/PDB/ccealign.cpython-314-loongarch64-linux-musl.so 2026-03-29 19:10:35,339 root INFO building 'Bio.PDB.kdtrees' extension 2026-03-29 19:10:35,340 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.14 -c Bio/PDB/kdtrees.c -o build/temp.linux-loongarch64-cpython-314/Bio/PDB/kdtrees.o 2026-03-29 19:10:36,003 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Wl,-z,pack-relative-relocs -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-loongarch64-cpython-314/Bio/PDB/kdtrees.o -L/usr/lib -o build/lib.linux-loongarch64-cpython-314/Bio/PDB/kdtrees.cpython-314-loongarch64-linux-musl.so 2026-03-29 19:10:36,019 root INFO building 'Bio.PDB._bcif_helper' extension 2026-03-29 19:10:36,020 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.14 -c Bio/PDB/bcifhelpermodule.c -o build/temp.linux-loongarch64-cpython-314/Bio/PDB/bcifhelpermodule.o 2026-03-29 19:10:36,253 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Wl,-z,pack-relative-relocs -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-loongarch64-cpython-314/Bio/PDB/bcifhelpermodule.o -L/usr/lib -o build/lib.linux-loongarch64-cpython-314/Bio/PDB/_bcif_helper.cpython-314-loongarch64-linux-musl.so 2026-03-29 19:10:36,268 root INFO building 'Bio.SeqIO._twoBitIO' extension 2026-03-29 19:10:36,268 root INFO creating build/temp.linux-loongarch64-cpython-314/Bio/SeqIO 2026-03-29 19:10:36,268 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.14 -c Bio/SeqIO/_twoBitIO.c -o build/temp.linux-loongarch64-cpython-314/Bio/SeqIO/_twoBitIO.o 2026-03-29 19:10:36,565 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Wl,-z,pack-relative-relocs -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-loongarch64-cpython-314/Bio/SeqIO/_twoBitIO.o -L/usr/lib -o build/lib.linux-loongarch64-cpython-314/Bio/SeqIO/_twoBitIO.cpython-314-loongarch64-linux-musl.so 2026-03-29 19:10:36,590 root INFO installing to build/bdist.linux-loongarch64/wheel 2026-03-29 19:10:36,590 root INFO running install 2026-03-29 19:10:36,603 root INFO running install_lib 2026-03-29 19:10:36,608 root INFO creating build/bdist.linux-loongarch64/wheel 2026-03-29 19:10:36,608 root INFO creating build/bdist.linux-loongarch64/wheel/Bio 2026-03-29 19:10:36,609 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/PopGen 2026-03-29 19:10:36,609 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/PopGen/GenePop 2026-03-29 19:10:36,609 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PopGen/GenePop/LargeFileParser.py -> build/bdist.linux-loongarch64/wheel/./Bio/PopGen/GenePop 2026-03-29 19:10:36,610 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PopGen/GenePop/FileParser.py -> build/bdist.linux-loongarch64/wheel/./Bio/PopGen/GenePop 2026-03-29 19:10:36,610 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PopGen/GenePop/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/PopGen/GenePop 2026-03-29 19:10:36,610 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PopGen/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/PopGen 2026-03-29 19:10:36,611 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/NMR 2026-03-29 19:10:36,611 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/NMR/xpktools.py -> build/bdist.linux-loongarch64/wheel/./Bio/NMR 2026-03-29 19:10:36,611 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/NMR/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/NMR 2026-03-29 19:10:36,612 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/NMR/NOEtools.py -> build/bdist.linux-loongarch64/wheel/./Bio/NMR 2026-03-29 19:10:36,612 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/ExPASy 2026-03-29 19:10:36,613 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/ExPASy/ScanProsite.py -> build/bdist.linux-loongarch64/wheel/./Bio/ExPASy 2026-03-29 19:10:36,613 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/ExPASy/Prodoc.py -> build/bdist.linux-loongarch64/wheel/./Bio/ExPASy 2026-03-29 19:10:36,613 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/ExPASy/Prosite.py -> build/bdist.linux-loongarch64/wheel/./Bio/ExPASy 2026-03-29 19:10:36,614 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/ExPASy/Enzyme.py -> build/bdist.linux-loongarch64/wheel/./Bio/ExPASy 2026-03-29 19:10:36,614 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/ExPASy/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/ExPASy 2026-03-29 19:10:36,614 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/ExPASy/cellosaurus.py -> build/bdist.linux-loongarch64/wheel/./Bio/ExPASy 2026-03-29 19:10:36,615 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/pairwise2.py -> build/bdist.linux-loongarch64/wheel/./Bio 2026-03-29 19:10:36,615 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/AlignIO 2026-03-29 19:10:36,615 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/AlignIO/MsfIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/AlignIO 2026-03-29 19:10:36,616 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/AlignIO/EmbossIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/AlignIO 2026-03-29 19:10:36,616 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/AlignIO/StockholmIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/AlignIO 2026-03-29 19:10:36,616 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/AlignIO/ClustalIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/AlignIO 2026-03-29 19:10:36,617 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/AlignIO/MafIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/AlignIO 2026-03-29 19:10:36,617 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/AlignIO/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/AlignIO 2026-03-29 19:10:36,618 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/AlignIO/FastaIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/AlignIO 2026-03-29 19:10:36,618 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/AlignIO/PhylipIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/AlignIO 2026-03-29 19:10:36,618 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/AlignIO/MauveIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/AlignIO 2026-03-29 19:10:36,619 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/AlignIO/NexusIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/AlignIO 2026-03-29 19:10:36,619 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/AlignIO/Interfaces.py -> build/bdist.linux-loongarch64/wheel/./Bio/AlignIO 2026-03-29 19:10:36,619 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SeqRecord.py -> build/bdist.linux-loongarch64/wheel/./Bio 2026-03-29 19:10:36,620 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/_utils.py -> build/bdist.linux-loongarch64/wheel/./Bio 2026-03-29 19:10:36,620 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/cpairwise2module.c -> build/bdist.linux-loongarch64/wheel/./Bio 2026-03-29 19:10:36,621 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/CAPS 2026-03-29 19:10:36,621 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/CAPS/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/CAPS 2026-03-29 19:10:36,621 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/Blast 2026-03-29 19:10:36,621 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Blast/_writers.py -> build/bdist.linux-loongarch64/wheel/./Bio/Blast 2026-03-29 19:10:36,622 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Blast/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/Blast 2026-03-29 19:10:36,622 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Blast/NCBIWWW.py -> build/bdist.linux-loongarch64/wheel/./Bio/Blast 2026-03-29 19:10:36,623 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Blast/NCBIXML.py -> build/bdist.linux-loongarch64/wheel/./Bio/Blast 2026-03-29 19:10:36,623 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Blast/_parser.py -> build/bdist.linux-loongarch64/wheel/./Bio/Blast 2026-03-29 19:10:36,623 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/cpairwise2.cpython-314-loongarch64-linux-musl.so -> build/bdist.linux-loongarch64/wheel/./Bio 2026-03-29 19:10:36,624 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/Emboss 2026-03-29 19:10:36,624 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Emboss/PrimerSearch.py -> build/bdist.linux-loongarch64/wheel/./Bio/Emboss 2026-03-29 19:10:36,625 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Emboss/Primer3.py -> build/bdist.linux-loongarch64/wheel/./Bio/Emboss 2026-03-29 19:10:36,625 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Emboss/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/Emboss 2026-03-29 19:10:36,625 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/TogoWS 2026-03-29 19:10:36,626 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/TogoWS/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/TogoWS 2026-03-29 19:10:36,626 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/PDB 2026-03-29 19:10:36,626 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/Chain.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-03-29 19:10:36,627 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/parse_pdb_header.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-03-29 19:10:36,627 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/Structure.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-03-29 19:10:36,627 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/NACCESS.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-03-29 19:10:36,628 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/MMCIFParser.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-03-29 19:10:36,628 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/internal_coords.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-03-29 19:10:36,629 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/StructureAlignment.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-03-29 19:10:36,629 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/Polypeptide.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-03-29 19:10:36,629 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/StructureBuilder.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-03-29 19:10:36,630 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/Selection.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-03-29 19:10:36,630 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/_bcif_helper.cpython-314-loongarch64-linux-musl.so -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-03-29 19:10:36,631 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/PICIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-03-29 19:10:36,631 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/PDBMLParser.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-03-29 19:10:36,631 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/Dice.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-03-29 19:10:36,632 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/ic_rebuild.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-03-29 19:10:36,632 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/kdtrees.cpython-314-loongarch64-linux-musl.so -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-03-29 19:10:36,633 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/AbstractPropertyMap.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-03-29 19:10:36,633 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/ccealign.cpython-314-loongarch64-linux-musl.so -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-03-29 19:10:36,633 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/cealign.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-03-29 19:10:36,634 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/DSSP.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-03-29 19:10:36,634 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/alphafold_db.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-03-29 19:10:36,634 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/HSExposure.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-03-29 19:10:36,635 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/PDBIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-03-29 19:10:36,635 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/Residue.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-03-29 19:10:36,635 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/ic_data.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-03-29 19:10:36,636 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/PSEA.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-03-29 19:10:36,636 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/FragmentMapper.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-03-29 19:10:36,637 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/vectors.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-03-29 19:10:36,637 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-03-29 19:10:36,637 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/MMCIF2Dict.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-03-29 19:10:36,638 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/mmcifio.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-03-29 19:10:36,638 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/binary_cif.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-03-29 19:10:36,638 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/NeighborSearch.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-03-29 19:10:36,639 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/bcifhelpermodule.c -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-03-29 19:10:36,639 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/Atom.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-03-29 19:10:36,639 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/ResidueDepth.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-03-29 19:10:36,640 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/PDBList.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-03-29 19:10:36,640 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/Model.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-03-29 19:10:36,640 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/Entity.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-03-29 19:10:36,641 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/PDBParser.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-03-29 19:10:36,641 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/kdtrees.c -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-03-29 19:10:36,642 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/Superimposer.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-03-29 19:10:36,642 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/ccealignmodule.c -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-03-29 19:10:36,642 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/qcprot.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-03-29 19:10:36,643 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/SCADIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-03-29 19:10:36,643 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/SASA.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-03-29 19:10:36,643 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/PDB/mmtf 2026-03-29 19:10:36,644 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/mmtf/DefaultParser.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB/mmtf 2026-03-29 19:10:36,644 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/mmtf/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB/mmtf 2026-03-29 19:10:36,644 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/mmtf/mmtfio.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB/mmtf 2026-03-29 19:10:36,645 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/PDB/PDBExceptions.py -> build/bdist.linux-loongarch64/wheel/./Bio/PDB 2026-03-29 19:10:36,645 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/SwissProt 2026-03-29 19:10:36,645 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SwissProt/KeyWList.py -> build/bdist.linux-loongarch64/wheel/./Bio/SwissProt 2026-03-29 19:10:36,646 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SwissProt/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/SwissProt 2026-03-29 19:10:36,646 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/SeqUtils 2026-03-29 19:10:36,646 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SeqUtils/IsoelectricPoint.py -> build/bdist.linux-loongarch64/wheel/./Bio/SeqUtils 2026-03-29 19:10:36,647 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SeqUtils/ProtParam.py -> build/bdist.linux-loongarch64/wheel/./Bio/SeqUtils 2026-03-29 19:10:36,647 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SeqUtils/MeltingTemp.py -> build/bdist.linux-loongarch64/wheel/./Bio/SeqUtils 2026-03-29 19:10:36,648 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SeqUtils/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/SeqUtils 2026-03-29 19:10:36,648 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SeqUtils/CheckSum.py -> build/bdist.linux-loongarch64/wheel/./Bio/SeqUtils 2026-03-29 19:10:36,648 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SeqUtils/lcc.py -> build/bdist.linux-loongarch64/wheel/./Bio/SeqUtils 2026-03-29 19:10:36,649 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SeqUtils/ProtParamData.py -> build/bdist.linux-loongarch64/wheel/./Bio/SeqUtils 2026-03-29 19:10:36,649 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/Geo 2026-03-29 19:10:36,649 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Geo/Record.py -> build/bdist.linux-loongarch64/wheel/./Bio/Geo 2026-03-29 19:10:36,650 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Geo/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/Geo 2026-03-29 19:10:36,650 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/py.typed -> build/bdist.linux-loongarch64/wheel/./Bio 2026-03-29 19:10:36,650 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/UniProt 2026-03-29 19:10:36,651 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/UniProt/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/UniProt 2026-03-29 19:10:36,651 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/UniProt/GOA.py -> build/bdist.linux-loongarch64/wheel/./Bio/UniProt 2026-03-29 19:10:36,651 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/SCOP 2026-03-29 19:10:36,652 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SCOP/Hie.py -> build/bdist.linux-loongarch64/wheel/./Bio/SCOP 2026-03-29 19:10:36,652 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SCOP/Raf.py -> build/bdist.linux-loongarch64/wheel/./Bio/SCOP 2026-03-29 19:10:36,652 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SCOP/Dom.py -> build/bdist.linux-loongarch64/wheel/./Bio/SCOP 2026-03-29 19:10:36,653 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SCOP/Cla.py -> build/bdist.linux-loongarch64/wheel/./Bio/SCOP 2026-03-29 19:10:36,653 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SCOP/Des.py -> build/bdist.linux-loongarch64/wheel/./Bio/SCOP 2026-03-29 19:10:36,653 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SCOP/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/SCOP 2026-03-29 19:10:36,654 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SCOP/Residues.py -> build/bdist.linux-loongarch64/wheel/./Bio/SCOP 2026-03-29 19:10:36,654 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/SearchIO 2026-03-29 19:10:36,654 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/SearchIO/InfernalIO 2026-03-29 19:10:36,655 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/InfernalIO/_base.py -> build/bdist.linux-loongarch64/wheel/./Bio/SearchIO/InfernalIO 2026-03-29 19:10:36,655 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/InfernalIO/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/SearchIO/InfernalIO 2026-03-29 19:10:36,655 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/InfernalIO/infernal_tab.py -> build/bdist.linux-loongarch64/wheel/./Bio/SearchIO/InfernalIO 2026-03-29 19:10:36,656 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/InfernalIO/infernal_text.py -> build/bdist.linux-loongarch64/wheel/./Bio/SearchIO/InfernalIO 2026-03-29 19:10:36,656 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/_utils.py -> build/bdist.linux-loongarch64/wheel/./Bio/SearchIO 2026-03-29 19:10:36,657 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/_index.py -> build/bdist.linux-loongarch64/wheel/./Bio/SearchIO 2026-03-29 19:10:36,657 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/SearchIO/_model 2026-03-29 19:10:36,657 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/_model/query.py -> build/bdist.linux-loongarch64/wheel/./Bio/SearchIO/_model 2026-03-29 19:10:36,658 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/_model/_base.py -> build/bdist.linux-loongarch64/wheel/./Bio/SearchIO/_model 2026-03-29 19:10:36,658 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/_model/hit.py -> build/bdist.linux-loongarch64/wheel/./Bio/SearchIO/_model 2026-03-29 19:10:36,658 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/_model/hsp.py -> build/bdist.linux-loongarch64/wheel/./Bio/SearchIO/_model 2026-03-29 19:10:36,659 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/_model/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/SearchIO/_model 2026-03-29 19:10:36,659 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/SearchIO/BlastIO 2026-03-29 19:10:36,659 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/BlastIO/blast_tab.py -> build/bdist.linux-loongarch64/wheel/./Bio/SearchIO/BlastIO 2026-03-29 19:10:36,660 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/BlastIO/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/SearchIO/BlastIO 2026-03-29 19:10:36,660 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/BlastIO/blast_xml.py -> build/bdist.linux-loongarch64/wheel/./Bio/SearchIO/BlastIO 2026-03-29 19:10:36,661 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/SearchIO/HmmerIO 2026-03-29 19:10:36,661 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/HmmerIO/hmmer3_tab.py -> build/bdist.linux-loongarch64/wheel/./Bio/SearchIO/HmmerIO 2026-03-29 19:10:36,661 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/HmmerIO/hmmer3_text.py -> build/bdist.linux-loongarch64/wheel/./Bio/SearchIO/HmmerIO 2026-03-29 19:10:36,662 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/HmmerIO/_base.py -> build/bdist.linux-loongarch64/wheel/./Bio/SearchIO/HmmerIO 2026-03-29 19:10:36,662 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/HmmerIO/hmmer3_domtab.py -> build/bdist.linux-loongarch64/wheel/./Bio/SearchIO/HmmerIO 2026-03-29 19:10:36,662 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/HmmerIO/hmmer2_text.py -> build/bdist.linux-loongarch64/wheel/./Bio/SearchIO/HmmerIO 2026-03-29 19:10:36,663 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/HmmerIO/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/SearchIO/HmmerIO 2026-03-29 19:10:36,663 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/SearchIO 2026-03-29 19:10:36,664 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/SearchIO/InterproscanIO 2026-03-29 19:10:36,664 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/InterproscanIO/interproscan_xml.py -> build/bdist.linux-loongarch64/wheel/./Bio/SearchIO/InterproscanIO 2026-03-29 19:10:36,664 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/InterproscanIO/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/SearchIO/InterproscanIO 2026-03-29 19:10:36,665 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/SearchIO/ExonerateIO 2026-03-29 19:10:36,665 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/ExonerateIO/exonerate_vulgar.py -> build/bdist.linux-loongarch64/wheel/./Bio/SearchIO/ExonerateIO 2026-03-29 19:10:36,665 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/ExonerateIO/exonerate_cigar.py -> build/bdist.linux-loongarch64/wheel/./Bio/SearchIO/ExonerateIO 2026-03-29 19:10:36,666 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/ExonerateIO/_base.py -> build/bdist.linux-loongarch64/wheel/./Bio/SearchIO/ExonerateIO 2026-03-29 19:10:36,666 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/ExonerateIO/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/SearchIO/ExonerateIO 2026-03-29 19:10:36,666 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/ExonerateIO/exonerate_text.py -> build/bdist.linux-loongarch64/wheel/./Bio/SearchIO/ExonerateIO 2026-03-29 19:10:36,667 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/FastaIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/SearchIO 2026-03-29 19:10:36,667 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/SearchIO/HHsuiteIO 2026-03-29 19:10:36,667 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/HHsuiteIO/hhsuite2_text.py -> build/bdist.linux-loongarch64/wheel/./Bio/SearchIO/HHsuiteIO 2026-03-29 19:10:36,668 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/HHsuiteIO/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/SearchIO/HHsuiteIO 2026-03-29 19:10:36,668 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SearchIO/BlatIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/SearchIO 2026-03-29 19:10:36,668 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/codonalign 2026-03-29 19:10:36,669 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/codonalign/codonseq.py -> build/bdist.linux-loongarch64/wheel/./Bio/codonalign 2026-03-29 19:10:36,669 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/codonalign/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/codonalign 2026-03-29 19:10:36,670 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/codonalign/codonalignment.py -> build/bdist.linux-loongarch64/wheel/./Bio/codonalign 2026-03-29 19:10:36,670 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/Sequencing 2026-03-29 19:10:36,670 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Sequencing/Phd.py -> build/bdist.linux-loongarch64/wheel/./Bio/Sequencing 2026-03-29 19:10:36,671 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Sequencing/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/Sequencing 2026-03-29 19:10:36,671 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Sequencing/Ace.py -> build/bdist.linux-loongarch64/wheel/./Bio/Sequencing 2026-03-29 19:10:36,671 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/Pathway 2026-03-29 19:10:36,672 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Pathway/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/Pathway 2026-03-29 19:10:36,672 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/Pathway/Rep 2026-03-29 19:10:36,672 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Pathway/Rep/MultiGraph.py -> build/bdist.linux-loongarch64/wheel/./Bio/Pathway/Rep 2026-03-29 19:10:36,673 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Pathway/Rep/Graph.py -> build/bdist.linux-loongarch64/wheel/./Bio/Pathway/Rep 2026-03-29 19:10:36,673 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Pathway/Rep/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/Pathway/Rep 2026-03-29 19:10:36,673 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/Compass 2026-03-29 19:10:36,674 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Compass/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/Compass 2026-03-29 19:10:36,674 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/GenBank 2026-03-29 19:10:36,674 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/GenBank/utils.py -> build/bdist.linux-loongarch64/wheel/./Bio/GenBank 2026-03-29 19:10:36,675 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/GenBank/Record.py -> build/bdist.linux-loongarch64/wheel/./Bio/GenBank 2026-03-29 19:10:36,675 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/GenBank/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/GenBank 2026-03-29 19:10:36,675 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/GenBank/Scanner.py -> build/bdist.linux-loongarch64/wheel/./Bio/GenBank 2026-03-29 19:10:36,676 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/motifs 2026-03-29 19:10:36,676 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/motifs/thresholds.py -> build/bdist.linux-loongarch64/wheel/./Bio/motifs 2026-03-29 19:10:36,677 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/motifs/_pwm.cpython-314-loongarch64-linux-musl.so -> build/bdist.linux-loongarch64/wheel/./Bio/motifs 2026-03-29 19:10:36,677 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/motifs/clusterbuster.py -> build/bdist.linux-loongarch64/wheel/./Bio/motifs 2026-03-29 19:10:36,677 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/motifs/matrix.py -> build/bdist.linux-loongarch64/wheel/./Bio/motifs 2026-03-29 19:10:36,678 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/motifs/meme.py -> build/bdist.linux-loongarch64/wheel/./Bio/motifs 2026-03-29 19:10:36,678 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/motifs/mast.py -> build/bdist.linux-loongarch64/wheel/./Bio/motifs 2026-03-29 19:10:36,678 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/motifs/minimal.py -> build/bdist.linux-loongarch64/wheel/./Bio/motifs 2026-03-29 19:10:36,679 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/motifs/pfm.py -> build/bdist.linux-loongarch64/wheel/./Bio/motifs 2026-03-29 19:10:36,679 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/motifs/_pwm.c -> build/bdist.linux-loongarch64/wheel/./Bio/motifs 2026-03-29 19:10:36,679 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/motifs/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/motifs 2026-03-29 19:10:36,680 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/motifs/xms.py -> build/bdist.linux-loongarch64/wheel/./Bio/motifs 2026-03-29 19:10:36,680 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/motifs/alignace.py -> build/bdist.linux-loongarch64/wheel/./Bio/motifs 2026-03-29 19:10:36,681 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/motifs/jaspar 2026-03-29 19:10:36,681 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/motifs/jaspar/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/motifs/jaspar 2026-03-29 19:10:36,681 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/motifs/jaspar/db.py -> build/bdist.linux-loongarch64/wheel/./Bio/motifs/jaspar 2026-03-29 19:10:36,682 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/motifs/transfac.py -> build/bdist.linux-loongarch64/wheel/./Bio/motifs 2026-03-29 19:10:36,682 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/Medline 2026-03-29 19:10:36,682 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Medline/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/Medline 2026-03-29 19:10:36,683 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/SeqIO 2026-03-29 19:10:36,683 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SeqIO/GfaIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/SeqIO 2026-03-29 19:10:36,683 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SeqIO/SeqXmlIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/SeqIO 2026-03-29 19:10:36,684 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SeqIO/AbiIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/SeqIO 2026-03-29 19:10:36,684 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SeqIO/NibIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/SeqIO 2026-03-29 19:10:36,684 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SeqIO/SwissIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/SeqIO 2026-03-29 19:10:36,685 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SeqIO/_twoBitIO.cpython-314-loongarch64-linux-musl.so -> build/bdist.linux-loongarch64/wheel/./Bio/SeqIO 2026-03-29 19:10:36,685 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SeqIO/TabIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/SeqIO 2026-03-29 19:10:36,686 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SeqIO/PirIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/SeqIO 2026-03-29 19:10:36,686 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SeqIO/_twoBitIO.c -> build/bdist.linux-loongarch64/wheel/./Bio/SeqIO 2026-03-29 19:10:36,686 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SeqIO/SffIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/SeqIO 2026-03-29 19:10:36,687 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SeqIO/IgIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/SeqIO 2026-03-29 19:10:36,687 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SeqIO/InsdcIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/SeqIO 2026-03-29 19:10:36,687 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SeqIO/_index.py -> build/bdist.linux-loongarch64/wheel/./Bio/SeqIO 2026-03-29 19:10:36,688 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SeqIO/PdbIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/SeqIO 2026-03-29 19:10:36,688 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SeqIO/UniprotIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/SeqIO 2026-03-29 19:10:36,689 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SeqIO/XdnaIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/SeqIO 2026-03-29 19:10:36,689 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SeqIO/SnapGeneIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/SeqIO 2026-03-29 19:10:36,689 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SeqIO/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/SeqIO 2026-03-29 19:10:36,690 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SeqIO/QualityIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/SeqIO 2026-03-29 19:10:36,690 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SeqIO/GckIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/SeqIO 2026-03-29 19:10:36,691 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SeqIO/PhdIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/SeqIO 2026-03-29 19:10:36,691 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SeqIO/FastaIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/SeqIO 2026-03-29 19:10:36,691 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SeqIO/TwoBitIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/SeqIO 2026-03-29 19:10:36,692 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SeqIO/AceIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/SeqIO 2026-03-29 19:10:36,692 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SeqIO/Interfaces.py -> build/bdist.linux-loongarch64/wheel/./Bio/SeqIO 2026-03-29 19:10:36,692 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SeqFeature.py -> build/bdist.linux-loongarch64/wheel/./Bio 2026-03-29 19:10:36,693 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/UniGene 2026-03-29 19:10:36,693 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/UniGene/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/UniGene 2026-03-29 19:10:36,694 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/Align 2026-03-29 19:10:36,694 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/chain.py -> build/bdist.linux-loongarch64/wheel/./Bio/Align 2026-03-29 19:10:36,694 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/_pairwisealigner.cpython-314-loongarch64-linux-musl.so -> build/bdist.linux-loongarch64/wheel/./Bio/Align 2026-03-29 19:10:36,695 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/AlignInfo.py -> build/bdist.linux-loongarch64/wheel/./Bio/Align 2026-03-29 19:10:36,695 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/nexus.py -> build/bdist.linux-loongarch64/wheel/./Bio/Align 2026-03-29 19:10:36,695 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/_pairwisealigner.h -> build/bdist.linux-loongarch64/wheel/./Bio/Align 2026-03-29 19:10:36,696 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/interfaces.py -> build/bdist.linux-loongarch64/wheel/./Bio/Align 2026-03-29 19:10:36,696 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/_codonaligner.cpython-314-loongarch64-linux-musl.so -> build/bdist.linux-loongarch64/wheel/./Bio/Align 2026-03-29 19:10:36,697 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/_aligncore.cpython-314-loongarch64-linux-musl.so -> build/bdist.linux-loongarch64/wheel/./Bio/Align 2026-03-29 19:10:36,697 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/exonerate.py -> build/bdist.linux-loongarch64/wheel/./Bio/Align 2026-03-29 19:10:36,698 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/Align/substitution_matrices 2026-03-29 19:10:36,698 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/Align/substitution_matrices/data 2026-03-29 19:10:36,698 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data/MDM78 -> build/bdist.linux-loongarch64/wheel/./Bio/Align/substitution_matrices/data 2026-03-29 19:10:36,698 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data/JOHNSON -> build/bdist.linux-loongarch64/wheel/./Bio/Align/substitution_matrices/data 2026-03-29 19:10:36,699 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data/STR -> build/bdist.linux-loongarch64/wheel/./Bio/Align/substitution_matrices/data 2026-03-29 19:10:36,699 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data/BLOSUM80 -> build/bdist.linux-loongarch64/wheel/./Bio/Align/substitution_matrices/data 2026-03-29 19:10:36,700 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data/BENNER22 -> build/bdist.linux-loongarch64/wheel/./Bio/Align/substitution_matrices/data 2026-03-29 19:10:36,700 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data/LEVIN -> build/bdist.linux-loongarch64/wheel/./Bio/Align/substitution_matrices/data 2026-03-29 19:10:36,700 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data/RAO -> build/bdist.linux-loongarch64/wheel/./Bio/Align/substitution_matrices/data 2026-03-29 19:10:36,701 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data/GENETIC -> build/bdist.linux-loongarch64/wheel/./Bio/Align/substitution_matrices/data 2026-03-29 19:10:36,701 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data/FENG -> build/bdist.linux-loongarch64/wheel/./Bio/Align/substitution_matrices/data 2026-03-29 19:10:36,701 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data/JONES -> build/bdist.linux-loongarch64/wheel/./Bio/Align/substitution_matrices/data 2026-03-29 19:10:36,702 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data/BLOSUM45 -> build/bdist.linux-loongarch64/wheel/./Bio/Align/substitution_matrices/data 2026-03-29 19:10:36,702 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data/RISLER -> build/bdist.linux-loongarch64/wheel/./Bio/Align/substitution_matrices/data 2026-03-29 19:10:36,702 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data/NUC.4.4 -> build/bdist.linux-loongarch64/wheel/./Bio/Align/substitution_matrices/data 2026-03-29 19:10:36,703 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data/BLOSUM62 -> build/bdist.linux-loongarch64/wheel/./Bio/Align/substitution_matrices/data 2026-03-29 19:10:36,703 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data/PAM250 -> build/bdist.linux-loongarch64/wheel/./Bio/Align/substitution_matrices/data 2026-03-29 19:10:36,703 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data/GONNET1992 -> build/bdist.linux-loongarch64/wheel/./Bio/Align/substitution_matrices/data 2026-03-29 19:10:36,704 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data/BENNER74 -> build/bdist.linux-loongarch64/wheel/./Bio/Align/substitution_matrices/data 2026-03-29 19:10:36,704 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data/MEGABLAST -> build/bdist.linux-loongarch64/wheel/./Bio/Align/substitution_matrices/data 2026-03-29 19:10:36,704 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data/MCLACHLAN -> build/bdist.linux-loongarch64/wheel/./Bio/Align/substitution_matrices/data 2026-03-29 19:10:36,705 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data/HOXD70 -> build/bdist.linux-loongarch64/wheel/./Bio/Align/substitution_matrices/data 2026-03-29 19:10:36,705 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data/TRANS -> build/bdist.linux-loongarch64/wheel/./Bio/Align/substitution_matrices/data 2026-03-29 19:10:36,705 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data/DAYHOFF -> build/bdist.linux-loongarch64/wheel/./Bio/Align/substitution_matrices/data 2026-03-29 19:10:36,706 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data/BLASTP -> build/bdist.linux-loongarch64/wheel/./Bio/Align/substitution_matrices/data 2026-03-29 19:10:36,706 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data/BLOSUM50 -> build/bdist.linux-loongarch64/wheel/./Bio/Align/substitution_matrices/data 2026-03-29 19:10:36,706 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data/BLOSUM90 -> build/bdist.linux-loongarch64/wheel/./Bio/Align/substitution_matrices/data 2026-03-29 19:10:36,707 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data/SCHNEIDER -> build/bdist.linux-loongarch64/wheel/./Bio/Align/substitution_matrices/data 2026-03-29 19:10:36,707 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data/BENNER6 -> build/bdist.linux-loongarch64/wheel/./Bio/Align/substitution_matrices/data 2026-03-29 19:10:36,707 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data/BLASTN -> build/bdist.linux-loongarch64/wheel/./Bio/Align/substitution_matrices/data 2026-03-29 19:10:36,708 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data/PAM30 -> build/bdist.linux-loongarch64/wheel/./Bio/Align/substitution_matrices/data 2026-03-29 19:10:36,708 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/data/PAM70 -> build/bdist.linux-loongarch64/wheel/./Bio/Align/substitution_matrices/data 2026-03-29 19:10:36,709 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/_arraycore.c -> build/bdist.linux-loongarch64/wheel/./Bio/Align/substitution_matrices 2026-03-29 19:10:36,709 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/_arraycore.h -> build/bdist.linux-loongarch64/wheel/./Bio/Align/substitution_matrices 2026-03-29 19:10:36,709 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/_arraycore.cpython-314-loongarch64-linux-musl.so -> build/bdist.linux-loongarch64/wheel/./Bio/Align/substitution_matrices 2026-03-29 19:10:36,710 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/substitution_matrices/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/Align/substitution_matrices 2026-03-29 19:10:36,710 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/bigmaf.py -> build/bdist.linux-loongarch64/wheel/./Bio/Align 2026-03-29 19:10:36,710 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/sam.py -> build/bdist.linux-loongarch64/wheel/./Bio/Align 2026-03-29 19:10:36,711 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/bed.py -> build/bdist.linux-loongarch64/wheel/./Bio/Align 2026-03-29 19:10:36,711 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/hhr.py -> build/bdist.linux-loongarch64/wheel/./Bio/Align 2026-03-29 19:10:36,711 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/phylip.py -> build/bdist.linux-loongarch64/wheel/./Bio/Align 2026-03-29 19:10:36,712 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/_alignmentcounts.c -> build/bdist.linux-loongarch64/wheel/./Bio/Align 2026-03-29 19:10:36,712 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/msf.py -> build/bdist.linux-loongarch64/wheel/./Bio/Align 2026-03-29 19:10:36,713 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/bigbed.py -> build/bdist.linux-loongarch64/wheel/./Bio/Align 2026-03-29 19:10:36,713 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/mauve.py -> build/bdist.linux-loongarch64/wheel/./Bio/Align 2026-03-29 19:10:36,713 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/_pairwisealigner.c -> build/bdist.linux-loongarch64/wheel/./Bio/Align 2026-03-29 19:10:36,714 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/_aligncore.c -> build/bdist.linux-loongarch64/wheel/./Bio/Align 2026-03-29 19:10:36,714 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/emboss.py -> build/bdist.linux-loongarch64/wheel/./Bio/Align 2026-03-29 19:10:36,715 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/tabular.py -> build/bdist.linux-loongarch64/wheel/./Bio/Align 2026-03-29 19:10:36,715 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/Align 2026-03-29 19:10:36,716 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/_alignmentcounts.cpython-314-loongarch64-linux-musl.so -> build/bdist.linux-loongarch64/wheel/./Bio/Align 2026-03-29 19:10:36,716 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/analysis.py -> build/bdist.linux-loongarch64/wheel/./Bio/Align 2026-03-29 19:10:36,717 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/psl.py -> build/bdist.linux-loongarch64/wheel/./Bio/Align 2026-03-29 19:10:36,717 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/_codonaligner.c -> build/bdist.linux-loongarch64/wheel/./Bio/Align 2026-03-29 19:10:36,717 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/bigpsl.py -> build/bdist.linux-loongarch64/wheel/./Bio/Align 2026-03-29 19:10:36,718 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/clustal.py -> build/bdist.linux-loongarch64/wheel/./Bio/Align 2026-03-29 19:10:36,718 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/a2m.py -> build/bdist.linux-loongarch64/wheel/./Bio/Align 2026-03-29 19:10:36,718 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/stockholm.py -> build/bdist.linux-loongarch64/wheel/./Bio/Align 2026-03-29 19:10:36,719 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/fasta.py -> build/bdist.linux-loongarch64/wheel/./Bio/Align 2026-03-29 19:10:36,719 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Align/maf.py -> build/bdist.linux-loongarch64/wheel/./Bio/Align 2026-03-29 19:10:36,720 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/File.py -> build/bdist.linux-loongarch64/wheel/./Bio 2026-03-29 19:10:36,720 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/Phylo 2026-03-29 19:10:36,720 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Phylo/NewickIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/Phylo 2026-03-29 19:10:36,721 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Phylo/PhyloXML.py -> build/bdist.linux-loongarch64/wheel/./Bio/Phylo 2026-03-29 19:10:36,721 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Phylo/_utils.py -> build/bdist.linux-loongarch64/wheel/./Bio/Phylo 2026-03-29 19:10:36,721 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Phylo/NeXMLIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/Phylo 2026-03-29 19:10:36,722 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Phylo/NeXML.py -> build/bdist.linux-loongarch64/wheel/./Bio/Phylo 2026-03-29 19:10:36,722 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/Phylo/PAML 2026-03-29 19:10:36,722 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Phylo/PAML/chi2.py -> build/bdist.linux-loongarch64/wheel/./Bio/Phylo/PAML 2026-03-29 19:10:36,723 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Phylo/PAML/yn00.py -> build/bdist.linux-loongarch64/wheel/./Bio/Phylo/PAML 2026-03-29 19:10:36,723 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Phylo/PAML/codeml.py -> build/bdist.linux-loongarch64/wheel/./Bio/Phylo/PAML 2026-03-29 19:10:36,723 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Phylo/PAML/baseml.py -> build/bdist.linux-loongarch64/wheel/./Bio/Phylo/PAML 2026-03-29 19:10:36,724 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Phylo/PAML/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/Phylo/PAML 2026-03-29 19:10:36,724 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Phylo/PAML/_paml.py -> build/bdist.linux-loongarch64/wheel/./Bio/Phylo/PAML 2026-03-29 19:10:36,725 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Phylo/PAML/_parse_codeml.py -> build/bdist.linux-loongarch64/wheel/./Bio/Phylo/PAML 2026-03-29 19:10:36,725 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Phylo/PAML/_parse_baseml.py -> build/bdist.linux-loongarch64/wheel/./Bio/Phylo/PAML 2026-03-29 19:10:36,725 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Phylo/PAML/_parse_yn00.py -> build/bdist.linux-loongarch64/wheel/./Bio/Phylo/PAML 2026-03-29 19:10:36,726 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Phylo/Newick.py -> build/bdist.linux-loongarch64/wheel/./Bio/Phylo 2026-03-29 19:10:36,726 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Phylo/BaseTree.py -> build/bdist.linux-loongarch64/wheel/./Bio/Phylo 2026-03-29 19:10:36,726 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Phylo/TreeConstruction.py -> build/bdist.linux-loongarch64/wheel/./Bio/Phylo 2026-03-29 19:10:36,727 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Phylo/PhyloXMLIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/Phylo 2026-03-29 19:10:36,727 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Phylo/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/Phylo 2026-03-29 19:10:36,727 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Phylo/Consensus.py -> build/bdist.linux-loongarch64/wheel/./Bio/Phylo 2026-03-29 19:10:36,728 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Phylo/CDAOIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/Phylo 2026-03-29 19:10:36,728 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Phylo/_cdao_owl.py -> build/bdist.linux-loongarch64/wheel/./Bio/Phylo 2026-03-29 19:10:36,729 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Phylo/CDAO.py -> build/bdist.linux-loongarch64/wheel/./Bio/Phylo 2026-03-29 19:10:36,729 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Phylo/_io.py -> build/bdist.linux-loongarch64/wheel/./Bio/Phylo 2026-03-29 19:10:36,729 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Phylo/NexusIO.py -> build/bdist.linux-loongarch64/wheel/./Bio/Phylo 2026-03-29 19:10:36,730 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/phenotype 2026-03-29 19:10:36,730 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/phenotype/phen_micro.py -> build/bdist.linux-loongarch64/wheel/./Bio/phenotype 2026-03-29 19:10:36,730 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/phenotype/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/phenotype 2026-03-29 19:10:36,731 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/phenotype/pm_fitting.py -> build/bdist.linux-loongarch64/wheel/./Bio/phenotype 2026-03-29 19:10:36,731 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/Alphabet 2026-03-29 19:10:36,731 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Alphabet/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/Alphabet 2026-03-29 19:10:36,732 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio 2026-03-29 19:10:36,732 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/Restriction 2026-03-29 19:10:36,732 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Restriction/PrintFormat.py -> build/bdist.linux-loongarch64/wheel/./Bio/Restriction 2026-03-29 19:10:36,733 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Restriction/Restriction.py -> build/bdist.linux-loongarch64/wheel/./Bio/Restriction 2026-03-29 19:10:36,733 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Restriction/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/Restriction 2026-03-29 19:10:36,734 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Restriction/Restriction_Dictionary.py -> build/bdist.linux-loongarch64/wheel/./Bio/Restriction 2026-03-29 19:10:36,735 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/Entrez 2026-03-29 19:10:36,735 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/Entrez/DTDs 2026-03-29 19:10:36,736 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/isoamsa.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,736 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/phrase.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,736 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Entity.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,737 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/JATS-link1-3.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,737 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/isonum.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,737 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/esummary_gene.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,738 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/JATS-common-atts1-3.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,738 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/ePost_020511.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,739 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_GBSeq.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,739 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/chars.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,739 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Seqloc.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,740 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/isogrk3.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,740 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/notat.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,740 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/references.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,741 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/EMBL_General.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,741 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/JATS-XHTMLtablesetup1-3.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,741 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/isoamsr.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,742 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/journalmeta.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,742 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/elink_020122.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,742 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Seqres.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,743 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/JATS-mathml3-modules1-3.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,743 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Rsite.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,744 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/EMBL_General.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,744 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Sequence.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,744 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/isogrk2.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,745 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Variation.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,745 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_ID1Access.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,745 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/pubmed_080101.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,746 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Seq_split.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,746 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Organism.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,746 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Seqset.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,747 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/default-mixes.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,747 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Entrez2.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,747 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/nlmcatalogrecordset_170601.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,748 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Cdd.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,748 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/xhtml-inlstyle-1.mod -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,748 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Seqalign.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,749 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/MMDB.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,749 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Organism.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,749 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/JATS-para1-3.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,750 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/PIR_General.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,750 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_ObjPrt.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,751 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/isobox.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,751 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/mathmlsetup.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,751 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/JATS-math1-3.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,752 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Pub.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,752 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Seqalign.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,752 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/pubmed_180601.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,753 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_ID2Access.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,753 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/nlmmedlinecitationset_130501.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,753 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/bookdoc_150101.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,754 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_General.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,754 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/htmltable.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,754 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/mathml-in-pubmed.mod -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,755 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Cdd.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,755 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/JATS-chars1-3.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,755 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/PRF_General.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,756 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Cn3d.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,756 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/link.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,757 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_BioTree.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,757 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/SP_General.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,757 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_BioTree.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,758 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/JATS-articlemeta1-3.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,758 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/esummary-v1.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,758 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/isogrk4.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,759 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/eLink_101123.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,759 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_RNA.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,759 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/PDB_General.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,760 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/mmlalias.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,760 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/bookdoc_140101.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,761 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Medlars.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,761 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/PDB_General.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,761 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/isocyr1.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,762 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/MMDB_Structural_model.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,762 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/nlmmedlinecitation_090101.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,762 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/Docsum_3_2.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,763 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/nlmmedlinecitation_080101.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,763 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_General.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,763 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/JATS-related-object1-3.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,764 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/isodia.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,764 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/JATS-section1-3.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,764 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/pmc-1.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,765 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_SeqTable.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,765 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/modules.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,766 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Seqfeat.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,766 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/JATS-list1-3.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,766 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Project.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,767 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Protein.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,767 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/JATS-default-classes1-3.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,767 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/esearch.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,768 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/pubmed_110101.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,768 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/HomoloGene.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,768 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/JATS-notat1-3.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,769 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/backmatter.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,769 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_BioSource.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,770 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/bookdoc_130101.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,770 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Mim.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,770 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Blast4.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,771 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/isomfrk.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,771 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_FeatDef.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,771 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/JATS-archivecustom-modules1-3.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,772 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/archivecustom-mixes.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,772 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Entrezgene.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,772 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/para.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,773 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/eInfo_020511.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,773 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/JATS-nlmcitation1-3.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,773 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Gene.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,774 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_BioSource.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,774 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Submit.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,774 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/Docsum_3_4.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,775 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_MedArchive.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,775 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/JATS-journalmeta1-3.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,776 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/archivecustom-models.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,776 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Medline.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,776 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/JATS-modules1-3.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,777 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/section.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,777 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/eLink_090910.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,778 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/nlmmedlinecitationset_110101.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,778 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/math.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,778 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Remap.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,779 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/MMDB_Chemical_graph.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,779 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Mime.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,779 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/xhtml-table-1.mod -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,780 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/GenBank_General.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,780 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/eSearch_020511.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,780 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_SeqCode.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,781 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/pubmed_140101.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,781 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/nlmmedlinecitationset_150101.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,781 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/Docsum_3_2.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,782 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/MMDB_Structural_model.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,782 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Mime.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,782 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Seqfeat.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,783 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Entrez2.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,783 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/archivearticle.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,784 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_PCSubstance.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,784 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/nlmmedline_011101.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,784 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/INSD_INSDSeq.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,785 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/nlmserials_100101.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,785 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/pubmed_100301.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,785 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/pubmed_020114.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,786 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/common.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,786 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_TxInit.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,787 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_TSeq.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,787 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/archivecustom-classes.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,787 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/Docsum_3_1.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,788 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/mathml3.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,788 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/JATS-mathml3-mathmlsetup1-3.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,788 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/PIR_General.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,789 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/display.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,789 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/Docsum_3_3.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,790 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/PRF_General.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,790 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/SP_General.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,790 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/nlmmedlinecitationset_140101.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,791 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_BlastOutput.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,791 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/nlmmedlinecitationset_100101.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,791 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Pub.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,792 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_TSeq.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,792 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_ID1Access.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,792 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/BITS-question-answer2.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,793 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Rsite.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,793 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/articlemeta.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,794 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/HomoloGene.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,794 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_BlastDL.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,794 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/isogrk1.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,795 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Sequence.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,795 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Mim.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,795 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/bookdoc_110101.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,796 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Submit.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,796 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_PCAssay.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,796 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/isoamsb.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,797 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/default-classes.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,797 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/eSpell.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,797 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/egquery.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,798 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/isomscr.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,798 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Project.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,799 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Medlars.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,799 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/esummary_clinvar.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,799 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/isoamso.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,800 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/isoamsc.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,800 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/isoamsn.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,800 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/pubmed_180101.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,801 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/Docsum_3_4.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,801 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/JATS-common1-3.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,802 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/nlmsharedcatcit_080101.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,802 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/taxon.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,802 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Access.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,803 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/nlmmedlinecitation_011101.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,803 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/JATS-backmatter1-3.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,803 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Access.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,804 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/pubmed_120101.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,804 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/JATS-archivecustom-models1-3.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,804 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Gene.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,805 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/isolat1.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,805 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_BlastOutput.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,806 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_ID2Access.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,806 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/isotech.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,806 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/Docsum_3_1.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,807 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/MMDB_Chemical_graph.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,807 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/mathml3-qname1.mod -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,807 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Seqset.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,808 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/list.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,808 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Seqres.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,808 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/JATS-display1-3.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,809 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/epost.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,809 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/Docsum_3_0.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,810 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/JATS-funding1-3.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,810 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/nlmmedlinecitationset_100301.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,810 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Cn3d.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,811 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/archivecustom-modules.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,811 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/nlm-articleset-2.0.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,811 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/isolat2.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,812 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_GBSeq.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,812 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/eSummary_041029.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,813 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Blast4.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,813 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/JATS-ali-namespace1-3.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,813 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/pubmed_190101.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,814 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_ScoreMat.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,814 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/BITS-embedded-index2.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,814 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/mmlextra.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,815 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/nlmsharedcatcit_090101.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,815 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/pubmed_090101.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,815 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/mathml2-qname-1.mod -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,816 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_FeatDef.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,816 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/Docsum_3_0.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,816 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/GenBank_General.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,817 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/isocyr2.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,817 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/JATS-archivecustom-classes1-3.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,818 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/MMDB.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,818 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/INSD_INSDSeq.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,818 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Seqloc.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,819 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/nlmmedlinecitationset_120101.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,819 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/MMDB_Features.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,819 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/JATS-phrase1-3.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,820 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/nlmmedlinecitationset_130101.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,820 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_all.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,820 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/mathml2.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,821 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_SeqTable.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,821 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/MMDB_Features.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,822 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/JATS-archivecustom-mixes1-3.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,822 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NSE.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,822 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/pubmed_150101.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,823 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_PCSubstance.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,823 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_ObjPrt.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,823 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_TxInit.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,824 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/nlmmedline_080101.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,824 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Biblio.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,824 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/JATS-default-mixes1-3.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,825 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/Docsum_3_3.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,825 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/nlmcommon_090101.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,826 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/pubmed_130501.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,826 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/einfo.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,826 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/format.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,827 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_RNA.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,827 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_PCAssay.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,827 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/bookdoc_100301.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,828 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/JATS-archivearticle1-3-mathml3.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,828 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_MedArchive.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,829 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/isomopf.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,829 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/isopub.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,829 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/XHTMLtablesetup.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,830 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/xmlspecchars.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,830 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/nlmcommon_080101.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,830 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Biblio.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,831 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/pubmed_130101.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,831 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/nlmmedline_090101.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,831 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_PubMed.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,832 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/nlmcommon_011101.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,832 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/pubmed_100101.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,832 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/nlmserials_080101.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,833 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Protein.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,833 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Variation.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,833 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_PubMed.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,834 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/JATS-references1-3.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,834 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/OMSSA.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,835 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_SeqCode.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,835 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Systems.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,835 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_ScoreMat.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,836 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/JATS-format1-3.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,836 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Entrezgene.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,836 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NSE.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,837 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Remap.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,837 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Medline.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,837 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_BlastDL.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,838 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/JATS-xmlspecchars1-3.ent -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,838 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/elink.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,839 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/bookdoc_120101.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,839 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/NCBI_Seq_split.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,839 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/DTDs/OMSSA.mod.dtd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/DTDs 2026-03-29 19:10:36,840 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez 2026-03-29 19:10:36,840 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/Parser.py -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez 2026-03-29 19:10:36,841 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/Entrez/XSDs 2026-03-29 19:10:36,841 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/XSDs/NCBI_BlastOutput2.mod.xsd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/XSDs 2026-03-29 19:10:36,841 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/XSDs/NCBI_BlastOutput2.xsd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/XSDs 2026-03-29 19:10:36,842 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Entrez/XSDs/IPGReportSet.xsd -> build/bdist.linux-loongarch64/wheel/./Bio/Entrez/XSDs 2026-03-29 19:10:36,842 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/SVDSuperimposer 2026-03-29 19:10:36,842 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/SVDSuperimposer/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/SVDSuperimposer 2026-03-29 19:10:36,843 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/Cluster 2026-03-29 19:10:36,843 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Cluster/cluster.c -> build/bdist.linux-loongarch64/wheel/./Bio/Cluster 2026-03-29 19:10:36,843 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Cluster/clustermodule.c -> build/bdist.linux-loongarch64/wheel/./Bio/Cluster 2026-03-29 19:10:36,844 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Cluster/_cluster.cpython-314-loongarch64-linux-musl.so -> build/bdist.linux-loongarch64/wheel/./Bio/Cluster 2026-03-29 19:10:36,844 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Cluster/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/Cluster 2026-03-29 19:10:36,845 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Cluster/cluster.h -> build/bdist.linux-loongarch64/wheel/./Bio/Cluster 2026-03-29 19:10:36,845 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/Nexus 2026-03-29 19:10:36,845 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Nexus/cnexus.c -> build/bdist.linux-loongarch64/wheel/./Bio/Nexus 2026-03-29 19:10:36,846 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Nexus/Trees.py -> build/bdist.linux-loongarch64/wheel/./Bio/Nexus 2026-03-29 19:10:36,846 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Nexus/Nodes.py -> build/bdist.linux-loongarch64/wheel/./Bio/Nexus 2026-03-29 19:10:36,847 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Nexus/StandardData.py -> build/bdist.linux-loongarch64/wheel/./Bio/Nexus 2026-03-29 19:10:36,847 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Nexus/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/Nexus 2026-03-29 19:10:36,847 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Nexus/Nexus.py -> build/bdist.linux-loongarch64/wheel/./Bio/Nexus 2026-03-29 19:10:36,848 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Nexus/cnexus.cpython-314-loongarch64-linux-musl.so -> build/bdist.linux-loongarch64/wheel/./Bio/Nexus 2026-03-29 19:10:36,848 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Seq.py -> build/bdist.linux-loongarch64/wheel/./Bio 2026-03-29 19:10:36,849 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/Data 2026-03-29 19:10:36,849 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Data/IUPACData.py -> build/bdist.linux-loongarch64/wheel/./Bio/Data 2026-03-29 19:10:36,849 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Data/PDBData.py -> build/bdist.linux-loongarch64/wheel/./Bio/Data 2026-03-29 19:10:36,850 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Data/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/Data 2026-03-29 19:10:36,850 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Data/CodonTable.py -> build/bdist.linux-loongarch64/wheel/./Bio/Data 2026-03-29 19:10:36,850 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/bgzf.py -> build/bdist.linux-loongarch64/wheel/./Bio 2026-03-29 19:10:36,851 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/KEGG 2026-03-29 19:10:36,851 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/KEGG/Compound 2026-03-29 19:10:36,852 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/KEGG/Compound/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/KEGG/Compound 2026-03-29 19:10:36,852 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/KEGG/Gene 2026-03-29 19:10:36,852 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/KEGG/Gene/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/KEGG/Gene 2026-03-29 19:10:36,853 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/KEGG/Map 2026-03-29 19:10:36,853 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/KEGG/Map/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/KEGG/Map 2026-03-29 19:10:36,853 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/KEGG/Enzyme 2026-03-29 19:10:36,854 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/KEGG/Enzyme/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/KEGG/Enzyme 2026-03-29 19:10:36,854 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/KEGG/REST.py -> build/bdist.linux-loongarch64/wheel/./Bio/KEGG 2026-03-29 19:10:36,854 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/KEGG/KGML 2026-03-29 19:10:36,855 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/KEGG/KGML/KGML_pathway.py -> build/bdist.linux-loongarch64/wheel/./Bio/KEGG/KGML 2026-03-29 19:10:36,855 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/KEGG/KGML/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/KEGG/KGML 2026-03-29 19:10:36,855 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/KEGG/KGML/KGML_parser.py -> build/bdist.linux-loongarch64/wheel/./Bio/KEGG/KGML 2026-03-29 19:10:36,856 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/KEGG/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/KEGG 2026-03-29 19:10:36,856 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/Graphics 2026-03-29 19:10:36,856 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Graphics/Comparative.py -> build/bdist.linux-loongarch64/wheel/./Bio/Graphics 2026-03-29 19:10:36,857 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/Graphics/GenomeDiagram 2026-03-29 19:10:36,857 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Graphics/GenomeDiagram/_LinearDrawer.py -> build/bdist.linux-loongarch64/wheel/./Bio/Graphics/GenomeDiagram 2026-03-29 19:10:36,857 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Graphics/GenomeDiagram/_Colors.py -> build/bdist.linux-loongarch64/wheel/./Bio/Graphics/GenomeDiagram 2026-03-29 19:10:36,858 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Graphics/GenomeDiagram/_AbstractDrawer.py -> build/bdist.linux-loongarch64/wheel/./Bio/Graphics/GenomeDiagram 2026-03-29 19:10:36,858 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Graphics/GenomeDiagram/_CrossLink.py -> build/bdist.linux-loongarch64/wheel/./Bio/Graphics/GenomeDiagram 2026-03-29 19:10:36,858 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Graphics/GenomeDiagram/_CircularDrawer.py -> build/bdist.linux-loongarch64/wheel/./Bio/Graphics/GenomeDiagram 2026-03-29 19:10:36,859 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Graphics/GenomeDiagram/_GraphSet.py -> build/bdist.linux-loongarch64/wheel/./Bio/Graphics/GenomeDiagram 2026-03-29 19:10:36,859 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Graphics/GenomeDiagram/_Graph.py -> build/bdist.linux-loongarch64/wheel/./Bio/Graphics/GenomeDiagram 2026-03-29 19:10:36,860 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Graphics/GenomeDiagram/_Track.py -> build/bdist.linux-loongarch64/wheel/./Bio/Graphics/GenomeDiagram 2026-03-29 19:10:36,860 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Graphics/GenomeDiagram/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/Graphics/GenomeDiagram 2026-03-29 19:10:36,860 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Graphics/GenomeDiagram/_Diagram.py -> build/bdist.linux-loongarch64/wheel/./Bio/Graphics/GenomeDiagram 2026-03-29 19:10:36,861 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Graphics/GenomeDiagram/_Feature.py -> build/bdist.linux-loongarch64/wheel/./Bio/Graphics/GenomeDiagram 2026-03-29 19:10:36,861 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Graphics/GenomeDiagram/_FeatureSet.py -> build/bdist.linux-loongarch64/wheel/./Bio/Graphics/GenomeDiagram 2026-03-29 19:10:36,861 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Graphics/KGML_vis.py -> build/bdist.linux-loongarch64/wheel/./Bio/Graphics 2026-03-29 19:10:36,862 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Graphics/BasicChromosome.py -> build/bdist.linux-loongarch64/wheel/./Bio/Graphics 2026-03-29 19:10:36,862 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Graphics/DisplayRepresentation.py -> build/bdist.linux-loongarch64/wheel/./Bio/Graphics 2026-03-29 19:10:36,862 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Graphics/ColorSpiral.py -> build/bdist.linux-loongarch64/wheel/./Bio/Graphics 2026-03-29 19:10:36,863 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Graphics/Distribution.py -> build/bdist.linux-loongarch64/wheel/./Bio/Graphics 2026-03-29 19:10:36,863 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Graphics/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/Graphics 2026-03-29 19:10:36,864 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/Affy 2026-03-29 19:10:36,864 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Affy/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/Affy 2026-03-29 19:10:36,864 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/Affy/CelFile.py -> build/bdist.linux-loongarch64/wheel/./Bio/Affy 2026-03-29 19:10:36,865 root INFO creating build/bdist.linux-loongarch64/wheel/Bio/HMM 2026-03-29 19:10:36,865 root INFO copying build/lib.linux-loongarch64-cpython-314/Bio/HMM/__init__.py -> build/bdist.linux-loongarch64/wheel/./Bio/HMM 2026-03-29 19:10:36,865 root INFO creating build/bdist.linux-loongarch64/wheel/BioSQL 2026-03-29 19:10:36,866 root INFO copying build/lib.linux-loongarch64-cpython-314/BioSQL/py.typed -> build/bdist.linux-loongarch64/wheel/./BioSQL 2026-03-29 19:10:36,866 root INFO copying build/lib.linux-loongarch64-cpython-314/BioSQL/Loader.py -> build/bdist.linux-loongarch64/wheel/./BioSQL 2026-03-29 19:10:36,866 root INFO copying build/lib.linux-loongarch64-cpython-314/BioSQL/BioSeqDatabase.py -> build/bdist.linux-loongarch64/wheel/./BioSQL 2026-03-29 19:10:36,867 root INFO copying build/lib.linux-loongarch64-cpython-314/BioSQL/__init__.py -> build/bdist.linux-loongarch64/wheel/./BioSQL 2026-03-29 19:10:36,867 root INFO copying build/lib.linux-loongarch64-cpython-314/BioSQL/BioSeq.py -> build/bdist.linux-loongarch64/wheel/./BioSQL 2026-03-29 19:10:36,867 root INFO copying build/lib.linux-loongarch64-cpython-314/BioSQL/DBUtils.py -> build/bdist.linux-loongarch64/wheel/./BioSQL 2026-03-29 19:10:36,868 root INFO running install_egg_info 2026-03-29 19:10:36,873 root INFO Copying biopython.egg-info to build/bdist.linux-loongarch64/wheel/./biopython-1.86-py3.14.egg-info 2026-03-29 19:10:36,875 root INFO running install_scripts 2026-03-29 19:10:36,886 root INFO creating build/bdist.linux-loongarch64/wheel/biopython-1.86.dist-info/WHEEL 2026-03-29 19:10:36,887 wheel INFO creating '/home/buildozer/aports/community/py3-biopython/src/biopython-1.86/.dist/.tmp-jbo7s7a1/biopython-1.86-cp314-cp314-linux_loongarch64.whl' and adding 'build/bdist.linux-loongarch64/wheel' to it 2026-03-29 19:10:36,887 wheel INFO adding 'Bio/File.py' 2026-03-29 19:10:36,888 wheel INFO adding 'Bio/Seq.py' 2026-03-29 19:10:36,890 wheel INFO adding 'Bio/SeqFeature.py' 2026-03-29 19:10:36,891 wheel INFO adding 'Bio/SeqRecord.py' 2026-03-29 19:10:36,891 wheel INFO adding 'Bio/__init__.py' 2026-03-29 19:10:36,892 wheel INFO adding 'Bio/_utils.py' 2026-03-29 19:10:36,892 wheel INFO adding 'Bio/bgzf.py' 2026-03-29 19:10:36,893 wheel INFO adding 'Bio/cpairwise2.cpython-314-loongarch64-linux-musl.so' 2026-03-29 19:10:36,894 wheel INFO adding 'Bio/cpairwise2module.c' 2026-03-29 19:10:36,894 wheel INFO adding 'Bio/pairwise2.py' 2026-03-29 19:10:36,895 wheel INFO adding 'Bio/py.typed' 2026-03-29 19:10:36,895 wheel INFO adding 'Bio/Affy/CelFile.py' 2026-03-29 19:10:36,896 wheel INFO adding 'Bio/Affy/__init__.py' 2026-03-29 19:10:36,896 wheel INFO adding 'Bio/Align/AlignInfo.py' 2026-03-29 19:10:36,897 wheel INFO adding 'Bio/Align/__init__.py' 2026-03-29 19:10:36,899 wheel INFO adding 'Bio/Align/_aligncore.c' 2026-03-29 19:10:36,899 wheel INFO adding 'Bio/Align/_aligncore.cpython-314-loongarch64-linux-musl.so' 2026-03-29 19:10:36,900 wheel INFO adding 'Bio/Align/_alignmentcounts.c' 2026-03-29 19:10:36,901 wheel INFO adding 'Bio/Align/_alignmentcounts.cpython-314-loongarch64-linux-musl.so' 2026-03-29 19:10:36,902 wheel INFO adding 'Bio/Align/_codonaligner.c' 2026-03-29 19:10:36,903 wheel INFO adding 'Bio/Align/_codonaligner.cpython-314-loongarch64-linux-musl.so' 2026-03-29 19:10:36,904 wheel INFO adding 'Bio/Align/_pairwisealigner.c' 2026-03-29 19:10:36,907 wheel INFO adding 'Bio/Align/_pairwisealigner.cpython-314-loongarch64-linux-musl.so' 2026-03-29 19:10:36,908 wheel INFO adding 'Bio/Align/_pairwisealigner.h' 2026-03-29 19:10:36,909 wheel INFO adding 'Bio/Align/a2m.py' 2026-03-29 19:10:36,909 wheel INFO adding 'Bio/Align/analysis.py' 2026-03-29 19:10:36,910 wheel INFO adding 'Bio/Align/bed.py' 2026-03-29 19:10:36,910 wheel INFO adding 'Bio/Align/bigbed.py' 2026-03-29 19:10:36,911 wheel INFO adding 'Bio/Align/bigmaf.py' 2026-03-29 19:10:36,912 wheel INFO adding 'Bio/Align/bigpsl.py' 2026-03-29 19:10:36,912 wheel INFO adding 'Bio/Align/chain.py' 2026-03-29 19:10:36,913 wheel INFO adding 'Bio/Align/clustal.py' 2026-03-29 19:10:36,913 wheel INFO adding 'Bio/Align/emboss.py' 2026-03-29 19:10:36,913 wheel INFO adding 'Bio/Align/exonerate.py' 2026-03-29 19:10:36,914 wheel INFO adding 'Bio/Align/fasta.py' 2026-03-29 19:10:36,914 wheel INFO adding 'Bio/Align/hhr.py' 2026-03-29 19:10:36,915 wheel INFO adding 'Bio/Align/interfaces.py' 2026-03-29 19:10:36,915 wheel INFO adding 'Bio/Align/maf.py' 2026-03-29 19:10:36,916 wheel INFO adding 'Bio/Align/mauve.py' 2026-03-29 19:10:36,916 wheel INFO adding 'Bio/Align/msf.py' 2026-03-29 19:10:36,916 wheel INFO adding 'Bio/Align/nexus.py' 2026-03-29 19:10:36,917 wheel INFO adding 'Bio/Align/phylip.py' 2026-03-29 19:10:36,917 wheel INFO adding 'Bio/Align/psl.py' 2026-03-29 19:10:36,918 wheel INFO adding 'Bio/Align/sam.py' 2026-03-29 19:10:36,918 wheel INFO adding 'Bio/Align/stockholm.py' 2026-03-29 19:10:36,919 wheel INFO adding 'Bio/Align/tabular.py' 2026-03-29 19:10:36,919 wheel INFO adding 'Bio/Align/substitution_matrices/__init__.py' 2026-03-29 19:10:36,920 wheel INFO adding 'Bio/Align/substitution_matrices/_arraycore.c' 2026-03-29 19:10:36,920 wheel INFO adding 'Bio/Align/substitution_matrices/_arraycore.cpython-314-loongarch64-linux-musl.so' 2026-03-29 19:10:36,921 wheel INFO adding 'Bio/Align/substitution_matrices/_arraycore.h' 2026-03-29 19:10:36,921 wheel INFO adding 'Bio/Align/substitution_matrices/data/BENNER22' 2026-03-29 19:10:36,922 wheel INFO adding 'Bio/Align/substitution_matrices/data/BENNER6' 2026-03-29 19:10:36,922 wheel INFO adding 'Bio/Align/substitution_matrices/data/BENNER74' 2026-03-29 19:10:36,922 wheel INFO adding 'Bio/Align/substitution_matrices/data/BLASTN' 2026-03-29 19:10:36,923 wheel INFO adding 'Bio/Align/substitution_matrices/data/BLASTP' 2026-03-29 19:10:36,923 wheel INFO adding 'Bio/Align/substitution_matrices/data/BLOSUM45' 2026-03-29 19:10:36,923 wheel INFO adding 'Bio/Align/substitution_matrices/data/BLOSUM50' 2026-03-29 19:10:36,924 wheel INFO adding 'Bio/Align/substitution_matrices/data/BLOSUM62' 2026-03-29 19:10:36,924 wheel INFO adding 'Bio/Align/substitution_matrices/data/BLOSUM80' 2026-03-29 19:10:36,924 wheel INFO adding 'Bio/Align/substitution_matrices/data/BLOSUM90' 2026-03-29 19:10:36,925 wheel INFO adding 'Bio/Align/substitution_matrices/data/DAYHOFF' 2026-03-29 19:10:36,925 wheel INFO adding 'Bio/Align/substitution_matrices/data/FENG' 2026-03-29 19:10:36,925 wheel INFO adding 'Bio/Align/substitution_matrices/data/GENETIC' 2026-03-29 19:10:36,926 wheel INFO adding 'Bio/Align/substitution_matrices/data/GONNET1992' 2026-03-29 19:10:36,926 wheel INFO adding 'Bio/Align/substitution_matrices/data/HOXD70' 2026-03-29 19:10:36,926 wheel INFO adding 'Bio/Align/substitution_matrices/data/JOHNSON' 2026-03-29 19:10:36,927 wheel INFO adding 'Bio/Align/substitution_matrices/data/JONES' 2026-03-29 19:10:36,927 wheel INFO adding 'Bio/Align/substitution_matrices/data/LEVIN' 2026-03-29 19:10:36,927 wheel INFO adding 'Bio/Align/substitution_matrices/data/MCLACHLAN' 2026-03-29 19:10:36,928 wheel INFO adding 'Bio/Align/substitution_matrices/data/MDM78' 2026-03-29 19:10:36,928 wheel INFO adding 'Bio/Align/substitution_matrices/data/MEGABLAST' 2026-03-29 19:10:36,928 wheel INFO adding 'Bio/Align/substitution_matrices/data/NUC.4.4' 2026-03-29 19:10:36,929 wheel INFO adding 'Bio/Align/substitution_matrices/data/PAM250' 2026-03-29 19:10:36,929 wheel INFO adding 'Bio/Align/substitution_matrices/data/PAM30' 2026-03-29 19:10:36,929 wheel INFO adding 'Bio/Align/substitution_matrices/data/PAM70' 2026-03-29 19:10:36,929 wheel INFO adding 'Bio/Align/substitution_matrices/data/RAO' 2026-03-29 19:10:36,930 wheel INFO adding 'Bio/Align/substitution_matrices/data/RISLER' 2026-03-29 19:10:36,930 wheel INFO adding 'Bio/Align/substitution_matrices/data/SCHNEIDER' 2026-03-29 19:10:36,931 wheel INFO adding 'Bio/Align/substitution_matrices/data/STR' 2026-03-29 19:10:36,931 wheel INFO adding 'Bio/Align/substitution_matrices/data/TRANS' 2026-03-29 19:10:36,931 wheel INFO adding 'Bio/AlignIO/ClustalIO.py' 2026-03-29 19:10:36,932 wheel INFO adding 'Bio/AlignIO/EmbossIO.py' 2026-03-29 19:10:36,932 wheel INFO adding 'Bio/AlignIO/FastaIO.py' 2026-03-29 19:10:36,933 wheel INFO adding 'Bio/AlignIO/Interfaces.py' 2026-03-29 19:10:36,933 wheel INFO adding 'Bio/AlignIO/MafIO.py' 2026-03-29 19:10:36,933 wheel INFO adding 'Bio/AlignIO/MauveIO.py' 2026-03-29 19:10:36,934 wheel INFO adding 'Bio/AlignIO/MsfIO.py' 2026-03-29 19:10:36,934 wheel INFO adding 'Bio/AlignIO/NexusIO.py' 2026-03-29 19:10:36,935 wheel INFO adding 'Bio/AlignIO/PhylipIO.py' 2026-03-29 19:10:36,935 wheel INFO adding 'Bio/AlignIO/StockholmIO.py' 2026-03-29 19:10:36,936 wheel INFO adding 'Bio/AlignIO/__init__.py' 2026-03-29 19:10:36,936 wheel INFO adding 'Bio/Alphabet/__init__.py' 2026-03-29 19:10:36,937 wheel INFO adding 'Bio/Blast/NCBIWWW.py' 2026-03-29 19:10:36,937 wheel INFO adding 'Bio/Blast/NCBIXML.py' 2026-03-29 19:10:36,938 wheel INFO adding 'Bio/Blast/__init__.py' 2026-03-29 19:10:36,939 wheel INFO adding 'Bio/Blast/_parser.py' 2026-03-29 19:10:36,939 wheel INFO adding 'Bio/Blast/_writers.py' 2026-03-29 19:10:36,940 wheel INFO adding 'Bio/CAPS/__init__.py' 2026-03-29 19:10:36,940 wheel INFO adding 'Bio/Cluster/__init__.py' 2026-03-29 19:10:36,941 wheel INFO adding 'Bio/Cluster/_cluster.cpython-314-loongarch64-linux-musl.so' 2026-03-29 19:10:36,943 wheel INFO adding 'Bio/Cluster/cluster.c' 2026-03-29 19:10:36,944 wheel INFO adding 'Bio/Cluster/cluster.h' 2026-03-29 19:10:36,944 wheel INFO adding 'Bio/Cluster/clustermodule.c' 2026-03-29 19:10:36,945 wheel INFO adding 'Bio/Compass/__init__.py' 2026-03-29 19:10:36,946 wheel INFO adding 'Bio/Data/CodonTable.py' 2026-03-29 19:10:36,946 wheel INFO adding 'Bio/Data/IUPACData.py' 2026-03-29 19:10:36,947 wheel INFO adding 'Bio/Data/PDBData.py' 2026-03-29 19:10:36,947 wheel INFO adding 'Bio/Data/__init__.py' 2026-03-29 19:10:36,948 wheel INFO adding 'Bio/Emboss/Primer3.py' 2026-03-29 19:10:36,948 wheel INFO adding 'Bio/Emboss/PrimerSearch.py' 2026-03-29 19:10:36,948 wheel INFO adding 'Bio/Emboss/__init__.py' 2026-03-29 19:10:36,949 wheel INFO adding 'Bio/Entrez/Parser.py' 2026-03-29 19:10:36,949 wheel INFO adding 'Bio/Entrez/__init__.py' 2026-03-29 19:10:36,951 wheel INFO adding 'Bio/Entrez/DTDs/BITS-embedded-index2.ent' 2026-03-29 19:10:36,951 wheel INFO adding 'Bio/Entrez/DTDs/BITS-question-answer2.ent' 2026-03-29 19:10:36,952 wheel INFO adding 'Bio/Entrez/DTDs/Docsum_3_0.dtd' 2026-03-29 19:10:36,952 wheel INFO adding 'Bio/Entrez/DTDs/Docsum_3_0.mod.dtd' 2026-03-29 19:10:36,952 wheel INFO adding 'Bio/Entrez/DTDs/Docsum_3_1.dtd' 2026-03-29 19:10:36,953 wheel INFO adding 'Bio/Entrez/DTDs/Docsum_3_1.mod.dtd' 2026-03-29 19:10:36,953 wheel INFO adding 'Bio/Entrez/DTDs/Docsum_3_2.dtd' 2026-03-29 19:10:36,954 wheel INFO adding 'Bio/Entrez/DTDs/Docsum_3_2.mod.dtd' 2026-03-29 19:10:36,954 wheel INFO adding 'Bio/Entrez/DTDs/Docsum_3_3.dtd' 2026-03-29 19:10:36,955 wheel INFO adding 'Bio/Entrez/DTDs/Docsum_3_3.mod.dtd' 2026-03-29 19:10:36,955 wheel INFO adding 'Bio/Entrez/DTDs/Docsum_3_4.dtd' 2026-03-29 19:10:36,956 wheel INFO adding 'Bio/Entrez/DTDs/Docsum_3_4.mod.dtd' 2026-03-29 19:10:36,956 wheel INFO adding 'Bio/Entrez/DTDs/EMBL_General.dtd' 2026-03-29 19:10:36,957 wheel INFO adding 'Bio/Entrez/DTDs/EMBL_General.mod.dtd' 2026-03-29 19:10:36,957 wheel INFO adding 'Bio/Entrez/DTDs/GenBank_General.dtd' 2026-03-29 19:10:36,957 wheel INFO adding 'Bio/Entrez/DTDs/GenBank_General.mod.dtd' 2026-03-29 19:10:36,957 wheel INFO adding 'Bio/Entrez/DTDs/HomoloGene.dtd' 2026-03-29 19:10:36,958 wheel INFO adding 'Bio/Entrez/DTDs/HomoloGene.mod.dtd' 2026-03-29 19:10:36,958 wheel INFO adding 'Bio/Entrez/DTDs/INSD_INSDSeq.dtd' 2026-03-29 19:10:36,958 wheel INFO adding 'Bio/Entrez/DTDs/INSD_INSDSeq.mod.dtd' 2026-03-29 19:10:36,959 wheel INFO adding 'Bio/Entrez/DTDs/JATS-XHTMLtablesetup1-3.ent' 2026-03-29 19:10:36,959 wheel INFO adding 'Bio/Entrez/DTDs/JATS-ali-namespace1-3.ent' 2026-03-29 19:10:36,960 wheel INFO adding 'Bio/Entrez/DTDs/JATS-archivearticle1-3-mathml3.dtd' 2026-03-29 19:10:36,961 wheel INFO adding 'Bio/Entrez/DTDs/JATS-archivecustom-classes1-3.ent' 2026-03-29 19:10:36,961 wheel INFO adding 'Bio/Entrez/DTDs/JATS-archivecustom-mixes1-3.ent' 2026-03-29 19:10:36,962 wheel INFO adding 'Bio/Entrez/DTDs/JATS-archivecustom-models1-3.ent' 2026-03-29 19:10:36,963 wheel INFO adding 'Bio/Entrez/DTDs/JATS-archivecustom-modules1-3.ent' 2026-03-29 19:10:36,963 wheel INFO adding 'Bio/Entrez/DTDs/JATS-articlemeta1-3.ent' 2026-03-29 19:10:36,965 wheel INFO adding 'Bio/Entrez/DTDs/JATS-backmatter1-3.ent' 2026-03-29 19:10:36,965 wheel INFO adding 'Bio/Entrez/DTDs/JATS-chars1-3.ent' 2026-03-29 19:10:36,966 wheel INFO adding 'Bio/Entrez/DTDs/JATS-common-atts1-3.ent' 2026-03-29 19:10:36,967 wheel INFO adding 'Bio/Entrez/DTDs/JATS-common1-3.ent' 2026-03-29 19:10:36,969 wheel INFO adding 'Bio/Entrez/DTDs/JATS-default-classes1-3.ent' 2026-03-29 19:10:36,969 wheel INFO adding 'Bio/Entrez/DTDs/JATS-default-mixes1-3.ent' 2026-03-29 19:10:36,970 wheel INFO adding 'Bio/Entrez/DTDs/JATS-display1-3.ent' 2026-03-29 19:10:36,971 wheel INFO adding 'Bio/Entrez/DTDs/JATS-format1-3.ent' 2026-03-29 19:10:36,972 wheel INFO adding 'Bio/Entrez/DTDs/JATS-funding1-3.ent' 2026-03-29 19:10:36,972 wheel INFO adding 'Bio/Entrez/DTDs/JATS-journalmeta1-3.ent' 2026-03-29 19:10:36,973 wheel INFO adding 'Bio/Entrez/DTDs/JATS-link1-3.ent' 2026-03-29 19:10:36,974 wheel INFO adding 'Bio/Entrez/DTDs/JATS-list1-3.ent' 2026-03-29 19:10:36,974 wheel INFO adding 'Bio/Entrez/DTDs/JATS-math1-3.ent' 2026-03-29 19:10:36,975 wheel INFO adding 'Bio/Entrez/DTDs/JATS-mathml3-mathmlsetup1-3.ent' 2026-03-29 19:10:36,975 wheel INFO adding 'Bio/Entrez/DTDs/JATS-mathml3-modules1-3.ent' 2026-03-29 19:10:36,976 wheel INFO adding 'Bio/Entrez/DTDs/JATS-modules1-3.ent' 2026-03-29 19:10:36,976 wheel INFO adding 'Bio/Entrez/DTDs/JATS-nlmcitation1-3.ent' 2026-03-29 19:10:36,977 wheel INFO adding 'Bio/Entrez/DTDs/JATS-notat1-3.ent' 2026-03-29 19:10:36,977 wheel INFO adding 'Bio/Entrez/DTDs/JATS-para1-3.ent' 2026-03-29 19:10:36,978 wheel INFO adding 'Bio/Entrez/DTDs/JATS-phrase1-3.ent' 2026-03-29 19:10:36,978 wheel INFO adding 'Bio/Entrez/DTDs/JATS-references1-3.ent' 2026-03-29 19:10:36,979 wheel INFO adding 'Bio/Entrez/DTDs/JATS-related-object1-3.ent' 2026-03-29 19:10:36,980 wheel INFO adding 'Bio/Entrez/DTDs/JATS-section1-3.ent' 2026-03-29 19:10:36,980 wheel INFO adding 'Bio/Entrez/DTDs/JATS-xmlspecchars1-3.ent' 2026-03-29 19:10:36,981 wheel INFO adding 'Bio/Entrez/DTDs/MMDB.dtd' 2026-03-29 19:10:36,981 wheel INFO adding 'Bio/Entrez/DTDs/MMDB.mod.dtd' 2026-03-29 19:10:36,981 wheel INFO adding 'Bio/Entrez/DTDs/MMDB_Chemical_graph.dtd' 2026-03-29 19:10:36,982 wheel INFO adding 'Bio/Entrez/DTDs/MMDB_Chemical_graph.mod.dtd' 2026-03-29 19:10:36,982 wheel INFO adding 'Bio/Entrez/DTDs/MMDB_Features.dtd' 2026-03-29 19:10:36,983 wheel INFO adding 'Bio/Entrez/DTDs/MMDB_Features.mod.dtd' 2026-03-29 19:10:36,983 wheel INFO adding 'Bio/Entrez/DTDs/MMDB_Structural_model.dtd' 2026-03-29 19:10:36,983 wheel INFO adding 'Bio/Entrez/DTDs/MMDB_Structural_model.mod.dtd' 2026-03-29 19:10:36,984 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Access.dtd' 2026-03-29 19:10:36,984 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Access.mod.dtd' 2026-03-29 19:10:36,985 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Biblio.dtd' 2026-03-29 19:10:36,985 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Biblio.mod.dtd' 2026-03-29 19:10:36,985 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_BioSource.dtd' 2026-03-29 19:10:36,986 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_BioSource.mod.dtd' 2026-03-29 19:10:36,986 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_BioTree.dtd' 2026-03-29 19:10:36,986 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_BioTree.mod.dtd' 2026-03-29 19:10:36,987 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Blast4.dtd' 2026-03-29 19:10:36,987 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Blast4.mod.dtd' 2026-03-29 19:10:36,987 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_BlastDL.dtd' 2026-03-29 19:10:36,988 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_BlastDL.mod.dtd' 2026-03-29 19:10:36,988 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_BlastOutput.dtd' 2026-03-29 19:10:36,988 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_BlastOutput.mod.dtd' 2026-03-29 19:10:36,989 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Cdd.dtd' 2026-03-29 19:10:36,989 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Cdd.mod.dtd' 2026-03-29 19:10:36,990 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Cn3d.dtd' 2026-03-29 19:10:36,990 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Cn3d.mod.dtd' 2026-03-29 19:10:36,990 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Entity.mod.dtd' 2026-03-29 19:10:36,991 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Entrez2.dtd' 2026-03-29 19:10:36,991 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Entrez2.mod.dtd' 2026-03-29 19:10:36,992 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Entrezgene.dtd' 2026-03-29 19:10:36,992 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Entrezgene.mod.dtd' 2026-03-29 19:10:36,992 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_FeatDef.dtd' 2026-03-29 19:10:36,993 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_FeatDef.mod.dtd' 2026-03-29 19:10:36,993 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_GBSeq.dtd' 2026-03-29 19:10:36,993 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_GBSeq.mod.dtd' 2026-03-29 19:10:36,994 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Gene.dtd' 2026-03-29 19:10:36,994 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Gene.mod.dtd' 2026-03-29 19:10:36,994 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_General.dtd' 2026-03-29 19:10:36,995 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_General.mod.dtd' 2026-03-29 19:10:36,995 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_ID1Access.dtd' 2026-03-29 19:10:36,995 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_ID1Access.mod.dtd' 2026-03-29 19:10:36,996 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_ID2Access.dtd' 2026-03-29 19:10:36,996 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_ID2Access.mod.dtd' 2026-03-29 19:10:36,996 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_MedArchive.dtd' 2026-03-29 19:10:36,997 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_MedArchive.mod.dtd' 2026-03-29 19:10:36,997 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Medlars.dtd' 2026-03-29 19:10:36,997 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Medlars.mod.dtd' 2026-03-29 19:10:36,998 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Medline.dtd' 2026-03-29 19:10:36,998 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Medline.mod.dtd' 2026-03-29 19:10:36,998 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Mim.dtd' 2026-03-29 19:10:36,999 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Mim.mod.dtd' 2026-03-29 19:10:36,999 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Mime.dtd' 2026-03-29 19:10:36,999 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Mime.mod.dtd' 2026-03-29 19:10:37,000 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_ObjPrt.dtd' 2026-03-29 19:10:37,000 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_ObjPrt.mod.dtd' 2026-03-29 19:10:37,000 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Organism.dtd' 2026-03-29 19:10:37,001 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Organism.mod.dtd' 2026-03-29 19:10:37,001 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_PCAssay.dtd' 2026-03-29 19:10:37,001 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_PCAssay.mod.dtd' 2026-03-29 19:10:37,002 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_PCSubstance.dtd' 2026-03-29 19:10:37,002 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_PCSubstance.mod.dtd' 2026-03-29 19:10:37,003 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Project.dtd' 2026-03-29 19:10:37,003 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Project.mod.dtd' 2026-03-29 19:10:37,003 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Protein.dtd' 2026-03-29 19:10:37,004 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Protein.mod.dtd' 2026-03-29 19:10:37,004 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Pub.dtd' 2026-03-29 19:10:37,004 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Pub.mod.dtd' 2026-03-29 19:10:37,005 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_PubMed.dtd' 2026-03-29 19:10:37,005 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_PubMed.mod.dtd' 2026-03-29 19:10:37,005 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_RNA.dtd' 2026-03-29 19:10:37,006 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_RNA.mod.dtd' 2026-03-29 19:10:37,006 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Remap.dtd' 2026-03-29 19:10:37,006 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Remap.mod.dtd' 2026-03-29 19:10:37,007 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Rsite.dtd' 2026-03-29 19:10:37,007 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Rsite.mod.dtd' 2026-03-29 19:10:37,007 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_ScoreMat.dtd' 2026-03-29 19:10:37,008 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_ScoreMat.mod.dtd' 2026-03-29 19:10:37,008 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_SeqCode.dtd' 2026-03-29 19:10:37,008 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_SeqCode.mod.dtd' 2026-03-29 19:10:37,009 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_SeqTable.dtd' 2026-03-29 19:10:37,009 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_SeqTable.mod.dtd' 2026-03-29 19:10:37,009 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Seq_split.dtd' 2026-03-29 19:10:37,010 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Seq_split.mod.dtd' 2026-03-29 19:10:37,010 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Seqalign.dtd' 2026-03-29 19:10:37,010 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Seqalign.mod.dtd' 2026-03-29 19:10:37,011 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Seqfeat.dtd' 2026-03-29 19:10:37,011 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Seqfeat.mod.dtd' 2026-03-29 19:10:37,012 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Seqloc.dtd' 2026-03-29 19:10:37,012 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Seqloc.mod.dtd' 2026-03-29 19:10:37,012 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Seqres.dtd' 2026-03-29 19:10:37,013 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Seqres.mod.dtd' 2026-03-29 19:10:37,013 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Seqset.dtd' 2026-03-29 19:10:37,013 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Seqset.mod.dtd' 2026-03-29 19:10:37,014 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Sequence.dtd' 2026-03-29 19:10:37,014 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Sequence.mod.dtd' 2026-03-29 19:10:37,014 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Submit.dtd' 2026-03-29 19:10:37,015 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Submit.mod.dtd' 2026-03-29 19:10:37,015 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Systems.dtd' 2026-03-29 19:10:37,015 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_TSeq.dtd' 2026-03-29 19:10:37,016 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_TSeq.mod.dtd' 2026-03-29 19:10:37,016 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_TxInit.dtd' 2026-03-29 19:10:37,016 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_TxInit.mod.dtd' 2026-03-29 19:10:37,017 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Variation.dtd' 2026-03-29 19:10:37,017 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_Variation.mod.dtd' 2026-03-29 19:10:37,018 wheel INFO adding 'Bio/Entrez/DTDs/NCBI_all.dtd' 2026-03-29 19:10:37,018 wheel INFO adding 'Bio/Entrez/DTDs/NSE.dtd' 2026-03-29 19:10:37,018 wheel INFO adding 'Bio/Entrez/DTDs/NSE.mod.dtd' 2026-03-29 19:10:37,019 wheel INFO adding 'Bio/Entrez/DTDs/OMSSA.dtd' 2026-03-29 19:10:37,019 wheel INFO adding 'Bio/Entrez/DTDs/OMSSA.mod.dtd' 2026-03-29 19:10:37,020 wheel INFO adding 'Bio/Entrez/DTDs/PDB_General.dtd' 2026-03-29 19:10:37,020 wheel INFO adding 'Bio/Entrez/DTDs/PDB_General.mod.dtd' 2026-03-29 19:10:37,020 wheel INFO adding 'Bio/Entrez/DTDs/PIR_General.dtd' 2026-03-29 19:10:37,021 wheel INFO adding 'Bio/Entrez/DTDs/PIR_General.mod.dtd' 2026-03-29 19:10:37,021 wheel INFO adding 'Bio/Entrez/DTDs/PRF_General.dtd' 2026-03-29 19:10:37,021 wheel INFO adding 'Bio/Entrez/DTDs/PRF_General.mod.dtd' 2026-03-29 19:10:37,021 wheel INFO adding 'Bio/Entrez/DTDs/SP_General.dtd' 2026-03-29 19:10:37,022 wheel INFO adding 'Bio/Entrez/DTDs/SP_General.mod.dtd' 2026-03-29 19:10:37,022 wheel INFO adding 'Bio/Entrez/DTDs/XHTMLtablesetup.ent' 2026-03-29 19:10:37,023 wheel INFO adding 'Bio/Entrez/DTDs/archivearticle.dtd' 2026-03-29 19:10:37,023 wheel INFO adding 'Bio/Entrez/DTDs/archivecustom-classes.ent' 2026-03-29 19:10:37,024 wheel INFO adding 'Bio/Entrez/DTDs/archivecustom-mixes.ent' 2026-03-29 19:10:37,024 wheel INFO adding 'Bio/Entrez/DTDs/archivecustom-models.ent' 2026-03-29 19:10:37,025 wheel INFO adding 'Bio/Entrez/DTDs/archivecustom-modules.ent' 2026-03-29 19:10:37,025 wheel INFO adding 'Bio/Entrez/DTDs/articlemeta.ent' 2026-03-29 19:10:37,026 wheel INFO adding 'Bio/Entrez/DTDs/backmatter.ent' 2026-03-29 19:10:37,027 wheel INFO adding 'Bio/Entrez/DTDs/bookdoc_100301.dtd' 2026-03-29 19:10:37,027 wheel INFO adding 'Bio/Entrez/DTDs/bookdoc_110101.dtd' 2026-03-29 19:10:37,027 wheel INFO adding 'Bio/Entrez/DTDs/bookdoc_120101.dtd' 2026-03-29 19:10:37,028 wheel INFO adding 'Bio/Entrez/DTDs/bookdoc_130101.dtd' 2026-03-29 19:10:37,028 wheel INFO adding 'Bio/Entrez/DTDs/bookdoc_140101.dtd' 2026-03-29 19:10:37,028 wheel INFO adding 'Bio/Entrez/DTDs/bookdoc_150101.dtd' 2026-03-29 19:10:37,029 wheel INFO adding 'Bio/Entrez/DTDs/chars.ent' 2026-03-29 19:10:37,029 wheel INFO adding 'Bio/Entrez/DTDs/common.ent' 2026-03-29 19:10:37,031 wheel INFO adding 'Bio/Entrez/DTDs/default-classes.ent' 2026-03-29 19:10:37,031 wheel INFO adding 'Bio/Entrez/DTDs/default-mixes.ent' 2026-03-29 19:10:37,032 wheel INFO adding 'Bio/Entrez/DTDs/display.ent' 2026-03-29 19:10:37,033 wheel INFO adding 'Bio/Entrez/DTDs/eInfo_020511.dtd' 2026-03-29 19:10:37,033 wheel INFO adding 'Bio/Entrez/DTDs/eLink_090910.dtd' 2026-03-29 19:10:37,033 wheel INFO adding 'Bio/Entrez/DTDs/eLink_101123.dtd' 2026-03-29 19:10:37,034 wheel INFO adding 'Bio/Entrez/DTDs/ePost_020511.dtd' 2026-03-29 19:10:37,034 wheel INFO adding 'Bio/Entrez/DTDs/eSearch_020511.dtd' 2026-03-29 19:10:37,034 wheel INFO adding 'Bio/Entrez/DTDs/eSpell.dtd' 2026-03-29 19:10:37,035 wheel INFO adding 'Bio/Entrez/DTDs/eSummary_041029.dtd' 2026-03-29 19:10:37,035 wheel INFO adding 'Bio/Entrez/DTDs/egquery.dtd' 2026-03-29 19:10:37,035 wheel INFO adding 'Bio/Entrez/DTDs/einfo.dtd' 2026-03-29 19:10:37,035 wheel INFO adding 'Bio/Entrez/DTDs/elink.dtd' 2026-03-29 19:10:37,036 wheel INFO adding 'Bio/Entrez/DTDs/elink_020122.dtd' 2026-03-29 19:10:37,036 wheel INFO adding 'Bio/Entrez/DTDs/epost.dtd' 2026-03-29 19:10:37,036 wheel INFO adding 'Bio/Entrez/DTDs/esearch.dtd' 2026-03-29 19:10:37,037 wheel INFO adding 'Bio/Entrez/DTDs/esummary-v1.dtd' 2026-03-29 19:10:37,037 wheel INFO adding 'Bio/Entrez/DTDs/esummary_clinvar.dtd' 2026-03-29 19:10:37,037 wheel INFO adding 'Bio/Entrez/DTDs/esummary_gene.dtd' 2026-03-29 19:10:37,038 wheel INFO adding 'Bio/Entrez/DTDs/format.ent' 2026-03-29 19:10:37,038 wheel INFO adding 'Bio/Entrez/DTDs/htmltable.dtd' 2026-03-29 19:10:37,039 wheel INFO adding 'Bio/Entrez/DTDs/isoamsa.ent' 2026-03-29 19:10:37,039 wheel INFO adding 'Bio/Entrez/DTDs/isoamsb.ent' 2026-03-29 19:10:37,039 wheel INFO adding 'Bio/Entrez/DTDs/isoamsc.ent' 2026-03-29 19:10:37,040 wheel INFO adding 'Bio/Entrez/DTDs/isoamsn.ent' 2026-03-29 19:10:37,040 wheel INFO adding 'Bio/Entrez/DTDs/isoamso.ent' 2026-03-29 19:10:37,040 wheel INFO adding 'Bio/Entrez/DTDs/isoamsr.ent' 2026-03-29 19:10:37,041 wheel INFO adding 'Bio/Entrez/DTDs/isobox.ent' 2026-03-29 19:10:37,041 wheel INFO adding 'Bio/Entrez/DTDs/isocyr1.ent' 2026-03-29 19:10:37,041 wheel INFO adding 'Bio/Entrez/DTDs/isocyr2.ent' 2026-03-29 19:10:37,042 wheel INFO adding 'Bio/Entrez/DTDs/isodia.ent' 2026-03-29 19:10:37,042 wheel INFO adding 'Bio/Entrez/DTDs/isogrk1.ent' 2026-03-29 19:10:37,042 wheel INFO adding 'Bio/Entrez/DTDs/isogrk2.ent' 2026-03-29 19:10:37,043 wheel INFO adding 'Bio/Entrez/DTDs/isogrk3.ent' 2026-03-29 19:10:37,043 wheel INFO adding 'Bio/Entrez/DTDs/isogrk4.ent' 2026-03-29 19:10:37,043 wheel INFO adding 'Bio/Entrez/DTDs/isolat1.ent' 2026-03-29 19:10:37,044 wheel INFO adding 'Bio/Entrez/DTDs/isolat2.ent' 2026-03-29 19:10:37,044 wheel INFO adding 'Bio/Entrez/DTDs/isomfrk.ent' 2026-03-29 19:10:37,044 wheel INFO adding 'Bio/Entrez/DTDs/isomopf.ent' 2026-03-29 19:10:37,045 wheel INFO adding 'Bio/Entrez/DTDs/isomscr.ent' 2026-03-29 19:10:37,045 wheel INFO adding 'Bio/Entrez/DTDs/isonum.ent' 2026-03-29 19:10:37,045 wheel INFO adding 'Bio/Entrez/DTDs/isopub.ent' 2026-03-29 19:10:37,046 wheel INFO adding 'Bio/Entrez/DTDs/isotech.ent' 2026-03-29 19:10:37,046 wheel INFO adding 'Bio/Entrez/DTDs/journalmeta.ent' 2026-03-29 19:10:37,047 wheel INFO adding 'Bio/Entrez/DTDs/link.ent' 2026-03-29 19:10:37,047 wheel INFO adding 'Bio/Entrez/DTDs/list.ent' 2026-03-29 19:10:37,048 wheel INFO adding 'Bio/Entrez/DTDs/math.ent' 2026-03-29 19:10:37,048 wheel INFO adding 'Bio/Entrez/DTDs/mathml-in-pubmed.mod' 2026-03-29 19:10:37,049 wheel INFO adding 'Bio/Entrez/DTDs/mathml2-qname-1.mod' 2026-03-29 19:10:37,049 wheel INFO adding 'Bio/Entrez/DTDs/mathml2.dtd' 2026-03-29 19:10:37,050 wheel INFO adding 'Bio/Entrez/DTDs/mathml3-qname1.mod' 2026-03-29 19:10:37,050 wheel INFO adding 'Bio/Entrez/DTDs/mathml3.dtd' 2026-03-29 19:10:37,051 wheel INFO adding 'Bio/Entrez/DTDs/mathmlsetup.ent' 2026-03-29 19:10:37,051 wheel INFO adding 'Bio/Entrez/DTDs/mmlalias.ent' 2026-03-29 19:10:37,052 wheel INFO adding 'Bio/Entrez/DTDs/mmlextra.ent' 2026-03-29 19:10:37,052 wheel INFO adding 'Bio/Entrez/DTDs/modules.ent' 2026-03-29 19:10:37,053 wheel INFO adding 'Bio/Entrez/DTDs/nlm-articleset-2.0.dtd' 2026-03-29 19:10:37,053 wheel INFO adding 'Bio/Entrez/DTDs/nlmcatalogrecordset_170601.dtd' 2026-03-29 19:10:37,054 wheel INFO adding 'Bio/Entrez/DTDs/nlmcommon_011101.dtd' 2026-03-29 19:10:37,054 wheel INFO adding 'Bio/Entrez/DTDs/nlmcommon_080101.dtd' 2026-03-29 19:10:37,054 wheel INFO adding 'Bio/Entrez/DTDs/nlmcommon_090101.dtd' 2026-03-29 19:10:37,055 wheel INFO adding 'Bio/Entrez/DTDs/nlmmedline_011101.dtd' 2026-03-29 19:10:37,055 wheel INFO adding 'Bio/Entrez/DTDs/nlmmedline_080101.dtd' 2026-03-29 19:10:37,055 wheel INFO adding 'Bio/Entrez/DTDs/nlmmedline_090101.dtd' 2026-03-29 19:10:37,056 wheel INFO adding 'Bio/Entrez/DTDs/nlmmedlinecitation_011101.dtd' 2026-03-29 19:10:37,056 wheel INFO adding 'Bio/Entrez/DTDs/nlmmedlinecitation_080101.dtd' 2026-03-29 19:10:37,056 wheel INFO adding 'Bio/Entrez/DTDs/nlmmedlinecitation_090101.dtd' 2026-03-29 19:10:37,057 wheel INFO adding 'Bio/Entrez/DTDs/nlmmedlinecitationset_100101.dtd' 2026-03-29 19:10:37,057 wheel INFO adding 'Bio/Entrez/DTDs/nlmmedlinecitationset_100301.dtd' 2026-03-29 19:10:37,058 wheel INFO adding 'Bio/Entrez/DTDs/nlmmedlinecitationset_110101.dtd' 2026-03-29 19:10:37,058 wheel INFO adding 'Bio/Entrez/DTDs/nlmmedlinecitationset_120101.dtd' 2026-03-29 19:10:37,058 wheel INFO adding 'Bio/Entrez/DTDs/nlmmedlinecitationset_130101.dtd' 2026-03-29 19:10:37,059 wheel INFO adding 'Bio/Entrez/DTDs/nlmmedlinecitationset_130501.dtd' 2026-03-29 19:10:37,059 wheel INFO adding 'Bio/Entrez/DTDs/nlmmedlinecitationset_140101.dtd' 2026-03-29 19:10:37,059 wheel INFO adding 'Bio/Entrez/DTDs/nlmmedlinecitationset_150101.dtd' 2026-03-29 19:10:37,060 wheel INFO adding 'Bio/Entrez/DTDs/nlmserials_080101.dtd' 2026-03-29 19:10:37,060 wheel INFO adding 'Bio/Entrez/DTDs/nlmserials_100101.dtd' 2026-03-29 19:10:37,060 wheel INFO adding 'Bio/Entrez/DTDs/nlmsharedcatcit_080101.dtd' 2026-03-29 19:10:37,061 wheel INFO adding 'Bio/Entrez/DTDs/nlmsharedcatcit_090101.dtd' 2026-03-29 19:10:37,061 wheel INFO adding 'Bio/Entrez/DTDs/notat.ent' 2026-03-29 19:10:37,061 wheel INFO adding 'Bio/Entrez/DTDs/para.ent' 2026-03-29 19:10:37,062 wheel INFO adding 'Bio/Entrez/DTDs/phrase.ent' 2026-03-29 19:10:37,062 wheel INFO adding 'Bio/Entrez/DTDs/pmc-1.dtd' 2026-03-29 19:10:37,063 wheel INFO adding 'Bio/Entrez/DTDs/pubmed_020114.dtd' 2026-03-29 19:10:37,063 wheel INFO adding 'Bio/Entrez/DTDs/pubmed_080101.dtd' 2026-03-29 19:10:37,064 wheel INFO adding 'Bio/Entrez/DTDs/pubmed_090101.dtd' 2026-03-29 19:10:37,064 wheel INFO adding 'Bio/Entrez/DTDs/pubmed_100101.dtd' 2026-03-29 19:10:37,064 wheel INFO adding 'Bio/Entrez/DTDs/pubmed_100301.dtd' 2026-03-29 19:10:37,065 wheel INFO adding 'Bio/Entrez/DTDs/pubmed_110101.dtd' 2026-03-29 19:10:37,065 wheel INFO adding 'Bio/Entrez/DTDs/pubmed_120101.dtd' 2026-03-29 19:10:37,065 wheel INFO adding 'Bio/Entrez/DTDs/pubmed_130101.dtd' 2026-03-29 19:10:37,065 wheel INFO adding 'Bio/Entrez/DTDs/pubmed_130501.dtd' 2026-03-29 19:10:37,066 wheel INFO adding 'Bio/Entrez/DTDs/pubmed_140101.dtd' 2026-03-29 19:10:37,066 wheel INFO adding 'Bio/Entrez/DTDs/pubmed_150101.dtd' 2026-03-29 19:10:37,066 wheel INFO adding 'Bio/Entrez/DTDs/pubmed_180101.dtd' 2026-03-29 19:10:37,067 wheel INFO adding 'Bio/Entrez/DTDs/pubmed_180601.dtd' 2026-03-29 19:10:37,067 wheel INFO adding 'Bio/Entrez/DTDs/pubmed_190101.dtd' 2026-03-29 19:10:37,068 wheel INFO adding 'Bio/Entrez/DTDs/references.ent' 2026-03-29 19:10:37,068 wheel INFO adding 'Bio/Entrez/DTDs/section.ent' 2026-03-29 19:10:37,069 wheel INFO adding 'Bio/Entrez/DTDs/taxon.dtd' 2026-03-29 19:10:37,069 wheel INFO adding 'Bio/Entrez/DTDs/xhtml-inlstyle-1.mod' 2026-03-29 19:10:37,070 wheel INFO adding 'Bio/Entrez/DTDs/xhtml-table-1.mod' 2026-03-29 19:10:37,070 wheel INFO adding 'Bio/Entrez/DTDs/xmlspecchars.ent' 2026-03-29 19:10:37,070 wheel INFO adding 'Bio/Entrez/XSDs/IPGReportSet.xsd' 2026-03-29 19:10:37,071 wheel INFO adding 'Bio/Entrez/XSDs/NCBI_BlastOutput2.mod.xsd' 2026-03-29 19:10:37,071 wheel INFO adding 'Bio/Entrez/XSDs/NCBI_BlastOutput2.xsd' 2026-03-29 19:10:37,071 wheel INFO adding 'Bio/ExPASy/Enzyme.py' 2026-03-29 19:10:37,072 wheel INFO adding 'Bio/ExPASy/Prodoc.py' 2026-03-29 19:10:37,072 wheel INFO adding 'Bio/ExPASy/Prosite.py' 2026-03-29 19:10:37,073 wheel INFO adding 'Bio/ExPASy/ScanProsite.py' 2026-03-29 19:10:37,073 wheel INFO adding 'Bio/ExPASy/__init__.py' 2026-03-29 19:10:37,073 wheel INFO adding 'Bio/ExPASy/cellosaurus.py' 2026-03-29 19:10:37,074 wheel INFO adding 'Bio/GenBank/Record.py' 2026-03-29 19:10:37,074 wheel INFO adding 'Bio/GenBank/Scanner.py' 2026-03-29 19:10:37,075 wheel INFO adding 'Bio/GenBank/__init__.py' 2026-03-29 19:10:37,076 wheel INFO adding 'Bio/GenBank/utils.py' 2026-03-29 19:10:37,076 wheel INFO adding 'Bio/Geo/Record.py' 2026-03-29 19:10:37,077 wheel INFO adding 'Bio/Geo/__init__.py' 2026-03-29 19:10:37,077 wheel INFO adding 'Bio/Graphics/BasicChromosome.py' 2026-03-29 19:10:37,078 wheel INFO adding 'Bio/Graphics/ColorSpiral.py' 2026-03-29 19:10:37,078 wheel INFO adding 'Bio/Graphics/Comparative.py' 2026-03-29 19:10:37,078 wheel INFO adding 'Bio/Graphics/DisplayRepresentation.py' 2026-03-29 19:10:37,079 wheel INFO adding 'Bio/Graphics/Distribution.py' 2026-03-29 19:10:37,079 wheel INFO adding 'Bio/Graphics/KGML_vis.py' 2026-03-29 19:10:37,079 wheel INFO adding 'Bio/Graphics/__init__.py' 2026-03-29 19:10:37,080 wheel INFO adding 'Bio/Graphics/GenomeDiagram/_AbstractDrawer.py' 2026-03-29 19:10:37,080 wheel INFO adding 'Bio/Graphics/GenomeDiagram/_CircularDrawer.py' 2026-03-29 19:10:37,081 wheel INFO adding 'Bio/Graphics/GenomeDiagram/_Colors.py' 2026-03-29 19:10:37,082 wheel INFO adding 'Bio/Graphics/GenomeDiagram/_CrossLink.py' 2026-03-29 19:10:37,082 wheel INFO adding 'Bio/Graphics/GenomeDiagram/_Diagram.py' 2026-03-29 19:10:37,082 wheel INFO adding 'Bio/Graphics/GenomeDiagram/_Feature.py' 2026-03-29 19:10:37,083 wheel INFO adding 'Bio/Graphics/GenomeDiagram/_FeatureSet.py' 2026-03-29 19:10:37,083 wheel INFO adding 'Bio/Graphics/GenomeDiagram/_Graph.py' 2026-03-29 19:10:37,083 wheel INFO adding 'Bio/Graphics/GenomeDiagram/_GraphSet.py' 2026-03-29 19:10:37,084 wheel INFO adding 'Bio/Graphics/GenomeDiagram/_LinearDrawer.py' 2026-03-29 19:10:37,085 wheel INFO adding 'Bio/Graphics/GenomeDiagram/_Track.py' 2026-03-29 19:10:37,085 wheel INFO adding 'Bio/Graphics/GenomeDiagram/__init__.py' 2026-03-29 19:10:37,085 wheel INFO adding 'Bio/HMM/__init__.py' 2026-03-29 19:10:37,086 wheel INFO adding 'Bio/KEGG/REST.py' 2026-03-29 19:10:37,086 wheel INFO adding 'Bio/KEGG/__init__.py' 2026-03-29 19:10:37,087 wheel INFO adding 'Bio/KEGG/Compound/__init__.py' 2026-03-29 19:10:37,087 wheel INFO adding 'Bio/KEGG/Enzyme/__init__.py' 2026-03-29 19:10:37,087 wheel INFO adding 'Bio/KEGG/Gene/__init__.py' 2026-03-29 19:10:37,088 wheel INFO adding 'Bio/KEGG/KGML/KGML_parser.py' 2026-03-29 19:10:37,088 wheel INFO adding 'Bio/KEGG/KGML/KGML_pathway.py' 2026-03-29 19:10:37,089 wheel INFO adding 'Bio/KEGG/KGML/__init__.py' 2026-03-29 19:10:37,089 wheel INFO adding 'Bio/KEGG/Map/__init__.py' 2026-03-29 19:10:37,089 wheel INFO adding 'Bio/Medline/__init__.py' 2026-03-29 19:10:37,090 wheel INFO adding 'Bio/NMR/NOEtools.py' 2026-03-29 19:10:37,090 wheel INFO adding 'Bio/NMR/__init__.py' 2026-03-29 19:10:37,090 wheel INFO adding 'Bio/NMR/xpktools.py' 2026-03-29 19:10:37,091 wheel INFO adding 'Bio/Nexus/Nexus.py' 2026-03-29 19:10:37,092 wheel INFO adding 'Bio/Nexus/Nodes.py' 2026-03-29 19:10:37,092 wheel INFO adding 'Bio/Nexus/StandardData.py' 2026-03-29 19:10:37,093 wheel INFO adding 'Bio/Nexus/Trees.py' 2026-03-29 19:10:37,093 wheel INFO adding 'Bio/Nexus/__init__.py' 2026-03-29 19:10:37,093 wheel INFO adding 'Bio/Nexus/cnexus.c' 2026-03-29 19:10:37,094 wheel INFO adding 'Bio/Nexus/cnexus.cpython-314-loongarch64-linux-musl.so' 2026-03-29 19:10:37,095 wheel INFO adding 'Bio/PDB/AbstractPropertyMap.py' 2026-03-29 19:10:37,095 wheel INFO adding 'Bio/PDB/Atom.py' 2026-03-29 19:10:37,096 wheel INFO adding 'Bio/PDB/Chain.py' 2026-03-29 19:10:37,096 wheel INFO adding 'Bio/PDB/DSSP.py' 2026-03-29 19:10:37,096 wheel INFO adding 'Bio/PDB/Dice.py' 2026-03-29 19:10:37,097 wheel INFO adding 'Bio/PDB/Entity.py' 2026-03-29 19:10:37,097 wheel INFO adding 'Bio/PDB/FragmentMapper.py' 2026-03-29 19:10:37,098 wheel INFO adding 'Bio/PDB/HSExposure.py' 2026-03-29 19:10:37,098 wheel INFO adding 'Bio/PDB/MMCIF2Dict.py' 2026-03-29 19:10:37,098 wheel INFO adding 'Bio/PDB/MMCIFParser.py' 2026-03-29 19:10:37,099 wheel INFO adding 'Bio/PDB/Model.py' 2026-03-29 19:10:37,099 wheel INFO adding 'Bio/PDB/NACCESS.py' 2026-03-29 19:10:37,100 wheel INFO adding 'Bio/PDB/NeighborSearch.py' 2026-03-29 19:10:37,100 wheel INFO adding 'Bio/PDB/PDBExceptions.py' 2026-03-29 19:10:37,100 wheel INFO adding 'Bio/PDB/PDBIO.py' 2026-03-29 19:10:37,101 wheel INFO adding 'Bio/PDB/PDBList.py' 2026-03-29 19:10:37,101 wheel INFO adding 'Bio/PDB/PDBMLParser.py' 2026-03-29 19:10:37,102 wheel INFO adding 'Bio/PDB/PDBParser.py' 2026-03-29 19:10:37,102 wheel INFO adding 'Bio/PDB/PICIO.py' 2026-03-29 19:10:37,103 wheel INFO adding 'Bio/PDB/PSEA.py' 2026-03-29 19:10:37,103 wheel INFO adding 'Bio/PDB/Polypeptide.py' 2026-03-29 19:10:37,103 wheel INFO adding 'Bio/PDB/Residue.py' 2026-03-29 19:10:37,104 wheel INFO adding 'Bio/PDB/ResidueDepth.py' 2026-03-29 19:10:37,104 wheel INFO adding 'Bio/PDB/SASA.py' 2026-03-29 19:10:37,105 wheel INFO adding 'Bio/PDB/SCADIO.py' 2026-03-29 19:10:37,105 wheel INFO adding 'Bio/PDB/Selection.py' 2026-03-29 19:10:37,106 wheel INFO adding 'Bio/PDB/Structure.py' 2026-03-29 19:10:37,106 wheel INFO adding 'Bio/PDB/StructureAlignment.py' 2026-03-29 19:10:37,106 wheel INFO adding 'Bio/PDB/StructureBuilder.py' 2026-03-29 19:10:37,107 wheel INFO adding 'Bio/PDB/Superimposer.py' 2026-03-29 19:10:37,107 wheel INFO adding 'Bio/PDB/__init__.py' 2026-03-29 19:10:37,107 wheel INFO adding 'Bio/PDB/_bcif_helper.cpython-314-loongarch64-linux-musl.so' 2026-03-29 19:10:37,108 wheel INFO adding 'Bio/PDB/alphafold_db.py' 2026-03-29 19:10:37,109 wheel INFO adding 'Bio/PDB/bcifhelpermodule.c' 2026-03-29 19:10:37,109 wheel INFO adding 'Bio/PDB/binary_cif.py' 2026-03-29 19:10:37,109 wheel INFO adding 'Bio/PDB/ccealign.cpython-314-loongarch64-linux-musl.so' 2026-03-29 19:10:37,110 wheel INFO adding 'Bio/PDB/ccealignmodule.c' 2026-03-29 19:10:37,111 wheel INFO adding 'Bio/PDB/cealign.py' 2026-03-29 19:10:37,111 wheel INFO adding 'Bio/PDB/ic_data.py' 2026-03-29 19:10:37,112 wheel INFO adding 'Bio/PDB/ic_rebuild.py' 2026-03-29 19:10:37,113 wheel INFO adding 'Bio/PDB/internal_coords.py' 2026-03-29 19:10:37,114 wheel INFO adding 'Bio/PDB/kdtrees.c' 2026-03-29 19:10:37,115 wheel INFO adding 'Bio/PDB/kdtrees.cpython-314-loongarch64-linux-musl.so' 2026-03-29 19:10:37,116 wheel INFO adding 'Bio/PDB/mmcifio.py' 2026-03-29 19:10:37,116 wheel INFO adding 'Bio/PDB/parse_pdb_header.py' 2026-03-29 19:10:37,117 wheel INFO adding 'Bio/PDB/qcprot.py' 2026-03-29 19:10:37,117 wheel INFO adding 'Bio/PDB/vectors.py' 2026-03-29 19:10:37,118 wheel INFO adding 'Bio/PDB/mmtf/DefaultParser.py' 2026-03-29 19:10:37,118 wheel INFO adding 'Bio/PDB/mmtf/__init__.py' 2026-03-29 19:10:37,118 wheel INFO adding 'Bio/PDB/mmtf/mmtfio.py' 2026-03-29 19:10:37,119 wheel INFO adding 'Bio/Pathway/__init__.py' 2026-03-29 19:10:37,119 wheel INFO adding 'Bio/Pathway/Rep/Graph.py' 2026-03-29 19:10:37,120 wheel INFO adding 'Bio/Pathway/Rep/MultiGraph.py' 2026-03-29 19:10:37,120 wheel INFO adding 'Bio/Pathway/Rep/__init__.py' 2026-03-29 19:10:37,120 wheel INFO adding 'Bio/Phylo/BaseTree.py' 2026-03-29 19:10:37,121 wheel INFO adding 'Bio/Phylo/CDAO.py' 2026-03-29 19:10:37,121 wheel INFO adding 'Bio/Phylo/CDAOIO.py' 2026-03-29 19:10:37,122 wheel INFO adding 'Bio/Phylo/Consensus.py' 2026-03-29 19:10:37,122 wheel INFO adding 'Bio/Phylo/NeXML.py' 2026-03-29 19:10:37,123 wheel INFO adding 'Bio/Phylo/NeXMLIO.py' 2026-03-29 19:10:37,123 wheel INFO adding 'Bio/Phylo/Newick.py' 2026-03-29 19:10:37,123 wheel INFO adding 'Bio/Phylo/NewickIO.py' 2026-03-29 19:10:37,124 wheel INFO adding 'Bio/Phylo/NexusIO.py' 2026-03-29 19:10:37,124 wheel INFO adding 'Bio/Phylo/PhyloXML.py' 2026-03-29 19:10:37,125 wheel INFO adding 'Bio/Phylo/PhyloXMLIO.py' 2026-03-29 19:10:37,125 wheel INFO adding 'Bio/Phylo/TreeConstruction.py' 2026-03-29 19:10:37,126 wheel INFO adding 'Bio/Phylo/__init__.py' 2026-03-29 19:10:37,127 wheel INFO adding 'Bio/Phylo/_cdao_owl.py' 2026-03-29 19:10:37,128 wheel INFO adding 'Bio/Phylo/_io.py' 2026-03-29 19:10:37,128 wheel INFO adding 'Bio/Phylo/_utils.py' 2026-03-29 19:10:37,129 wheel INFO adding 'Bio/Phylo/PAML/__init__.py' 2026-03-29 19:10:37,129 wheel INFO adding 'Bio/Phylo/PAML/_paml.py' 2026-03-29 19:10:37,129 wheel INFO adding 'Bio/Phylo/PAML/_parse_baseml.py' 2026-03-29 19:10:37,130 wheel INFO adding 'Bio/Phylo/PAML/_parse_codeml.py' 2026-03-29 19:10:37,130 wheel INFO adding 'Bio/Phylo/PAML/_parse_yn00.py' 2026-03-29 19:10:37,130 wheel INFO adding 'Bio/Phylo/PAML/baseml.py' 2026-03-29 19:10:37,131 wheel INFO adding 'Bio/Phylo/PAML/chi2.py' 2026-03-29 19:10:37,131 wheel INFO adding 'Bio/Phylo/PAML/codeml.py' 2026-03-29 19:10:37,131 wheel INFO adding 'Bio/Phylo/PAML/yn00.py' 2026-03-29 19:10:37,132 wheel INFO adding 'Bio/PopGen/__init__.py' 2026-03-29 19:10:37,132 wheel INFO adding 'Bio/PopGen/GenePop/FileParser.py' 2026-03-29 19:10:37,133 wheel INFO adding 'Bio/PopGen/GenePop/LargeFileParser.py' 2026-03-29 19:10:37,133 wheel INFO adding 'Bio/PopGen/GenePop/__init__.py' 2026-03-29 19:10:37,133 wheel INFO adding 'Bio/Restriction/PrintFormat.py' 2026-03-29 19:10:37,134 wheel INFO adding 'Bio/Restriction/Restriction.py' 2026-03-29 19:10:37,136 wheel INFO adding 'Bio/Restriction/Restriction_Dictionary.py' 2026-03-29 19:10:37,140 wheel INFO adding 'Bio/Restriction/__init__.py' 2026-03-29 19:10:37,140 wheel INFO adding 'Bio/SCOP/Cla.py' 2026-03-29 19:10:37,141 wheel INFO adding 'Bio/SCOP/Des.py' 2026-03-29 19:10:37,141 wheel INFO adding 'Bio/SCOP/Dom.py' 2026-03-29 19:10:37,141 wheel INFO adding 'Bio/SCOP/Hie.py' 2026-03-29 19:10:37,142 wheel INFO adding 'Bio/SCOP/Raf.py' 2026-03-29 19:10:37,142 wheel INFO adding 'Bio/SCOP/Residues.py' 2026-03-29 19:10:37,142 wheel INFO adding 'Bio/SCOP/__init__.py' 2026-03-29 19:10:37,143 wheel INFO adding 'Bio/SVDSuperimposer/__init__.py' 2026-03-29 19:10:37,143 wheel INFO adding 'Bio/SearchIO/BlatIO.py' 2026-03-29 19:10:37,144 wheel INFO adding 'Bio/SearchIO/FastaIO.py' 2026-03-29 19:10:37,144 wheel INFO adding 'Bio/SearchIO/__init__.py' 2026-03-29 19:10:37,145 wheel INFO adding 'Bio/SearchIO/_index.py' 2026-03-29 19:10:37,145 wheel INFO adding 'Bio/SearchIO/_utils.py' 2026-03-29 19:10:37,146 wheel INFO adding 'Bio/SearchIO/BlastIO/__init__.py' 2026-03-29 19:10:37,146 wheel INFO adding 'Bio/SearchIO/BlastIO/blast_tab.py' 2026-03-29 19:10:37,147 wheel INFO adding 'Bio/SearchIO/BlastIO/blast_xml.py' 2026-03-29 19:10:37,147 wheel INFO adding 'Bio/SearchIO/ExonerateIO/__init__.py' 2026-03-29 19:10:37,148 wheel INFO adding 'Bio/SearchIO/ExonerateIO/_base.py' 2026-03-29 19:10:37,148 wheel INFO adding 'Bio/SearchIO/ExonerateIO/exonerate_cigar.py' 2026-03-29 19:10:37,149 wheel INFO adding 'Bio/SearchIO/ExonerateIO/exonerate_text.py' 2026-03-29 19:10:37,149 wheel INFO adding 'Bio/SearchIO/ExonerateIO/exonerate_vulgar.py' 2026-03-29 19:10:37,149 wheel INFO adding 'Bio/SearchIO/HHsuiteIO/__init__.py' 2026-03-29 19:10:37,150 wheel INFO adding 'Bio/SearchIO/HHsuiteIO/hhsuite2_text.py' 2026-03-29 19:10:37,150 wheel INFO adding 'Bio/SearchIO/HmmerIO/__init__.py' 2026-03-29 19:10:37,151 wheel INFO adding 'Bio/SearchIO/HmmerIO/_base.py' 2026-03-29 19:10:37,151 wheel INFO adding 'Bio/SearchIO/HmmerIO/hmmer2_text.py' 2026-03-29 19:10:37,151 wheel INFO adding 'Bio/SearchIO/HmmerIO/hmmer3_domtab.py' 2026-03-29 19:10:37,152 wheel INFO adding 'Bio/SearchIO/HmmerIO/hmmer3_tab.py' 2026-03-29 19:10:37,152 wheel INFO adding 'Bio/SearchIO/HmmerIO/hmmer3_text.py' 2026-03-29 19:10:37,153 wheel INFO adding 'Bio/SearchIO/InfernalIO/__init__.py' 2026-03-29 19:10:37,153 wheel INFO adding 'Bio/SearchIO/InfernalIO/_base.py' 2026-03-29 19:10:37,154 wheel INFO adding 'Bio/SearchIO/InfernalIO/infernal_tab.py' 2026-03-29 19:10:37,154 wheel INFO adding 'Bio/SearchIO/InfernalIO/infernal_text.py' 2026-03-29 19:10:37,155 wheel INFO adding 'Bio/SearchIO/InterproscanIO/__init__.py' 2026-03-29 19:10:37,155 wheel INFO adding 'Bio/SearchIO/InterproscanIO/interproscan_xml.py' 2026-03-29 19:10:37,155 wheel INFO adding 'Bio/SearchIO/_model/__init__.py' 2026-03-29 19:10:37,156 wheel INFO adding 'Bio/SearchIO/_model/_base.py' 2026-03-29 19:10:37,156 wheel INFO adding 'Bio/SearchIO/_model/hit.py' 2026-03-29 19:10:37,157 wheel INFO adding 'Bio/SearchIO/_model/hsp.py' 2026-03-29 19:10:37,157 wheel INFO adding 'Bio/SearchIO/_model/query.py' 2026-03-29 19:10:37,158 wheel INFO adding 'Bio/SeqIO/AbiIO.py' 2026-03-29 19:10:37,158 wheel INFO adding 'Bio/SeqIO/AceIO.py' 2026-03-29 19:10:37,159 wheel INFO adding 'Bio/SeqIO/FastaIO.py' 2026-03-29 19:10:37,159 wheel INFO adding 'Bio/SeqIO/GckIO.py' 2026-03-29 19:10:37,160 wheel INFO adding 'Bio/SeqIO/GfaIO.py' 2026-03-29 19:10:37,160 wheel INFO adding 'Bio/SeqIO/IgIO.py' 2026-03-29 19:10:37,160 wheel INFO adding 'Bio/SeqIO/InsdcIO.py' 2026-03-29 19:10:37,161 wheel INFO adding 'Bio/SeqIO/Interfaces.py' 2026-03-29 19:10:37,161 wheel INFO adding 'Bio/SeqIO/NibIO.py' 2026-03-29 19:10:37,162 wheel INFO adding 'Bio/SeqIO/PdbIO.py' 2026-03-29 19:10:37,162 wheel INFO adding 'Bio/SeqIO/PhdIO.py' 2026-03-29 19:10:37,163 wheel INFO adding 'Bio/SeqIO/PirIO.py' 2026-03-29 19:10:37,163 wheel INFO adding 'Bio/SeqIO/QualityIO.py' 2026-03-29 19:10:37,164 wheel INFO adding 'Bio/SeqIO/SeqXmlIO.py' 2026-03-29 19:10:37,165 wheel INFO adding 'Bio/SeqIO/SffIO.py' 2026-03-29 19:10:37,166 wheel INFO adding 'Bio/SeqIO/SnapGeneIO.py' 2026-03-29 19:10:37,166 wheel INFO adding 'Bio/SeqIO/SwissIO.py' 2026-03-29 19:10:37,166 wheel INFO adding 'Bio/SeqIO/TabIO.py' 2026-03-29 19:10:37,167 wheel INFO adding 'Bio/SeqIO/TwoBitIO.py' 2026-03-29 19:10:37,167 wheel INFO adding 'Bio/SeqIO/UniprotIO.py' 2026-03-29 19:10:37,168 wheel INFO adding 'Bio/SeqIO/XdnaIO.py' 2026-03-29 19:10:37,168 wheel INFO adding 'Bio/SeqIO/__init__.py' 2026-03-29 19:10:37,169 wheel INFO adding 'Bio/SeqIO/_index.py' 2026-03-29 19:10:37,169 wheel INFO adding 'Bio/SeqIO/_twoBitIO.c' 2026-03-29 19:10:37,170 wheel INFO adding 'Bio/SeqIO/_twoBitIO.cpython-314-loongarch64-linux-musl.so' 2026-03-29 19:10:37,171 wheel INFO adding 'Bio/SeqUtils/CheckSum.py' 2026-03-29 19:10:37,171 wheel INFO adding 'Bio/SeqUtils/IsoelectricPoint.py' 2026-03-29 19:10:37,171 wheel INFO adding 'Bio/SeqUtils/MeltingTemp.py' 2026-03-29 19:10:37,172 wheel INFO adding 'Bio/SeqUtils/ProtParam.py' 2026-03-29 19:10:37,173 wheel INFO adding 'Bio/SeqUtils/ProtParamData.py' 2026-03-29 19:10:37,173 wheel INFO adding 'Bio/SeqUtils/__init__.py' 2026-03-29 19:10:37,173 wheel INFO adding 'Bio/SeqUtils/lcc.py' 2026-03-29 19:10:37,174 wheel INFO adding 'Bio/Sequencing/Ace.py' 2026-03-29 19:10:37,174 wheel INFO adding 'Bio/Sequencing/Phd.py' 2026-03-29 19:10:37,175 wheel INFO adding 'Bio/Sequencing/__init__.py' 2026-03-29 19:10:37,175 wheel INFO adding 'Bio/SwissProt/KeyWList.py' 2026-03-29 19:10:37,175 wheel INFO adding 'Bio/SwissProt/__init__.py' 2026-03-29 19:10:37,176 wheel INFO adding 'Bio/TogoWS/__init__.py' 2026-03-29 19:10:37,176 wheel INFO adding 'Bio/UniGene/__init__.py' 2026-03-29 19:10:37,177 wheel INFO adding 'Bio/UniProt/GOA.py' 2026-03-29 19:10:37,177 wheel INFO adding 'Bio/UniProt/__init__.py' 2026-03-29 19:10:37,178 wheel INFO adding 'Bio/codonalign/__init__.py' 2026-03-29 19:10:37,178 wheel INFO adding 'Bio/codonalign/codonalignment.py' 2026-03-29 19:10:37,179 wheel INFO adding 'Bio/codonalign/codonseq.py' 2026-03-29 19:10:37,180 wheel INFO adding 'Bio/motifs/__init__.py' 2026-03-29 19:10:37,180 wheel INFO adding 'Bio/motifs/_pwm.c' 2026-03-29 19:10:37,181 wheel INFO adding 'Bio/motifs/_pwm.cpython-314-loongarch64-linux-musl.so' 2026-03-29 19:10:37,181 wheel INFO adding 'Bio/motifs/alignace.py' 2026-03-29 19:10:37,182 wheel INFO adding 'Bio/motifs/clusterbuster.py' 2026-03-29 19:10:37,182 wheel INFO adding 'Bio/motifs/mast.py' 2026-03-29 19:10:37,182 wheel INFO adding 'Bio/motifs/matrix.py' 2026-03-29 19:10:37,183 wheel INFO adding 'Bio/motifs/meme.py' 2026-03-29 19:10:37,183 wheel INFO adding 'Bio/motifs/minimal.py' 2026-03-29 19:10:37,184 wheel INFO adding 'Bio/motifs/pfm.py' 2026-03-29 19:10:37,184 wheel INFO adding 'Bio/motifs/thresholds.py' 2026-03-29 19:10:37,184 wheel INFO adding 'Bio/motifs/transfac.py' 2026-03-29 19:10:37,185 wheel INFO adding 'Bio/motifs/xms.py' 2026-03-29 19:10:37,185 wheel INFO adding 'Bio/motifs/jaspar/__init__.py' 2026-03-29 19:10:37,186 wheel INFO adding 'Bio/motifs/jaspar/db.py' 2026-03-29 19:10:37,186 wheel INFO adding 'Bio/phenotype/__init__.py' 2026-03-29 19:10:37,187 wheel INFO adding 'Bio/phenotype/phen_micro.py' 2026-03-29 19:10:37,187 wheel INFO adding 'Bio/phenotype/pm_fitting.py' 2026-03-29 19:10:37,188 wheel INFO adding 'BioSQL/BioSeq.py' 2026-03-29 19:10:37,188 wheel INFO adding 'BioSQL/BioSeqDatabase.py' 2026-03-29 19:10:37,189 wheel INFO adding 'BioSQL/DBUtils.py' 2026-03-29 19:10:37,189 wheel INFO adding 'BioSQL/Loader.py' 2026-03-29 19:10:37,190 wheel INFO adding 'BioSQL/__init__.py' 2026-03-29 19:10:37,190 wheel INFO adding 'BioSQL/py.typed' 2026-03-29 19:10:37,190 wheel INFO adding 'biopython-1.86.dist-info/licenses/LICENSE' 2026-03-29 19:10:37,191 wheel INFO adding 'biopython-1.86.dist-info/licenses/LICENSE.rst' 2026-03-29 19:10:37,191 wheel INFO adding 'biopython-1.86.dist-info/METADATA' 2026-03-29 19:10:37,191 wheel INFO adding 'biopython-1.86.dist-info/WHEEL' 2026-03-29 19:10:37,192 wheel INFO adding 'biopython-1.86.dist-info/top_level.txt' 2026-03-29 19:10:37,195 wheel INFO adding 'biopython-1.86.dist-info/RECORD' 2026-03-29 19:10:37,197 root INFO removing build/bdist.linux-loongarch64/wheel 2026-03-29 19:10:37,227 gpep517 INFO The backend produced .dist/biopython-1.86-cp314-cp314-linux_loongarch64.whl biopython-1.86-cp314-cp314-linux_loongarch64.whl >>> py3-biopython: Entering fakeroot... >>> py3-biopython-pyc*: Running split function pyc... 'usr/lib/python3.14/site-packages/Bio/PopGen/GenePop/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/PopGen/GenePop/__pycache__' 'usr/lib/python3.14/site-packages/Bio/PopGen/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/PopGen/__pycache__' 'usr/lib/python3.14/site-packages/Bio/NMR/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/NMR/__pycache__' 'usr/lib/python3.14/site-packages/Bio/ExPASy/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/ExPASy/__pycache__' 'usr/lib/python3.14/site-packages/Bio/AlignIO/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/AlignIO/__pycache__' 'usr/lib/python3.14/site-packages/Bio/CAPS/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/CAPS/__pycache__' 'usr/lib/python3.14/site-packages/Bio/Blast/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/Blast/__pycache__' 'usr/lib/python3.14/site-packages/Bio/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/__pycache__' 'usr/lib/python3.14/site-packages/Bio/Emboss/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/Emboss/__pycache__' 'usr/lib/python3.14/site-packages/Bio/TogoWS/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/TogoWS/__pycache__' 'usr/lib/python3.14/site-packages/Bio/PDB/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/PDB/__pycache__' 'usr/lib/python3.14/site-packages/Bio/PDB/mmtf/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/PDB/mmtf/__pycache__' 'usr/lib/python3.14/site-packages/Bio/SwissProt/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/SwissProt/__pycache__' 'usr/lib/python3.14/site-packages/Bio/SeqUtils/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/SeqUtils/__pycache__' 'usr/lib/python3.14/site-packages/Bio/Geo/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/Geo/__pycache__' 'usr/lib/python3.14/site-packages/Bio/UniProt/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/UniProt/__pycache__' 'usr/lib/python3.14/site-packages/Bio/SCOP/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/SCOP/__pycache__' 'usr/lib/python3.14/site-packages/Bio/SearchIO/InfernalIO/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/SearchIO/InfernalIO/__pycache__' 'usr/lib/python3.14/site-packages/Bio/SearchIO/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/SearchIO/__pycache__' 'usr/lib/python3.14/site-packages/Bio/SearchIO/_model/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/SearchIO/_model/__pycache__' 'usr/lib/python3.14/site-packages/Bio/SearchIO/BlastIO/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/SearchIO/BlastIO/__pycache__' 'usr/lib/python3.14/site-packages/Bio/SearchIO/HmmerIO/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/SearchIO/HmmerIO/__pycache__' 'usr/lib/python3.14/site-packages/Bio/SearchIO/InterproscanIO/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/SearchIO/InterproscanIO/__pycache__' 'usr/lib/python3.14/site-packages/Bio/SearchIO/ExonerateIO/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/SearchIO/ExonerateIO/__pycache__' 'usr/lib/python3.14/site-packages/Bio/SearchIO/HHsuiteIO/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/SearchIO/HHsuiteIO/__pycache__' 'usr/lib/python3.14/site-packages/Bio/codonalign/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/codonalign/__pycache__' 'usr/lib/python3.14/site-packages/Bio/Sequencing/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/Sequencing/__pycache__' 'usr/lib/python3.14/site-packages/Bio/Pathway/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/Pathway/__pycache__' 'usr/lib/python3.14/site-packages/Bio/Pathway/Rep/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/Pathway/Rep/__pycache__' 'usr/lib/python3.14/site-packages/Bio/Compass/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/Compass/__pycache__' 'usr/lib/python3.14/site-packages/Bio/GenBank/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/GenBank/__pycache__' 'usr/lib/python3.14/site-packages/Bio/motifs/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/motifs/__pycache__' 'usr/lib/python3.14/site-packages/Bio/motifs/jaspar/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/motifs/jaspar/__pycache__' 'usr/lib/python3.14/site-packages/Bio/Medline/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/Medline/__pycache__' 'usr/lib/python3.14/site-packages/Bio/SeqIO/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/SeqIO/__pycache__' 'usr/lib/python3.14/site-packages/Bio/UniGene/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/UniGene/__pycache__' 'usr/lib/python3.14/site-packages/Bio/Align/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/Align/__pycache__' 'usr/lib/python3.14/site-packages/Bio/Align/substitution_matrices/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/Align/substitution_matrices/__pycache__' 'usr/lib/python3.14/site-packages/Bio/Phylo/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/Phylo/__pycache__' 'usr/lib/python3.14/site-packages/Bio/Phylo/PAML/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/Phylo/PAML/__pycache__' 'usr/lib/python3.14/site-packages/Bio/phenotype/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/phenotype/__pycache__' 'usr/lib/python3.14/site-packages/Bio/Alphabet/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/Alphabet/__pycache__' 'usr/lib/python3.14/site-packages/Bio/Restriction/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/Restriction/__pycache__' 'usr/lib/python3.14/site-packages/Bio/Entrez/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/Entrez/__pycache__' 'usr/lib/python3.14/site-packages/Bio/SVDSuperimposer/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/SVDSuperimposer/__pycache__' 'usr/lib/python3.14/site-packages/Bio/Cluster/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/Cluster/__pycache__' 'usr/lib/python3.14/site-packages/Bio/Nexus/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/Nexus/__pycache__' 'usr/lib/python3.14/site-packages/Bio/Data/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/Data/__pycache__' 'usr/lib/python3.14/site-packages/Bio/KEGG/Compound/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/KEGG/Compound/__pycache__' 'usr/lib/python3.14/site-packages/Bio/KEGG/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/KEGG/__pycache__' 'usr/lib/python3.14/site-packages/Bio/KEGG/Gene/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/KEGG/Gene/__pycache__' 'usr/lib/python3.14/site-packages/Bio/KEGG/Map/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/KEGG/Map/__pycache__' 'usr/lib/python3.14/site-packages/Bio/KEGG/Enzyme/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/KEGG/Enzyme/__pycache__' 'usr/lib/python3.14/site-packages/Bio/KEGG/KGML/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/KEGG/KGML/__pycache__' 'usr/lib/python3.14/site-packages/Bio/Graphics/GenomeDiagram/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/Graphics/GenomeDiagram/__pycache__' 'usr/lib/python3.14/site-packages/Bio/Graphics/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/Graphics/__pycache__' 'usr/lib/python3.14/site-packages/Bio/Affy/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/Affy/__pycache__' 'usr/lib/python3.14/site-packages/Bio/HMM/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/HMM/__pycache__' 'usr/lib/python3.14/site-packages/BioSQL/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/BioSQL/__pycache__' >>> py3-biopython-pyc*: Preparing subpackage py3-biopython-pyc... >>> py3-biopython-pyc*: Running postcheck for py3-biopython-pyc >>> py3-biopython*: Running postcheck for py3-biopython >>> py3-biopython*: Preparing package py3-biopython... >>> py3-biopython*: Stripping binaries >>> py3-biopython*: Scanning shared objects >>> py3-biopython-pyc*: Tracing dependencies... python3~3.14 >>> py3-biopython-pyc*: Package size: 6.2 MB >>> py3-biopython-pyc*: Compressing data... >>> py3-biopython-pyc*: Create checksum... >>> py3-biopython-pyc*: Create py3-biopython-pyc-1.86-r1.apk >>> py3-biopython*: Tracing dependencies... py3-numpy python3 python3~3.14 so:libc.musl-loongarch64.so.1 >>> py3-biopython*: Package size: 11.4 MB >>> py3-biopython*: Compressing data... >>> py3-biopython*: Create checksum... >>> py3-biopython*: Create py3-biopython-1.86-r1.apk >>> py3-biopython: Build complete at Sun, 29 Mar 2026 19:10:41 +0000 elapsed time 0h 0m 34s >>> py3-biopython: Cleaning up srcdir >>> py3-biopython: Cleaning up pkgdir >>> py3-biopython: Cleaning up tmpdir >>> py3-biopython: Uninstalling dependencies... ( 1/31) Purging .makedepends-py3-biopython (20260329.191012) ( 2/31) Purging py3-gpep517-pyc (19-r2) ( 3/31) Purging py3-gpep517 (19-r2) ( 4/31) Purging py3-installer-pyc (0.7.0-r3) ( 5/31) Purging py3-installer (0.7.0-r3) ( 6/31) Purging py3-setuptools-pyc (82.0.1-r1) ( 7/31) Purging py3-setuptools (82.0.1-r1) ( 8/31) Purging py3-wheel-pyc (0.46.3-r1) ( 9/31) Purging py3-wheel (0.46.3-r1) (10/31) Purging py3-packaging-pyc (26.0-r1) (11/31) Purging py3-packaging (26.0-r1) (12/31) Purging py3-parsing-pyc (3.3.2-r1) (13/31) Purging py3-parsing (3.3.2-r1) (14/31) Purging py3-numpy-dev (2.4.3-r2) (15/31) Purging py3-numpy-tests (2.4.3-r2) (16/31) Purging py3-numpy-pyc (2.4.3-r2) (17/31) Purging py3-numpy (2.4.3-r2) (18/31) Purging openblas (0.3.30-r2) (19/31) Purging python3-dev (3.14.3-r0) (20/31) Purging python3-pyc (3.14.3-r0) (21/31) Purging python3-pycache-pyc0 (3.14.3-r0) (22/31) Purging pyc (3.14.3-r0) (23/31) Purging python3 (3.14.3-r0) (24/31) Purging gdbm (1.26-r0) (25/31) Purging libbz2 (1.0.8-r6) (26/31) Purging libffi (3.5.2-r0) (27/31) Purging libgfortran (15.2.0-r2) (28/31) Purging libpanelw (6.6_p20251231-r0) (29/31) Purging mpdecimal (4.0.1-r0) (30/31) Purging sqlite-libs (3.51.2-r1) (31/31) Purging xz-libs (5.8.2-r0) Executing busybox-1.37.0-r31.trigger OK: 269.6 MiB in 102 packages >>> py3-biopython: Updating the community/loongarch64 repository index... >>> py3-biopython: Signing the index...