>>> py3-biopython: Building community/py3-biopython 1.86-r1 (using abuild 3.16.0-r0) started Thu, 09 Apr 2026 23:42:02 +0000
>>> py3-biopython: Validating /home/buildozer/aports/community/py3-biopython/APKBUILD...
>>> py3-biopython: Analyzing dependencies...
>>> py3-biopython: Installing for build: build-base py3-numpy python3 py3-gpep517 py3-setuptools py3-wheel py3-numpy-dev python3-dev
( 1/30) Installing libbz2 (1.0.8-r6)
( 2/30) Installing libffi (3.5.2-r0)
( 3/30) Installing gdbm (1.26-r0)
( 4/30) Installing xz-libs (5.8.2-r0)
( 5/30) Installing mpdecimal (4.0.1-r0)
( 6/30) Installing libpanelw (6.6_p20251231-r0)
( 7/30) Installing sqlite-libs (3.51.2-r1)
( 8/30) Installing python3 (3.14.3-r0)
( 9/30) Installing python3-pycache-pyc0 (3.14.3-r0)
(10/30) Installing pyc (3.14.3-r0)
(11/30) Installing py3-numpy-pyc (2.4.4-r0)
(12/30) Installing python3-pyc (3.14.3-r0)
(13/30) Installing openblas (0.3.30-r2)
(14/30) Installing py3-numpy (2.4.4-r0)
(15/30) Installing py3-numpy-tests (2.4.4-r0)
(16/30) Installing py3-installer (1.0.0-r0)
(17/30) Installing py3-installer-pyc (1.0.0-r0)
(18/30) Installing py3-gpep517 (19-r2)
(19/30) Installing py3-gpep517-pyc (19-r2)
(20/30) Installing py3-parsing (3.3.2-r1)
(21/30) Installing py3-parsing-pyc (3.3.2-r1)
(22/30) Installing py3-packaging (26.0-r1)
(23/30) Installing py3-packaging-pyc (26.0-r1)
(24/30) Installing py3-setuptools (82.0.1-r1)
(25/30) Installing py3-setuptools-pyc (82.0.1-r1)
(26/30) Installing py3-wheel (0.46.3-r1)
(27/30) Installing py3-wheel-pyc (0.46.3-r1)
(28/30) Installing py3-numpy-dev (2.4.4-r0)
(29/30) Installing python3-dev (3.14.3-r0)
(30/30) Installing .makedepends-py3-biopython (20260409.234213)
Executing busybox-1.37.0-r31.trigger
OK: 758.9 MiB in 135 packages
>>> py3-biopython: Cleaning up srcdir
>>> py3-biopython: Cleaning up pkgdir
>>> py3-biopython: Cleaning up tmpdir
>>> py3-biopython: Fetching https://distfiles.alpinelinux.org/distfiles/edge/biopython-1.86.tar.gz
/var/cache/distfiles/edge/biopython-1.86.tar.gz: OK
>>> py3-biopython: Fetching https://distfiles.alpinelinux.org/distfiles/edge/biopython-1.86.tar.gz
/var/cache/distfiles/edge/biopython-1.86.tar.gz: OK
>>> py3-biopython: Unpacking /var/cache/distfiles/edge/biopython-1.86.tar.gz...
2026-04-09 23:42:23,922 gpep517 INFO Building wheel via backend setuptools.build_meta:__legacy__
/usr/lib/python3.14/site-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated.
!!

        ********************************************************************************
        Please consider removing the following classifiers in favor of a SPDX license expression:

        License :: Freely Distributable

        See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
        ********************************************************************************

!!
  self._finalize_license_expression()
2026-04-09 23:42:24,026 root INFO running bdist_wheel
2026-04-09 23:42:24,090 root INFO running build
2026-04-09 23:42:24,090 root INFO running build_py
2026-04-09 23:42:24,106 root INFO creating build/lib.linux-riscv64-cpython-314/Bio
2026-04-09 23:42:24,107 root INFO copying Bio/SeqRecord.py -> build/lib.linux-riscv64-cpython-314/Bio
2026-04-09 23:42:24,110 root INFO copying Bio/Seq.py -> build/lib.linux-riscv64-cpython-314/Bio
2026-04-09 23:42:24,112 root INFO copying Bio/bgzf.py -> build/lib.linux-riscv64-cpython-314/Bio
2026-04-09 23:42:24,114 root INFO copying Bio/__init__.py -> build/lib.linux-riscv64-cpython-314/Bio
2026-04-09 23:42:24,116 root INFO copying Bio/SeqFeature.py -> build/lib.linux-riscv64-cpython-314/Bio
2026-04-09 23:42:24,118 root INFO copying Bio/File.py -> build/lib.linux-riscv64-cpython-314/Bio
2026-04-09 23:42:24,120 root INFO copying Bio/_utils.py -> build/lib.linux-riscv64-cpython-314/Bio
2026-04-09 23:42:24,121 root INFO copying Bio/pairwise2.py -> build/lib.linux-riscv64-cpython-314/Bio
2026-04-09 23:42:24,124 root INFO creating build/lib.linux-riscv64-cpython-314/Bio/Affy
2026-04-09 23:42:24,125 root INFO copying Bio/Affy/__init__.py -> build/lib.linux-riscv64-cpython-314/Bio/Affy
2026-04-09 23:42:24,126 root INFO copying Bio/Affy/CelFile.py -> build/lib.linux-riscv64-cpython-314/Bio/Affy
2026-04-09 23:42:24,128 root INFO creating build/lib.linux-riscv64-cpython-314/Bio/Align
2026-04-09 23:42:24,129 root INFO copying Bio/Align/exonerate.py -> build/lib.linux-riscv64-cpython-314/Bio/Align
2026-04-09 23:42:24,131 root INFO copying Bio/Align/bigbed.py -> build/lib.linux-riscv64-cpython-314/Bio/Align
2026-04-09 23:42:24,133 root INFO copying Bio/Align/hhr.py -> build/lib.linux-riscv64-cpython-314/Bio/Align
2026-04-09 23:42:24,134 root INFO copying Bio/Align/chain.py -> build/lib.linux-riscv64-cpython-314/Bio/Align
2026-04-09 23:42:24,135 root INFO copying Bio/Align/__init__.py -> build/lib.linux-riscv64-cpython-314/Bio/Align
2026-04-09 23:42:24,138 root INFO copying Bio/Align/phylip.py -> build/lib.linux-riscv64-cpython-314/Bio/Align
2026-04-09 23:42:24,139 root INFO copying Bio/Align/bed.py -> build/lib.linux-riscv64-cpython-314/Bio/Align
2026-04-09 23:42:24,141 root INFO copying Bio/Align/AlignInfo.py -> build/lib.linux-riscv64-cpython-314/Bio/Align
2026-04-09 23:42:24,142 root INFO copying Bio/Align/bigpsl.py -> build/lib.linux-riscv64-cpython-314/Bio/Align
2026-04-09 23:42:24,144 root INFO copying Bio/Align/interfaces.py -> build/lib.linux-riscv64-cpython-314/Bio/Align
2026-04-09 23:42:24,145 root INFO copying Bio/Align/emboss.py -> build/lib.linux-riscv64-cpython-314/Bio/Align
2026-04-09 23:42:24,146 root INFO copying Bio/Align/analysis.py -> build/lib.linux-riscv64-cpython-314/Bio/Align
2026-04-09 23:42:24,148 root INFO copying Bio/Align/bigmaf.py -> build/lib.linux-riscv64-cpython-314/Bio/Align
2026-04-09 23:42:24,150 root INFO copying Bio/Align/stockholm.py -> build/lib.linux-riscv64-cpython-314/Bio/Align
2026-04-09 23:42:24,151 root INFO copying Bio/Align/clustal.py -> build/lib.linux-riscv64-cpython-314/Bio/Align
2026-04-09 23:42:24,152 root INFO copying Bio/Align/fasta.py -> build/lib.linux-riscv64-cpython-314/Bio/Align
2026-04-09 23:42:24,154 root INFO copying Bio/Align/maf.py -> build/lib.linux-riscv64-cpython-314/Bio/Align
2026-04-09 23:42:24,155 root INFO copying Bio/Align/nexus.py -> build/lib.linux-riscv64-cpython-314/Bio/Align
2026-04-09 23:42:24,157 root INFO copying Bio/Align/mauve.py -> build/lib.linux-riscv64-cpython-314/Bio/Align
2026-04-09 23:42:24,158 root INFO copying Bio/Align/sam.py -> build/lib.linux-riscv64-cpython-314/Bio/Align
2026-04-09 23:42:24,159 root INFO copying Bio/Align/psl.py -> build/lib.linux-riscv64-cpython-314/Bio/Align
2026-04-09 23:42:24,161 root INFO copying Bio/Align/a2m.py -> build/lib.linux-riscv64-cpython-314/Bio/Align
2026-04-09 23:42:24,162 root INFO copying Bio/Align/tabular.py -> build/lib.linux-riscv64-cpython-314/Bio/Align
2026-04-09 23:42:24,164 root INFO copying Bio/Align/msf.py -> build/lib.linux-riscv64-cpython-314/Bio/Align
2026-04-09 23:42:24,166 root INFO creating build/lib.linux-riscv64-cpython-314/Bio/Align/substitution_matrices
2026-04-09 23:42:24,166 root INFO copying Bio/Align/substitution_matrices/__init__.py -> build/lib.linux-riscv64-cpython-314/Bio/Align/substitution_matrices
2026-04-09 23:42:24,169 root INFO creating build/lib.linux-riscv64-cpython-314/Bio/AlignIO
2026-04-09 23:42:24,170 root INFO copying Bio/AlignIO/Interfaces.py -> build/lib.linux-riscv64-cpython-314/Bio/AlignIO
2026-04-09 23:42:24,171 root INFO copying Bio/AlignIO/MauveIO.py -> build/lib.linux-riscv64-cpython-314/Bio/AlignIO
2026-04-09 23:42:24,173 root INFO copying Bio/AlignIO/PhylipIO.py -> build/lib.linux-riscv64-cpython-314/Bio/AlignIO
2026-04-09 23:42:24,174 root INFO copying Bio/AlignIO/__init__.py -> build/lib.linux-riscv64-cpython-314/Bio/AlignIO
2026-04-09 23:42:24,175 root INFO copying Bio/AlignIO/MsfIO.py -> build/lib.linux-riscv64-cpython-314/Bio/AlignIO
2026-04-09 23:42:24,177 root INFO copying Bio/AlignIO/StockholmIO.py -> build/lib.linux-riscv64-cpython-314/Bio/AlignIO
2026-04-09 23:42:24,178 root INFO copying Bio/AlignIO/MafIO.py -> build/lib.linux-riscv64-cpython-314/Bio/AlignIO
2026-04-09 23:42:24,180 root INFO copying Bio/AlignIO/EmbossIO.py -> build/lib.linux-riscv64-cpython-314/Bio/AlignIO
2026-04-09 23:42:24,181 root INFO copying Bio/AlignIO/NexusIO.py -> build/lib.linux-riscv64-cpython-314/Bio/AlignIO
2026-04-09 23:42:24,183 root INFO copying Bio/AlignIO/FastaIO.py -> build/lib.linux-riscv64-cpython-314/Bio/AlignIO
2026-04-09 23:42:24,184 root INFO copying Bio/AlignIO/ClustalIO.py -> build/lib.linux-riscv64-cpython-314/Bio/AlignIO
2026-04-09 23:42:24,186 root INFO creating build/lib.linux-riscv64-cpython-314/Bio/Alphabet
2026-04-09 23:42:24,187 root INFO copying Bio/Alphabet/__init__.py -> build/lib.linux-riscv64-cpython-314/Bio/Alphabet
2026-04-09 23:42:24,188 root INFO creating build/lib.linux-riscv64-cpython-314/Bio/Blast
2026-04-09 23:42:24,189 root INFO copying Bio/Blast/NCBIWWW.py -> build/lib.linux-riscv64-cpython-314/Bio/Blast
2026-04-09 23:42:24,191 root INFO copying Bio/Blast/__init__.py -> build/lib.linux-riscv64-cpython-314/Bio/Blast
2026-04-09 23:42:24,192 root INFO copying Bio/Blast/_parser.py -> build/lib.linux-riscv64-cpython-314/Bio/Blast
2026-04-09 23:42:24,194 root INFO copying Bio/Blast/_writers.py -> build/lib.linux-riscv64-cpython-314/Bio/Blast
2026-04-09 23:42:24,196 root INFO copying Bio/Blast/NCBIXML.py -> build/lib.linux-riscv64-cpython-314/Bio/Blast
2026-04-09 23:42:24,198 root INFO creating build/lib.linux-riscv64-cpython-314/Bio/CAPS
2026-04-09 23:42:24,199 root INFO copying Bio/CAPS/__init__.py -> build/lib.linux-riscv64-cpython-314/Bio/CAPS
2026-04-09 23:42:24,200 root INFO creating build/lib.linux-riscv64-cpython-314/Bio/Cluster
2026-04-09 23:42:24,201 root INFO copying Bio/Cluster/__init__.py -> build/lib.linux-riscv64-cpython-314/Bio/Cluster
2026-04-09 23:42:24,203 root INFO creating build/lib.linux-riscv64-cpython-314/Bio/codonalign
2026-04-09 23:42:24,204 root INFO copying Bio/codonalign/codonalignment.py -> build/lib.linux-riscv64-cpython-314/Bio/codonalign
2026-04-09 23:42:24,205 root INFO copying Bio/codonalign/__init__.py -> build/lib.linux-riscv64-cpython-314/Bio/codonalign
2026-04-09 23:42:24,207 root INFO copying Bio/codonalign/codonseq.py -> build/lib.linux-riscv64-cpython-314/Bio/codonalign
2026-04-09 23:42:24,209 root INFO creating build/lib.linux-riscv64-cpython-314/Bio/Compass
2026-04-09 23:42:24,210 root INFO copying Bio/Compass/__init__.py -> build/lib.linux-riscv64-cpython-314/Bio/Compass
2026-04-09 23:42:24,212 root INFO creating build/lib.linux-riscv64-cpython-314/Bio/Data
2026-04-09 23:42:24,213 root INFO copying Bio/Data/CodonTable.py -> build/lib.linux-riscv64-cpython-314/Bio/Data
2026-04-09 23:42:24,214 root INFO copying Bio/Data/__init__.py -> build/lib.linux-riscv64-cpython-314/Bio/Data
2026-04-09 23:42:24,216 root INFO copying Bio/Data/PDBData.py -> build/lib.linux-riscv64-cpython-314/Bio/Data
2026-04-09 23:42:24,217 root INFO copying Bio/Data/IUPACData.py -> build/lib.linux-riscv64-cpython-314/Bio/Data
2026-04-09 23:42:24,219 root INFO creating build/lib.linux-riscv64-cpython-314/Bio/Emboss
2026-04-09 23:42:24,220 root INFO copying Bio/Emboss/PrimerSearch.py -> build/lib.linux-riscv64-cpython-314/Bio/Emboss
2026-04-09 23:42:24,221 root INFO copying Bio/Emboss/__init__.py -> build/lib.linux-riscv64-cpython-314/Bio/Emboss
2026-04-09 23:42:24,222 root INFO copying Bio/Emboss/Primer3.py -> build/lib.linux-riscv64-cpython-314/Bio/Emboss
2026-04-09 23:42:24,224 root INFO creating build/lib.linux-riscv64-cpython-314/Bio/Entrez
2026-04-09 23:42:24,225 root INFO copying Bio/Entrez/__init__.py -> build/lib.linux-riscv64-cpython-314/Bio/Entrez
2026-04-09 23:42:24,226 root INFO copying Bio/Entrez/Parser.py -> build/lib.linux-riscv64-cpython-314/Bio/Entrez
2026-04-09 23:42:24,231 root INFO creating build/lib.linux-riscv64-cpython-314/Bio/ExPASy
2026-04-09 23:42:24,232 root INFO copying Bio/ExPASy/cellosaurus.py -> build/lib.linux-riscv64-cpython-314/Bio/ExPASy
2026-04-09 23:42:24,233 root INFO copying Bio/ExPASy/__init__.py -> build/lib.linux-riscv64-cpython-314/Bio/ExPASy
2026-04-09 23:42:24,234 root INFO copying Bio/ExPASy/Enzyme.py -> build/lib.linux-riscv64-cpython-314/Bio/ExPASy
2026-04-09 23:42:24,236 root INFO copying Bio/ExPASy/Prodoc.py -> build/lib.linux-riscv64-cpython-314/Bio/ExPASy
2026-04-09 23:42:24,237 root INFO copying Bio/ExPASy/ScanProsite.py -> build/lib.linux-riscv64-cpython-314/Bio/ExPASy
2026-04-09 23:42:24,238 root INFO copying Bio/ExPASy/Prosite.py -> build/lib.linux-riscv64-cpython-314/Bio/ExPASy
2026-04-09 23:42:24,240 root INFO creating build/lib.linux-riscv64-cpython-314/Bio/GenBank
2026-04-09 23:42:24,241 root INFO copying Bio/GenBank/Record.py -> build/lib.linux-riscv64-cpython-314/Bio/GenBank
2026-04-09 23:42:24,243 root INFO copying Bio/GenBank/Scanner.py -> build/lib.linux-riscv64-cpython-314/Bio/GenBank
2026-04-09 23:42:24,245 root INFO copying Bio/GenBank/__init__.py -> build/lib.linux-riscv64-cpython-314/Bio/GenBank
2026-04-09 23:42:24,246 root INFO copying Bio/GenBank/utils.py -> build/lib.linux-riscv64-cpython-314/Bio/GenBank
2026-04-09 23:42:24,248 root INFO creating build/lib.linux-riscv64-cpython-314/Bio/Geo
2026-04-09 23:42:24,249 root INFO copying Bio/Geo/Record.py -> build/lib.linux-riscv64-cpython-314/Bio/Geo
2026-04-09 23:42:24,250 root INFO copying Bio/Geo/__init__.py -> build/lib.linux-riscv64-cpython-314/Bio/Geo
2026-04-09 23:42:24,252 root INFO creating build/lib.linux-riscv64-cpython-314/Bio/Graphics
2026-04-09 23:42:24,253 root INFO copying Bio/Graphics/ColorSpiral.py -> build/lib.linux-riscv64-cpython-314/Bio/Graphics
2026-04-09 23:42:24,254 root INFO copying Bio/Graphics/__init__.py -> build/lib.linux-riscv64-cpython-314/Bio/Graphics
2026-04-09 23:42:24,256 root INFO copying Bio/Graphics/KGML_vis.py -> build/lib.linux-riscv64-cpython-314/Bio/Graphics
2026-04-09 23:42:24,257 root INFO copying Bio/Graphics/Distribution.py -> build/lib.linux-riscv64-cpython-314/Bio/Graphics
2026-04-09 23:42:24,258 root INFO copying Bio/Graphics/BasicChromosome.py -> build/lib.linux-riscv64-cpython-314/Bio/Graphics
2026-04-09 23:42:24,260 root INFO copying Bio/Graphics/DisplayRepresentation.py -> build/lib.linux-riscv64-cpython-314/Bio/Graphics
2026-04-09 23:42:24,261 root INFO copying Bio/Graphics/Comparative.py -> build/lib.linux-riscv64-cpython-314/Bio/Graphics
2026-04-09 23:42:24,263 root INFO creating build/lib.linux-riscv64-cpython-314/Bio/Graphics/GenomeDiagram
2026-04-09 23:42:24,264 root INFO copying Bio/Graphics/GenomeDiagram/_CrossLink.py -> build/lib.linux-riscv64-cpython-314/Bio/Graphics/GenomeDiagram
2026-04-09 23:42:24,266 root INFO copying Bio/Graphics/GenomeDiagram/__init__.py -> build/lib.linux-riscv64-cpython-314/Bio/Graphics/GenomeDiagram
2026-04-09 23:42:24,267 root INFO copying Bio/Graphics/GenomeDiagram/_AbstractDrawer.py -> build/lib.linux-riscv64-cpython-314/Bio/Graphics/GenomeDiagram
2026-04-09 23:42:24,268 root INFO copying Bio/Graphics/GenomeDiagram/_FeatureSet.py -> build/lib.linux-riscv64-cpython-314/Bio/Graphics/GenomeDiagram
2026-04-09 23:42:24,270 root INFO copying Bio/Graphics/GenomeDiagram/_Diagram.py -> build/lib.linux-riscv64-cpython-314/Bio/Graphics/GenomeDiagram
2026-04-09 23:42:24,271 root INFO copying Bio/Graphics/GenomeDiagram/_Track.py -> build/lib.linux-riscv64-cpython-314/Bio/Graphics/GenomeDiagram
2026-04-09 23:42:24,273 root INFO copying Bio/Graphics/GenomeDiagram/_CircularDrawer.py -> build/lib.linux-riscv64-cpython-314/Bio/Graphics/GenomeDiagram
2026-04-09 23:42:24,275 root INFO copying Bio/Graphics/GenomeDiagram/_LinearDrawer.py -> build/lib.linux-riscv64-cpython-314/Bio/Graphics/GenomeDiagram
2026-04-09 23:42:24,277 root INFO copying Bio/Graphics/GenomeDiagram/_GraphSet.py -> build/lib.linux-riscv64-cpython-314/Bio/Graphics/GenomeDiagram
2026-04-09 23:42:24,278 root INFO copying Bio/Graphics/GenomeDiagram/_Colors.py -> build/lib.linux-riscv64-cpython-314/Bio/Graphics/GenomeDiagram
2026-04-09 23:42:24,280 root INFO copying Bio/Graphics/GenomeDiagram/_Feature.py -> build/lib.linux-riscv64-cpython-314/Bio/Graphics/GenomeDiagram
2026-04-09 23:42:24,281 root INFO copying Bio/Graphics/GenomeDiagram/_Graph.py -> build/lib.linux-riscv64-cpython-314/Bio/Graphics/GenomeDiagram
2026-04-09 23:42:24,283 root INFO creating build/lib.linux-riscv64-cpython-314/Bio/HMM
2026-04-09 23:42:24,284 root INFO copying Bio/HMM/__init__.py -> build/lib.linux-riscv64-cpython-314/Bio/HMM
2026-04-09 23:42:24,286 root INFO creating build/lib.linux-riscv64-cpython-314/Bio/KEGG
2026-04-09 23:42:24,287 root INFO copying Bio/KEGG/__init__.py -> build/lib.linux-riscv64-cpython-314/Bio/KEGG
2026-04-09 23:42:24,288 root INFO copying Bio/KEGG/REST.py -> build/lib.linux-riscv64-cpython-314/Bio/KEGG
2026-04-09 23:42:24,290 root INFO creating build/lib.linux-riscv64-cpython-314/Bio/KEGG/Compound
2026-04-09 23:42:24,291 root INFO copying Bio/KEGG/Compound/__init__.py -> build/lib.linux-riscv64-cpython-314/Bio/KEGG/Compound
2026-04-09 23:42:24,292 root INFO creating build/lib.linux-riscv64-cpython-314/Bio/KEGG/Enzyme
2026-04-09 23:42:24,293 root INFO copying Bio/KEGG/Enzyme/__init__.py -> build/lib.linux-riscv64-cpython-314/Bio/KEGG/Enzyme
2026-04-09 23:42:24,295 root INFO creating build/lib.linux-riscv64-cpython-314/Bio/KEGG/Gene
2026-04-09 23:42:24,296 root INFO copying Bio/KEGG/Gene/__init__.py -> build/lib.linux-riscv64-cpython-314/Bio/KEGG/Gene
2026-04-09 23:42:24,298 root INFO creating build/lib.linux-riscv64-cpython-314/Bio/KEGG/Map
2026-04-09 23:42:24,298 root INFO copying Bio/KEGG/Map/__init__.py -> build/lib.linux-riscv64-cpython-314/Bio/KEGG/Map
2026-04-09 23:42:24,300 root INFO creating build/lib.linux-riscv64-cpython-314/Bio/PDB/mmtf
2026-04-09 23:42:24,301 root INFO copying Bio/PDB/mmtf/__init__.py -> build/lib.linux-riscv64-cpython-314/Bio/PDB/mmtf
2026-04-09 23:42:24,302 root INFO copying Bio/PDB/mmtf/mmtfio.py -> build/lib.linux-riscv64-cpython-314/Bio/PDB/mmtf
2026-04-09 23:42:24,304 root INFO copying Bio/PDB/mmtf/DefaultParser.py -> build/lib.linux-riscv64-cpython-314/Bio/PDB/mmtf
2026-04-09 23:42:24,306 root INFO creating build/lib.linux-riscv64-cpython-314/Bio/KEGG/KGML
2026-04-09 23:42:24,307 root INFO copying Bio/KEGG/KGML/__init__.py -> build/lib.linux-riscv64-cpython-314/Bio/KEGG/KGML
2026-04-09 23:42:24,308 root INFO copying Bio/KEGG/KGML/KGML_parser.py -> build/lib.linux-riscv64-cpython-314/Bio/KEGG/KGML
2026-04-09 23:42:24,309 root INFO copying Bio/KEGG/KGML/KGML_pathway.py -> build/lib.linux-riscv64-cpython-314/Bio/KEGG/KGML
2026-04-09 23:42:24,311 root INFO creating build/lib.linux-riscv64-cpython-314/Bio/Medline
2026-04-09 23:42:24,312 root INFO copying Bio/Medline/__init__.py -> build/lib.linux-riscv64-cpython-314/Bio/Medline
2026-04-09 23:42:24,314 root INFO creating build/lib.linux-riscv64-cpython-314/Bio/motifs
2026-04-09 23:42:24,315 root INFO copying Bio/motifs/pfm.py -> build/lib.linux-riscv64-cpython-314/Bio/motifs
2026-04-09 23:42:24,317 root INFO copying Bio/motifs/thresholds.py -> build/lib.linux-riscv64-cpython-314/Bio/motifs
2026-04-09 23:42:24,318 root INFO copying Bio/motifs/__init__.py -> build/lib.linux-riscv64-cpython-314/Bio/motifs
2026-04-09 23:42:24,319 root INFO copying Bio/motifs/minimal.py -> build/lib.linux-riscv64-cpython-314/Bio/motifs
2026-04-09 23:42:24,321 root INFO copying Bio/motifs/meme.py -> build/lib.linux-riscv64-cpython-314/Bio/motifs
2026-04-09 23:42:24,322 root INFO copying Bio/motifs/alignace.py -> build/lib.linux-riscv64-cpython-314/Bio/motifs
2026-04-09 23:42:24,324 root INFO copying Bio/motifs/matrix.py -> build/lib.linux-riscv64-cpython-314/Bio/motifs
2026-04-09 23:42:24,325 root INFO copying Bio/motifs/clusterbuster.py -> build/lib.linux-riscv64-cpython-314/Bio/motifs
2026-04-09 23:42:24,327 root INFO copying Bio/motifs/transfac.py -> build/lib.linux-riscv64-cpython-314/Bio/motifs
2026-04-09 23:42:24,328 root INFO copying Bio/motifs/mast.py -> build/lib.linux-riscv64-cpython-314/Bio/motifs
2026-04-09 23:42:24,329 root INFO copying Bio/motifs/xms.py -> build/lib.linux-riscv64-cpython-314/Bio/motifs
2026-04-09 23:42:24,331 root INFO creating build/lib.linux-riscv64-cpython-314/Bio/motifs/jaspar
2026-04-09 23:42:24,332 root INFO copying Bio/motifs/jaspar/db.py -> build/lib.linux-riscv64-cpython-314/Bio/motifs/jaspar
2026-04-09 23:42:24,334 root INFO copying Bio/motifs/jaspar/__init__.py -> build/lib.linux-riscv64-cpython-314/Bio/motifs/jaspar
2026-04-09 23:42:24,336 root INFO creating build/lib.linux-riscv64-cpython-314/Bio/Nexus
2026-04-09 23:42:24,336 root INFO copying Bio/Nexus/Nodes.py -> build/lib.linux-riscv64-cpython-314/Bio/Nexus
2026-04-09 23:42:24,338 root INFO copying Bio/Nexus/Nexus.py -> build/lib.linux-riscv64-cpython-314/Bio/Nexus
2026-04-09 23:42:24,340 root INFO copying Bio/Nexus/__init__.py -> build/lib.linux-riscv64-cpython-314/Bio/Nexus
2026-04-09 23:42:24,341 root INFO copying Bio/Nexus/StandardData.py -> build/lib.linux-riscv64-cpython-314/Bio/Nexus
2026-04-09 23:42:24,342 root INFO copying Bio/Nexus/Trees.py -> build/lib.linux-riscv64-cpython-314/Bio/Nexus
2026-04-09 23:42:24,345 root INFO creating build/lib.linux-riscv64-cpython-314/Bio/NMR
2026-04-09 23:42:24,346 root INFO copying Bio/NMR/NOEtools.py -> build/lib.linux-riscv64-cpython-314/Bio/NMR
2026-04-09 23:42:24,347 root INFO copying Bio/NMR/__init__.py -> build/lib.linux-riscv64-cpython-314/Bio/NMR
2026-04-09 23:42:24,348 root INFO copying Bio/NMR/xpktools.py -> build/lib.linux-riscv64-cpython-314/Bio/NMR
2026-04-09 23:42:24,350 root INFO creating build/lib.linux-riscv64-cpython-314/Bio/Pathway
2026-04-09 23:42:24,351 root INFO copying Bio/Pathway/__init__.py -> build/lib.linux-riscv64-cpython-314/Bio/Pathway
2026-04-09 23:42:24,353 root INFO creating build/lib.linux-riscv64-cpython-314/Bio/Pathway/Rep
2026-04-09 23:42:24,353 root INFO copying Bio/Pathway/Rep/__init__.py -> build/lib.linux-riscv64-cpython-314/Bio/Pathway/Rep
2026-04-09 23:42:24,355 root INFO copying Bio/Pathway/Rep/Graph.py -> build/lib.linux-riscv64-cpython-314/Bio/Pathway/Rep
2026-04-09 23:42:24,356 root INFO copying Bio/Pathway/Rep/MultiGraph.py -> build/lib.linux-riscv64-cpython-314/Bio/Pathway/Rep
2026-04-09 23:42:24,359 root INFO copying Bio/PDB/Structure.py -> build/lib.linux-riscv64-cpython-314/Bio/PDB
2026-04-09 23:42:24,361 root INFO copying Bio/PDB/Model.py -> build/lib.linux-riscv64-cpython-314/Bio/PDB
2026-04-09 23:42:24,362 root INFO copying Bio/PDB/Selection.py -> build/lib.linux-riscv64-cpython-314/Bio/PDB
2026-04-09 23:42:24,363 root INFO copying Bio/PDB/FragmentMapper.py -> build/lib.linux-riscv64-cpython-314/Bio/PDB
2026-04-09 23:42:24,364 root INFO copying Bio/PDB/PDBExceptions.py -> build/lib.linux-riscv64-cpython-314/Bio/PDB
2026-04-09 23:42:24,366 root INFO copying Bio/PDB/StructureAlignment.py -> build/lib.linux-riscv64-cpython-314/Bio/PDB
2026-04-09 23:42:24,367 root INFO copying Bio/PDB/DSSP.py -> build/lib.linux-riscv64-cpython-314/Bio/PDB
2026-04-09 23:42:24,369 root INFO copying Bio/PDB/ic_rebuild.py -> build/lib.linux-riscv64-cpython-314/Bio/PDB
2026-04-09 23:42:24,370 root INFO copying Bio/PDB/__init__.py -> build/lib.linux-riscv64-cpython-314/Bio/PDB
2026-04-09 23:42:24,371 root INFO copying Bio/PDB/MMCIFParser.py -> build/lib.linux-riscv64-cpython-314/Bio/PDB
2026-04-09 23:42:24,373 root INFO copying Bio/PDB/MMCIF2Dict.py -> build/lib.linux-riscv64-cpython-314/Bio/PDB
2026-04-09 23:42:24,374 root INFO copying Bio/PDB/qcprot.py -> build/lib.linux-riscv64-cpython-314/Bio/PDB
2026-04-09 23:42:24,376 root INFO copying Bio/PDB/PDBParser.py -> build/lib.linux-riscv64-cpython-314/Bio/PDB
2026-04-09 23:42:24,377 root INFO copying Bio/PDB/Entity.py -> build/lib.linux-riscv64-cpython-314/Bio/PDB
2026-04-09 23:42:24,379 root INFO copying Bio/PDB/Dice.py -> build/lib.linux-riscv64-cpython-314/Bio/PDB
2026-04-09 23:42:24,380 root INFO copying Bio/PDB/Atom.py -> build/lib.linux-riscv64-cpython-314/Bio/PDB
2026-04-09 23:42:24,381 root INFO copying Bio/PDB/mmcifio.py -> build/lib.linux-riscv64-cpython-314/Bio/PDB
2026-04-09 23:42:24,383 root INFO copying Bio/PDB/vectors.py -> build/lib.linux-riscv64-cpython-314/Bio/PDB
2026-04-09 23:42:24,384 root INFO copying Bio/PDB/PDBIO.py -> build/lib.linux-riscv64-cpython-314/Bio/PDB
2026-04-09 23:42:24,386 root INFO copying Bio/PDB/PDBList.py -> build/lib.linux-riscv64-cpython-314/Bio/PDB
2026-04-09 23:42:24,387 root INFO copying Bio/PDB/ResidueDepth.py -> build/lib.linux-riscv64-cpython-314/Bio/PDB
2026-04-09 23:42:24,389 root INFO copying Bio/PDB/binary_cif.py -> build/lib.linux-riscv64-cpython-314/Bio/PDB
2026-04-09 23:42:24,390 root INFO copying Bio/PDB/SASA.py -> build/lib.linux-riscv64-cpython-314/Bio/PDB
2026-04-09 23:42:24,392 root INFO copying Bio/PDB/HSExposure.py -> build/lib.linux-riscv64-cpython-314/Bio/PDB
2026-04-09 23:42:24,393 root INFO copying Bio/PDB/Residue.py -> build/lib.linux-riscv64-cpython-314/Bio/PDB
2026-04-09 23:42:24,395 root INFO copying Bio/PDB/PDBMLParser.py -> build/lib.linux-riscv64-cpython-314/Bio/PDB
2026-04-09 23:42:24,396 root INFO copying Bio/PDB/Superimposer.py -> build/lib.linux-riscv64-cpython-314/Bio/PDB
2026-04-09 23:42:24,397 root INFO copying Bio/PDB/NeighborSearch.py -> build/lib.linux-riscv64-cpython-314/Bio/PDB
2026-04-09 23:42:24,399 root INFO copying Bio/PDB/cealign.py -> build/lib.linux-riscv64-cpython-314/Bio/PDB
2026-04-09 23:42:24,400 root INFO copying Bio/PDB/Polypeptide.py -> build/lib.linux-riscv64-cpython-314/Bio/PDB
2026-04-09 23:42:24,402 root INFO copying Bio/PDB/ic_data.py -> build/lib.linux-riscv64-cpython-314/Bio/PDB
2026-04-09 23:42:24,404 root INFO copying Bio/PDB/parse_pdb_header.py -> build/lib.linux-riscv64-cpython-314/Bio/PDB
2026-04-09 23:42:24,405 root INFO copying Bio/PDB/SCADIO.py -> build/lib.linux-riscv64-cpython-314/Bio/PDB
2026-04-09 23:42:24,407 root INFO copying Bio/PDB/StructureBuilder.py -> build/lib.linux-riscv64-cpython-314/Bio/PDB
2026-04-09 23:42:24,408 root INFO copying Bio/PDB/AbstractPropertyMap.py -> build/lib.linux-riscv64-cpython-314/Bio/PDB
2026-04-09 23:42:24,409 root INFO copying Bio/PDB/PSEA.py -> build/lib.linux-riscv64-cpython-314/Bio/PDB
2026-04-09 23:42:24,411 root INFO copying Bio/PDB/internal_coords.py -> build/lib.linux-riscv64-cpython-314/Bio/PDB
2026-04-09 23:42:24,413 root INFO copying Bio/PDB/PICIO.py -> build/lib.linux-riscv64-cpython-314/Bio/PDB
2026-04-09 23:42:24,415 root INFO copying Bio/PDB/Chain.py -> build/lib.linux-riscv64-cpython-314/Bio/PDB
2026-04-09 23:42:24,416 root INFO copying Bio/PDB/NACCESS.py -> build/lib.linux-riscv64-cpython-314/Bio/PDB
2026-04-09 23:42:24,418 root INFO copying Bio/PDB/alphafold_db.py -> build/lib.linux-riscv64-cpython-314/Bio/PDB
2026-04-09 23:42:24,420 root INFO creating build/lib.linux-riscv64-cpython-314/Bio/phenotype
2026-04-09 23:42:24,420 root INFO copying Bio/phenotype/phen_micro.py -> build/lib.linux-riscv64-cpython-314/Bio/phenotype
2026-04-09 23:42:24,422 root INFO copying Bio/phenotype/__init__.py -> build/lib.linux-riscv64-cpython-314/Bio/phenotype
2026-04-09 23:42:24,424 root INFO copying Bio/phenotype/pm_fitting.py -> build/lib.linux-riscv64-cpython-314/Bio/phenotype
2026-04-09 23:42:24,425 root INFO creating build/lib.linux-riscv64-cpython-314/Bio/PopGen
2026-04-09 23:42:24,426 root INFO copying Bio/PopGen/__init__.py -> build/lib.linux-riscv64-cpython-314/Bio/PopGen
2026-04-09 23:42:24,428 root INFO creating build/lib.linux-riscv64-cpython-314/Bio/PopGen/GenePop
2026-04-09 23:42:24,429 root INFO copying Bio/PopGen/GenePop/__init__.py -> build/lib.linux-riscv64-cpython-314/Bio/PopGen/GenePop
2026-04-09 23:42:24,430 root INFO copying Bio/PopGen/GenePop/FileParser.py -> build/lib.linux-riscv64-cpython-314/Bio/PopGen/GenePop
2026-04-09 23:42:24,432 root INFO copying Bio/PopGen/GenePop/LargeFileParser.py -> build/lib.linux-riscv64-cpython-314/Bio/PopGen/GenePop
2026-04-09 23:42:24,433 root INFO creating build/lib.linux-riscv64-cpython-314/Bio/Restriction
2026-04-09 23:42:24,434 root INFO copying Bio/Restriction/__init__.py -> build/lib.linux-riscv64-cpython-314/Bio/Restriction
2026-04-09 23:42:24,436 root INFO copying Bio/Restriction/PrintFormat.py -> build/lib.linux-riscv64-cpython-314/Bio/Restriction
2026-04-09 23:42:24,437 root INFO copying Bio/Restriction/Restriction_Dictionary.py -> build/lib.linux-riscv64-cpython-314/Bio/Restriction
2026-04-09 23:42:24,442 root INFO copying Bio/Restriction/Restriction.py -> build/lib.linux-riscv64-cpython-314/Bio/Restriction
2026-04-09 23:42:24,445 root INFO creating build/lib.linux-riscv64-cpython-314/Bio/SCOP
2026-04-09 23:42:24,446 root INFO copying Bio/SCOP/Raf.py -> build/lib.linux-riscv64-cpython-314/Bio/SCOP
2026-04-09 23:42:24,447 root INFO copying Bio/SCOP/Residues.py -> build/lib.linux-riscv64-cpython-314/Bio/SCOP
2026-04-09 23:42:24,449 root INFO copying Bio/SCOP/Cla.py -> build/lib.linux-riscv64-cpython-314/Bio/SCOP
2026-04-09 23:42:24,450 root INFO copying Bio/SCOP/__init__.py -> build/lib.linux-riscv64-cpython-314/Bio/SCOP
2026-04-09 23:42:24,452 root INFO copying Bio/SCOP/Dom.py -> build/lib.linux-riscv64-cpython-314/Bio/SCOP
2026-04-09 23:42:24,453 root INFO copying Bio/SCOP/Hie.py -> build/lib.linux-riscv64-cpython-314/Bio/SCOP
2026-04-09 23:42:24,455 root INFO copying Bio/SCOP/Des.py -> build/lib.linux-riscv64-cpython-314/Bio/SCOP
2026-04-09 23:42:24,457 root INFO creating build/lib.linux-riscv64-cpython-314/Bio/SearchIO
2026-04-09 23:42:24,458 root INFO copying Bio/SearchIO/__init__.py -> build/lib.linux-riscv64-cpython-314/Bio/SearchIO
2026-04-09 23:42:24,459 root INFO copying Bio/SearchIO/BlatIO.py -> build/lib.linux-riscv64-cpython-314/Bio/SearchIO
2026-04-09 23:42:24,461 root INFO copying Bio/SearchIO/_index.py -> build/lib.linux-riscv64-cpython-314/Bio/SearchIO
2026-04-09 23:42:24,462 root INFO copying Bio/SearchIO/FastaIO.py -> build/lib.linux-riscv64-cpython-314/Bio/SearchIO
2026-04-09 23:42:24,464 root INFO copying Bio/SearchIO/_utils.py -> build/lib.linux-riscv64-cpython-314/Bio/SearchIO
2026-04-09 23:42:24,466 root INFO creating build/lib.linux-riscv64-cpython-314/Bio/SearchIO/_model
2026-04-09 23:42:24,467 root INFO copying Bio/SearchIO/_model/__init__.py -> build/lib.linux-riscv64-cpython-314/Bio/SearchIO/_model
2026-04-09 23:42:24,468 root INFO copying Bio/SearchIO/_model/_base.py -> build/lib.linux-riscv64-cpython-314/Bio/SearchIO/_model
2026-04-09 23:42:24,469 root INFO copying Bio/SearchIO/_model/query.py -> build/lib.linux-riscv64-cpython-314/Bio/SearchIO/_model
2026-04-09 23:42:24,471 root INFO copying Bio/SearchIO/_model/hsp.py -> build/lib.linux-riscv64-cpython-314/Bio/SearchIO/_model
2026-04-09 23:42:24,473 root INFO copying Bio/SearchIO/_model/hit.py -> build/lib.linux-riscv64-cpython-314/Bio/SearchIO/_model
2026-04-09 23:42:24,475 root INFO creating build/lib.linux-riscv64-cpython-314/Bio/SearchIO/BlastIO
2026-04-09 23:42:24,476 root INFO copying Bio/SearchIO/BlastIO/blast_tab.py -> build/lib.linux-riscv64-cpython-314/Bio/SearchIO/BlastIO
2026-04-09 23:42:24,477 root INFO copying Bio/SearchIO/BlastIO/__init__.py -> build/lib.linux-riscv64-cpython-314/Bio/SearchIO/BlastIO
2026-04-09 23:42:24,479 root INFO copying Bio/SearchIO/BlastIO/blast_xml.py -> build/lib.linux-riscv64-cpython-314/Bio/SearchIO/BlastIO
2026-04-09 23:42:24,481 root INFO creating build/lib.linux-riscv64-cpython-314/Bio/SearchIO/HHsuiteIO
2026-04-09 23:42:24,482 root INFO copying Bio/SearchIO/HHsuiteIO/hhsuite2_text.py -> build/lib.linux-riscv64-cpython-314/Bio/SearchIO/HHsuiteIO
2026-04-09 23:42:24,483 root INFO copying Bio/SearchIO/HHsuiteIO/__init__.py -> build/lib.linux-riscv64-cpython-314/Bio/SearchIO/HHsuiteIO
2026-04-09 23:42:24,485 root INFO creating build/lib.linux-riscv64-cpython-314/Bio/SearchIO/HmmerIO
2026-04-09 23:42:24,486 root INFO copying Bio/SearchIO/HmmerIO/hmmer3_domtab.py -> build/lib.linux-riscv64-cpython-314/Bio/SearchIO/HmmerIO
2026-04-09 23:42:24,487 root INFO copying Bio/SearchIO/HmmerIO/__init__.py -> build/lib.linux-riscv64-cpython-314/Bio/SearchIO/HmmerIO
2026-04-09 23:42:24,489 root INFO copying Bio/SearchIO/HmmerIO/hmmer2_text.py -> build/lib.linux-riscv64-cpython-314/Bio/SearchIO/HmmerIO
2026-04-09 23:42:24,490 root INFO copying Bio/SearchIO/HmmerIO/hmmer3_text.py -> build/lib.linux-riscv64-cpython-314/Bio/SearchIO/HmmerIO
2026-04-09 23:42:24,492 root INFO copying Bio/SearchIO/HmmerIO/hmmer3_tab.py -> build/lib.linux-riscv64-cpython-314/Bio/SearchIO/HmmerIO
2026-04-09 23:42:24,493 root INFO copying Bio/SearchIO/HmmerIO/_base.py -> build/lib.linux-riscv64-cpython-314/Bio/SearchIO/HmmerIO
2026-04-09 23:42:24,495 root INFO creating build/lib.linux-riscv64-cpython-314/Bio/SearchIO/InfernalIO
2026-04-09 23:42:24,496 root INFO copying Bio/SearchIO/InfernalIO/__init__.py -> build/lib.linux-riscv64-cpython-314/Bio/SearchIO/InfernalIO
2026-04-09 23:42:24,497 root INFO copying Bio/SearchIO/InfernalIO/infernal_text.py -> build/lib.linux-riscv64-cpython-314/Bio/SearchIO/InfernalIO
2026-04-09 23:42:24,499 root INFO copying Bio/SearchIO/InfernalIO/infernal_tab.py -> build/lib.linux-riscv64-cpython-314/Bio/SearchIO/InfernalIO
2026-04-09 23:42:24,500 root INFO copying Bio/SearchIO/InfernalIO/_base.py -> build/lib.linux-riscv64-cpython-314/Bio/SearchIO/InfernalIO
2026-04-09 23:42:24,502 root INFO creating build/lib.linux-riscv64-cpython-314/Bio/SearchIO/ExonerateIO
2026-04-09 23:42:24,503 root INFO copying Bio/SearchIO/ExonerateIO/exonerate_vulgar.py -> build/lib.linux-riscv64-cpython-314/Bio/SearchIO/ExonerateIO
2026-04-09 23:42:24,504 root INFO copying Bio/SearchIO/ExonerateIO/__init__.py -> build/lib.linux-riscv64-cpython-314/Bio/SearchIO/ExonerateIO
2026-04-09 23:42:24,506 root INFO copying Bio/SearchIO/ExonerateIO/exonerate_text.py -> build/lib.linux-riscv64-cpython-314/Bio/SearchIO/ExonerateIO
2026-04-09 23:42:24,507 root INFO copying Bio/SearchIO/ExonerateIO/_base.py -> build/lib.linux-riscv64-cpython-314/Bio/SearchIO/ExonerateIO
2026-04-09 23:42:24,509 root INFO copying Bio/SearchIO/ExonerateIO/exonerate_cigar.py -> build/lib.linux-riscv64-cpython-314/Bio/SearchIO/ExonerateIO
2026-04-09 23:42:24,511 root INFO creating build/lib.linux-riscv64-cpython-314/Bio/SearchIO/InterproscanIO
2026-04-09 23:42:24,512 root INFO copying Bio/SearchIO/InterproscanIO/__init__.py -> build/lib.linux-riscv64-cpython-314/Bio/SearchIO/InterproscanIO
2026-04-09 23:42:24,513 root INFO copying Bio/SearchIO/InterproscanIO/interproscan_xml.py -> build/lib.linux-riscv64-cpython-314/Bio/SearchIO/InterproscanIO
2026-04-09 23:42:24,515 root INFO creating build/lib.linux-riscv64-cpython-314/Bio/SeqIO
2026-04-09 23:42:24,516 root INFO copying Bio/SeqIO/PdbIO.py -> build/lib.linux-riscv64-cpython-314/Bio/SeqIO
2026-04-09 23:42:24,518 root INFO copying Bio/SeqIO/Interfaces.py -> build/lib.linux-riscv64-cpython-314/Bio/SeqIO
2026-04-09 23:42:24,519 root INFO copying Bio/SeqIO/TwoBitIO.py -> build/lib.linux-riscv64-cpython-314/Bio/SeqIO
2026-04-09 23:42:24,520 root INFO copying Bio/SeqIO/__init__.py -> build/lib.linux-riscv64-cpython-314/Bio/SeqIO
2026-04-09 23:42:24,523 root INFO copying Bio/SeqIO/SffIO.py -> build/lib.linux-riscv64-cpython-314/Bio/SeqIO
2026-04-09 23:42:24,525 root INFO copying Bio/SeqIO/PirIO.py -> build/lib.linux-riscv64-cpython-314/Bio/SeqIO
2026-04-09 23:42:24,526 root INFO copying Bio/SeqIO/IgIO.py -> build/lib.linux-riscv64-cpython-314/Bio/SeqIO
2026-04-09 23:42:24,527 root INFO copying Bio/SeqIO/QualityIO.py -> build/lib.linux-riscv64-cpython-314/Bio/SeqIO
2026-04-09 23:42:24,529 root INFO copying Bio/SeqIO/SeqXmlIO.py -> build/lib.linux-riscv64-cpython-314/Bio/SeqIO
2026-04-09 23:42:24,531 root INFO copying Bio/SeqIO/AbiIO.py -> build/lib.linux-riscv64-cpython-314/Bio/SeqIO
2026-04-09 23:42:24,532 root INFO copying Bio/SeqIO/GckIO.py -> build/lib.linux-riscv64-cpython-314/Bio/SeqIO
2026-04-09 23:42:24,534 root INFO copying Bio/SeqIO/AceIO.py -> build/lib.linux-riscv64-cpython-314/Bio/SeqIO
2026-04-09 23:42:24,535 root INFO copying Bio/SeqIO/InsdcIO.py -> build/lib.linux-riscv64-cpython-314/Bio/SeqIO
2026-04-09 23:42:24,537 root INFO copying Bio/SeqIO/_index.py -> build/lib.linux-riscv64-cpython-314/Bio/SeqIO
2026-04-09 23:42:24,539 root INFO copying Bio/SeqIO/TabIO.py -> build/lib.linux-riscv64-cpython-314/Bio/SeqIO
2026-04-09 23:42:24,540 root INFO copying Bio/SeqIO/GfaIO.py -> build/lib.linux-riscv64-cpython-314/Bio/SeqIO
2026-04-09 23:42:24,541 root INFO copying Bio/SeqIO/FastaIO.py -> build/lib.linux-riscv64-cpython-314/Bio/SeqIO
2026-04-09 23:42:24,543 root INFO copying Bio/SeqIO/SnapGeneIO.py -> build/lib.linux-riscv64-cpython-314/Bio/SeqIO
2026-04-09 23:42:24,544 root INFO copying Bio/SeqIO/NibIO.py -> build/lib.linux-riscv64-cpython-314/Bio/SeqIO
2026-04-09 23:42:24,546 root INFO copying Bio/SeqIO/SwissIO.py -> build/lib.linux-riscv64-cpython-314/Bio/SeqIO
2026-04-09 23:42:24,547 root INFO copying Bio/SeqIO/PhdIO.py -> build/lib.linux-riscv64-cpython-314/Bio/SeqIO
2026-04-09 23:42:24,548 root INFO copying Bio/SeqIO/XdnaIO.py -> build/lib.linux-riscv64-cpython-314/Bio/SeqIO
2026-04-09 23:42:24,550 root INFO copying Bio/SeqIO/UniprotIO.py -> build/lib.linux-riscv64-cpython-314/Bio/SeqIO
2026-04-09 23:42:24,552 root INFO creating build/lib.linux-riscv64-cpython-314/Bio/SeqUtils
2026-04-09 23:42:24,553 root INFO copying Bio/SeqUtils/__init__.py -> build/lib.linux-riscv64-cpython-314/Bio/SeqUtils
2026-04-09 23:42:24,554 root INFO copying Bio/SeqUtils/CheckSum.py -> build/lib.linux-riscv64-cpython-314/Bio/SeqUtils
2026-04-09 23:42:24,556 root INFO copying Bio/SeqUtils/lcc.py -> build/lib.linux-riscv64-cpython-314/Bio/SeqUtils
2026-04-09 23:42:24,557 root INFO copying Bio/SeqUtils/MeltingTemp.py -> build/lib.linux-riscv64-cpython-314/Bio/SeqUtils
2026-04-09 23:42:24,559 root INFO copying Bio/SeqUtils/ProtParamData.py -> build/lib.linux-riscv64-cpython-314/Bio/SeqUtils
2026-04-09 23:42:24,560 root INFO copying Bio/SeqUtils/IsoelectricPoint.py -> build/lib.linux-riscv64-cpython-314/Bio/SeqUtils
2026-04-09 23:42:24,562 root INFO copying Bio/SeqUtils/ProtParam.py -> build/lib.linux-riscv64-cpython-314/Bio/SeqUtils
2026-04-09 23:42:24,564 root INFO creating build/lib.linux-riscv64-cpython-314/Bio/Sequencing
2026-04-09 23:42:24,564 root INFO copying Bio/Sequencing/__init__.py -> build/lib.linux-riscv64-cpython-314/Bio/Sequencing
2026-04-09 23:42:24,566 root INFO copying Bio/Sequencing/Ace.py -> build/lib.linux-riscv64-cpython-314/Bio/Sequencing
2026-04-09 23:42:24,567 root INFO copying Bio/Sequencing/Phd.py -> build/lib.linux-riscv64-cpython-314/Bio/Sequencing
2026-04-09 23:42:24,569 root INFO creating build/lib.linux-riscv64-cpython-314/Bio/SVDSuperimposer
2026-04-09 23:42:24,570 root INFO copying Bio/SVDSuperimposer/__init__.py -> build/lib.linux-riscv64-cpython-314/Bio/SVDSuperimposer
2026-04-09 23:42:24,572 root INFO creating build/lib.linux-riscv64-cpython-314/Bio/SwissProt
2026-04-09 23:42:24,573 root INFO copying Bio/SwissProt/__init__.py -> build/lib.linux-riscv64-cpython-314/Bio/SwissProt
2026-04-09 23:42:24,574 root INFO copying Bio/SwissProt/KeyWList.py -> build/lib.linux-riscv64-cpython-314/Bio/SwissProt
2026-04-09 23:42:24,576 root INFO creating build/lib.linux-riscv64-cpython-314/Bio/TogoWS
2026-04-09 23:42:24,577 root INFO copying Bio/TogoWS/__init__.py -> build/lib.linux-riscv64-cpython-314/Bio/TogoWS
2026-04-09 23:42:24,579 root INFO creating build/lib.linux-riscv64-cpython-314/Bio/Phylo
2026-04-09 23:42:24,580 root INFO copying Bio/Phylo/NeXMLIO.py -> build/lib.linux-riscv64-cpython-314/Bio/Phylo
2026-04-09 23:42:24,581 root INFO copying Bio/Phylo/CDAOIO.py -> build/lib.linux-riscv64-cpython-314/Bio/Phylo
2026-04-09 23:42:24,583 root INFO copying Bio/Phylo/_cdao_owl.py -> build/lib.linux-riscv64-cpython-314/Bio/Phylo
2026-04-09 23:42:24,585 root INFO copying Bio/Phylo/CDAO.py -> build/lib.linux-riscv64-cpython-314/Bio/Phylo
2026-04-09 23:42:24,586 root INFO copying Bio/Phylo/__init__.py -> build/lib.linux-riscv64-cpython-314/Bio/Phylo
2026-04-09 23:42:24,588 root INFO copying Bio/Phylo/TreeConstruction.py -> build/lib.linux-riscv64-cpython-314/Bio/Phylo
2026-04-09 23:42:24,589 root INFO copying Bio/Phylo/Newick.py -> build/lib.linux-riscv64-cpython-314/Bio/Phylo
2026-04-09 23:42:24,591 root INFO copying Bio/Phylo/PhyloXML.py -> build/lib.linux-riscv64-cpython-314/Bio/Phylo
2026-04-09 23:42:24,592 root INFO copying Bio/Phylo/NexusIO.py -> build/lib.linux-riscv64-cpython-314/Bio/Phylo
2026-04-09 23:42:24,594 root INFO copying Bio/Phylo/Consensus.py -> build/lib.linux-riscv64-cpython-314/Bio/Phylo
2026-04-09 23:42:24,595 root INFO copying Bio/Phylo/_io.py -> build/lib.linux-riscv64-cpython-314/Bio/Phylo
2026-04-09 23:42:24,596 root INFO copying Bio/Phylo/BaseTree.py -> build/lib.linux-riscv64-cpython-314/Bio/Phylo
2026-04-09 23:42:24,598 root INFO copying Bio/Phylo/_utils.py -> build/lib.linux-riscv64-cpython-314/Bio/Phylo
2026-04-09 23:42:24,600 root INFO copying Bio/Phylo/PhyloXMLIO.py -> build/lib.linux-riscv64-cpython-314/Bio/Phylo
2026-04-09 23:42:24,601 root INFO copying Bio/Phylo/NewickIO.py -> build/lib.linux-riscv64-cpython-314/Bio/Phylo
2026-04-09 23:42:24,603 root INFO copying Bio/Phylo/NeXML.py -> build/lib.linux-riscv64-cpython-314/Bio/Phylo
2026-04-09 23:42:24,605 root INFO creating build/lib.linux-riscv64-cpython-314/Bio/Phylo/PAML
2026-04-09 23:42:24,606 root INFO copying Bio/Phylo/PAML/_paml.py -> build/lib.linux-riscv64-cpython-314/Bio/Phylo/PAML
2026-04-09 23:42:24,607 root INFO copying Bio/Phylo/PAML/__init__.py -> build/lib.linux-riscv64-cpython-314/Bio/Phylo/PAML
2026-04-09 23:42:24,608 root INFO copying Bio/Phylo/PAML/chi2.py -> build/lib.linux-riscv64-cpython-314/Bio/Phylo/PAML
2026-04-09 23:42:24,609 root INFO copying Bio/Phylo/PAML/codeml.py -> build/lib.linux-riscv64-cpython-314/Bio/Phylo/PAML
2026-04-09 23:42:24,611 root INFO copying Bio/Phylo/PAML/_parse_baseml.py -> build/lib.linux-riscv64-cpython-314/Bio/Phylo/PAML
2026-04-09 23:42:24,612 root INFO copying Bio/Phylo/PAML/_parse_codeml.py -> build/lib.linux-riscv64-cpython-314/Bio/Phylo/PAML
2026-04-09 23:42:24,614 root INFO copying Bio/Phylo/PAML/baseml.py -> build/lib.linux-riscv64-cpython-314/Bio/Phylo/PAML
2026-04-09 23:42:24,615 root INFO copying Bio/Phylo/PAML/yn00.py -> build/lib.linux-riscv64-cpython-314/Bio/Phylo/PAML
2026-04-09 23:42:24,617 root INFO copying Bio/Phylo/PAML/_parse_yn00.py -> build/lib.linux-riscv64-cpython-314/Bio/Phylo/PAML
2026-04-09 23:42:24,619 root INFO creating build/lib.linux-riscv64-cpython-314/Bio/UniGene
2026-04-09 23:42:24,620 root INFO copying Bio/UniGene/__init__.py -> build/lib.linux-riscv64-cpython-314/Bio/UniGene
2026-04-09 23:42:24,621 root INFO creating build/lib.linux-riscv64-cpython-314/Bio/UniProt
2026-04-09 23:42:24,622 root INFO copying Bio/UniProt/GOA.py -> build/lib.linux-riscv64-cpython-314/Bio/UniProt
2026-04-09 23:42:24,624 root INFO copying Bio/UniProt/__init__.py -> build/lib.linux-riscv64-cpython-314/Bio/UniProt
2026-04-09 23:42:24,626 root INFO creating build/lib.linux-riscv64-cpython-314/BioSQL
2026-04-09 23:42:24,626 root INFO copying BioSQL/BioSeq.py -> build/lib.linux-riscv64-cpython-314/BioSQL
2026-04-09 23:42:24,628 root INFO copying BioSQL/DBUtils.py -> build/lib.linux-riscv64-cpython-314/BioSQL
2026-04-09 23:42:24,629 root INFO copying BioSQL/__init__.py -> build/lib.linux-riscv64-cpython-314/BioSQL
2026-04-09 23:42:24,631 root INFO copying BioSQL/BioSeqDatabase.py -> build/lib.linux-riscv64-cpython-314/BioSQL
2026-04-09 23:42:24,632 root INFO copying BioSQL/Loader.py -> build/lib.linux-riscv64-cpython-314/BioSQL
2026-04-09 23:42:24,634 root INFO running egg_info
2026-04-09 23:42:24,646 root INFO writing biopython.egg-info/PKG-INFO
2026-04-09 23:42:24,649 root INFO writing dependency_links to biopython.egg-info/dependency_links.txt
2026-04-09 23:42:24,650 root INFO writing requirements to biopython.egg-info/requires.txt
2026-04-09 23:42:24,651 root INFO writing top-level names to biopython.egg-info/top_level.txt
2026-04-09 23:42:24,725 root INFO reading manifest file 'biopython.egg-info/SOURCES.txt'
2026-04-09 23:42:24,898 root INFO reading manifest template 'MANIFEST.in'
2026-04-09 23:42:25,227 root WARNING warning: no previously-included files found matching 'Doc/_build'
2026-04-09 23:42:25,244 root WARNING warning: no previously-included files found matching 'Tests/Gck/DGVC_GCK.zip'
2026-04-09 23:42:25,254 root WARNING warning: no previously-included files matching '*.pyc' found anywhere in distribution
2026-04-09 23:42:25,264 root WARNING warning: no previously-included files matching '*.pyo' found anywhere in distribution
2026-04-09 23:42:25,273 root WARNING warning: no previously-included files matching '*.py{}' found anywhere in distribution
2026-04-09 23:42:25,283 root WARNING warning: no previously-included files matching '*.py-e' found anywhere in distribution
2026-04-09 23:42:25,306 root WARNING warning: no previously-included files found matching 'Bio/Align/substitution_matrices/data/README.txt'
2026-04-09 23:42:25,306 root INFO adding license file 'LICENSE'
2026-04-09 23:42:25,306 root INFO adding license file 'LICENSE.rst'
2026-04-09 23:42:25,434 root INFO writing manifest file 'biopython.egg-info/SOURCES.txt'
/usr/lib/python3.14/site-packages/setuptools/command/build_py.py:215: _Warning: Package 'Bio.Align.substitution_matrices' is absent from the `packages` configuration.
!!

        ********************************************************************************
        ############################
        # Package would be ignored #
        ############################
        Python recognizes 'Bio.Align.substitution_matrices' as an importable package[^1],
        but it is absent from setuptools' `packages` configuration.

        This leads to an ambiguous overall configuration. If you want to distribute this
        package, please make sure that 'Bio.Align.substitution_matrices' is explicitly added
        to the `packages` configuration field.

        Alternatively, you can also rely on setuptools' discovery methods
        (for example by using `find_namespace_packages(...)`/`find_namespace:`
        instead of `find_packages(...)`/`find:`).

        You can read more about "package discovery" on setuptools documentation page:

        - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

        If you don't want 'Bio.Align.substitution_matrices' to be distributed and are
        already explicitly excluding 'Bio.Align.substitution_matrices' via
        `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
        you can try to use `exclude_package_data`, or `include-package-data=False` in
        combination with a more fine grained `package-data` configuration.

        You can read more about "package data files" on setuptools documentation page:

        - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


        [^1]: For Python, any directory (with suitable naming) can be imported,
              even if it does not contain any `.py` files.
              On the other hand, currently there is no concept of package data
              directory, all directories are treated like packages.
        ********************************************************************************

!!
  check.warn(importable)
2026-04-09 23:42:25,523 root INFO copying Bio/cpairwise2module.c -> build/lib.linux-riscv64-cpython-314/Bio
2026-04-09 23:42:25,525 root INFO copying Bio/py.typed -> build/lib.linux-riscv64-cpython-314/Bio
2026-04-09 23:42:25,526 root INFO copying Bio/Align/_aligncore.c -> build/lib.linux-riscv64-cpython-314/Bio/Align
2026-04-09 23:42:25,528 root INFO copying Bio/Align/_alignmentcounts.c -> build/lib.linux-riscv64-cpython-314/Bio/Align
2026-04-09 23:42:25,529 root INFO copying Bio/Align/_codonaligner.c -> build/lib.linux-riscv64-cpython-314/Bio/Align
2026-04-09 23:42:25,531 root INFO copying Bio/Align/_pairwisealigner.c -> build/lib.linux-riscv64-cpython-314/Bio/Align
2026-04-09 23:42:25,534 root INFO copying Bio/Align/_pairwisealigner.h -> build/lib.linux-riscv64-cpython-314/Bio/Align
2026-04-09 23:42:25,536 root INFO copying Bio/Align/substitution_matrices/_arraycore.c -> build/lib.linux-riscv64-cpython-314/Bio/Align/substitution_matrices
2026-04-09 23:42:25,538 root INFO copying Bio/Align/substitution_matrices/_arraycore.h -> build/lib.linux-riscv64-cpython-314/Bio/Align/substitution_matrices
2026-04-09 23:42:25,539 root INFO creating build/lib.linux-riscv64-cpython-314/Bio/Align/substitution_matrices/data
2026-04-09 23:42:25,540 root INFO copying Bio/Align/substitution_matrices/data/BENNER22 -> build/lib.linux-riscv64-cpython-314/Bio/Align/substitution_matrices/data
2026-04-09 23:42:25,541 root INFO copying Bio/Align/substitution_matrices/data/BENNER6 -> build/lib.linux-riscv64-cpython-314/Bio/Align/substitution_matrices/data
2026-04-09 23:42:25,543 root INFO copying Bio/Align/substitution_matrices/data/BENNER74 -> build/lib.linux-riscv64-cpython-314/Bio/Align/substitution_matrices/data
2026-04-09 23:42:25,544 root INFO copying Bio/Align/substitution_matrices/data/BLASTN -> build/lib.linux-riscv64-cpython-314/Bio/Align/substitution_matrices/data
2026-04-09 23:42:25,545 root INFO copying Bio/Align/substitution_matrices/data/BLASTP -> build/lib.linux-riscv64-cpython-314/Bio/Align/substitution_matrices/data
2026-04-09 23:42:25,547 root INFO copying Bio/Align/substitution_matrices/data/BLOSUM45 -> build/lib.linux-riscv64-cpython-314/Bio/Align/substitution_matrices/data
2026-04-09 23:42:25,548 root INFO copying Bio/Align/substitution_matrices/data/BLOSUM50 -> build/lib.linux-riscv64-cpython-314/Bio/Align/substitution_matrices/data
2026-04-09 23:42:25,550 root INFO copying Bio/Align/substitution_matrices/data/BLOSUM62 -> build/lib.linux-riscv64-cpython-314/Bio/Align/substitution_matrices/data
2026-04-09 23:42:25,551 root INFO copying Bio/Align/substitution_matrices/data/BLOSUM80 -> build/lib.linux-riscv64-cpython-314/Bio/Align/substitution_matrices/data
2026-04-09 23:42:25,552 root INFO copying Bio/Align/substitution_matrices/data/BLOSUM90 -> build/lib.linux-riscv64-cpython-314/Bio/Align/substitution_matrices/data
2026-04-09 23:42:25,554 root INFO copying Bio/Align/substitution_matrices/data/DAYHOFF -> build/lib.linux-riscv64-cpython-314/Bio/Align/substitution_matrices/data
2026-04-09 23:42:25,555 root INFO copying Bio/Align/substitution_matrices/data/FENG -> build/lib.linux-riscv64-cpython-314/Bio/Align/substitution_matrices/data
2026-04-09 23:42:25,557 root INFO copying Bio/Align/substitution_matrices/data/GENETIC -> build/lib.linux-riscv64-cpython-314/Bio/Align/substitution_matrices/data
2026-04-09 23:42:25,558 root INFO copying Bio/Align/substitution_matrices/data/GONNET1992 -> build/lib.linux-riscv64-cpython-314/Bio/Align/substitution_matrices/data
2026-04-09 23:42:25,559 root INFO copying Bio/Align/substitution_matrices/data/HOXD70 -> build/lib.linux-riscv64-cpython-314/Bio/Align/substitution_matrices/data
2026-04-09 23:42:25,561 root INFO copying Bio/Align/substitution_matrices/data/JOHNSON -> build/lib.linux-riscv64-cpython-314/Bio/Align/substitution_matrices/data
2026-04-09 23:42:25,562 root INFO copying Bio/Align/substitution_matrices/data/JONES -> build/lib.linux-riscv64-cpython-314/Bio/Align/substitution_matrices/data
2026-04-09 23:42:25,564 root INFO copying Bio/Align/substitution_matrices/data/LEVIN -> build/lib.linux-riscv64-cpython-314/Bio/Align/substitution_matrices/data
2026-04-09 23:42:25,565 root INFO copying Bio/Align/substitution_matrices/data/MCLACHLAN -> build/lib.linux-riscv64-cpython-314/Bio/Align/substitution_matrices/data
2026-04-09 23:42:25,566 root INFO copying Bio/Align/substitution_matrices/data/MDM78 -> build/lib.linux-riscv64-cpython-314/Bio/Align/substitution_matrices/data
2026-04-09 23:42:25,568 root INFO copying Bio/Align/substitution_matrices/data/MEGABLAST -> build/lib.linux-riscv64-cpython-314/Bio/Align/substitution_matrices/data
2026-04-09 23:42:25,569 root INFO copying Bio/Align/substitution_matrices/data/NUC.4.4 -> build/lib.linux-riscv64-cpython-314/Bio/Align/substitution_matrices/data
2026-04-09 23:42:25,571 root INFO copying Bio/Align/substitution_matrices/data/PAM250 -> build/lib.linux-riscv64-cpython-314/Bio/Align/substitution_matrices/data
2026-04-09 23:42:25,572 root INFO copying Bio/Align/substitution_matrices/data/PAM30 -> build/lib.linux-riscv64-cpython-314/Bio/Align/substitution_matrices/data
2026-04-09 23:42:25,573 root INFO copying Bio/Align/substitution_matrices/data/PAM70 -> build/lib.linux-riscv64-cpython-314/Bio/Align/substitution_matrices/data
2026-04-09 23:42:25,575 root INFO copying Bio/Align/substitution_matrices/data/RAO -> build/lib.linux-riscv64-cpython-314/Bio/Align/substitution_matrices/data
2026-04-09 23:42:25,576 root INFO copying Bio/Align/substitution_matrices/data/RISLER -> build/lib.linux-riscv64-cpython-314/Bio/Align/substitution_matrices/data
2026-04-09 23:42:25,578 root INFO copying Bio/Align/substitution_matrices/data/SCHNEIDER -> build/lib.linux-riscv64-cpython-314/Bio/Align/substitution_matrices/data
2026-04-09 23:42:25,579 root INFO copying Bio/Align/substitution_matrices/data/STR -> build/lib.linux-riscv64-cpython-314/Bio/Align/substitution_matrices/data
2026-04-09 23:42:25,581 root INFO copying Bio/Align/substitution_matrices/data/TRANS -> build/lib.linux-riscv64-cpython-314/Bio/Align/substitution_matrices/data
2026-04-09 23:42:25,582 root INFO copying Bio/Cluster/cluster.c -> build/lib.linux-riscv64-cpython-314/Bio/Cluster
2026-04-09 23:42:25,585 root INFO copying Bio/Cluster/cluster.h -> build/lib.linux-riscv64-cpython-314/Bio/Cluster
2026-04-09 23:42:25,586 root INFO copying Bio/Cluster/clustermodule.c -> build/lib.linux-riscv64-cpython-314/Bio/Cluster
2026-04-09 23:42:25,588 root INFO creating build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,589 root INFO copying Bio/Entrez/DTDs/BITS-embedded-index2.ent -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,591 root INFO copying Bio/Entrez/DTDs/BITS-question-answer2.ent -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,592 root INFO copying Bio/Entrez/DTDs/Docsum_3_0.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,594 root INFO copying Bio/Entrez/DTDs/Docsum_3_0.mod.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,595 root INFO copying Bio/Entrez/DTDs/Docsum_3_1.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,597 root INFO copying Bio/Entrez/DTDs/Docsum_3_1.mod.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,598 root INFO copying Bio/Entrez/DTDs/Docsum_3_2.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,600 root INFO copying Bio/Entrez/DTDs/Docsum_3_2.mod.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,602 root INFO copying Bio/Entrez/DTDs/Docsum_3_3.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,603 root INFO copying Bio/Entrez/DTDs/Docsum_3_3.mod.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,605 root INFO copying Bio/Entrez/DTDs/Docsum_3_4.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,606 root INFO copying Bio/Entrez/DTDs/Docsum_3_4.mod.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,608 root INFO copying Bio/Entrez/DTDs/EMBL_General.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,609 root INFO copying Bio/Entrez/DTDs/EMBL_General.mod.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,610 root INFO copying Bio/Entrez/DTDs/GenBank_General.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,612 root INFO copying Bio/Entrez/DTDs/GenBank_General.mod.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,613 root INFO copying Bio/Entrez/DTDs/HomoloGene.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,615 root INFO copying Bio/Entrez/DTDs/HomoloGene.mod.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,616 root INFO copying Bio/Entrez/DTDs/INSD_INSDSeq.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,617 root INFO copying Bio/Entrez/DTDs/INSD_INSDSeq.mod.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,619 root INFO copying Bio/Entrez/DTDs/JATS-XHTMLtablesetup1-3.ent -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,620 root INFO copying Bio/Entrez/DTDs/JATS-ali-namespace1-3.ent -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,622 root INFO copying Bio/Entrez/DTDs/JATS-archivearticle1-3-mathml3.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,624 root INFO copying Bio/Entrez/DTDs/JATS-archivecustom-classes1-3.ent -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,625 root INFO copying Bio/Entrez/DTDs/JATS-archivecustom-mixes1-3.ent -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,627 root INFO copying Bio/Entrez/DTDs/JATS-archivecustom-models1-3.ent -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,629 root INFO copying Bio/Entrez/DTDs/JATS-archivecustom-modules1-3.ent -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,631 root INFO copying Bio/Entrez/DTDs/JATS-articlemeta1-3.ent -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,633 root INFO copying Bio/Entrez/DTDs/JATS-backmatter1-3.ent -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,635 root INFO copying Bio/Entrez/DTDs/JATS-chars1-3.ent -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,637 root INFO copying Bio/Entrez/DTDs/JATS-common-atts1-3.ent -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,638 root INFO copying Bio/Entrez/DTDs/JATS-common1-3.ent -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,641 root INFO copying Bio/Entrez/DTDs/JATS-default-classes1-3.ent -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,643 root INFO copying Bio/Entrez/DTDs/JATS-default-mixes1-3.ent -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
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2026-04-09 23:42:25,852 root INFO copying Bio/Entrez/DTDs/archivecustom-modules.ent -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
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2026-04-09 23:42:25,856 root INFO copying Bio/Entrez/DTDs/backmatter.ent -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,857 root INFO copying Bio/Entrez/DTDs/bookdoc_100301.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
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2026-04-09 23:42:25,864 root INFO copying Bio/Entrez/DTDs/bookdoc_150101.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,866 root INFO copying Bio/Entrez/DTDs/chars.ent -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,868 root INFO copying Bio/Entrez/DTDs/common.ent -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,870 root INFO copying Bio/Entrez/DTDs/default-classes.ent -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,872 root INFO copying Bio/Entrez/DTDs/default-mixes.ent -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,874 root INFO copying Bio/Entrez/DTDs/display.ent -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,876 root INFO copying Bio/Entrez/DTDs/eInfo_020511.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,877 root INFO copying Bio/Entrez/DTDs/eLink_090910.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,878 root INFO copying Bio/Entrez/DTDs/eLink_101123.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,880 root INFO copying Bio/Entrez/DTDs/ePost_020511.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,881 root INFO copying Bio/Entrez/DTDs/eSearch_020511.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,883 root INFO copying Bio/Entrez/DTDs/eSpell.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,884 root INFO copying Bio/Entrez/DTDs/eSummary_041029.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,885 root INFO copying Bio/Entrez/DTDs/egquery.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,887 root INFO copying Bio/Entrez/DTDs/einfo.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,888 root INFO copying Bio/Entrez/DTDs/elink.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,889 root INFO copying Bio/Entrez/DTDs/elink_020122.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,891 root INFO copying Bio/Entrez/DTDs/epost.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,892 root INFO copying Bio/Entrez/DTDs/esearch.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,894 root INFO copying Bio/Entrez/DTDs/esummary-v1.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,895 root INFO copying Bio/Entrez/DTDs/esummary_clinvar.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,896 root INFO copying Bio/Entrez/DTDs/esummary_gene.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,898 root INFO copying Bio/Entrez/DTDs/format.ent -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,899 root INFO copying Bio/Entrez/DTDs/htmltable.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,901 root INFO copying Bio/Entrez/DTDs/isoamsa.ent -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,902 root INFO copying Bio/Entrez/DTDs/isoamsb.ent -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,904 root INFO copying Bio/Entrez/DTDs/isoamsc.ent -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,905 root INFO copying Bio/Entrez/DTDs/isoamsn.ent -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,907 root INFO copying Bio/Entrez/DTDs/isoamso.ent -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,908 root INFO copying Bio/Entrez/DTDs/isoamsr.ent -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,910 root INFO copying Bio/Entrez/DTDs/isobox.ent -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,911 root INFO copying Bio/Entrez/DTDs/isocyr1.ent -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,913 root INFO copying Bio/Entrez/DTDs/isocyr2.ent -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,914 root INFO copying Bio/Entrez/DTDs/isodia.ent -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,915 root INFO copying Bio/Entrez/DTDs/isogrk1.ent -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,917 root INFO copying Bio/Entrez/DTDs/isogrk2.ent -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,918 root INFO copying Bio/Entrez/DTDs/isogrk3.ent -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,920 root INFO copying Bio/Entrez/DTDs/isogrk4.ent -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,921 root INFO copying Bio/Entrez/DTDs/isolat1.ent -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,923 root INFO copying Bio/Entrez/DTDs/isolat2.ent -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,924 root INFO copying Bio/Entrez/DTDs/isomfrk.ent -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,926 root INFO copying Bio/Entrez/DTDs/isomopf.ent -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,927 root INFO copying Bio/Entrez/DTDs/isomscr.ent -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,929 root INFO copying Bio/Entrez/DTDs/isonum.ent -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,930 root INFO copying Bio/Entrez/DTDs/isopub.ent -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,931 root INFO copying Bio/Entrez/DTDs/isotech.ent -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,933 root INFO copying Bio/Entrez/DTDs/journalmeta.ent -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,935 root INFO copying Bio/Entrez/DTDs/link.ent -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,936 root INFO copying Bio/Entrez/DTDs/list.ent -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,938 root INFO copying Bio/Entrez/DTDs/math.ent -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,940 root INFO copying Bio/Entrez/DTDs/mathml-in-pubmed.mod -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,941 root INFO copying Bio/Entrez/DTDs/mathml2-qname-1.mod -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,943 root INFO copying Bio/Entrez/DTDs/mathml2.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,945 root INFO copying Bio/Entrez/DTDs/mathml3-qname1.mod -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,946 root INFO copying Bio/Entrez/DTDs/mathml3.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,948 root INFO copying Bio/Entrez/DTDs/mathmlsetup.ent -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,949 root INFO copying Bio/Entrez/DTDs/mmlalias.ent -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,951 root INFO copying Bio/Entrez/DTDs/mmlextra.ent -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,953 root INFO copying Bio/Entrez/DTDs/modules.ent -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,954 root INFO copying Bio/Entrez/DTDs/nlm-articleset-2.0.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,956 root INFO copying Bio/Entrez/DTDs/nlmcatalogrecordset_170601.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,958 root INFO copying Bio/Entrez/DTDs/nlmcommon_011101.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,959 root INFO copying Bio/Entrez/DTDs/nlmcommon_080101.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,961 root INFO copying Bio/Entrez/DTDs/nlmcommon_090101.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,962 root INFO copying Bio/Entrez/DTDs/nlmmedline_011101.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,965 root INFO copying Bio/Entrez/DTDs/nlmmedline_080101.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,967 root INFO copying Bio/Entrez/DTDs/nlmmedline_090101.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,968 root INFO copying Bio/Entrez/DTDs/nlmmedlinecitation_011101.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,969 root INFO copying Bio/Entrez/DTDs/nlmmedlinecitation_080101.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,971 root INFO copying Bio/Entrez/DTDs/nlmmedlinecitation_090101.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,972 root INFO copying Bio/Entrez/DTDs/nlmmedlinecitationset_100101.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,974 root INFO copying Bio/Entrez/DTDs/nlmmedlinecitationset_100301.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,975 root INFO copying Bio/Entrez/DTDs/nlmmedlinecitationset_110101.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,977 root INFO copying Bio/Entrez/DTDs/nlmmedlinecitationset_120101.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,978 root INFO copying Bio/Entrez/DTDs/nlmmedlinecitationset_130101.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,980 root INFO copying Bio/Entrez/DTDs/nlmmedlinecitationset_130501.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,981 root INFO copying Bio/Entrez/DTDs/nlmmedlinecitationset_140101.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,983 root INFO copying Bio/Entrez/DTDs/nlmmedlinecitationset_150101.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,984 root INFO copying Bio/Entrez/DTDs/nlmserials_080101.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,986 root INFO copying Bio/Entrez/DTDs/nlmserials_100101.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,987 root INFO copying Bio/Entrez/DTDs/nlmsharedcatcit_080101.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,989 root INFO copying Bio/Entrez/DTDs/nlmsharedcatcit_090101.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,990 root INFO copying Bio/Entrez/DTDs/notat.ent -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,992 root INFO copying Bio/Entrez/DTDs/para.ent -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,993 root INFO copying Bio/Entrez/DTDs/phrase.ent -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,995 root INFO copying Bio/Entrez/DTDs/pmc-1.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,997 root INFO copying Bio/Entrez/DTDs/pubmed_020114.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,998 root INFO copying Bio/Entrez/DTDs/pubmed_080101.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:25,999 root INFO copying Bio/Entrez/DTDs/pubmed_090101.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:26,001 root INFO copying Bio/Entrez/DTDs/pubmed_100101.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:26,002 root INFO copying Bio/Entrez/DTDs/pubmed_100301.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:26,004 root INFO copying Bio/Entrez/DTDs/pubmed_110101.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:26,005 root INFO copying Bio/Entrez/DTDs/pubmed_120101.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:26,006 root INFO copying Bio/Entrez/DTDs/pubmed_130101.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:26,008 root INFO copying Bio/Entrez/DTDs/pubmed_130501.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:26,009 root INFO copying Bio/Entrez/DTDs/pubmed_140101.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:26,011 root INFO copying Bio/Entrez/DTDs/pubmed_150101.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:26,012 root INFO copying Bio/Entrez/DTDs/pubmed_180101.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:26,014 root INFO copying Bio/Entrez/DTDs/pubmed_180601.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:26,015 root INFO copying Bio/Entrez/DTDs/pubmed_190101.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:26,017 root INFO copying Bio/Entrez/DTDs/references.ent -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:26,019 root INFO copying Bio/Entrez/DTDs/section.ent -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:26,020 root INFO copying Bio/Entrez/DTDs/taxon.dtd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:26,022 root INFO copying Bio/Entrez/DTDs/xhtml-inlstyle-1.mod -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:26,023 root INFO copying Bio/Entrez/DTDs/xhtml-table-1.mod -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:26,024 root INFO copying Bio/Entrez/DTDs/xmlspecchars.ent -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs
2026-04-09 23:42:26,026 root INFO creating build/lib.linux-riscv64-cpython-314/Bio/Entrez/XSDs
2026-04-09 23:42:26,027 root INFO copying Bio/Entrez/XSDs/IPGReportSet.xsd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/XSDs
2026-04-09 23:42:26,028 root INFO copying Bio/Entrez/XSDs/NCBI_BlastOutput2.mod.xsd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/XSDs
2026-04-09 23:42:26,029 root INFO copying Bio/Entrez/XSDs/NCBI_BlastOutput2.xsd -> build/lib.linux-riscv64-cpython-314/Bio/Entrez/XSDs
2026-04-09 23:42:26,031 root INFO copying Bio/motifs/_pwm.c -> build/lib.linux-riscv64-cpython-314/Bio/motifs
2026-04-09 23:42:26,032 root INFO copying Bio/Nexus/cnexus.c -> build/lib.linux-riscv64-cpython-314/Bio/Nexus
2026-04-09 23:42:26,034 root INFO copying Bio/PDB/bcifhelpermodule.c -> build/lib.linux-riscv64-cpython-314/Bio/PDB
2026-04-09 23:42:26,035 root INFO copying Bio/PDB/ccealignmodule.c -> build/lib.linux-riscv64-cpython-314/Bio/PDB
2026-04-09 23:42:26,037 root INFO copying Bio/PDB/kdtrees.c -> build/lib.linux-riscv64-cpython-314/Bio/PDB
2026-04-09 23:42:26,038 root INFO copying Bio/SeqIO/_twoBitIO.c -> build/lib.linux-riscv64-cpython-314/Bio/SeqIO
2026-04-09 23:42:26,040 root INFO copying BioSQL/py.typed -> build/lib.linux-riscv64-cpython-314/BioSQL
2026-04-09 23:42:26,064 root INFO running build_ext
2026-04-09 23:42:26,072 root INFO building 'Bio.Align._aligncore' extension
2026-04-09 23:42:26,073 root INFO creating build/temp.linux-riscv64-cpython-314/Bio/Align
2026-04-09 23:42:26,075 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.14 -c Bio/Align/_aligncore.c -o build/temp.linux-riscv64-cpython-314/Bio/Align/_aligncore.o
2026-04-09 23:42:27,299 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-riscv64-cpython-314/Bio/Align/_aligncore.o -L/usr/lib -o build/lib.linux-riscv64-cpython-314/Bio/Align/_aligncore.cpython-314-riscv64-linux-musl.so
2026-04-09 23:42:27,339 root INFO building 'Bio.Align._alignmentcounts' extension
2026-04-09 23:42:27,340 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.14 -c Bio/Align/_alignmentcounts.c -o build/temp.linux-riscv64-cpython-314/Bio/Align/_alignmentcounts.o
2026-04-09 23:42:30,988 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-riscv64-cpython-314/Bio/Align/_alignmentcounts.o -L/usr/lib -o build/lib.linux-riscv64-cpython-314/Bio/Align/_alignmentcounts.cpython-314-riscv64-linux-musl.so
2026-04-09 23:42:31,035 root INFO building 'Bio.Align._codonaligner' extension
2026-04-09 23:42:31,037 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.14 -c Bio/Align/_codonaligner.c -o build/temp.linux-riscv64-cpython-314/Bio/Align/_codonaligner.o
2026-04-09 23:42:33,651 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-riscv64-cpython-314/Bio/Align/_codonaligner.o -L/usr/lib -o build/lib.linux-riscv64-cpython-314/Bio/Align/_codonaligner.cpython-314-riscv64-linux-musl.so
2026-04-09 23:42:33,694 root INFO building 'Bio.Align._pairwisealigner' extension
2026-04-09 23:42:33,695 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.14 -c Bio/Align/_pairwisealigner.c -o build/temp.linux-riscv64-cpython-314/Bio/Align/_pairwisealigner.o
2026-04-09 23:43:11,274 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-riscv64-cpython-314/Bio/Align/_pairwisealigner.o -L/usr/lib -o build/lib.linux-riscv64-cpython-314/Bio/Align/_pairwisealigner.cpython-314-riscv64-linux-musl.so
2026-04-09 23:43:11,380 root INFO building 'Bio.Align.substitution_matrices._arraycore' extension
2026-04-09 23:43:11,381 root INFO creating build/temp.linux-riscv64-cpython-314/Bio/Align/substitution_matrices
2026-04-09 23:43:11,382 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.14 -c Bio/Align//substitution_matrices/_arraycore.c -o build/temp.linux-riscv64-cpython-314/Bio/Align/substitution_matrices/_arraycore.o
2026-04-09 23:43:12,534 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-riscv64-cpython-314/Bio/Align/substitution_matrices/_arraycore.o -L/usr/lib -o build/lib.linux-riscv64-cpython-314/Bio/Align/substitution_matrices/_arraycore.cpython-314-riscv64-linux-musl.so
2026-04-09 23:43:12,574 root INFO building 'Bio.cpairwise2' extension
2026-04-09 23:43:12,575 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.14 -c Bio/cpairwise2module.c -o build/temp.linux-riscv64-cpython-314/Bio/cpairwise2module.o
2026-04-09 23:43:14,313 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-riscv64-cpython-314/Bio/cpairwise2module.o -L/usr/lib -o build/lib.linux-riscv64-cpython-314/Bio/cpairwise2.cpython-314-riscv64-linux-musl.so
2026-04-09 23:43:14,354 root INFO building 'Bio.Nexus.cnexus' extension
2026-04-09 23:43:14,355 root INFO creating build/temp.linux-riscv64-cpython-314/Bio/Nexus
2026-04-09 23:43:14,356 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.14 -c Bio/Nexus/cnexus.c -o build/temp.linux-riscv64-cpython-314/Bio/Nexus/cnexus.o
2026-04-09 23:43:15,188 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-riscv64-cpython-314/Bio/Nexus/cnexus.o -L/usr/lib -o build/lib.linux-riscv64-cpython-314/Bio/Nexus/cnexus.cpython-314-riscv64-linux-musl.so
2026-04-09 23:43:15,228 root INFO building 'Bio.motifs._pwm' extension
2026-04-09 23:43:15,229 root INFO creating build/temp.linux-riscv64-cpython-314/Bio/motifs
2026-04-09 23:43:15,230 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.14 -c Bio/motifs/_pwm.c -o build/temp.linux-riscv64-cpython-314/Bio/motifs/_pwm.o
2026-04-09 23:43:16,102 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-riscv64-cpython-314/Bio/motifs/_pwm.o -L/usr/lib -o build/lib.linux-riscv64-cpython-314/Bio/motifs/_pwm.cpython-314-riscv64-linux-musl.so
2026-04-09 23:43:16,143 root INFO building 'Bio.Cluster._cluster' extension
2026-04-09 23:43:16,144 root INFO creating build/temp.linux-riscv64-cpython-314/Bio/Cluster
2026-04-09 23:43:16,145 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.14 -c Bio/Cluster/cluster.c -o build/temp.linux-riscv64-cpython-314/Bio/Cluster/cluster.o -DCLUSTER_USE_PYTHON_MEMORY
2026-04-09 23:43:29,171 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.14 -c Bio/Cluster/clustermodule.c -o build/temp.linux-riscv64-cpython-314/Bio/Cluster/clustermodule.o -DCLUSTER_USE_PYTHON_MEMORY
2026-04-09 23:43:32,558 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-riscv64-cpython-314/Bio/Cluster/cluster.o build/temp.linux-riscv64-cpython-314/Bio/Cluster/clustermodule.o -L/usr/lib -o build/lib.linux-riscv64-cpython-314/Bio/Cluster/_cluster.cpython-314-riscv64-linux-musl.so
2026-04-09 23:43:32,613 root INFO building 'Bio.PDB.ccealign' extension
2026-04-09 23:43:32,614 root INFO creating build/temp.linux-riscv64-cpython-314/Bio/PDB
2026-04-09 23:43:32,615 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.14 -c Bio/PDB/ccealignmodule.c -o build/temp.linux-riscv64-cpython-314/Bio/PDB/ccealignmodule.o
2026-04-09 23:43:34,273 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-riscv64-cpython-314/Bio/PDB/ccealignmodule.o -L/usr/lib -o build/lib.linux-riscv64-cpython-314/Bio/PDB/ccealign.cpython-314-riscv64-linux-musl.so
2026-04-09 23:43:34,313 root INFO building 'Bio.PDB.kdtrees' extension
2026-04-09 23:43:34,314 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.14 -c Bio/PDB/kdtrees.c -o build/temp.linux-riscv64-cpython-314/Bio/PDB/kdtrees.o
2026-04-09 23:43:36,349 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-riscv64-cpython-314/Bio/PDB/kdtrees.o -L/usr/lib -o build/lib.linux-riscv64-cpython-314/Bio/PDB/kdtrees.cpython-314-riscv64-linux-musl.so
2026-04-09 23:43:36,392 root INFO building 'Bio.PDB._bcif_helper' extension
2026-04-09 23:43:36,393 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.14 -c Bio/PDB/bcifhelpermodule.c -o build/temp.linux-riscv64-cpython-314/Bio/PDB/bcifhelpermodule.o
2026-04-09 23:43:37,136 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-riscv64-cpython-314/Bio/PDB/bcifhelpermodule.o -L/usr/lib -o build/lib.linux-riscv64-cpython-314/Bio/PDB/_bcif_helper.cpython-314-riscv64-linux-musl.so
2026-04-09 23:43:37,175 root INFO building 'Bio.SeqIO._twoBitIO' extension
2026-04-09 23:43:37,176 root INFO creating build/temp.linux-riscv64-cpython-314/Bio/SeqIO
2026-04-09 23:43:37,177 root INFO cc -Os -fstack-clash-protection -Wformat -Werror=format-security -fPIC -I/usr/include/python3.14 -c Bio/SeqIO/_twoBitIO.c -o build/temp.linux-riscv64-cpython-314/Bio/SeqIO/_twoBitIO.o
2026-04-09 23:43:38,125 root INFO cc -shared -Wl,--as-needed,-O1,--sort-common -Os -fstack-clash-protection -Wformat -Werror=format-security build/temp.linux-riscv64-cpython-314/Bio/SeqIO/_twoBitIO.o -L/usr/lib -o build/lib.linux-riscv64-cpython-314/Bio/SeqIO/_twoBitIO.cpython-314-riscv64-linux-musl.so
2026-04-09 23:43:38,191 root INFO installing to build/bdist.linux-riscv64/wheel
2026-04-09 23:43:38,192 root INFO running install
2026-04-09 23:43:38,229 root INFO running install_lib
2026-04-09 23:43:38,243 root INFO creating build/bdist.linux-riscv64/wheel
2026-04-09 23:43:38,244 root INFO creating build/bdist.linux-riscv64/wheel/BioSQL
2026-04-09 23:43:38,245 root INFO copying build/lib.linux-riscv64-cpython-314/BioSQL/BioSeq.py -> build/bdist.linux-riscv64/wheel/./BioSQL
2026-04-09 23:43:38,246 root INFO copying build/lib.linux-riscv64-cpython-314/BioSQL/DBUtils.py -> build/bdist.linux-riscv64/wheel/./BioSQL
2026-04-09 23:43:38,248 root INFO copying build/lib.linux-riscv64-cpython-314/BioSQL/__init__.py -> build/bdist.linux-riscv64/wheel/./BioSQL
2026-04-09 23:43:38,249 root INFO copying build/lib.linux-riscv64-cpython-314/BioSQL/py.typed -> build/bdist.linux-riscv64/wheel/./BioSQL
2026-04-09 23:43:38,250 root INFO copying build/lib.linux-riscv64-cpython-314/BioSQL/BioSeqDatabase.py -> build/bdist.linux-riscv64/wheel/./BioSQL
2026-04-09 23:43:38,251 root INFO copying build/lib.linux-riscv64-cpython-314/BioSQL/Loader.py -> build/bdist.linux-riscv64/wheel/./BioSQL
2026-04-09 23:43:38,254 root INFO creating build/bdist.linux-riscv64/wheel/Bio
2026-04-09 23:43:38,255 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Affy
2026-04-09 23:43:38,256 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Affy/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/Affy
2026-04-09 23:43:38,257 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Affy/CelFile.py -> build/bdist.linux-riscv64/wheel/./Bio/Affy
2026-04-09 23:43:38,258 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/SeqRecord.py -> build/bdist.linux-riscv64/wheel/./Bio
2026-04-09 23:43:38,261 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Medline
2026-04-09 23:43:38,262 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Medline/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/Medline
2026-04-09 23:43:38,263 root INFO creating build/bdist.linux-riscv64/wheel/Bio/GenBank
2026-04-09 23:43:38,264 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/GenBank/Record.py -> build/bdist.linux-riscv64/wheel/./Bio/GenBank
2026-04-09 23:43:38,266 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/GenBank/Scanner.py -> build/bdist.linux-riscv64/wheel/./Bio/GenBank
2026-04-09 23:43:38,268 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/GenBank/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/GenBank
2026-04-09 23:43:38,269 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/GenBank/utils.py -> build/bdist.linux-riscv64/wheel/./Bio/GenBank
2026-04-09 23:43:38,271 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Data
2026-04-09 23:43:38,272 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Data/CodonTable.py -> build/bdist.linux-riscv64/wheel/./Bio/Data
2026-04-09 23:43:38,273 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Data/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/Data
2026-04-09 23:43:38,275 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Data/PDBData.py -> build/bdist.linux-riscv64/wheel/./Bio/Data
2026-04-09 23:43:38,276 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Data/IUPACData.py -> build/bdist.linux-riscv64/wheel/./Bio/Data
2026-04-09 23:43:38,278 root INFO creating build/bdist.linux-riscv64/wheel/Bio/AlignIO
2026-04-09 23:43:38,279 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/AlignIO/Interfaces.py -> build/bdist.linux-riscv64/wheel/./Bio/AlignIO
2026-04-09 23:43:38,280 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/AlignIO/MauveIO.py -> build/bdist.linux-riscv64/wheel/./Bio/AlignIO
2026-04-09 23:43:38,282 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/AlignIO/PhylipIO.py -> build/bdist.linux-riscv64/wheel/./Bio/AlignIO
2026-04-09 23:43:38,283 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/AlignIO/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/AlignIO
2026-04-09 23:43:38,284 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/AlignIO/MsfIO.py -> build/bdist.linux-riscv64/wheel/./Bio/AlignIO
2026-04-09 23:43:38,286 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/AlignIO/StockholmIO.py -> build/bdist.linux-riscv64/wheel/./Bio/AlignIO
2026-04-09 23:43:38,287 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/AlignIO/MafIO.py -> build/bdist.linux-riscv64/wheel/./Bio/AlignIO
2026-04-09 23:43:38,289 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/AlignIO/EmbossIO.py -> build/bdist.linux-riscv64/wheel/./Bio/AlignIO
2026-04-09 23:43:38,290 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/AlignIO/NexusIO.py -> build/bdist.linux-riscv64/wheel/./Bio/AlignIO
2026-04-09 23:43:38,291 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/AlignIO/FastaIO.py -> build/bdist.linux-riscv64/wheel/./Bio/AlignIO
2026-04-09 23:43:38,293 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/AlignIO/ClustalIO.py -> build/bdist.linux-riscv64/wheel/./Bio/AlignIO
2026-04-09 23:43:38,295 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Graphics
2026-04-09 23:43:38,296 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Graphics/ColorSpiral.py -> build/bdist.linux-riscv64/wheel/./Bio/Graphics
2026-04-09 23:43:38,297 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Graphics/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/Graphics
2026-04-09 23:43:38,298 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Graphics/KGML_vis.py -> build/bdist.linux-riscv64/wheel/./Bio/Graphics
2026-04-09 23:43:38,300 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Graphics/Distribution.py -> build/bdist.linux-riscv64/wheel/./Bio/Graphics
2026-04-09 23:43:38,301 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Graphics/BasicChromosome.py -> build/bdist.linux-riscv64/wheel/./Bio/Graphics
2026-04-09 23:43:38,302 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Graphics/DisplayRepresentation.py -> build/bdist.linux-riscv64/wheel/./Bio/Graphics
2026-04-09 23:43:38,304 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Graphics/Comparative.py -> build/bdist.linux-riscv64/wheel/./Bio/Graphics
2026-04-09 23:43:38,306 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Graphics/GenomeDiagram
2026-04-09 23:43:38,306 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Graphics/GenomeDiagram/_CrossLink.py -> build/bdist.linux-riscv64/wheel/./Bio/Graphics/GenomeDiagram
2026-04-09 23:43:38,308 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Graphics/GenomeDiagram/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/Graphics/GenomeDiagram
2026-04-09 23:43:38,309 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Graphics/GenomeDiagram/_AbstractDrawer.py -> build/bdist.linux-riscv64/wheel/./Bio/Graphics/GenomeDiagram
2026-04-09 23:43:38,311 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Graphics/GenomeDiagram/_FeatureSet.py -> build/bdist.linux-riscv64/wheel/./Bio/Graphics/GenomeDiagram
2026-04-09 23:43:38,312 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Graphics/GenomeDiagram/_Diagram.py -> build/bdist.linux-riscv64/wheel/./Bio/Graphics/GenomeDiagram
2026-04-09 23:43:38,313 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Graphics/GenomeDiagram/_Track.py -> build/bdist.linux-riscv64/wheel/./Bio/Graphics/GenomeDiagram
2026-04-09 23:43:38,315 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Graphics/GenomeDiagram/_CircularDrawer.py -> build/bdist.linux-riscv64/wheel/./Bio/Graphics/GenomeDiagram
2026-04-09 23:43:38,317 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Graphics/GenomeDiagram/_LinearDrawer.py -> build/bdist.linux-riscv64/wheel/./Bio/Graphics/GenomeDiagram
2026-04-09 23:43:38,318 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Graphics/GenomeDiagram/_GraphSet.py -> build/bdist.linux-riscv64/wheel/./Bio/Graphics/GenomeDiagram
2026-04-09 23:43:38,320 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Graphics/GenomeDiagram/_Colors.py -> build/bdist.linux-riscv64/wheel/./Bio/Graphics/GenomeDiagram
2026-04-09 23:43:38,321 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Graphics/GenomeDiagram/_Feature.py -> build/bdist.linux-riscv64/wheel/./Bio/Graphics/GenomeDiagram
2026-04-09 23:43:38,323 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Graphics/GenomeDiagram/_Graph.py -> build/bdist.linux-riscv64/wheel/./Bio/Graphics/GenomeDiagram
2026-04-09 23:43:38,324 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Align
2026-04-09 23:43:38,325 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Align/_codonaligner.c -> build/bdist.linux-riscv64/wheel/./Bio/Align
2026-04-09 23:43:38,327 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Align/exonerate.py -> build/bdist.linux-riscv64/wheel/./Bio/Align
2026-04-09 23:43:38,328 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Align/bigbed.py -> build/bdist.linux-riscv64/wheel/./Bio/Align
2026-04-09 23:43:38,330 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Align/_pairwisealigner.h -> build/bdist.linux-riscv64/wheel/./Bio/Align
2026-04-09 23:43:38,332 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Align/substitution_matrices
2026-04-09 23:43:38,333 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Align/substitution_matrices/_arraycore.c -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices
2026-04-09 23:43:38,334 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Align/substitution_matrices/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices
2026-04-09 23:43:38,336 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Align/substitution_matrices/data
2026-04-09 23:43:38,337 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Align/substitution_matrices/data/BLOSUM50 -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2026-04-09 23:43:38,338 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Align/substitution_matrices/data/MEGABLAST -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2026-04-09 23:43:38,339 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Align/substitution_matrices/data/BLASTN -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2026-04-09 23:43:38,341 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Align/substitution_matrices/data/MCLACHLAN -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2026-04-09 23:43:38,342 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Align/substitution_matrices/data/JONES -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2026-04-09 23:43:38,343 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Align/substitution_matrices/data/BLOSUM90 -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2026-04-09 23:43:38,345 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Align/substitution_matrices/data/GENETIC -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2026-04-09 23:43:38,346 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Align/substitution_matrices/data/DAYHOFF -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2026-04-09 23:43:38,347 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Align/substitution_matrices/data/BENNER74 -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2026-04-09 23:43:38,349 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Align/substitution_matrices/data/GONNET1992 -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2026-04-09 23:43:38,350 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Align/substitution_matrices/data/RAO -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2026-04-09 23:43:38,351 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Align/substitution_matrices/data/BENNER22 -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2026-04-09 23:43:38,353 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Align/substitution_matrices/data/RISLER -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2026-04-09 23:43:38,354 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Align/substitution_matrices/data/MDM78 -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2026-04-09 23:43:38,355 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Align/substitution_matrices/data/NUC.4.4 -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2026-04-09 23:43:38,357 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Align/substitution_matrices/data/PAM70 -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2026-04-09 23:43:38,358 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Align/substitution_matrices/data/JOHNSON -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2026-04-09 23:43:38,359 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Align/substitution_matrices/data/LEVIN -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2026-04-09 23:43:38,360 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Align/substitution_matrices/data/HOXD70 -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2026-04-09 23:43:38,362 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Align/substitution_matrices/data/PAM30 -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2026-04-09 23:43:38,363 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Align/substitution_matrices/data/STR -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2026-04-09 23:43:38,364 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Align/substitution_matrices/data/TRANS -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2026-04-09 23:43:38,365 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Align/substitution_matrices/data/BLOSUM80 -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2026-04-09 23:43:38,367 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Align/substitution_matrices/data/BENNER6 -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2026-04-09 23:43:38,368 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Align/substitution_matrices/data/SCHNEIDER -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2026-04-09 23:43:38,370 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Align/substitution_matrices/data/BLASTP -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2026-04-09 23:43:38,371 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Align/substitution_matrices/data/BLOSUM62 -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2026-04-09 23:43:38,372 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Align/substitution_matrices/data/BLOSUM45 -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2026-04-09 23:43:38,373 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Align/substitution_matrices/data/FENG -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2026-04-09 23:43:38,375 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Align/substitution_matrices/data/PAM250 -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices/data
2026-04-09 23:43:38,376 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Align/substitution_matrices/_arraycore.h -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices
2026-04-09 23:43:38,377 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Align/substitution_matrices/_arraycore.cpython-314-riscv64-linux-musl.so -> build/bdist.linux-riscv64/wheel/./Bio/Align/substitution_matrices
2026-04-09 23:43:38,379 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Align/hhr.py -> build/bdist.linux-riscv64/wheel/./Bio/Align
2026-04-09 23:43:38,380 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Align/chain.py -> build/bdist.linux-riscv64/wheel/./Bio/Align
2026-04-09 23:43:38,381 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Align/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/Align
2026-04-09 23:43:38,384 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Align/phylip.py -> build/bdist.linux-riscv64/wheel/./Bio/Align
2026-04-09 23:43:38,385 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Align/bed.py -> build/bdist.linux-riscv64/wheel/./Bio/Align
2026-04-09 23:43:38,386 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Align/_pairwisealigner.c -> build/bdist.linux-riscv64/wheel/./Bio/Align
2026-04-09 23:43:38,390 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Align/AlignInfo.py -> build/bdist.linux-riscv64/wheel/./Bio/Align
2026-04-09 23:43:38,391 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Align/bigpsl.py -> build/bdist.linux-riscv64/wheel/./Bio/Align
2026-04-09 23:43:38,393 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Align/interfaces.py -> build/bdist.linux-riscv64/wheel/./Bio/Align
2026-04-09 23:43:38,395 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Align/emboss.py -> build/bdist.linux-riscv64/wheel/./Bio/Align
2026-04-09 23:43:38,396 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Align/analysis.py -> build/bdist.linux-riscv64/wheel/./Bio/Align
2026-04-09 23:43:38,398 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Align/bigmaf.py -> build/bdist.linux-riscv64/wheel/./Bio/Align
2026-04-09 23:43:38,399 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Align/stockholm.py -> build/bdist.linux-riscv64/wheel/./Bio/Align
2026-04-09 23:43:38,401 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Align/clustal.py -> build/bdist.linux-riscv64/wheel/./Bio/Align
2026-04-09 23:43:38,402 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Align/fasta.py -> build/bdist.linux-riscv64/wheel/./Bio/Align
2026-04-09 23:43:38,403 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Align/maf.py -> build/bdist.linux-riscv64/wheel/./Bio/Align
2026-04-09 23:43:38,405 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Align/_aligncore.c -> build/bdist.linux-riscv64/wheel/./Bio/Align
2026-04-09 23:43:38,406 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Align/nexus.py -> build/bdist.linux-riscv64/wheel/./Bio/Align
2026-04-09 23:43:38,408 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Align/mauve.py -> build/bdist.linux-riscv64/wheel/./Bio/Align
2026-04-09 23:43:38,409 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Align/_alignmentcounts.cpython-314-riscv64-linux-musl.so -> build/bdist.linux-riscv64/wheel/./Bio/Align
2026-04-09 23:43:38,411 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Align/sam.py -> build/bdist.linux-riscv64/wheel/./Bio/Align
2026-04-09 23:43:38,412 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Align/psl.py -> build/bdist.linux-riscv64/wheel/./Bio/Align
2026-04-09 23:43:38,413 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Align/_alignmentcounts.c -> build/bdist.linux-riscv64/wheel/./Bio/Align
2026-04-09 23:43:38,415 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Align/_pairwisealigner.cpython-314-riscv64-linux-musl.so -> build/bdist.linux-riscv64/wheel/./Bio/Align
2026-04-09 23:43:38,418 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Align/a2m.py -> build/bdist.linux-riscv64/wheel/./Bio/Align
2026-04-09 23:43:38,419 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Align/_aligncore.cpython-314-riscv64-linux-musl.so -> build/bdist.linux-riscv64/wheel/./Bio/Align
2026-04-09 23:43:38,421 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Align/_codonaligner.cpython-314-riscv64-linux-musl.so -> build/bdist.linux-riscv64/wheel/./Bio/Align
2026-04-09 23:43:38,422 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Align/tabular.py -> build/bdist.linux-riscv64/wheel/./Bio/Align
2026-04-09 23:43:38,424 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Align/msf.py -> build/bdist.linux-riscv64/wheel/./Bio/Align
2026-04-09 23:43:38,425 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/cpairwise2module.c -> build/bdist.linux-riscv64/wheel/./Bio
2026-04-09 23:43:38,426 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Seq.py -> build/bdist.linux-riscv64/wheel/./Bio
2026-04-09 23:43:38,429 root INFO creating build/bdist.linux-riscv64/wheel/Bio/NMR
2026-04-09 23:43:38,430 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/NMR/NOEtools.py -> build/bdist.linux-riscv64/wheel/./Bio/NMR
2026-04-09 23:43:38,431 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/NMR/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/NMR
2026-04-09 23:43:38,432 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/NMR/xpktools.py -> build/bdist.linux-riscv64/wheel/./Bio/NMR
2026-04-09 23:43:38,434 root INFO creating build/bdist.linux-riscv64/wheel/Bio/SVDSuperimposer
2026-04-09 23:43:38,435 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/SVDSuperimposer/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/SVDSuperimposer
2026-04-09 23:43:38,436 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/cpairwise2.cpython-314-riscv64-linux-musl.so -> build/bdist.linux-riscv64/wheel/./Bio
2026-04-09 23:43:38,438 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/bgzf.py -> build/bdist.linux-riscv64/wheel/./Bio
2026-04-09 23:43:38,439 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio
2026-04-09 23:43:38,441 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/SeqFeature.py -> build/bdist.linux-riscv64/wheel/./Bio
2026-04-09 23:43:38,443 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Nexus
2026-04-09 23:43:38,444 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Nexus/cnexus.cpython-314-riscv64-linux-musl.so -> build/bdist.linux-riscv64/wheel/./Bio/Nexus
2026-04-09 23:43:38,445 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Nexus/Nodes.py -> build/bdist.linux-riscv64/wheel/./Bio/Nexus
2026-04-09 23:43:38,446 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Nexus/Nexus.py -> build/bdist.linux-riscv64/wheel/./Bio/Nexus
2026-04-09 23:43:38,448 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Nexus/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/Nexus
2026-04-09 23:43:38,450 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Nexus/cnexus.c -> build/bdist.linux-riscv64/wheel/./Bio/Nexus
2026-04-09 23:43:38,451 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Nexus/StandardData.py -> build/bdist.linux-riscv64/wheel/./Bio/Nexus
2026-04-09 23:43:38,452 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Nexus/Trees.py -> build/bdist.linux-riscv64/wheel/./Bio/Nexus
2026-04-09 23:43:38,454 root INFO creating build/bdist.linux-riscv64/wheel/Bio/SearchIO
2026-04-09 23:43:38,455 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/SearchIO/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO
2026-04-09 23:43:38,457 root INFO creating build/bdist.linux-riscv64/wheel/Bio/SearchIO/HHsuiteIO
2026-04-09 23:43:38,458 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/SearchIO/HHsuiteIO/hhsuite2_text.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO/HHsuiteIO
2026-04-09 23:43:38,459 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/SearchIO/HHsuiteIO/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO/HHsuiteIO
2026-04-09 23:43:38,460 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/SearchIO/BlatIO.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO
2026-04-09 23:43:38,462 root INFO creating build/bdist.linux-riscv64/wheel/Bio/SearchIO/HmmerIO
2026-04-09 23:43:38,463 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/SearchIO/HmmerIO/hmmer3_domtab.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO/HmmerIO
2026-04-09 23:43:38,464 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/SearchIO/HmmerIO/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO/HmmerIO
2026-04-09 23:43:38,466 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/SearchIO/HmmerIO/hmmer2_text.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO/HmmerIO
2026-04-09 23:43:38,467 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/SearchIO/HmmerIO/hmmer3_text.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO/HmmerIO
2026-04-09 23:43:38,469 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/SearchIO/HmmerIO/hmmer3_tab.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO/HmmerIO
2026-04-09 23:43:38,470 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/SearchIO/HmmerIO/_base.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO/HmmerIO
2026-04-09 23:43:38,472 root INFO creating build/bdist.linux-riscv64/wheel/Bio/SearchIO/BlastIO
2026-04-09 23:43:38,473 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/SearchIO/BlastIO/blast_tab.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO/BlastIO
2026-04-09 23:43:38,474 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/SearchIO/BlastIO/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO/BlastIO
2026-04-09 23:43:38,476 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/SearchIO/BlastIO/blast_xml.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO/BlastIO
2026-04-09 23:43:38,478 root INFO creating build/bdist.linux-riscv64/wheel/Bio/SearchIO/InterproscanIO
2026-04-09 23:43:38,479 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/SearchIO/InterproscanIO/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO/InterproscanIO
2026-04-09 23:43:38,480 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/SearchIO/InterproscanIO/interproscan_xml.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO/InterproscanIO
2026-04-09 23:43:38,482 root INFO creating build/bdist.linux-riscv64/wheel/Bio/SearchIO/_model
2026-04-09 23:43:38,483 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/SearchIO/_model/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO/_model
2026-04-09 23:43:38,484 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/SearchIO/_model/_base.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO/_model
2026-04-09 23:43:38,485 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/SearchIO/_model/query.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO/_model
2026-04-09 23:43:38,487 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/SearchIO/_model/hsp.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO/_model
2026-04-09 23:43:38,488 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/SearchIO/_model/hit.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO/_model
2026-04-09 23:43:38,490 root INFO creating build/bdist.linux-riscv64/wheel/Bio/SearchIO/ExonerateIO
2026-04-09 23:43:38,491 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/SearchIO/ExonerateIO/exonerate_vulgar.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO/ExonerateIO
2026-04-09 23:43:38,492 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/SearchIO/ExonerateIO/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO/ExonerateIO
2026-04-09 23:43:38,494 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/SearchIO/ExonerateIO/exonerate_text.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO/ExonerateIO
2026-04-09 23:43:38,495 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/SearchIO/ExonerateIO/_base.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO/ExonerateIO
2026-04-09 23:43:38,497 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/SearchIO/ExonerateIO/exonerate_cigar.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO/ExonerateIO
2026-04-09 23:43:38,498 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/SearchIO/_index.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO
2026-04-09 23:43:38,499 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/SearchIO/FastaIO.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO
2026-04-09 23:43:38,501 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/SearchIO/_utils.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO
2026-04-09 23:43:38,502 root INFO creating build/bdist.linux-riscv64/wheel/Bio/SearchIO/InfernalIO
2026-04-09 23:43:38,503 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/SearchIO/InfernalIO/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO/InfernalIO
2026-04-09 23:43:38,505 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/SearchIO/InfernalIO/infernal_text.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO/InfernalIO
2026-04-09 23:43:38,506 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/SearchIO/InfernalIO/infernal_tab.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO/InfernalIO
2026-04-09 23:43:38,507 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/SearchIO/InfernalIO/_base.py -> build/bdist.linux-riscv64/wheel/./Bio/SearchIO/InfernalIO
2026-04-09 23:43:38,509 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Blast
2026-04-09 23:43:38,510 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Blast/NCBIWWW.py -> build/bdist.linux-riscv64/wheel/./Bio/Blast
2026-04-09 23:43:38,511 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Blast/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/Blast
2026-04-09 23:43:38,513 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Blast/_parser.py -> build/bdist.linux-riscv64/wheel/./Bio/Blast
2026-04-09 23:43:38,515 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Blast/_writers.py -> build/bdist.linux-riscv64/wheel/./Bio/Blast
2026-04-09 23:43:38,516 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Blast/NCBIXML.py -> build/bdist.linux-riscv64/wheel/./Bio/Blast
2026-04-09 23:43:38,518 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Geo
2026-04-09 23:43:38,519 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Geo/Record.py -> build/bdist.linux-riscv64/wheel/./Bio/Geo
2026-04-09 23:43:38,520 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Geo/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/Geo
2026-04-09 23:43:38,522 root INFO creating build/bdist.linux-riscv64/wheel/Bio/UniProt
2026-04-09 23:43:38,523 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/UniProt/GOA.py -> build/bdist.linux-riscv64/wheel/./Bio/UniProt
2026-04-09 23:43:38,524 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/UniProt/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/UniProt
2026-04-09 23:43:38,525 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/File.py -> build/bdist.linux-riscv64/wheel/./Bio
2026-04-09 23:43:38,527 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/py.typed -> build/bdist.linux-riscv64/wheel/./Bio
2026-04-09 23:43:38,528 root INFO creating build/bdist.linux-riscv64/wheel/Bio/SCOP
2026-04-09 23:43:38,529 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/SCOP/Raf.py -> build/bdist.linux-riscv64/wheel/./Bio/SCOP
2026-04-09 23:43:38,531 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/SCOP/Residues.py -> build/bdist.linux-riscv64/wheel/./Bio/SCOP
2026-04-09 23:43:38,532 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/SCOP/Cla.py -> build/bdist.linux-riscv64/wheel/./Bio/SCOP
2026-04-09 23:43:38,533 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/SCOP/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/SCOP
2026-04-09 23:43:38,535 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/SCOP/Dom.py -> build/bdist.linux-riscv64/wheel/./Bio/SCOP
2026-04-09 23:43:38,536 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/SCOP/Hie.py -> build/bdist.linux-riscv64/wheel/./Bio/SCOP
2026-04-09 23:43:38,537 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/SCOP/Des.py -> build/bdist.linux-riscv64/wheel/./Bio/SCOP
2026-04-09 23:43:38,539 root INFO creating build/bdist.linux-riscv64/wheel/Bio/UniGene
2026-04-09 23:43:38,540 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/UniGene/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/UniGene
2026-04-09 23:43:38,542 root INFO creating build/bdist.linux-riscv64/wheel/Bio/motifs
2026-04-09 23:43:38,542 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/motifs/_pwm.cpython-314-riscv64-linux-musl.so -> build/bdist.linux-riscv64/wheel/./Bio/motifs
2026-04-09 23:43:38,544 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/motifs/pfm.py -> build/bdist.linux-riscv64/wheel/./Bio/motifs
2026-04-09 23:43:38,545 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/motifs/thresholds.py -> build/bdist.linux-riscv64/wheel/./Bio/motifs
2026-04-09 23:43:38,547 root INFO creating build/bdist.linux-riscv64/wheel/Bio/motifs/jaspar
2026-04-09 23:43:38,548 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/motifs/jaspar/db.py -> build/bdist.linux-riscv64/wheel/./Bio/motifs/jaspar
2026-04-09 23:43:38,550 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/motifs/jaspar/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/motifs/jaspar
2026-04-09 23:43:38,551 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/motifs/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/motifs
2026-04-09 23:43:38,552 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/motifs/minimal.py -> build/bdist.linux-riscv64/wheel/./Bio/motifs
2026-04-09 23:43:38,554 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/motifs/meme.py -> build/bdist.linux-riscv64/wheel/./Bio/motifs
2026-04-09 23:43:38,555 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/motifs/alignace.py -> build/bdist.linux-riscv64/wheel/./Bio/motifs
2026-04-09 23:43:38,557 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/motifs/matrix.py -> build/bdist.linux-riscv64/wheel/./Bio/motifs
2026-04-09 23:43:38,558 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/motifs/clusterbuster.py -> build/bdist.linux-riscv64/wheel/./Bio/motifs
2026-04-09 23:43:38,559 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/motifs/transfac.py -> build/bdist.linux-riscv64/wheel/./Bio/motifs
2026-04-09 23:43:38,561 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/motifs/mast.py -> build/bdist.linux-riscv64/wheel/./Bio/motifs
2026-04-09 23:43:38,562 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/motifs/xms.py -> build/bdist.linux-riscv64/wheel/./Bio/motifs
2026-04-09 23:43:38,563 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/motifs/_pwm.c -> build/bdist.linux-riscv64/wheel/./Bio/motifs
2026-04-09 23:43:38,565 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Sequencing
2026-04-09 23:43:38,566 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Sequencing/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/Sequencing
2026-04-09 23:43:38,567 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Sequencing/Ace.py -> build/bdist.linux-riscv64/wheel/./Bio/Sequencing
2026-04-09 23:43:38,568 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Sequencing/Phd.py -> build/bdist.linux-riscv64/wheel/./Bio/Sequencing
2026-04-09 23:43:38,570 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Restriction
2026-04-09 23:43:38,571 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Restriction/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/Restriction
2026-04-09 23:43:38,572 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Restriction/PrintFormat.py -> build/bdist.linux-riscv64/wheel/./Bio/Restriction
2026-04-09 23:43:38,574 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Restriction/Restriction_Dictionary.py -> build/bdist.linux-riscv64/wheel/./Bio/Restriction
2026-04-09 23:43:38,578 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Restriction/Restriction.py -> build/bdist.linux-riscv64/wheel/./Bio/Restriction
2026-04-09 23:43:38,581 root INFO creating build/bdist.linux-riscv64/wheel/Bio/KEGG
2026-04-09 23:43:38,582 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/KEGG/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/KEGG
2026-04-09 23:43:38,584 root INFO creating build/bdist.linux-riscv64/wheel/Bio/KEGG/KGML
2026-04-09 23:43:38,585 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/KEGG/KGML/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/KEGG/KGML
2026-04-09 23:43:38,586 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/KEGG/KGML/KGML_parser.py -> build/bdist.linux-riscv64/wheel/./Bio/KEGG/KGML
2026-04-09 23:43:38,588 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/KEGG/KGML/KGML_pathway.py -> build/bdist.linux-riscv64/wheel/./Bio/KEGG/KGML
2026-04-09 23:43:38,590 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/KEGG/REST.py -> build/bdist.linux-riscv64/wheel/./Bio/KEGG
2026-04-09 23:43:38,592 root INFO creating build/bdist.linux-riscv64/wheel/Bio/KEGG/Enzyme
2026-04-09 23:43:38,592 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/KEGG/Enzyme/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/KEGG/Enzyme
2026-04-09 23:43:38,594 root INFO creating build/bdist.linux-riscv64/wheel/Bio/KEGG/Gene
2026-04-09 23:43:38,595 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/KEGG/Gene/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/KEGG/Gene
2026-04-09 23:43:38,597 root INFO creating build/bdist.linux-riscv64/wheel/Bio/KEGG/Map
2026-04-09 23:43:38,597 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/KEGG/Map/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/KEGG/Map
2026-04-09 23:43:38,599 root INFO creating build/bdist.linux-riscv64/wheel/Bio/KEGG/Compound
2026-04-09 23:43:38,600 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/KEGG/Compound/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/KEGG/Compound
2026-04-09 23:43:38,601 root INFO creating build/bdist.linux-riscv64/wheel/Bio/phenotype
2026-04-09 23:43:38,602 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/phenotype/phen_micro.py -> build/bdist.linux-riscv64/wheel/./Bio/phenotype
2026-04-09 23:43:38,604 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/phenotype/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/phenotype
2026-04-09 23:43:38,605 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/phenotype/pm_fitting.py -> build/bdist.linux-riscv64/wheel/./Bio/phenotype
2026-04-09 23:43:38,607 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Phylo
2026-04-09 23:43:38,608 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Phylo/NeXMLIO.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo
2026-04-09 23:43:38,609 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Phylo/CDAOIO.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo
2026-04-09 23:43:38,611 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Phylo/_cdao_owl.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo
2026-04-09 23:43:38,613 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Phylo/CDAO.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo
2026-04-09 23:43:38,614 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Phylo/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo
2026-04-09 23:43:38,616 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Phylo/TreeConstruction.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo
2026-04-09 23:43:38,617 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Phylo/PAML
2026-04-09 23:43:38,618 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Phylo/PAML/_paml.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo/PAML
2026-04-09 23:43:38,620 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Phylo/PAML/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo/PAML
2026-04-09 23:43:38,621 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Phylo/PAML/chi2.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo/PAML
2026-04-09 23:43:38,622 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Phylo/PAML/codeml.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo/PAML
2026-04-09 23:43:38,623 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Phylo/PAML/_parse_baseml.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo/PAML
2026-04-09 23:43:38,625 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Phylo/PAML/_parse_codeml.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo/PAML
2026-04-09 23:43:38,626 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Phylo/PAML/baseml.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo/PAML
2026-04-09 23:43:38,628 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Phylo/PAML/yn00.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo/PAML
2026-04-09 23:43:38,629 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Phylo/PAML/_parse_yn00.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo/PAML
2026-04-09 23:43:38,630 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Phylo/Newick.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo
2026-04-09 23:43:38,632 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Phylo/PhyloXML.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo
2026-04-09 23:43:38,633 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Phylo/NexusIO.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo
2026-04-09 23:43:38,635 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Phylo/Consensus.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo
2026-04-09 23:43:38,636 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Phylo/_io.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo
2026-04-09 23:43:38,637 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Phylo/BaseTree.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo
2026-04-09 23:43:38,639 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Phylo/_utils.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo
2026-04-09 23:43:38,641 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Phylo/PhyloXMLIO.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo
2026-04-09 23:43:38,642 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Phylo/NewickIO.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo
2026-04-09 23:43:38,644 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Phylo/NeXML.py -> build/bdist.linux-riscv64/wheel/./Bio/Phylo
2026-04-09 23:43:38,645 root INFO creating build/bdist.linux-riscv64/wheel/Bio/codonalign
2026-04-09 23:43:38,646 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/codonalign/codonalignment.py -> build/bdist.linux-riscv64/wheel/./Bio/codonalign
2026-04-09 23:43:38,648 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/codonalign/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/codonalign
2026-04-09 23:43:38,649 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/codonalign/codonseq.py -> build/bdist.linux-riscv64/wheel/./Bio/codonalign
2026-04-09 23:43:38,651 root INFO creating build/bdist.linux-riscv64/wheel/Bio/HMM
2026-04-09 23:43:38,652 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/HMM/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/HMM
2026-04-09 23:43:38,654 root INFO creating build/bdist.linux-riscv64/wheel/Bio/TogoWS
2026-04-09 23:43:38,655 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/TogoWS/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/TogoWS
2026-04-09 23:43:38,656 root INFO creating build/bdist.linux-riscv64/wheel/Bio/SeqUtils
2026-04-09 23:43:38,657 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/SeqUtils/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqUtils
2026-04-09 23:43:38,659 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/SeqUtils/CheckSum.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqUtils
2026-04-09 23:43:38,660 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/SeqUtils/lcc.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqUtils
2026-04-09 23:43:38,661 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/SeqUtils/MeltingTemp.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqUtils
2026-04-09 23:43:38,663 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/SeqUtils/ProtParamData.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqUtils
2026-04-09 23:43:38,664 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/SeqUtils/IsoelectricPoint.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqUtils
2026-04-09 23:43:38,666 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/SeqUtils/ProtParam.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqUtils
2026-04-09 23:43:38,667 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Cluster
2026-04-09 23:43:38,668 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Cluster/_cluster.cpython-314-riscv64-linux-musl.so -> build/bdist.linux-riscv64/wheel/./Bio/Cluster
2026-04-09 23:43:38,670 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Cluster/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/Cluster
2026-04-09 23:43:38,672 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Cluster/cluster.h -> build/bdist.linux-riscv64/wheel/./Bio/Cluster
2026-04-09 23:43:38,673 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Cluster/cluster.c -> build/bdist.linux-riscv64/wheel/./Bio/Cluster
2026-04-09 23:43:38,676 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Cluster/clustermodule.c -> build/bdist.linux-riscv64/wheel/./Bio/Cluster
2026-04-09 23:43:38,678 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Alphabet
2026-04-09 23:43:38,679 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Alphabet/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/Alphabet
2026-04-09 23:43:38,680 root INFO creating build/bdist.linux-riscv64/wheel/Bio/SwissProt
2026-04-09 23:43:38,681 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/SwissProt/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/SwissProt
2026-04-09 23:43:38,683 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/SwissProt/KeyWList.py -> build/bdist.linux-riscv64/wheel/./Bio/SwissProt
2026-04-09 23:43:38,685 root INFO creating build/bdist.linux-riscv64/wheel/Bio/ExPASy
2026-04-09 23:43:38,685 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/ExPASy/cellosaurus.py -> build/bdist.linux-riscv64/wheel/./Bio/ExPASy
2026-04-09 23:43:38,687 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/ExPASy/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/ExPASy
2026-04-09 23:43:38,688 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/ExPASy/Enzyme.py -> build/bdist.linux-riscv64/wheel/./Bio/ExPASy
2026-04-09 23:43:38,689 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/ExPASy/Prodoc.py -> build/bdist.linux-riscv64/wheel/./Bio/ExPASy
2026-04-09 23:43:38,691 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/ExPASy/ScanProsite.py -> build/bdist.linux-riscv64/wheel/./Bio/ExPASy
2026-04-09 23:43:38,692 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/ExPASy/Prosite.py -> build/bdist.linux-riscv64/wheel/./Bio/ExPASy
2026-04-09 23:43:38,694 root INFO creating build/bdist.linux-riscv64/wheel/Bio/SeqIO
2026-04-09 23:43:38,695 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/SeqIO/PdbIO.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqIO
2026-04-09 23:43:38,696 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/SeqIO/Interfaces.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqIO
2026-04-09 23:43:38,697 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/SeqIO/TwoBitIO.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqIO
2026-04-09 23:43:38,699 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/SeqIO/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqIO
2026-04-09 23:43:38,701 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/SeqIO/SffIO.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqIO
2026-04-09 23:43:38,702 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/SeqIO/_twoBitIO.cpython-314-riscv64-linux-musl.so -> build/bdist.linux-riscv64/wheel/./Bio/SeqIO
2026-04-09 23:43:38,704 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/SeqIO/PirIO.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqIO
2026-04-09 23:43:38,705 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/SeqIO/IgIO.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqIO
2026-04-09 23:43:38,706 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/SeqIO/QualityIO.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqIO
2026-04-09 23:43:38,708 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/SeqIO/SeqXmlIO.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqIO
2026-04-09 23:43:38,710 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/SeqIO/AbiIO.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqIO
2026-04-09 23:43:38,712 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/SeqIO/GckIO.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqIO
2026-04-09 23:43:38,713 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/SeqIO/AceIO.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqIO
2026-04-09 23:43:38,714 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/SeqIO/InsdcIO.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqIO
2026-04-09 23:43:38,716 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/SeqIO/_index.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqIO
2026-04-09 23:43:38,718 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/SeqIO/TabIO.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqIO
2026-04-09 23:43:38,719 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/SeqIO/GfaIO.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqIO
2026-04-09 23:43:38,720 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/SeqIO/FastaIO.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqIO
2026-04-09 23:43:38,722 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/SeqIO/SnapGeneIO.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqIO
2026-04-09 23:43:38,723 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/SeqIO/NibIO.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqIO
2026-04-09 23:43:38,725 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/SeqIO/SwissIO.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqIO
2026-04-09 23:43:38,726 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/SeqIO/PhdIO.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqIO
2026-04-09 23:43:38,727 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/SeqIO/XdnaIO.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqIO
2026-04-09 23:43:38,729 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/SeqIO/_twoBitIO.c -> build/bdist.linux-riscv64/wheel/./Bio/SeqIO
2026-04-09 23:43:38,730 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/SeqIO/UniprotIO.py -> build/bdist.linux-riscv64/wheel/./Bio/SeqIO
2026-04-09 23:43:38,732 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Compass
2026-04-09 23:43:38,733 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Compass/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/Compass
2026-04-09 23:43:38,735 root INFO creating build/bdist.linux-riscv64/wheel/Bio/PopGen
2026-04-09 23:43:38,736 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/PopGen/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/PopGen
2026-04-09 23:43:38,737 root INFO creating build/bdist.linux-riscv64/wheel/Bio/PopGen/GenePop
2026-04-09 23:43:38,738 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/PopGen/GenePop/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/PopGen/GenePop
2026-04-09 23:43:38,739 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/PopGen/GenePop/FileParser.py -> build/bdist.linux-riscv64/wheel/./Bio/PopGen/GenePop
2026-04-09 23:43:38,741 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/PopGen/GenePop/LargeFileParser.py -> build/bdist.linux-riscv64/wheel/./Bio/PopGen/GenePop
2026-04-09 23:43:38,742 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Entrez
2026-04-09 23:43:38,743 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/Entrez
2026-04-09 23:43:38,745 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/Parser.py -> build/bdist.linux-riscv64/wheel/./Bio/Entrez
2026-04-09 23:43:38,747 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Entrez/XSDs
2026-04-09 23:43:38,748 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/XSDs/NCBI_BlastOutput2.xsd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/XSDs
2026-04-09 23:43:38,749 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/XSDs/NCBI_BlastOutput2.mod.xsd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/XSDs
2026-04-09 23:43:38,750 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/XSDs/IPGReportSet.xsd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/XSDs
2026-04-09 23:43:38,753 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Entrez/DTDs
2026-04-09 23:43:38,754 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/Docsum_3_4.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,755 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/NCBI_ID2Access.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,756 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/NCBI_Seqloc.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,758 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/bookdoc_120101.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,759 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/format.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,760 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/Docsum_3_2.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,762 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/NCBI_ScoreMat.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,763 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/taxon.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,764 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/JATS-format1-3.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,766 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/mathmlsetup.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,767 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/NCBI_FeatDef.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,769 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/JATS-list1-3.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,770 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/NCBI_Seqset.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,771 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/common.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,774 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/NCBI_GBSeq.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,775 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/Docsum_3_2.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,777 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/Docsum_3_4.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,779 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/nlmmedlinecitationset_130501.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,780 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/NCBI_Sequence.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,782 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/NCBI_Cdd.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,783 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/NCBI_BioTree.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,784 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/isopub.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,786 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/mathml-in-pubmed.mod -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,787 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/NCBI_SeqTable.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,788 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/Docsum_3_0.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,790 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/NCBI_Organism.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,791 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/MMDB.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,792 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/NCBI_Seq_split.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,794 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/pubmed_090101.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,795 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/references.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,797 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/NCBI_TxInit.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,798 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/NCBI_Medlars.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,799 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/BITS-question-answer2.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,801 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/isocyr1.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,802 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/pubmed_150101.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,803 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/chars.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,805 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/math.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,806 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/pubmed_180101.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,808 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/NCBI_General.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,809 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/NCBI_Mim.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,810 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/MMDB_Chemical_graph.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,812 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/default-mixes.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,813 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/NCBI_Blast4.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,815 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/JATS-link1-3.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,816 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/esearch.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,818 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/EMBL_General.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,819 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/bookdoc_150101.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,820 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/NCBI_ID1Access.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,821 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/NCBI_Seqloc.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,823 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/nlmmedline_090101.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,824 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/NCBI_Remap.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,825 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/JATS-mathml3-mathmlsetup1-3.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,827 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/JATS-common1-3.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,830 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/eSummary_041029.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,831 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/nlmcommon_080101.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,833 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/nlmcatalogrecordset_170601.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,834 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/NCBI_Sequence.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,835 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/XHTMLtablesetup.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,837 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/JATS-notat1-3.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,838 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/isoamsc.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,840 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/NCBI_BlastDL.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,841 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/nlmmedlinecitationset_120101.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,842 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/NCBI_Access.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,843 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/pubmed_100101.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,845 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/htmltable.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,846 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/phrase.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,847 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/eInfo_020511.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,849 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/GenBank_General.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,850 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/MMDB_Structural_model.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,851 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/NCBI_Seq_split.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,853 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/PIR_General.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,854 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/NCBI_BioSource.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,855 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/elink.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,856 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/PRF_General.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,858 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/JATS-journalmeta1-3.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,859 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/nlmsharedcatcit_080101.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,860 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/JATS-default-classes1-3.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,862 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/pubmed_130501.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,864 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/bookdoc_100301.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,865 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/NCBI_Protein.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,866 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/EMBL_General.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,867 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/nlmmedlinecitationset_140101.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,869 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/archivearticle.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,871 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/xmlspecchars.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,872 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/xhtml-table-1.mod -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,874 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/JATS-math1-3.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,875 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/nlmmedlinecitation_080101.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,877 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/isomfrk.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,878 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/nlmcommon_011101.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,879 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/JATS-common-atts1-3.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,881 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/NCBI_Seqalign.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,882 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/NCBI_ID1Access.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,884 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/NCBI_all.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,885 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/eSearch_020511.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
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2026-04-09 23:43:38,888 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/isotech.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
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2026-04-09 23:43:38,897 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/isoamsa.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
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2026-04-09 23:43:38,905 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/mmlalias.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
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2026-04-09 23:43:38,911 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/NCBI_Variation.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,912 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/isocyr2.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,914 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/GenBank_General.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
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2026-04-09 23:43:38,919 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/JATS-phrase1-3.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,921 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/NCBI_Seqfeat.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,922 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/NCBI_Project.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
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2026-04-09 23:43:38,938 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/isomopf.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:38,939 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/NCBI_General.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
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2026-04-09 23:43:38,954 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/NCBI_MedArchive.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
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2026-04-09 23:43:38,958 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/isonum.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
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2026-04-09 23:43:38,966 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/backmatter.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
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2026-04-09 23:43:39,037 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/NCBI_Blast4.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,039 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/NCBI_Cn3d.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,040 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/PDB_General.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,041 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/JATS-funding1-3.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,043 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/ePost_020511.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,044 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/JATS-xmlspecchars1-3.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,046 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/JATS-ali-namespace1-3.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,047 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/nlmmedlinecitationset_150101.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,049 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/default-classes.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,050 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/NCBI_Mime.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,052 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/isolat1.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,053 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/NCBI_ObjPrt.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,054 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/NCBI_Cn3d.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,056 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/isoamso.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,057 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/JATS-modules1-3.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,059 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/JATS-nlmcitation1-3.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,061 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/isoamsb.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,062 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/NCBI_Submit.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,063 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/xhtml-inlstyle-1.mod -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,064 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/HomoloGene.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,066 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/modules.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,067 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/nlm-articleset-2.0.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,069 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/JATS-archivecustom-mixes1-3.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,070 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/JATS-backmatter1-3.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,072 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/HomoloGene.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,073 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/SP_General.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,074 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/mathml2-qname-1.mod -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,076 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/NCBI_PubMed.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,077 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/NCBI_Remap.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,079 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/OMSSA.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,080 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/NCBI_Access.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,081 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/isogrk4.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,082 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/PRF_General.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,084 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/NCBI_Biblio.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,085 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/pubmed_120101.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,086 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/NSE.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,088 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/NCBI_Project.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,089 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/JATS-chars1-3.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,090 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/NCBI_PCSubstance.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,092 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/Docsum_3_3.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,093 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/NCBI_Gene.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,095 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/NCBI_PCAssay.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,096 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/JATS-section1-3.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,097 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/NCBI_Seqset.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,099 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/NCBI_Seqres.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,100 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/mathml3-qname1.mod -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,102 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/SP_General.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,103 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/pubmed_080101.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,104 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/NCBI_ID2Access.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,106 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/MMDB.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,107 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/NSE.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,109 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/JATS-display1-3.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,110 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/NCBI_TSeq.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,112 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/eLink_101123.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,113 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/esummary_clinvar.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,114 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/para.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,116 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/Docsum_3_1.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,118 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/NCBI_Organism.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,119 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/JATS-related-object1-3.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,120 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/JATS-mathml3-modules1-3.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,122 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/NCBI_Mim.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,123 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/NCBI_Pub.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,124 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/NCBI_Entrezgene.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,126 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/mathml2.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,127 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/NCBI_Medline.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,129 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/einfo.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,130 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/nlmcommon_090101.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,131 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/JATS-archivecustom-modules1-3.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,133 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/bookdoc_130101.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,134 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/NCBI_Submit.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,135 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/NCBI_Pub.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,137 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/notat.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,138 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/JATS-default-mixes1-3.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,140 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/pmc-1.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,141 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/NCBI_ScoreMat.mod.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,143 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/esummary-v1.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,144 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/pubmed_180601.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,145 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/Docsum_3_1.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,147 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/archivecustom-modules.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,148 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/JATS-para1-3.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,150 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/NCBI_Entrezgene.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,151 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/journalmeta.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,153 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/isogrk2.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,154 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/archivecustom-mixes.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,155 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/pubmed_190101.dtd -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,157 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Entrez/DTDs/isolat2.ent -> build/bdist.linux-riscv64/wheel/./Bio/Entrez/DTDs
2026-04-09 23:43:39,158 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/_utils.py -> build/bdist.linux-riscv64/wheel/./Bio
2026-04-09 23:43:39,160 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Pathway
2026-04-09 23:43:39,161 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Pathway/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/Pathway
2026-04-09 23:43:39,162 root INFO creating build/bdist.linux-riscv64/wheel/Bio/Pathway/Rep
2026-04-09 23:43:39,163 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Pathway/Rep/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/Pathway/Rep
2026-04-09 23:43:39,165 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Pathway/Rep/Graph.py -> build/bdist.linux-riscv64/wheel/./Bio/Pathway/Rep
2026-04-09 23:43:39,166 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/Pathway/Rep/MultiGraph.py -> build/bdist.linux-riscv64/wheel/./Bio/Pathway/Rep
2026-04-09 23:43:39,167 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/pairwise2.py -> build/bdist.linux-riscv64/wheel/./Bio
2026-04-09 23:43:39,169 root INFO creating build/bdist.linux-riscv64/wheel/Bio/PDB
2026-04-09 23:43:39,170 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/PDB/ccealign.cpython-314-riscv64-linux-musl.so -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2026-04-09 23:43:39,172 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/PDB/Structure.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2026-04-09 23:43:39,173 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/PDB/Model.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2026-04-09 23:43:39,174 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/PDB/Selection.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2026-04-09 23:43:39,176 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/PDB/FragmentMapper.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2026-04-09 23:43:39,177 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/PDB/kdtrees.c -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2026-04-09 23:43:39,179 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/PDB/PDBExceptions.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2026-04-09 23:43:39,180 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/PDB/StructureAlignment.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2026-04-09 23:43:39,181 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/PDB/DSSP.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2026-04-09 23:43:39,183 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/PDB/ic_rebuild.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2026-04-09 23:43:39,184 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/PDB/__init__.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2026-04-09 23:43:39,185 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/PDB/MMCIFParser.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2026-04-09 23:43:39,187 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/PDB/MMCIF2Dict.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2026-04-09 23:43:39,188 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/PDB/qcprot.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2026-04-09 23:43:39,190 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/PDB/PDBParser.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2026-04-09 23:43:39,191 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/PDB/Entity.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2026-04-09 23:43:39,193 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/PDB/ccealignmodule.c -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2026-04-09 23:43:39,194 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/PDB/Dice.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2026-04-09 23:43:39,195 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/PDB/Atom.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2026-04-09 23:43:39,197 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/PDB/mmcifio.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2026-04-09 23:43:39,198 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/PDB/vectors.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
2026-04-09 23:43:39,200 root INFO copying build/lib.linux-riscv64-cpython-314/Bio/PDB/PDBIO.py -> build/bdist.linux-riscv64/wheel/./Bio/PDB
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2026-04-09 23:43:40,424 wheel INFO adding 'biopython-1.86.dist-info/WHEEL'
2026-04-09 23:43:40,425 wheel INFO adding 'biopython-1.86.dist-info/top_level.txt'
2026-04-09 23:43:40,434 wheel INFO adding 'biopython-1.86.dist-info/RECORD'
2026-04-09 23:43:40,441 root INFO removing build/bdist.linux-riscv64/wheel
2026-04-09 23:43:40,522 gpep517 INFO The backend produced .dist/biopython-1.86-cp314-cp314-linux_riscv64.whl
biopython-1.86-cp314-cp314-linux_riscv64.whl
>>> py3-biopython: Entering fakeroot...
>>> py3-biopython-pyc*: Running split function pyc...
'usr/lib/python3.14/site-packages/BioSQL/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/BioSQL/__pycache__'
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'usr/lib/python3.14/site-packages/Bio/Align/substitution_matrices/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/Align/substitution_matrices/__pycache__'
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'usr/lib/python3.14/site-packages/Bio/SearchIO/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/SearchIO/__pycache__'
'usr/lib/python3.14/site-packages/Bio/SearchIO/_model/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/SearchIO/_model/__pycache__'
'usr/lib/python3.14/site-packages/Bio/SearchIO/ExonerateIO/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/SearchIO/ExonerateIO/__pycache__'
'usr/lib/python3.14/site-packages/Bio/SearchIO/InfernalIO/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/SearchIO/InfernalIO/__pycache__'
'usr/lib/python3.14/site-packages/Bio/Blast/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/Blast/__pycache__'
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'usr/lib/python3.14/site-packages/Bio/UniProt/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/UniProt/__pycache__'
'usr/lib/python3.14/site-packages/Bio/SCOP/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/SCOP/__pycache__'
'usr/lib/python3.14/site-packages/Bio/UniGene/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/UniGene/__pycache__'
'usr/lib/python3.14/site-packages/Bio/motifs/jaspar/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/motifs/jaspar/__pycache__'
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'usr/lib/python3.14/site-packages/Bio/KEGG/KGML/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/KEGG/KGML/__pycache__'
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'usr/lib/python3.14/site-packages/Bio/Phylo/PAML/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/Phylo/PAML/__pycache__'
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'usr/lib/python3.14/site-packages/Bio/codonalign/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/codonalign/__pycache__'
'usr/lib/python3.14/site-packages/Bio/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/__pycache__'
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'usr/lib/python3.14/site-packages/Bio/TogoWS/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/TogoWS/__pycache__'
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'usr/lib/python3.14/site-packages/Bio/SwissProt/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/SwissProt/__pycache__'
'usr/lib/python3.14/site-packages/Bio/ExPASy/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/ExPASy/__pycache__'
'usr/lib/python3.14/site-packages/Bio/SeqIO/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/SeqIO/__pycache__'
'usr/lib/python3.14/site-packages/Bio/Compass/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/Compass/__pycache__'
'usr/lib/python3.14/site-packages/Bio/PopGen/GenePop/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/PopGen/GenePop/__pycache__'
'usr/lib/python3.14/site-packages/Bio/PopGen/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/PopGen/__pycache__'
'usr/lib/python3.14/site-packages/Bio/Entrez/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/Entrez/__pycache__'
'usr/lib/python3.14/site-packages/Bio/Pathway/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/Pathway/__pycache__'
'usr/lib/python3.14/site-packages/Bio/Pathway/Rep/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/Pathway/Rep/__pycache__'
'usr/lib/python3.14/site-packages/Bio/PDB/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/PDB/__pycache__'
'usr/lib/python3.14/site-packages/Bio/PDB/mmtf/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/PDB/mmtf/__pycache__'
'usr/lib/python3.14/site-packages/Bio/CAPS/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/CAPS/__pycache__'
'usr/lib/python3.14/site-packages/Bio/Emboss/__pycache__' -> '/home/buildozer/aports/community/py3-biopython/pkg/py3-biopython-pyc/usr/lib/python3.14/site-packages/Bio/Emboss/__pycache__'
>>> py3-biopython-pyc*: Preparing subpackage py3-biopython-pyc...
>>> py3-biopython-pyc*: Running postcheck for py3-biopython-pyc
>>> py3-biopython*: Running postcheck for py3-biopython
>>> py3-biopython*: Preparing package py3-biopython...
>>> py3-biopython*: Stripping binaries
>>> py3-biopython*: Scanning shared objects
>>> py3-biopython-pyc*: Tracing dependencies...
	python3~3.14
>>> py3-biopython-pyc*: Package size: 6.2 MB
>>> py3-biopython-pyc*: Compressing data...
>>> py3-biopython-pyc*: Create checksum...
>>> py3-biopython-pyc*: Create py3-biopython-pyc-1.86-r1.apk
>>> py3-biopython*: Tracing dependencies...
	py3-numpy
	python3
	python3~3.14
	so:libc.musl-riscv64.so.1
>>> py3-biopython*: Package size: 10.7 MB
>>> py3-biopython*: Compressing data...
>>> py3-biopython*: Create checksum...
>>> py3-biopython*: Create py3-biopython-1.86-r1.apk
>>> py3-biopython: Build complete at Thu, 09 Apr 2026 23:43:56 +0000 elapsed time 0h 1m 54s
>>> py3-biopython: Cleaning up srcdir
>>> py3-biopython: Cleaning up pkgdir
>>> py3-biopython: Cleaning up tmpdir
>>> py3-biopython: Uninstalling dependencies...
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Executing busybox-1.37.0-r31.trigger
OK: 390.9 MiB in 105 packages
>>> py3-biopython: Updating the community/riscv64 repository index...
>>> py3-biopython: Signing the index...